####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS458_3 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS458_3.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 33 8 - 40 4.99 7.62 LONGEST_CONTINUOUS_SEGMENT: 33 9 - 41 4.70 7.79 LCS_AVERAGE: 75.49 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 1 - 17 1.94 17.55 LCS_AVERAGE: 34.86 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 2 - 16 0.94 18.37 LCS_AVERAGE: 24.99 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 17 21 3 3 4 4 11 16 16 17 17 18 22 24 25 28 29 30 33 34 34 36 LCS_GDT Q 2 Q 2 15 17 21 6 11 14 15 15 16 16 17 17 18 22 24 25 28 29 32 33 35 37 38 LCS_GDT E 3 E 3 15 17 21 7 12 14 15 15 16 16 17 17 18 22 25 27 29 33 34 35 36 37 38 LCS_GDT T 4 T 4 15 17 21 7 12 14 15 15 16 16 17 17 18 22 24 25 28 29 32 33 35 37 38 LCS_GDT R 5 R 5 15 17 21 7 12 14 15 15 16 16 17 17 18 20 24 25 28 29 30 33 35 37 38 LCS_GDT K 6 K 6 15 17 21 7 12 14 15 15 16 16 17 17 21 22 26 27 29 33 34 35 36 37 38 LCS_GDT K 7 K 7 15 17 21 7 12 14 15 15 16 16 17 20 21 23 26 27 31 33 34 35 36 37 38 LCS_GDT C 8 C 8 15 17 33 7 12 14 15 15 16 16 17 17 18 22 24 25 28 31 34 35 36 37 38 LCS_GDT T 9 T 9 15 17 33 7 12 14 15 15 16 16 17 20 21 22 26 27 29 33 34 35 36 37 38 LCS_GDT E 10 E 10 15 17 33 6 12 14 15 15 16 17 19 21 23 24 28 31 32 33 34 35 36 37 38 LCS_GDT M 11 M 11 15 17 33 6 12 14 15 15 16 16 17 17 21 24 28 31 32 33 34 35 36 37 38 LCS_GDT K 12 K 12 15 17 33 7 12 14 15 15 16 17 19 20 21 23 28 31 32 33 34 35 36 37 38 LCS_GDT K 13 K 13 15 17 33 5 12 14 15 15 16 16 19 21 23 24 28 31 32 33 34 35 36 37 38 LCS_GDT K 14 K 14 15 17 33 5 12 14 15 15 16 16 17 21 23 24 28 31 32 33 34 35 36 37 38 LCS_GDT F 15 F 15 15 17 33 4 10 14 15 15 16 16 17 17 18 24 28 31 32 33 34 35 36 37 38 LCS_GDT K 16 K 16 15 17 33 4 7 14 15 15 16 16 19 21 23 24 28 31 32 33 34 35 36 37 38 LCS_GDT N 17 N 17 4 17 33 3 3 6 8 12 14 15 17 21 23 24 28 31 32 33 34 35 36 37 38 LCS_GDT C 18 C 18 6 8 33 3 5 6 8 8 10 14 15 18 22 24 27 31 32 33 34 35 36 37 38 LCS_GDT E 19 E 19 6 8 33 3 5 6 8 8 10 14 15 18 22 24 28 31 32 33 34 35 36 37 38 LCS_GDT V 20 V 20 6 8 33 4 5 6 8 8 10 14 15 18 23 24 28 31 32 33 34 35 36 37 38 LCS_GDT R 21 R 21 6 8 33 4 5 6 8 8 10 14 15 18 23 24 28 31 32 33 34 35 36 37 38 LCS_GDT C 22 C 22 6 8 33 4 5 6 8 8 11 15 17 21 23 24 28 31 32 33 34 35 36 37 38 LCS_GDT D 23 D 23 6 8 33 4 5 6 8 8 8 11 13 16 22 24 28 31 32 33 34 35 36 37 37 LCS_GDT E 24 E 24 3 12 33 3 3 5 8 8 13 16 17 21 23 24 28 31 32 33 34 35 36 37 37 LCS_GDT S 25 S 25 11 15 33 5 9 11 12 14 16 17 19 21 23 24 28 31 32 33 34 35 36 37 38 LCS_GDT N 26 N 26 11 15 33 5 9 11 12 14 16 17 19 21 23 24 28 31 32 33 34 35 36 37 38 LCS_GDT H 27 H 27 11 15 33 5 9 11 12 14 16 17 19 21 23 24 28 31 32 33 34 35 36 37 38 LCS_GDT C 28 C 28 11 15 33 4 9 11 12 14 16 17 19 21 23 24 28 31 32 33 34 35 36 37 38 LCS_GDT V 29 V 29 11 15 33 3 9 11 12 14 16 17 19 21 23 24 28 31 32 33 34 35 36 37 38 LCS_GDT E 30 E 30 11 15 33 5 9 11 12 14 16 17 19 21 23 24 28 31 32 33 34 35 36 37 38 LCS_GDT V 31 V 31 11 15 33 5 9 11 12 14 16 17 19 21 23 24 28 31 32 33 34 35 36 37 38 LCS_GDT R 32 R 32 11 15 33 3 8 11 12 14 16 17 19 21 23 24 28 31 32 33 34 35 36 37 38 LCS_GDT C 33 C 33 11 15 33 4 9 11 12 14 16 17 19 21 23 24 28 31 32 33 34 35 36 37 38 LCS_GDT S 34 S 34 11 15 33 3 6 11 12 14 16 17 19 21 23 24 28 31 32 33 34 35 36 37 38 LCS_GDT D 35 D 35 11 15 33 4 9 11 12 14 16 17 19 21 23 24 28 31 32 33 34 35 36 37 38 LCS_GDT T 36 T 36 5 15 33 5 5 6 6 9 14 15 17 20 21 23 27 30 32 33 34 35 36 37 38 LCS_GDT K 37 K 37 5 15 33 5 5 6 6 12 16 17 19 21 23 24 28 31 32 33 34 35 36 37 38 LCS_GDT Y 38 Y 38 5 15 33 5 5 7 12 14 16 17 19 21 23 24 28 31 32 33 34 35 36 37 38 LCS_GDT T 39 T 39 5 15 33 5 5 6 8 14 16 17 19 21 23 24 28 31 32 33 34 35 36 37 38 LCS_GDT L 40 L 40 5 6 33 5 5 6 6 8 13 17 19 20 22 24 28 31 32 33 34 35 36 37 38 LCS_GDT C 41 C 41 3 6 33 3 3 5 5 7 7 9 14 15 19 24 28 31 32 33 34 35 36 37 38 LCS_AVERAGE LCS_A: 45.11 ( 24.99 34.86 75.49 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 12 14 15 15 16 17 19 21 23 24 28 31 32 33 34 35 36 37 38 GDT PERCENT_AT 17.07 29.27 34.15 36.59 36.59 39.02 41.46 46.34 51.22 56.10 58.54 68.29 75.61 78.05 80.49 82.93 85.37 87.80 90.24 92.68 GDT RMS_LOCAL 0.28 0.66 0.84 0.94 0.94 1.28 2.11 2.45 2.97 3.37 3.47 4.06 4.36 4.46 4.63 4.83 5.03 5.28 5.45 5.96 GDT RMS_ALL_AT 18.22 18.57 18.57 18.37 18.37 18.43 7.56 7.59 8.30 8.36 8.21 8.25 8.06 8.00 7.76 7.59 7.37 7.11 7.01 6.64 # Checking swapping # possible swapping detected: E 3 E 3 # possible swapping detected: E 19 E 19 # possible swapping detected: E 24 E 24 # possible swapping detected: E 30 E 30 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 20.895 0 0.042 0.670 22.943 0.000 0.000 22.742 LGA Q 2 Q 2 16.475 0 0.252 0.928 21.380 0.000 0.000 21.380 LGA E 3 E 3 11.920 0 0.080 1.219 15.064 0.000 0.000 15.064 LGA T 4 T 4 14.462 0 0.026 1.271 19.424 0.000 0.000 17.608 LGA R 5 R 5 14.331 0 0.031 1.126 23.978 0.000 0.000 22.200 LGA K 6 K 6 9.050 0 0.036 1.157 11.147 0.000 0.000 8.882 LGA K 7 K 7 6.909 0 0.057 0.683 9.754 0.000 0.000 8.669 LGA C 8 C 8 9.964 0 0.035 0.647 12.480 0.000 0.000 12.428 LGA T 9 T 9 7.296 0 0.023 1.052 9.636 3.182 1.818 9.636 LGA E 10 E 10 1.075 0 0.016 0.992 3.757 40.455 35.354 3.036 LGA M 11 M 11 5.507 0 0.078 1.029 9.057 2.727 1.364 6.954 LGA K 12 K 12 4.093 0 0.030 0.762 10.286 31.818 14.141 10.286 LGA K 13 K 13 3.473 0 0.054 0.316 12.016 21.364 9.495 12.016 LGA K 14 K 14 7.733 0 0.054 0.631 10.468 0.000 0.000 8.680 LGA F 15 F 15 8.942 0 0.477 1.451 15.276 0.000 0.000 15.276 LGA K 16 K 16 4.391 0 0.680 1.116 5.621 4.091 23.434 4.665 LGA N 17 N 17 6.466 0 0.635 0.564 9.238 0.000 0.000 5.981 LGA C 18 C 18 9.803 0 0.049 0.789 12.629 0.000 0.000 12.629 LGA E 19 E 19 8.274 0 0.261 0.862 14.396 0.000 0.000 14.396 LGA V 20 V 20 7.957 0 0.126 1.068 11.410 0.000 0.000 7.706 LGA R 21 R 21 7.456 0 0.059 1.182 16.202 0.000 0.000 16.202 LGA C 22 C 22 6.655 0 0.023 0.815 9.576 0.000 0.000 9.576 LGA D 23 D 23 7.975 0 0.638 0.555 11.601 0.000 0.000 11.601 LGA E 24 E 24 5.825 0 0.653 0.993 9.418 4.091 1.818 8.437 LGA S 25 S 25 1.423 0 0.595 0.558 4.792 52.273 36.970 4.792 LGA N 26 N 26 1.477 0 0.064 1.165 4.656 61.818 38.864 4.656 LGA H 27 H 27 1.718 0 0.385 1.127 5.073 61.818 34.182 5.073 LGA C 28 C 28 1.281 0 0.072 0.758 1.799 54.545 55.758 1.746 LGA V 29 V 29 1.651 0 0.138 0.845 4.080 58.182 48.831 4.080 LGA E 30 E 30 0.734 0 0.029 0.801 3.546 81.818 63.232 3.546 LGA V 31 V 31 0.902 0 0.071 1.018 2.916 77.727 69.351 2.916 LGA R 32 R 32 1.788 0 0.188 1.365 7.453 41.364 17.355 7.453 LGA C 33 C 33 1.663 0 0.118 0.110 2.338 55.455 49.697 2.338 LGA S 34 S 34 2.335 0 0.097 0.629 5.767 55.000 38.485 5.767 LGA D 35 D 35 0.915 0 0.640 1.113 4.424 70.000 49.545 3.320 LGA T 36 T 36 5.312 0 0.258 1.184 8.729 3.182 1.818 8.729 LGA K 37 K 37 3.608 0 0.047 1.635 4.449 26.364 15.354 3.866 LGA Y 38 Y 38 1.874 0 0.037 0.491 8.360 47.727 19.091 8.360 LGA T 39 T 39 2.324 0 0.077 1.162 4.948 25.000 20.000 3.731 LGA L 40 L 40 4.159 0 0.593 0.752 5.139 6.818 4.091 4.901 LGA C 41 C 41 6.119 0 0.484 1.027 9.742 0.000 0.000 9.742 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 6.611 6.397 7.799 21.630 15.855 4.834 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 19 2.45 48.780 45.268 0.746 LGA_LOCAL RMSD: 2.445 Number of atoms: 19 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 7.592 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 6.611 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.904439 * X + 0.256602 * Y + 0.340802 * Z + 1.633445 Y_new = 0.356176 * X + -0.014518 * Y + -0.934306 * Z + 1.077236 Z_new = -0.234798 * X + 0.966408 * Y + -0.104526 * Z + -1.144197 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.375157 0.237010 1.678537 [DEG: 21.4949 13.5797 96.1731 ] ZXZ: 0.349767 1.675513 -0.238341 [DEG: 20.0402 95.9998 -13.6559 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS458_3 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS458_3.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 19 2.45 45.268 6.61 REMARK ---------------------------------------------------------- MOLECULE T0955TS458_3 PFRMAT TS TARGET T0955 MODEL 3 PARENT N/A ATOM 1 CB SER 1 13.369 -0.239 -7.664 1.00 2.79 C ATOM 2 OG SER 1 13.870 -1.421 -7.056 1.00 2.79 O ATOM 4 C SER 1 10.985 -1.028 -7.817 1.00 2.79 C ATOM 5 O SER 1 10.423 -0.266 -7.020 1.00 2.79 O ATOM 8 N SER 1 11.848 0.681 -9.393 1.00 2.79 N ATOM 10 CA SER 1 12.202 -0.540 -8.616 1.00 2.79 C ATOM 11 N GLN 2 10.571 -2.282 -8.060 1.00 2.35 N ATOM 13 CA GLN 2 9.428 -2.921 -7.372 1.00 2.35 C ATOM 14 CB GLN 2 8.994 -4.207 -8.075 1.00 2.35 C ATOM 15 CG GLN 2 8.363 -4.002 -9.449 1.00 2.35 C ATOM 16 CD GLN 2 7.952 -5.307 -10.102 1.00 2.35 C ATOM 17 OE1 GLN 2 8.729 -5.918 -10.835 1.00 2.35 O ATOM 18 NE2 GLN 2 6.724 -5.742 -9.839 1.00 2.35 N ATOM 21 C GLN 2 9.704 -3.216 -5.891 1.00 2.35 C ATOM 22 O GLN 2 8.843 -2.967 -5.041 1.00 2.35 O ATOM 23 N GLU 3 10.917 -3.711 -5.600 1.00 3.00 N ATOM 25 CA GLU 3 11.368 -4.056 -4.238 1.00 3.00 C ATOM 26 CB GLU 3 12.678 -4.851 -4.280 1.00 3.00 C ATOM 27 CG GLU 3 12.554 -6.259 -4.856 1.00 3.00 C ATOM 28 CD GLU 3 13.876 -7.005 -4.872 1.00 3.00 C ATOM 29 OE1 GLU 3 14.603 -6.907 -5.883 1.00 3.00 O ATOM 30 OE2 GLU 3 14.187 -7.691 -3.876 1.00 3.00 O ATOM 31 C GLU 3 11.534 -2.821 -3.339 1.00 3.00 C ATOM 32 O GLU 3 11.065 -2.830 -2.198 1.00 3.00 O ATOM 33 N THR 4 12.159 -1.761 -3.876 1.00 3.40 N ATOM 35 CA THR 4 12.395 -0.492 -3.156 1.00 3.40 C ATOM 36 CB THR 4 13.425 0.416 -3.906 1.00 3.40 C ATOM 37 OG1 THR 4 14.373 -0.410 -4.595 1.00 3.40 O ATOM 39 CG2 THR 4 14.202 1.309 -2.922 1.00 3.40 C ATOM 40 C THR 4 11.072 0.269 -2.895 1.00 3.40 C ATOM 41 O THR 4 10.897 0.825 -1.803 1.00 3.40 O ATOM 42 N ARG 5 10.153 0.264 -3.877 1.00 2.35 N ATOM 44 CA ARG 5 8.841 0.932 -3.754 1.00 2.35 C ATOM 45 CB ARG 5 8.154 1.130 -5.125 1.00 2.35 C ATOM 46 CG ARG 5 7.545 -0.103 -5.815 1.00 2.35 C ATOM 47 CD ARG 5 6.915 0.239 -7.166 1.00 2.35 C ATOM 48 NE ARG 5 7.906 0.611 -8.181 1.00 2.35 N ATOM 50 CZ ARG 5 7.627 0.931 -9.445 1.00 2.35 C ATOM 51 NH1 ARG 5 8.614 1.251 -10.271 1.00 2.35 N ATOM 54 NH2 ARG 5 6.375 0.937 -9.895 1.00 2.35 N ATOM 57 C ARG 5 7.922 0.226 -2.734 1.00 2.35 C ATOM 58 O ARG 5 7.254 0.891 -1.937 1.00 2.35 O ATOM 59 N LYS 6 7.926 -1.118 -2.768 1.00 2.68 N ATOM 61 CA LYS 6 7.136 -1.976 -1.862 1.00 2.68 C ATOM 62 CB LYS 6 7.108 -3.427 -2.355 1.00 2.68 C ATOM 63 CG LYS 6 6.153 -3.679 -3.516 1.00 2.68 C ATOM 64 CD LYS 6 6.193 -5.139 -3.957 1.00 2.68 C ATOM 65 CE LYS 6 5.256 -5.414 -5.131 1.00 2.68 C ATOM 66 NZ LYS 6 3.809 -5.314 -4.777 1.00 2.68 N ATOM 70 C LYS 6 7.650 -1.903 -0.413 1.00 2.68 C ATOM 71 O LYS 6 6.849 -1.843 0.525 1.00 2.68 O ATOM 72 N LYS 7 8.982 -1.872 -0.256 1.00 3.48 N ATOM 74 CA LYS 7 9.668 -1.775 1.049 1.00 3.48 C ATOM 75 CB LYS 7 11.165 -2.063 0.894 1.00 3.48 C ATOM 76 CG LYS 7 11.515 -3.544 0.843 1.00 3.48 C ATOM 77 CD LYS 7 13.019 -3.752 0.687 1.00 3.48 C ATOM 78 CE LYS 7 13.393 -5.232 0.633 1.00 3.48 C ATOM 79 NZ LYS 7 12.929 -5.921 -0.608 1.00 3.48 N ATOM 83 C LYS 7 9.467 -0.403 1.716 1.00 3.48 C ATOM 84 O LYS 7 9.192 -0.334 2.921 1.00 3.48 O ATOM 85 N CYS 8 9.559 0.666 0.908 1.00 2.88 N ATOM 87 CA CYS 8 9.395 2.062 1.355 1.00 2.88 C ATOM 88 CB CYS 8 9.861 3.045 0.266 1.00 2.88 C ATOM 89 SG CYS 8 8.761 3.265 -1.156 1.00 2.88 S ATOM 90 C CYS 8 7.947 2.359 1.785 1.00 2.88 C ATOM 91 O CYS 8 7.725 2.985 2.830 1.00 2.88 O ATOM 92 N THR 9 6.983 1.856 0.996 1.00 2.55 N ATOM 94 CA THR 9 5.540 2.024 1.252 1.00 2.55 C ATOM 95 CB THR 9 4.668 1.695 -0.022 1.00 2.55 C ATOM 96 OG1 THR 9 3.328 2.159 0.186 1.00 2.55 O ATOM 98 CG2 THR 9 4.627 0.201 -0.340 1.00 2.55 C ATOM 99 C THR 9 5.071 1.248 2.503 1.00 2.55 C ATOM 100 O THR 9 4.278 1.768 3.295 1.00 2.55 O ATOM 101 N GLU 10 5.618 0.035 2.683 1.00 3.39 N ATOM 103 CA GLU 10 5.311 -0.855 3.819 1.00 3.39 C ATOM 104 CB GLU 10 5.865 -2.264 3.575 1.00 3.39 C ATOM 105 CG GLU 10 4.979 -3.142 2.700 1.00 3.39 C ATOM 106 CD GLU 10 5.557 -4.527 2.479 1.00 3.39 C ATOM 107 OE1 GLU 10 5.259 -5.434 3.286 1.00 3.39 O ATOM 108 OE2 GLU 10 6.308 -4.710 1.498 1.00 3.39 O ATOM 109 C GLU 10 5.817 -0.303 5.161 1.00 3.39 C ATOM 110 O GLU 10 5.080 -0.338 6.153 1.00 3.39 O ATOM 111 N MET 11 7.046 0.241 5.175 1.00 3.64 N ATOM 113 CA MET 11 7.650 0.827 6.388 1.00 3.64 C ATOM 114 CG MET 11 9.715 1.904 5.137 1.00 3.64 C ATOM 115 SD MET 11 11.513 2.095 5.175 1.00 3.64 S ATOM 116 CE MET 11 12.025 0.918 3.912 1.00 3.64 C ATOM 117 C MET 11 6.958 2.126 6.851 1.00 3.64 C ATOM 118 O MET 11 6.715 2.294 8.051 1.00 3.64 O ATOM 119 CB MET 11 9.183 1.001 6.261 1.00 3.64 C ATOM 120 N LYS 12 6.631 3.016 5.898 1.00 2.83 N ATOM 122 CA LYS 12 5.944 4.292 6.194 1.00 2.83 C ATOM 123 CB LYS 12 6.056 5.305 5.030 1.00 2.83 C ATOM 124 CG LYS 12 5.385 4.953 3.694 1.00 2.83 C ATOM 125 CD LYS 12 5.526 6.100 2.698 1.00 2.83 C ATOM 126 CE LYS 12 4.792 5.830 1.387 1.00 2.83 C ATOM 127 NZ LYS 12 3.304 5.820 1.528 1.00 2.83 N ATOM 131 C LYS 12 4.484 4.099 6.660 1.00 2.83 C ATOM 132 O LYS 12 4.020 4.821 7.546 1.00 2.83 O ATOM 133 N LYS 13 3.786 3.123 6.057 1.00 3.09 N ATOM 135 CA LYS 13 2.389 2.774 6.393 1.00 3.09 C ATOM 136 CB LYS 13 1.774 1.853 5.333 1.00 3.09 C ATOM 137 CG LYS 13 1.303 2.574 4.077 1.00 3.09 C ATOM 138 CD LYS 13 0.682 1.604 3.078 1.00 3.09 C ATOM 139 CE LYS 13 0.179 2.314 1.824 1.00 3.09 C ATOM 140 NZ LYS 13 -1.006 3.191 2.068 1.00 3.09 N ATOM 144 C LYS 13 2.265 2.134 7.787 1.00 3.09 C ATOM 145 O LYS 13 1.289 2.389 8.499 1.00 3.09 O ATOM 146 N LYS 14 3.247 1.291 8.145 1.00 3.98 N ATOM 148 CA LYS 14 3.319 0.607 9.455 1.00 3.98 C ATOM 149 CB LYS 14 4.338 -0.540 9.421 1.00 3.98 C ATOM 150 CG LYS 14 3.850 -1.796 8.710 1.00 3.98 C ATOM 151 CD LYS 14 4.912 -2.883 8.719 1.00 3.98 C ATOM 152 CE LYS 14 4.425 -4.137 8.009 1.00 3.98 C ATOM 153 NZ LYS 14 5.456 -5.211 8.010 1.00 3.98 N ATOM 157 C LYS 14 3.631 1.564 10.622 1.00 3.98 C ATOM 158 O LYS 14 2.984 1.487 11.672 1.00 3.98 O ATOM 159 N PHE 15 4.621 2.450 10.423 1.00 3.74 N ATOM 161 CA PHE 15 5.063 3.455 11.414 1.00 3.74 C ATOM 162 CB PHE 15 6.436 4.050 10.989 1.00 3.74 C ATOM 163 CG PHE 15 7.298 4.581 12.141 1.00 3.74 C ATOM 164 CD1 PHE 15 8.232 3.742 12.795 1.00 3.74 C ATOM 165 CD2 PHE 15 7.206 5.934 12.551 1.00 3.74 C ATOM 166 CE1 PHE 15 9.061 4.237 13.839 1.00 3.74 C ATOM 167 CE2 PHE 15 8.028 6.444 13.593 1.00 3.74 C ATOM 168 CZ PHE 15 8.959 5.593 14.238 1.00 3.74 C ATOM 169 C PHE 15 4.024 4.581 11.641 1.00 3.74 C ATOM 170 O PHE 15 3.730 4.925 12.792 1.00 3.74 O ATOM 171 N LYS 16 3.487 5.128 10.539 1.00 3.19 N ATOM 173 CA LYS 16 2.476 6.209 10.546 1.00 3.19 C ATOM 174 CB LYS 16 3.107 7.592 10.218 1.00 3.19 C ATOM 175 CG LYS 16 4.094 7.662 9.035 1.00 3.19 C ATOM 176 CD LYS 16 4.625 9.078 8.839 1.00 3.19 C ATOM 177 CE LYS 16 5.604 9.171 7.671 1.00 3.19 C ATOM 178 NZ LYS 16 4.963 8.973 6.335 1.00 3.19 N ATOM 182 C LYS 16 1.302 5.887 9.601 1.00 3.19 C ATOM 183 O LYS 16 1.436 5.021 8.728 1.00 3.19 O ATOM 184 N ASN 17 0.167 6.589 9.783 1.00 0.81 N ATOM 186 CA ASN 17 -1.100 6.455 9.005 1.00 0.81 C ATOM 187 CB ASN 17 -0.914 6.815 7.510 1.00 0.81 C ATOM 188 CG ASN 17 -0.523 8.273 7.297 1.00 0.81 C ATOM 189 OD1 ASN 17 -1.382 9.141 7.133 1.00 0.81 O ATOM 190 ND2 ASN 17 0.780 8.543 7.282 1.00 0.81 N ATOM 193 C ASN 17 -1.819 5.096 9.145 1.00 0.81 C ATOM 194 O ASN 17 -1.177 4.083 9.451 1.00 0.81 O ATOM 195 N CYS 18 -3.141 5.093 8.915 1.00 1.34 N ATOM 197 CA CYS 18 -3.999 3.896 9.009 1.00 1.34 C ATOM 198 CB CYS 18 -5.396 4.286 9.503 1.00 1.34 C ATOM 199 SG CYS 18 -6.229 5.549 8.506 1.00 1.34 S ATOM 200 C CYS 18 -4.109 3.097 7.698 1.00 1.34 C ATOM 201 O CYS 18 -4.071 3.681 6.608 1.00 1.34 O ATOM 202 N GLU 19 -4.237 1.768 7.829 1.00 1.53 N ATOM 204 CA GLU 19 -4.353 0.823 6.700 1.00 1.53 C ATOM 205 CB GLU 19 -3.359 -0.338 6.853 1.00 1.53 C ATOM 206 CG GLU 19 -1.891 0.052 6.694 1.00 1.53 C ATOM 207 CD GLU 19 -0.950 -1.128 6.853 1.00 1.53 C ATOM 208 OE1 GLU 19 -0.516 -1.395 7.994 1.00 1.53 O ATOM 209 OE2 GLU 19 -0.642 -1.787 5.838 1.00 1.53 O ATOM 210 C GLU 19 -5.781 0.269 6.565 1.00 1.53 C ATOM 211 O GLU 19 -6.456 0.039 7.577 1.00 1.53 O ATOM 212 N VAL 20 -6.227 0.078 5.313 1.00 1.76 N ATOM 214 CA VAL 20 -7.567 -0.445 4.976 1.00 1.76 C ATOM 215 CB VAL 20 -8.354 0.558 4.006 1.00 1.76 C ATOM 216 CG1 VAL 20 -7.665 0.704 2.632 1.00 1.76 C ATOM 217 CG2 VAL 20 -9.838 0.174 3.871 1.00 1.76 C ATOM 218 C VAL 20 -7.462 -1.887 4.411 1.00 1.76 C ATOM 219 O VAL 20 -6.512 -2.199 3.680 1.00 1.76 O ATOM 220 N ARG 21 -8.435 -2.735 4.772 1.00 1.66 N ATOM 222 CA ARG 21 -8.508 -4.147 4.344 1.00 1.66 C ATOM 223 CB ARG 21 -8.665 -5.079 5.556 1.00 1.66 C ATOM 224 CG ARG 21 -7.444 -5.157 6.466 1.00 1.66 C ATOM 225 CD ARG 21 -7.689 -6.090 7.641 1.00 1.66 C ATOM 226 NE ARG 21 -6.528 -6.173 8.531 1.00 1.66 N ATOM 228 CZ ARG 21 -6.469 -6.896 9.650 1.00 1.66 C ATOM 229 NH1 ARG 21 -7.505 -7.624 10.056 1.00 1.66 N ATOM 232 NH2 ARG 21 -5.358 -6.889 10.374 1.00 1.66 N ATOM 235 C ARG 21 -9.658 -4.387 3.353 1.00 1.66 C ATOM 236 O ARG 21 -10.728 -3.777 3.482 1.00 1.66 O ATOM 237 N CYS 22 -9.410 -5.259 2.364 1.00 1.77 N ATOM 239 CA CYS 22 -10.381 -5.627 1.315 1.00 1.77 C ATOM 240 CB CYS 22 -9.747 -5.456 -0.075 1.00 1.77 C ATOM 241 SG CYS 22 -10.884 -5.660 -1.472 1.00 1.77 S ATOM 242 C CYS 22 -10.862 -7.077 1.501 1.00 1.77 C ATOM 243 O CYS 22 -10.149 -7.894 2.097 1.00 1.77 O ATOM 244 N ASP 23 -12.063 -7.377 0.982 1.00 2.36 N ATOM 246 CA ASP 23 -12.695 -8.709 1.059 1.00 2.36 C ATOM 247 CB ASP 23 -14.202 -8.571 1.336 1.00 2.36 C ATOM 248 CG ASP 23 -14.504 -7.975 2.709 1.00 2.36 C ATOM 249 OD1 ASP 23 -14.618 -6.734 2.813 1.00 2.36 O ATOM 250 OD2 ASP 23 -14.644 -8.749 3.681 1.00 2.36 O ATOM 251 C ASP 23 -12.473 -9.533 -0.222 1.00 2.36 C ATOM 252 O ASP 23 -12.452 -10.769 -0.170 1.00 2.36 O ATOM 253 N GLU 24 -12.290 -8.831 -1.350 1.00 1.93 N ATOM 255 CA GLU 24 -12.060 -9.436 -2.678 1.00 1.93 C ATOM 256 CB GLU 24 -12.904 -8.727 -3.748 1.00 1.93 C ATOM 257 CG GLU 24 -14.409 -8.959 -3.633 1.00 1.93 C ATOM 258 CD GLU 24 -15.197 -8.239 -4.711 1.00 1.93 C ATOM 259 OE1 GLU 24 -15.422 -8.836 -5.786 1.00 1.93 O ATOM 260 OE2 GLU 24 -15.594 -7.076 -4.484 1.00 1.93 O ATOM 261 C GLU 24 -10.572 -9.381 -3.067 1.00 1.93 C ATOM 262 O GLU 24 -9.842 -8.507 -2.582 1.00 1.93 O ATOM 263 N SER 25 -10.144 -10.310 -3.934 1.00 1.67 N ATOM 265 CA SER 25 -8.753 -10.411 -4.414 1.00 1.67 C ATOM 266 CB SER 25 -8.332 -11.882 -4.523 1.00 1.67 C ATOM 267 OG SER 25 -8.415 -12.531 -3.266 1.00 1.67 O ATOM 269 C SER 25 -8.521 -9.686 -5.755 1.00 1.67 C ATOM 270 O SER 25 -9.232 -9.938 -6.738 1.00 1.67 O ATOM 271 N ASN 26 -7.551 -8.759 -5.754 1.00 1.61 N ATOM 273 CA ASN 26 -7.166 -7.951 -6.928 1.00 1.61 C ATOM 274 CB ASN 26 -7.475 -6.458 -6.682 1.00 1.61 C ATOM 275 CG ASN 26 -8.968 -6.176 -6.553 1.00 1.61 C ATOM 276 OD1 ASN 26 -9.647 -5.888 -7.541 1.00 1.61 O ATOM 277 ND2 ASN 26 -9.481 -6.240 -5.326 1.00 1.61 N ATOM 280 C ASN 26 -5.669 -8.135 -7.235 1.00 1.61 C ATOM 281 O ASN 26 -5.177 -7.646 -8.263 1.00 1.61 O ATOM 282 N HIS 27 -4.974 -8.879 -6.353 1.00 1.28 N ATOM 284 CA HIS 27 -3.519 -9.210 -6.393 1.00 1.28 C ATOM 285 CG HIS 27 -1.987 -10.920 -7.551 1.00 1.28 C ATOM 286 CD2 HIS 27 -0.717 -10.911 -8.027 1.00 1.28 C ATOM 287 ND1 HIS 27 -2.120 -12.098 -6.846 1.00 1.28 N ATOM 289 CE1 HIS 27 -0.984 -12.771 -6.893 1.00 1.28 C ATOM 290 NE2 HIS 27 -0.118 -12.073 -7.604 1.00 1.28 N ATOM 292 C HIS 27 -2.595 -8.004 -6.119 1.00 1.28 C ATOM 293 O HIS 27 -1.650 -8.119 -5.330 1.00 1.28 O ATOM 294 CB HIS 27 -3.109 -9.931 -7.707 1.00 1.28 C ATOM 295 N CYS 28 -2.882 -6.868 -6.773 1.00 1.93 N ATOM 297 CA CYS 28 -2.113 -5.622 -6.625 1.00 1.93 C ATOM 298 CB CYS 28 -1.868 -4.963 -7.990 1.00 1.93 C ATOM 299 SG CYS 28 -3.364 -4.638 -8.957 1.00 1.93 S ATOM 300 C CYS 28 -2.796 -4.629 -5.675 1.00 1.93 C ATOM 301 O CYS 28 -4.030 -4.522 -5.659 1.00 1.93 O ATOM 302 N VAL 29 -1.974 -3.928 -4.884 1.00 2.40 N ATOM 304 CA VAL 29 -2.403 -2.920 -3.896 1.00 2.40 C ATOM 305 CB VAL 29 -1.854 -3.205 -2.443 1.00 2.40 C ATOM 306 CG1 VAL 29 -2.899 -3.960 -1.640 1.00 2.40 C ATOM 307 CG2 VAL 29 -0.547 -4.017 -2.471 1.00 2.40 C ATOM 308 C VAL 29 -2.021 -1.503 -4.360 1.00 2.40 C ATOM 309 O VAL 29 -0.989 -1.327 -5.021 1.00 2.40 O ATOM 310 N GLU 30 -2.868 -0.517 -4.030 1.00 2.18 N ATOM 312 CA GLU 30 -2.665 0.891 -4.414 1.00 2.18 C ATOM 313 CB GLU 30 -3.938 1.493 -5.022 1.00 2.18 C ATOM 314 CG GLU 30 -4.325 0.925 -6.385 1.00 2.18 C ATOM 315 CD GLU 30 -5.590 1.552 -6.944 1.00 2.18 C ATOM 316 OE1 GLU 30 -6.688 1.022 -6.672 1.00 2.18 O ATOM 317 OE2 GLU 30 -5.486 2.573 -7.656 1.00 2.18 O ATOM 318 C GLU 30 -2.203 1.745 -3.228 1.00 2.18 C ATOM 319 O GLU 30 -2.627 1.528 -2.085 1.00 2.18 O ATOM 320 N VAL 31 -1.324 2.705 -3.539 1.00 3.50 N ATOM 322 CA VAL 31 -0.696 3.634 -2.588 1.00 3.50 C ATOM 323 CB VAL 31 0.882 3.629 -2.761 1.00 3.50 C ATOM 324 CG1 VAL 31 1.319 4.365 -4.040 1.00 3.50 C ATOM 325 CG2 VAL 31 1.583 4.177 -1.508 1.00 3.50 C ATOM 326 C VAL 31 -1.265 5.063 -2.729 1.00 3.50 C ATOM 327 O VAL 31 -1.681 5.460 -3.823 1.00 3.50 O ATOM 328 N ARG 32 -1.317 5.787 -1.603 1.00 2.21 N ATOM 330 CA ARG 32 -1.796 7.175 -1.553 1.00 2.21 C ATOM 331 CB ARG 32 -2.791 7.351 -0.403 1.00 2.21 C ATOM 332 CG ARG 32 -4.135 6.644 -0.601 1.00 2.21 C ATOM 333 CD ARG 32 -5.082 6.862 0.578 1.00 2.21 C ATOM 334 NE ARG 32 -5.569 8.241 0.671 1.00 2.21 N ATOM 336 CZ ARG 32 -6.403 8.701 1.606 1.00 2.21 C ATOM 337 NH1 ARG 32 -6.872 7.905 2.562 1.00 2.21 N ATOM 340 NH2 ARG 32 -6.772 9.974 1.584 1.00 2.21 N ATOM 343 C ARG 32 -0.557 8.068 -1.344 1.00 2.21 C ATOM 344 O ARG 32 0.225 7.847 -0.407 1.00 2.21 O ATOM 345 N CYS 33 -0.368 9.033 -2.258 1.00 4.12 N ATOM 347 CA CYS 33 0.773 9.968 -2.254 1.00 4.12 C ATOM 348 CB CYS 33 1.806 9.549 -3.323 1.00 4.12 C ATOM 349 SG CYS 33 2.451 7.877 -3.115 1.00 4.12 S ATOM 350 C CYS 33 0.383 11.461 -2.387 1.00 4.12 C ATOM 351 O CYS 33 0.011 12.082 -1.384 1.00 4.12 O ATOM 352 N SER 34 0.468 12.022 -3.608 1.00 3.18 N ATOM 354 CA SER 34 0.154 13.436 -3.899 1.00 3.18 C ATOM 355 CB SER 34 1.448 14.206 -4.235 1.00 3.18 C ATOM 356 OG SER 34 2.140 13.609 -5.319 1.00 3.18 O ATOM 358 C SER 34 -0.928 13.671 -4.983 1.00 3.18 C ATOM 359 O SER 34 -2.111 13.796 -4.641 1.00 3.18 O ATOM 360 N ASP 35 -0.523 13.726 -6.264 1.00 5.50 N ATOM 362 CA ASP 35 -1.420 13.958 -7.419 1.00 5.50 C ATOM 363 CB ASP 35 -1.010 15.235 -8.177 1.00 5.50 C ATOM 364 CG ASP 35 -1.191 16.503 -7.347 1.00 5.50 C ATOM 365 OD1 ASP 35 -2.284 17.110 -7.409 1.00 5.50 O ATOM 366 OD2 ASP 35 -0.236 16.904 -6.646 1.00 5.50 O ATOM 367 C ASP 35 -1.431 12.765 -8.389 1.00 5.50 C ATOM 368 O ASP 35 -0.444 12.026 -8.463 1.00 5.50 O ATOM 369 N THR 36 -2.526 12.624 -9.167 1.00 6.49 N ATOM 371 CA THR 36 -2.796 11.545 -10.171 1.00 6.49 C ATOM 372 CB THR 36 -2.139 11.842 -11.612 1.00 6.49 C ATOM 373 OG1 THR 36 -2.585 10.865 -12.560 1.00 6.49 O ATOM 375 CG2 THR 36 -0.597 11.853 -11.581 1.00 6.49 C ATOM 376 C THR 36 -2.584 10.088 -9.651 1.00 6.49 C ATOM 377 O THR 36 -2.441 9.904 -8.437 1.00 6.49 O ATOM 378 N LYS 37 -2.598 9.078 -10.538 1.00 5.24 N ATOM 380 CA LYS 37 -2.410 7.667 -10.137 1.00 5.24 C ATOM 381 CB LYS 37 -3.119 6.716 -11.111 1.00 5.24 C ATOM 382 CG LYS 37 -4.642 6.778 -11.068 1.00 5.24 C ATOM 383 CD LYS 37 -5.265 5.803 -12.062 1.00 5.24 C ATOM 384 CE LYS 37 -6.791 5.849 -12.038 1.00 5.24 C ATOM 385 NZ LYS 37 -7.384 5.312 -10.776 1.00 5.24 N ATOM 389 C LYS 37 -0.927 7.272 -9.989 1.00 5.24 C ATOM 390 O LYS 37 -0.123 7.453 -10.914 1.00 5.24 O ATOM 391 N TYR 38 -0.597 6.771 -8.793 1.00 3.59 N ATOM 393 CA TYR 38 0.751 6.330 -8.388 1.00 3.59 C ATOM 394 CB TYR 38 1.353 7.333 -7.365 1.00 3.59 C ATOM 395 CG TYR 38 0.338 8.174 -6.575 1.00 3.59 C ATOM 396 CD1 TYR 38 -0.650 7.568 -5.758 1.00 3.59 C ATOM 397 CE1 TYR 38 -1.613 8.343 -5.067 1.00 3.59 C ATOM 398 CD2 TYR 38 0.339 9.578 -6.671 1.00 3.59 C ATOM 399 CE2 TYR 38 -0.619 10.361 -5.977 1.00 3.59 C ATOM 400 CZ TYR 38 -1.589 9.737 -5.182 1.00 3.59 C ATOM 401 OH TYR 38 -2.520 10.500 -4.515 1.00 3.59 O ATOM 403 C TYR 38 0.686 4.943 -7.739 1.00 3.59 C ATOM 404 O TYR 38 -0.272 4.654 -7.010 1.00 3.59 O ATOM 405 N THR 39 1.673 4.085 -8.027 1.00 2.69 N ATOM 407 CA THR 39 1.756 2.740 -7.427 1.00 2.69 C ATOM 408 CB THR 39 1.331 1.578 -8.424 1.00 2.69 C ATOM 409 OG1 THR 39 1.555 0.299 -7.815 1.00 2.69 O ATOM 411 CG2 THR 39 2.076 1.658 -9.774 1.00 2.69 C ATOM 412 C THR 39 3.144 2.497 -6.803 1.00 2.69 C ATOM 413 O THR 39 4.176 2.677 -7.466 1.00 2.69 O ATOM 414 N LEU 40 3.138 2.146 -5.512 1.00 1.49 N ATOM 416 CA LEU 40 4.338 1.836 -4.716 1.00 1.49 C ATOM 417 CB LEU 40 4.609 2.927 -3.657 1.00 1.49 C ATOM 418 CG LEU 40 5.141 4.328 -4.031 1.00 1.49 C ATOM 419 CD1 LEU 40 4.700 5.317 -2.970 1.00 1.49 C ATOM 420 CD2 LEU 40 6.673 4.382 -4.186 1.00 1.49 C ATOM 421 C LEU 40 4.076 0.499 -4.024 1.00 1.49 C ATOM 422 O LEU 40 5.009 -0.268 -3.762 1.00 1.49 O ATOM 423 N CYS 41 2.786 0.230 -3.777 1.00 1.44 N ATOM 425 CA CYS 41 2.284 -0.985 -3.118 1.00 1.44 C ATOM 426 CB CYS 41 0.997 -0.654 -2.354 1.00 1.44 C ATOM 427 SG CYS 41 1.211 0.511 -0.992 1.00 1.44 S ATOM 428 C CYS 41 2.034 -2.129 -4.106 1.00 1.44 C ATOM 429 O CYS 41 1.640 -1.841 -5.257 1.00 1.44 O ATOM 430 OXT CYS 41 2.263 -3.296 -3.723 1.00 1.44 O TER 431 CYS 41 END