####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS441_5 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS441_5.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 37 1 - 37 4.49 10.16 LCS_AVERAGE: 85.25 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 30 5 - 34 1.95 10.69 LCS_AVERAGE: 58.48 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 5 - 23 1.00 10.73 LONGEST_CONTINUOUS_SEGMENT: 19 6 - 24 0.79 10.68 LCS_AVERAGE: 28.79 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 4 37 3 3 3 4 4 5 6 11 15 20 28 34 34 34 35 35 35 35 36 36 LCS_GDT Q 2 Q 2 3 4 37 3 3 3 4 4 16 22 25 28 31 33 34 34 34 35 35 35 35 36 36 LCS_GDT E 3 E 3 3 4 37 3 3 4 4 4 5 13 18 28 31 33 34 34 34 35 35 35 35 36 36 LCS_GDT T 4 T 4 3 21 37 3 3 4 4 6 12 16 25 28 31 33 34 34 34 35 35 35 35 36 36 LCS_GDT R 5 R 5 19 30 37 3 4 9 23 26 27 28 30 31 31 33 34 34 34 35 35 35 35 36 36 LCS_GDT K 6 K 6 19 30 37 10 21 25 25 26 27 28 30 31 31 33 34 34 34 35 35 35 35 36 36 LCS_GDT K 7 K 7 19 30 37 10 21 25 25 26 27 28 30 31 31 33 34 34 34 35 35 35 35 36 36 LCS_GDT C 8 C 8 19 30 37 9 21 25 25 26 27 28 30 31 31 33 34 34 34 35 35 35 35 36 36 LCS_GDT T 9 T 9 19 30 37 10 21 25 25 26 27 28 30 31 31 33 34 34 34 35 35 35 35 36 36 LCS_GDT E 10 E 10 19 30 37 10 21 25 25 26 27 28 30 31 31 33 34 34 34 35 35 35 35 36 36 LCS_GDT M 11 M 11 19 30 37 11 21 25 25 26 27 28 30 31 31 33 34 34 34 35 35 35 35 36 36 LCS_GDT K 12 K 12 19 30 37 11 21 25 25 26 27 28 30 31 31 33 34 34 34 35 35 35 35 36 36 LCS_GDT K 13 K 13 19 30 37 6 21 25 25 26 27 28 30 31 31 33 34 34 34 35 35 35 35 36 36 LCS_GDT K 14 K 14 19 30 37 11 21 25 25 26 27 28 30 31 31 33 34 34 34 35 35 35 35 36 36 LCS_GDT F 15 F 15 19 30 37 11 21 25 25 26 27 28 30 31 31 33 34 34 34 35 35 35 35 36 36 LCS_GDT K 16 K 16 19 30 37 3 21 25 25 26 27 28 30 31 31 33 34 34 34 35 35 35 35 36 36 LCS_GDT N 17 N 17 19 30 37 11 21 25 25 26 27 28 30 31 31 33 34 34 34 35 35 35 35 36 36 LCS_GDT C 18 C 18 19 30 37 11 21 25 25 26 27 28 30 31 31 33 34 34 34 35 35 35 35 36 36 LCS_GDT E 19 E 19 19 30 37 10 21 25 25 26 27 28 30 31 31 33 34 34 34 35 35 35 35 36 36 LCS_GDT V 20 V 20 19 30 37 8 21 25 25 26 27 28 30 31 31 33 34 34 34 35 35 35 35 36 36 LCS_GDT R 21 R 21 19 30 37 8 21 25 25 26 27 28 30 31 31 33 34 34 34 35 35 35 35 36 36 LCS_GDT C 22 C 22 19 30 37 11 21 25 25 26 27 28 30 31 31 33 34 34 34 35 35 35 35 36 36 LCS_GDT D 23 D 23 19 30 37 3 21 25 25 26 27 28 30 31 31 33 34 34 34 35 35 35 35 36 36 LCS_GDT E 24 E 24 19 30 37 3 4 25 25 26 27 28 30 31 31 33 34 34 34 35 35 35 35 36 36 LCS_GDT S 25 S 25 4 30 37 3 4 5 8 10 15 19 25 31 31 33 34 34 34 35 35 35 35 36 36 LCS_GDT N 26 N 26 4 30 37 3 4 4 7 10 25 28 30 31 31 33 34 34 34 35 35 35 35 36 36 LCS_GDT H 27 H 27 4 30 37 3 4 5 8 21 27 28 30 31 31 33 34 34 34 35 35 35 35 36 36 LCS_GDT C 28 C 28 7 30 37 3 4 20 24 26 27 28 30 31 31 33 34 34 34 35 35 35 35 36 36 LCS_GDT V 29 V 29 7 30 37 11 21 25 25 26 27 28 30 31 31 33 34 34 34 35 35 35 35 36 36 LCS_GDT E 30 E 30 7 30 37 11 21 25 25 26 27 28 30 31 31 33 34 34 34 35 35 35 35 36 36 LCS_GDT V 31 V 31 7 30 37 11 21 25 25 26 27 28 30 31 31 33 34 34 34 35 35 35 35 36 36 LCS_GDT R 32 R 32 7 30 37 5 21 25 25 26 27 28 30 31 31 33 34 34 34 35 35 35 35 36 36 LCS_GDT C 33 C 33 7 30 37 11 21 25 25 26 27 28 30 31 31 33 34 34 34 35 35 35 35 36 36 LCS_GDT S 34 S 34 7 30 37 5 17 25 25 26 27 28 30 31 31 33 34 34 34 35 35 35 35 36 36 LCS_GDT D 35 D 35 3 8 37 3 3 6 11 21 24 28 30 31 31 31 31 32 34 35 35 35 35 36 36 LCS_GDT T 36 T 36 3 7 37 3 3 4 5 7 7 10 15 21 25 26 30 32 32 32 33 35 35 36 36 LCS_GDT K 37 K 37 5 7 37 3 4 5 5 7 7 8 8 8 8 9 11 12 21 27 33 33 33 35 36 LCS_GDT Y 38 Y 38 5 7 34 3 4 5 5 7 7 8 8 8 8 9 11 11 11 12 13 14 16 22 24 LCS_GDT T 39 T 39 5 7 10 3 4 5 5 7 7 8 8 8 8 9 11 11 11 12 12 13 13 16 17 LCS_GDT L 40 L 40 5 7 10 3 4 5 5 7 7 8 8 8 8 9 11 11 11 11 12 12 13 14 14 LCS_GDT C 41 C 41 5 7 10 3 4 5 5 7 7 8 8 8 8 9 11 11 11 11 12 12 13 14 15 LCS_AVERAGE LCS_A: 57.51 ( 28.79 58.48 85.25 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 11 21 25 25 26 27 28 30 31 31 33 34 34 34 35 35 35 35 36 36 GDT PERCENT_AT 26.83 51.22 60.98 60.98 63.41 65.85 68.29 73.17 75.61 75.61 80.49 82.93 82.93 82.93 85.37 85.37 85.37 85.37 87.80 87.80 GDT RMS_LOCAL 0.36 0.65 0.79 0.79 0.97 1.11 1.40 1.99 2.24 2.24 2.74 3.03 3.03 3.02 3.31 3.31 3.31 3.31 3.89 3.89 GDT RMS_ALL_AT 10.66 10.71 10.61 10.61 10.64 10.65 10.68 10.47 10.48 10.48 10.95 11.04 11.04 10.67 10.75 10.75 10.75 10.75 10.43 10.43 # Checking swapping # possible swapping detected: E 3 E 3 # possible swapping detected: E 10 E 10 # possible swapping detected: F 15 F 15 # possible swapping detected: E 19 E 19 # possible swapping detected: E 24 E 24 # possible swapping detected: D 35 D 35 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 11.290 0 0.267 0.611 12.039 0.000 0.000 12.039 LGA Q 2 Q 2 8.783 0 0.252 0.380 9.751 0.000 0.000 7.474 LGA E 3 E 3 8.614 0 0.643 1.400 11.604 0.000 0.000 11.120 LGA T 4 T 4 7.163 0 0.033 1.127 9.923 0.000 0.000 9.923 LGA R 5 R 5 2.511 0 0.555 1.150 6.385 33.636 34.380 3.994 LGA K 6 K 6 1.012 0 0.088 0.701 2.437 65.455 58.182 2.066 LGA K 7 K 7 1.173 0 0.025 0.768 3.300 65.455 47.677 2.964 LGA C 8 C 8 1.259 0 0.034 0.053 1.450 69.545 68.182 1.274 LGA T 9 T 9 0.644 0 0.045 0.118 1.046 90.909 84.675 1.046 LGA E 10 E 10 0.555 0 0.034 1.077 4.925 81.818 62.828 4.925 LGA M 11 M 11 0.907 0 0.083 0.826 4.287 81.818 64.318 4.287 LGA K 12 K 12 0.953 0 0.049 0.890 4.733 73.636 52.323 4.733 LGA K 13 K 13 0.982 0 0.038 1.093 3.498 73.636 54.343 3.498 LGA K 14 K 14 1.354 0 0.086 0.587 4.027 65.455 48.283 4.027 LGA F 15 F 15 0.991 0 0.190 0.272 1.987 77.727 68.926 1.758 LGA K 16 K 16 1.428 0 0.097 1.357 6.225 65.455 42.020 6.225 LGA N 17 N 17 1.211 0 0.060 1.130 3.427 73.636 56.591 3.427 LGA C 18 C 18 0.881 0 0.041 0.110 1.697 82.273 74.242 1.697 LGA E 19 E 19 0.533 0 0.183 0.783 3.569 81.818 58.990 2.548 LGA V 20 V 20 1.151 0 0.057 0.085 1.958 69.545 63.636 1.958 LGA R 21 R 21 1.449 0 0.075 1.383 5.879 61.818 39.008 3.429 LGA C 22 C 22 1.202 0 0.152 0.185 2.084 69.545 63.636 2.084 LGA D 23 D 23 2.111 0 0.288 1.234 5.071 36.364 27.273 2.742 LGA E 24 E 24 2.195 0 0.637 1.003 5.198 23.636 37.778 1.081 LGA S 25 S 25 6.307 0 0.572 0.974 8.351 2.727 1.818 8.081 LGA N 26 N 26 4.866 0 0.607 1.012 6.292 0.909 15.455 2.306 LGA H 27 H 27 4.144 0 0.384 1.180 6.868 10.000 6.364 6.368 LGA C 28 C 28 2.127 0 0.258 0.925 3.125 38.636 35.152 3.125 LGA V 29 V 29 0.754 0 0.200 0.997 3.094 77.727 65.714 1.411 LGA E 30 E 30 0.878 0 0.157 0.361 1.614 77.727 76.566 0.579 LGA V 31 V 31 0.902 0 0.026 1.076 3.218 73.636 63.636 3.218 LGA R 32 R 32 1.491 0 0.254 1.095 4.526 61.818 48.760 4.526 LGA C 33 C 33 1.100 0 0.547 0.602 4.152 46.818 58.788 1.309 LGA S 34 S 34 0.564 0 0.513 0.756 4.618 51.818 37.879 4.618 LGA D 35 D 35 5.675 0 0.645 1.335 8.144 4.545 2.500 6.330 LGA T 36 T 36 11.724 0 0.208 1.087 15.763 0.000 0.000 14.789 LGA K 37 K 37 14.459 0 0.205 1.106 18.348 0.000 0.000 14.944 LGA Y 38 Y 38 21.895 0 0.093 1.179 28.191 0.000 0.000 28.191 LGA T 39 T 39 26.524 0 0.071 1.088 30.865 0.000 0.000 25.318 LGA L 40 L 40 33.587 0 0.581 1.263 37.665 0.000 0.000 34.906 LGA C 41 C 41 36.739 0 0.341 0.577 38.562 0.000 0.000 35.550 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 9.379 9.511 9.707 43.647 37.071 21.419 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 30 1.99 67.683 66.855 1.436 LGA_LOCAL RMSD: 1.989 Number of atoms: 30 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 10.472 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 9.379 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.680579 * X + 0.186782 * Y + -0.708467 * Z + -4.078197 Y_new = -0.357037 * X + -0.928927 * Y + 0.098078 * Z + 5.167283 Z_new = -0.639795 * X + 0.319698 * Y + 0.698896 * Z + 1.369385 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.658454 0.694231 0.429018 [DEG: -152.3182 39.7765 24.5809 ] ZXZ: -1.708359 0.796944 -1.107397 [DEG: -97.8818 45.6615 -63.4492 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS441_5 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS441_5.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 30 1.99 66.855 9.38 REMARK ---------------------------------------------------------- MOLECULE T0955TS441_5 PFRMAT TS TARGET T0955 MODEL 5 PARENT N/A ATOM 1 N SER 1 1.272 -12.315 9.390 1.00 3.85 N ATOM 2 CA SER 1 0.124 -12.044 10.285 1.00 3.85 C ATOM 3 CB SER 1 -0.383 -10.609 10.091 1.00 3.85 C ATOM 4 OG SER 1 -0.887 -10.444 8.774 1.00 3.85 O ATOM 5 C SER 1 -0.993 -12.983 9.976 1.00 3.85 C ATOM 6 O SER 1 -0.773 -14.090 9.487 1.00 3.85 O ATOM 7 N GLN 2 -2.234 -12.562 10.275 1.00 79.51 N ATOM 8 CA GLN 2 -3.357 -13.402 10.001 1.00 79.51 C ATOM 9 CB GLN 2 -4.688 -12.814 10.500 1.00 79.51 C ATOM 10 CG GLN 2 -5.894 -13.723 10.251 1.00 79.51 C ATOM 11 CD GLN 2 -7.129 -13.020 10.797 1.00 79.51 C ATOM 12 OE1 GLN 2 -7.124 -12.513 11.919 1.00 79.51 O ATOM 13 NE2 GLN 2 -8.218 -12.979 9.984 1.00 79.51 N ATOM 14 C GLN 2 -3.427 -13.546 8.519 1.00 79.51 C ATOM 15 O GLN 2 -3.705 -14.628 8.001 1.00 79.51 O ATOM 16 N GLU 3 -3.157 -12.448 7.790 1.00200.60 N ATOM 17 CA GLU 3 -3.212 -12.509 6.362 1.00200.60 C ATOM 18 CB GLU 3 -4.105 -11.437 5.724 1.00200.60 C ATOM 19 CG GLU 3 -5.592 -11.704 5.963 1.00200.60 C ATOM 20 CD GLU 3 -6.380 -10.587 5.302 1.00200.60 C ATOM 21 OE1 GLU 3 -5.750 -9.574 4.900 1.00200.60 O ATOM 22 OE2 GLU 3 -7.626 -10.729 5.199 1.00200.60 O ATOM 23 C GLU 3 -1.832 -12.359 5.819 1.00200.60 C ATOM 24 O GLU 3 -0.948 -11.769 6.438 1.00200.60 O ATOM 25 N THR 4 -1.635 -12.944 4.625 1.00 68.46 N ATOM 26 CA THR 4 -0.388 -13.000 3.928 1.00 68.46 C ATOM 27 CB THR 4 -0.489 -13.845 2.691 1.00 68.46 C ATOM 28 OG1 THR 4 -0.898 -15.161 3.036 1.00 68.46 O ATOM 29 CG2 THR 4 0.882 -13.881 1.993 1.00 68.46 C ATOM 30 C THR 4 0.064 -11.633 3.513 1.00 68.46 C ATOM 31 O THR 4 1.246 -11.322 3.637 1.00 68.46 O ATOM 32 N ARG 5 -0.863 -10.773 3.036 1.00223.54 N ATOM 33 CA ARG 5 -0.471 -9.500 2.493 1.00223.54 C ATOM 34 CB ARG 5 -1.631 -8.770 1.786 1.00223.54 C ATOM 35 CG ARG 5 -2.891 -8.620 2.645 1.00223.54 C ATOM 36 CD ARG 5 -4.041 -7.896 1.932 1.00223.54 C ATOM 37 NE ARG 5 -5.302 -8.221 2.657 1.00223.54 N ATOM 38 CZ ARG 5 -6.386 -7.393 2.581 1.00223.54 C ATOM 39 NH1 ARG 5 -6.305 -6.216 1.900 1.00223.54 N ATOM 40 NH2 ARG 5 -7.552 -7.746 3.197 1.00223.54 N ATOM 41 C ARG 5 0.108 -8.600 3.541 1.00223.54 C ATOM 42 O ARG 5 -0.596 -7.829 4.191 1.00223.54 O ATOM 43 N LYS 6 1.439 -8.720 3.713 1.00131.91 N ATOM 44 CA LYS 6 2.301 -7.966 4.578 1.00131.91 C ATOM 45 CB LYS 6 3.669 -8.645 4.756 1.00131.91 C ATOM 46 CG LYS 6 4.423 -8.852 3.441 1.00131.91 C ATOM 47 CD LYS 6 5.839 -9.402 3.622 1.00131.91 C ATOM 48 CE LYS 6 6.827 -8.400 4.222 1.00131.91 C ATOM 49 NZ LYS 6 8.155 -9.035 4.367 1.00131.91 N ATOM 50 C LYS 6 2.528 -6.602 4.003 1.00131.91 C ATOM 51 O LYS 6 2.735 -5.635 4.732 1.00131.91 O ATOM 52 N LYS 7 2.476 -6.503 2.662 1.00131.78 N ATOM 53 CA LYS 7 2.844 -5.319 1.935 1.00131.78 C ATOM 54 CB LYS 7 2.722 -5.479 0.411 1.00131.78 C ATOM 55 CG LYS 7 3.898 -6.252 -0.191 1.00131.78 C ATOM 56 CD LYS 7 5.245 -5.555 0.028 1.00131.78 C ATOM 57 CE LYS 7 6.456 -6.403 -0.362 1.00131.78 C ATOM 58 NZ LYS 7 6.489 -6.601 -1.829 1.00131.78 N ATOM 59 C LYS 7 2.040 -4.131 2.354 1.00131.78 C ATOM 60 O LYS 7 2.554 -3.014 2.322 1.00131.78 O ATOM 61 N CYS 8 0.770 -4.317 2.752 1.00 36.24 N ATOM 62 CA CYS 8 -0.013 -3.174 3.119 1.00 36.24 C ATOM 63 CB CYS 8 -1.428 -3.564 3.588 1.00 36.24 C ATOM 64 SG CYS 8 -2.499 -2.123 3.843 1.00 36.24 S ATOM 65 C CYS 8 0.688 -2.486 4.254 1.00 36.24 C ATOM 66 O CYS 8 0.818 -1.262 4.274 1.00 36.24 O ATOM 67 N THR 9 1.186 -3.273 5.225 1.00 38.63 N ATOM 68 CA THR 9 1.853 -2.718 6.365 1.00 38.63 C ATOM 69 CB THR 9 2.270 -3.764 7.355 1.00 38.63 C ATOM 70 OG1 THR 9 1.139 -4.499 7.799 1.00 38.63 O ATOM 71 CG2 THR 9 2.948 -3.067 8.550 1.00 38.63 C ATOM 72 C THR 9 3.101 -2.025 5.922 1.00 38.63 C ATOM 73 O THR 9 3.437 -0.963 6.441 1.00 38.63 O ATOM 74 N GLU 10 3.844 -2.628 4.976 1.00126.20 N ATOM 75 CA GLU 10 5.085 -2.047 4.542 1.00126.20 C ATOM 76 CB GLU 10 5.898 -2.978 3.630 1.00126.20 C ATOM 77 CG GLU 10 7.307 -2.453 3.347 1.00126.20 C ATOM 78 CD GLU 10 8.149 -2.676 4.597 1.00126.20 C ATOM 79 OE1 GLU 10 8.031 -1.857 5.546 1.00126.20 O ATOM 80 OE2 GLU 10 8.914 -3.675 4.620 1.00126.20 O ATOM 81 C GLU 10 4.856 -0.778 3.776 1.00126.20 C ATOM 82 O GLU 10 5.515 0.231 4.023 1.00126.20 O ATOM 83 N MET 11 3.893 -0.791 2.836 1.00114.44 N ATOM 84 CA MET 11 3.677 0.329 1.957 1.00114.44 C ATOM 85 CB MET 11 2.558 0.079 0.929 1.00114.44 C ATOM 86 CG MET 11 2.897 -0.906 -0.192 1.00114.44 C ATOM 87 SD MET 11 4.001 -0.249 -1.476 1.00114.44 S ATOM 88 CE MET 11 3.374 -1.367 -2.761 1.00114.44 C ATOM 89 C MET 11 3.273 1.548 2.724 1.00114.44 C ATOM 90 O MET 11 3.766 2.644 2.465 1.00114.44 O ATOM 91 N LYS 12 2.366 1.394 3.702 1.00 62.61 N ATOM 92 CA LYS 12 1.895 2.552 4.404 1.00 62.61 C ATOM 93 CB LYS 12 0.801 2.229 5.433 1.00 62.61 C ATOM 94 CG LYS 12 0.004 3.457 5.878 1.00 62.61 C ATOM 95 CD LYS 12 -1.249 3.110 6.685 1.00 62.61 C ATOM 96 CE LYS 12 -2.129 4.320 7.001 1.00 62.61 C ATOM 97 NZ LYS 12 -3.053 4.574 5.871 1.00 62.61 N ATOM 98 C LYS 12 3.061 3.158 5.123 1.00 62.61 C ATOM 99 O LYS 12 3.153 4.376 5.259 1.00 62.61 O ATOM 100 N LYS 13 3.964 2.305 5.638 1.00 68.54 N ATOM 101 CA LYS 13 5.131 2.753 6.346 1.00 68.54 C ATOM 102 CB LYS 13 5.927 1.585 6.954 1.00 68.54 C ATOM 103 CG LYS 13 7.171 2.020 7.732 1.00 68.54 C ATOM 104 CD LYS 13 7.820 0.887 8.530 1.00 68.54 C ATOM 105 CE LYS 13 8.538 -0.138 7.646 1.00 68.54 C ATOM 106 NZ LYS 13 9.154 -1.190 8.482 1.00 68.54 N ATOM 107 C LYS 13 6.052 3.469 5.405 1.00 68.54 C ATOM 108 O LYS 13 6.624 4.502 5.750 1.00 68.54 O ATOM 109 N LYS 14 6.237 2.913 4.191 1.00 45.85 N ATOM 110 CA LYS 14 7.115 3.500 3.222 1.00 45.85 C ATOM 111 CB LYS 14 7.214 2.657 1.939 1.00 45.85 C ATOM 112 CG LYS 14 7.910 1.308 2.127 1.00 45.85 C ATOM 113 CD LYS 14 7.677 0.345 0.962 1.00 45.85 C ATOM 114 CE LYS 14 8.562 -0.901 1.001 1.00 45.85 C ATOM 115 NZ LYS 14 8.129 -1.864 -0.034 1.00 45.85 N ATOM 116 C LYS 14 6.571 4.837 2.837 1.00 45.85 C ATOM 117 O LYS 14 7.309 5.820 2.784 1.00 45.85 O ATOM 118 N PHE 15 5.253 4.897 2.552 1.00 71.75 N ATOM 119 CA PHE 15 4.620 6.134 2.194 1.00 71.75 C ATOM 120 CB PHE 15 3.702 5.999 0.971 1.00 71.75 C ATOM 121 CG PHE 15 4.531 5.521 -0.168 1.00 71.75 C ATOM 122 CD1 PHE 15 5.223 6.412 -0.954 1.00 71.75 C ATOM 123 CD2 PHE 15 4.616 4.177 -0.446 1.00 71.75 C ATOM 124 CE1 PHE 15 5.986 5.965 -2.004 1.00 71.75 C ATOM 125 CE2 PHE 15 5.378 3.723 -1.495 1.00 71.75 C ATOM 126 CZ PHE 15 6.066 4.620 -2.277 1.00 71.75 C ATOM 127 C PHE 15 3.714 6.491 3.331 1.00 71.75 C ATOM 128 O PHE 15 2.524 6.178 3.310 1.00 71.75 O ATOM 129 N LYS 16 4.258 7.180 4.348 1.00 71.20 N ATOM 130 CA LYS 16 3.502 7.538 5.513 1.00 71.20 C ATOM 131 CB LYS 16 4.367 8.173 6.610 1.00 71.20 C ATOM 132 CG LYS 16 5.351 7.202 7.259 1.00 71.20 C ATOM 133 CD LYS 16 6.409 7.895 8.118 1.00 71.20 C ATOM 134 CE LYS 16 7.379 6.925 8.791 1.00 71.20 C ATOM 135 NZ LYS 16 8.278 6.325 7.780 1.00 71.20 N ATOM 136 C LYS 16 2.466 8.553 5.154 1.00 71.20 C ATOM 137 O LYS 16 1.366 8.555 5.705 1.00 71.20 O ATOM 138 N ASN 17 2.836 9.490 4.264 1.00 63.81 N ATOM 139 CA ASN 17 1.976 10.559 3.847 1.00 63.81 C ATOM 140 CB ASN 17 2.743 11.643 3.073 1.00 63.81 C ATOM 141 CG ASN 17 3.731 12.265 4.049 1.00 63.81 C ATOM 142 OD1 ASN 17 4.878 11.832 4.147 1.00 63.81 O ATOM 143 ND2 ASN 17 3.276 13.304 4.799 1.00 63.81 N ATOM 144 C ASN 17 0.889 10.041 2.959 1.00 63.81 C ATOM 145 O ASN 17 -0.243 10.520 3.014 1.00 63.81 O ATOM 146 N CYS 18 1.219 9.036 2.122 1.00 67.77 N ATOM 147 CA CYS 18 0.337 8.537 1.104 1.00 67.77 C ATOM 148 CB CYS 18 1.012 7.598 0.083 1.00 67.77 C ATOM 149 SG CYS 18 2.250 8.391 -0.980 1.00 67.77 S ATOM 150 C CYS 18 -0.785 7.728 1.662 1.00 67.77 C ATOM 151 O CYS 18 -0.788 7.307 2.817 1.00 67.77 O ATOM 152 N GLU 19 -1.800 7.520 0.803 1.00 51.04 N ATOM 153 CA GLU 19 -2.914 6.694 1.139 1.00 51.04 C ATOM 154 CB GLU 19 -4.256 7.305 0.706 1.00 51.04 C ATOM 155 CG GLU 19 -4.618 8.576 1.474 1.00 51.04 C ATOM 156 CD GLU 19 -5.802 9.229 0.776 1.00 51.04 C ATOM 157 OE1 GLU 19 -5.561 10.027 -0.169 1.00 51.04 O ATOM 158 OE2 GLU 19 -6.962 8.938 1.173 1.00 51.04 O ATOM 159 C GLU 19 -2.724 5.433 0.363 1.00 51.04 C ATOM 160 O GLU 19 -2.746 5.436 -0.867 1.00 51.04 O ATOM 161 N VAL 20 -2.514 4.313 1.076 1.00 52.07 N ATOM 162 CA VAL 20 -2.329 3.073 0.392 1.00 52.07 C ATOM 163 CB VAL 20 -1.273 2.214 1.023 1.00 52.07 C ATOM 164 CG1 VAL 20 -1.156 0.912 0.221 1.00 52.07 C ATOM 165 CG2 VAL 20 0.037 3.017 1.095 1.00 52.07 C ATOM 166 C VAL 20 -3.623 2.356 0.521 1.00 52.07 C ATOM 167 O VAL 20 -4.014 1.955 1.615 1.00 52.07 O ATOM 168 N ARG 21 -4.339 2.176 -0.599 1.00 93.14 N ATOM 169 CA ARG 21 -5.582 1.495 -0.448 1.00 93.14 C ATOM 170 CB ARG 21 -6.687 1.971 -1.406 1.00 93.14 C ATOM 171 CG ARG 21 -7.111 3.417 -1.144 1.00 93.14 C ATOM 172 CD ARG 21 -8.491 3.753 -1.708 1.00 93.14 C ATOM 173 NE ARG 21 -8.509 3.293 -3.121 1.00 93.14 N ATOM 174 CZ ARG 21 -9.335 3.892 -4.024 1.00 93.14 C ATOM 175 NH1 ARG 21 -10.113 4.944 -3.637 1.00 93.14 N ATOM 176 NH2 ARG 21 -9.378 3.447 -5.312 1.00 93.14 N ATOM 177 C ARG 21 -5.286 0.068 -0.706 1.00 93.14 C ATOM 178 O ARG 21 -4.930 -0.330 -1.815 1.00 93.14 O ATOM 179 N CYS 22 -5.415 -0.744 0.353 1.00 56.17 N ATOM 180 CA CYS 22 -5.093 -2.125 0.238 1.00 56.17 C ATOM 181 CB CYS 22 -4.401 -2.648 1.510 1.00 56.17 C ATOM 182 SG CYS 22 -2.997 -1.573 1.950 1.00 56.17 S ATOM 183 C CYS 22 -6.382 -2.840 0.031 1.00 56.17 C ATOM 184 O CYS 22 -7.225 -2.910 0.924 1.00 56.17 O ATOM 185 N ASP 23 -6.565 -3.367 -1.193 1.00 70.85 N ATOM 186 CA ASP 23 -7.775 -4.044 -1.540 1.00 70.85 C ATOM 187 CB ASP 23 -8.311 -3.607 -2.912 1.00 70.85 C ATOM 188 CG ASP 23 -9.696 -4.196 -3.107 1.00 70.85 C ATOM 189 OD1 ASP 23 -10.255 -4.738 -2.116 1.00 70.85 O ATOM 190 OD2 ASP 23 -10.210 -4.121 -4.252 1.00 70.85 O ATOM 191 C ASP 23 -7.430 -5.486 -1.640 1.00 70.85 C ATOM 192 O ASP 23 -6.819 -5.918 -2.616 1.00 70.85 O ATOM 193 N GLU 24 -7.794 -6.287 -0.623 1.00220.96 N ATOM 194 CA GLU 24 -7.442 -7.670 -0.681 1.00220.96 C ATOM 195 CB GLU 24 -8.004 -8.393 -1.915 1.00220.96 C ATOM 196 CG GLU 24 -9.536 -8.467 -1.918 1.00220.96 C ATOM 197 CD GLU 24 -9.970 -9.327 -0.739 1.00220.96 C ATOM 198 OE1 GLU 24 -9.566 -10.520 -0.693 1.00220.96 O ATOM 199 OE2 GLU 24 -10.711 -8.804 0.135 1.00220.96 O ATOM 200 C GLU 24 -5.953 -7.731 -0.690 1.00220.96 C ATOM 201 O GLU 24 -5.274 -6.722 -0.500 1.00220.96 O ATOM 202 N SER 25 -5.365 -8.922 -0.854 1.00115.09 N ATOM 203 CA SER 25 -3.945 -8.834 -0.859 1.00115.09 C ATOM 204 CB SER 25 -3.231 -10.166 -0.553 1.00115.09 C ATOM 205 OG SER 25 -3.569 -11.153 -1.516 1.00115.09 O ATOM 206 C SER 25 -3.555 -8.364 -2.216 1.00115.09 C ATOM 207 O SER 25 -3.303 -9.153 -3.124 1.00115.09 O ATOM 208 N ASN 26 -3.497 -7.034 -2.398 1.00 76.81 N ATOM 209 CA ASN 26 -3.081 -6.561 -3.676 1.00 76.81 C ATOM 210 CB ASN 26 -3.972 -5.466 -4.278 1.00 76.81 C ATOM 211 CG ASN 26 -5.217 -6.151 -4.826 1.00 76.81 C ATOM 212 OD1 ASN 26 -5.500 -7.306 -4.511 1.00 76.81 O ATOM 213 ND2 ASN 26 -5.990 -5.418 -5.675 1.00 76.81 N ATOM 214 C ASN 26 -1.711 -6.024 -3.493 1.00 76.81 C ATOM 215 O ASN 26 -1.521 -4.961 -2.899 1.00 76.81 O ATOM 216 N HIS 27 -0.727 -6.778 -4.021 1.00 58.19 N ATOM 217 CA HIS 27 0.646 -6.400 -3.928 1.00 58.19 C ATOM 218 ND1 HIS 27 0.457 -9.682 -4.490 1.00 58.19 N ATOM 219 CG HIS 27 1.439 -8.794 -4.109 1.00 58.19 C ATOM 220 CB HIS 27 1.566 -7.398 -4.650 1.00 58.19 C ATOM 221 NE2 HIS 27 1.711 -10.732 -2.985 1.00 58.19 N ATOM 222 CD2 HIS 27 2.196 -9.451 -3.189 1.00 58.19 C ATOM 223 CE1 HIS 27 0.666 -10.824 -3.788 1.00 58.19 C ATOM 224 C HIS 27 0.712 -5.106 -4.647 1.00 58.19 C ATOM 225 O HIS 27 1.330 -4.147 -4.183 1.00 58.19 O ATOM 226 N CYS 28 0.042 -5.054 -5.811 1.00 77.36 N ATOM 227 CA CYS 28 -0.034 -3.820 -6.518 1.00 77.36 C ATOM 228 CB CYS 28 -0.444 -3.996 -7.992 1.00 77.36 C ATOM 229 SG CYS 28 -0.551 -2.420 -8.890 1.00 77.36 S ATOM 230 C CYS 28 -1.111 -3.061 -5.823 1.00 77.36 C ATOM 231 O CYS 28 -2.182 -2.812 -6.378 1.00 77.36 O ATOM 232 N VAL 29 -0.824 -2.680 -4.567 1.00114.73 N ATOM 233 CA VAL 29 -1.718 -1.929 -3.752 1.00114.73 C ATOM 234 CB VAL 29 -1.218 -1.767 -2.349 1.00114.73 C ATOM 235 CG1 VAL 29 0.067 -0.923 -2.380 1.00114.73 C ATOM 236 CG2 VAL 29 -2.343 -1.166 -1.495 1.00114.73 C ATOM 237 C VAL 29 -1.773 -0.584 -4.377 1.00114.73 C ATOM 238 O VAL 29 -0.828 -0.164 -5.043 1.00114.73 O ATOM 239 N GLU 30 -2.907 0.116 -4.216 1.00102.68 N ATOM 240 CA GLU 30 -3.002 1.405 -4.822 1.00102.68 C ATOM 241 CB GLU 30 -4.452 1.823 -5.129 1.00102.68 C ATOM 242 CG GLU 30 -4.564 3.203 -5.781 1.00102.68 C ATOM 243 CD GLU 30 -6.037 3.590 -5.852 1.00102.68 C ATOM 244 OE1 GLU 30 -6.800 2.912 -6.590 1.00102.68 O ATOM 245 OE2 GLU 30 -6.415 4.575 -5.162 1.00102.68 O ATOM 246 C GLU 30 -2.463 2.389 -3.848 1.00102.68 C ATOM 247 O GLU 30 -3.109 2.698 -2.850 1.00102.68 O ATOM 248 N VAL 31 -1.256 2.917 -4.112 1.00 96.18 N ATOM 249 CA VAL 31 -0.726 3.892 -3.215 1.00 96.18 C ATOM 250 CB VAL 31 0.696 3.636 -2.800 1.00 96.18 C ATOM 251 CG1 VAL 31 1.623 3.768 -4.020 1.00 96.18 C ATOM 252 CG2 VAL 31 1.043 4.599 -1.650 1.00 96.18 C ATOM 253 C VAL 31 -0.767 5.188 -3.946 1.00 96.18 C ATOM 254 O VAL 31 -0.395 5.272 -5.115 1.00 96.18 O ATOM 255 N ARG 32 -1.273 6.241 -3.288 1.00113.55 N ATOM 256 CA ARG 32 -1.306 7.493 -3.975 1.00113.55 C ATOM 257 CB ARG 32 -2.688 7.849 -4.552 1.00113.55 C ATOM 258 CG ARG 32 -3.769 7.977 -3.477 1.00113.55 C ATOM 259 CD ARG 32 -5.134 8.428 -4.005 1.00113.55 C ATOM 260 NE ARG 32 -6.044 8.498 -2.829 1.00113.55 N ATOM 261 CZ ARG 32 -7.122 9.335 -2.830 1.00113.55 C ATOM 262 NH1 ARG 32 -7.393 10.106 -3.924 1.00113.55 N ATOM 263 NH2 ARG 32 -7.923 9.408 -1.728 1.00113.55 N ATOM 264 C ARG 32 -0.987 8.570 -2.993 1.00113.55 C ATOM 265 O ARG 32 -1.391 8.514 -1.830 1.00113.55 O ATOM 266 N CYS 33 -0.200 9.568 -3.437 1.00 87.24 N ATOM 267 CA CYS 33 -0.001 10.731 -2.628 1.00 87.24 C ATOM 268 CB CYS 33 1.463 11.050 -2.254 1.00 87.24 C ATOM 269 SG CYS 33 1.972 10.364 -0.647 1.00 87.24 S ATOM 270 C CYS 33 -0.527 11.870 -3.431 1.00 87.24 C ATOM 271 O CYS 33 -0.010 12.179 -4.501 1.00 87.24 O ATOM 272 N SER 34 -1.596 12.519 -2.935 1.00183.99 N ATOM 273 CA SER 34 -2.157 13.597 -3.689 1.00183.99 C ATOM 274 CB SER 34 -3.427 13.212 -4.468 1.00183.99 C ATOM 275 OG SER 34 -3.922 14.335 -5.182 1.00183.99 O ATOM 276 C SER 34 -2.536 14.679 -2.741 1.00183.99 C ATOM 277 O SER 34 -2.684 14.453 -1.541 1.00183.99 O ATOM 278 N ASP 35 -2.680 15.907 -3.273 1.00165.31 N ATOM 279 CA ASP 35 -3.066 17.018 -2.458 1.00165.31 C ATOM 280 CB ASP 35 -2.682 18.386 -3.054 1.00165.31 C ATOM 281 CG ASP 35 -1.162 18.508 -3.046 1.00165.31 C ATOM 282 OD1 ASP 35 -0.495 17.606 -2.474 1.00165.31 O ATOM 283 OD2 ASP 35 -0.647 19.508 -3.619 1.00165.31 O ATOM 284 C ASP 35 -4.554 16.976 -2.347 1.00165.31 C ATOM 285 O ASP 35 -5.213 16.138 -2.961 1.00165.31 O ATOM 286 N THR 36 -5.119 17.880 -1.526 1.00240.41 N ATOM 287 CA THR 36 -6.538 17.919 -1.358 1.00240.41 C ATOM 288 CB THR 36 -6.974 18.611 -0.098 1.00240.41 C ATOM 289 OG1 THR 36 -8.377 18.472 0.077 1.00240.41 O ATOM 290 CG2 THR 36 -6.590 20.096 -0.184 1.00240.41 C ATOM 291 C THR 36 -7.100 18.677 -2.512 1.00240.41 C ATOM 292 O THR 36 -6.368 19.319 -3.262 1.00240.41 O ATOM 293 N LYS 37 -8.429 18.597 -2.695 1.00199.04 N ATOM 294 CA LYS 37 -9.044 19.285 -3.788 1.00199.04 C ATOM 295 CB LYS 37 -10.220 18.530 -4.429 1.00199.04 C ATOM 296 CG LYS 37 -9.821 17.208 -5.090 1.00199.04 C ATOM 297 CD LYS 37 -11.014 16.396 -5.599 1.00199.04 C ATOM 298 CE LYS 37 -12.053 16.069 -4.526 1.00199.04 C ATOM 299 NZ LYS 37 -13.224 15.414 -5.153 1.00199.04 N ATOM 300 C LYS 37 -9.584 20.574 -3.267 1.00199.04 C ATOM 301 O LYS 37 -9.635 20.805 -2.061 1.00199.04 O ATOM 302 N TYR 38 -9.978 21.461 -4.200 1.00277.89 N ATOM 303 CA TYR 38 -10.529 22.736 -3.852 1.00277.89 C ATOM 304 CB TYR 38 -10.507 23.708 -5.048 1.00277.89 C ATOM 305 CG TYR 38 -11.081 25.031 -4.674 1.00277.89 C ATOM 306 CD1 TYR 38 -10.301 25.974 -4.041 1.00277.89 C ATOM 307 CD2 TYR 38 -12.388 25.341 -4.971 1.00277.89 C ATOM 308 CE1 TYR 38 -10.823 27.201 -3.699 1.00277.89 C ATOM 309 CE2 TYR 38 -12.914 26.566 -4.632 1.00277.89 C ATOM 310 CZ TYR 38 -12.130 27.502 -3.998 1.00277.89 C ATOM 311 OH TYR 38 -12.665 28.760 -3.650 1.00277.89 O ATOM 312 C TYR 38 -11.952 22.485 -3.480 1.00277.89 C ATOM 313 O TYR 38 -12.688 21.840 -4.222 1.00277.89 O ATOM 314 N THR 39 -12.371 22.964 -2.291 1.00225.15 N ATOM 315 CA THR 39 -13.733 22.751 -1.896 1.00225.15 C ATOM 316 CB THR 39 -13.869 21.962 -0.628 1.00225.15 C ATOM 317 OG1 THR 39 -13.279 22.661 0.458 1.00225.15 O ATOM 318 CG2 THR 39 -13.177 20.603 -0.825 1.00225.15 C ATOM 319 C THR 39 -14.362 24.084 -1.666 1.00225.15 C ATOM 320 O THR 39 -13.950 24.837 -0.784 1.00225.15 O ATOM 321 N LEU 40 -15.383 24.413 -2.480 1.00127.90 N ATOM 322 CA LEU 40 -16.063 25.664 -2.329 1.00127.90 C ATOM 323 CB LEU 40 -17.120 25.906 -3.417 1.00127.90 C ATOM 324 CG LEU 40 -17.879 27.234 -3.236 1.00127.90 C ATOM 325 CD1 LEU 40 -16.946 28.447 -3.384 1.00127.90 C ATOM 326 CD2 LEU 40 -19.106 27.300 -4.156 1.00127.90 C ATOM 327 C LEU 40 -16.782 25.670 -1.022 1.00127.90 C ATOM 328 O LEU 40 -16.683 26.625 -0.254 1.00127.90 O ATOM 329 N CYS 41 -17.512 24.580 -0.723 1.00 8.05 N ATOM 330 CA CYS 41 -18.271 24.538 0.491 1.00 8.05 C ATOM 331 CB CYS 41 -19.266 23.367 0.556 1.00 8.05 C ATOM 332 SG CYS 41 -20.592 23.512 -0.679 1.00 8.05 S ATOM 333 C CYS 41 -17.298 24.378 1.645 1.00 8.05 C ATOM 334 O CYS 41 -16.156 24.894 1.538 1.00 8.05 O ATOM 335 OXT CYS 41 -17.695 23.737 2.656 1.00 8.05 O TER END