####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 334), selected 41 , name T0955TS426_5 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS426_5.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 1.20 1.20 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 1.20 1.20 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 39 3 - 41 0.99 1.22 LCS_AVERAGE: 92.62 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 41 41 3 3 10 19 24 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Q 2 Q 2 33 41 41 9 26 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 3 E 3 39 41 41 14 30 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 4 T 4 39 41 41 19 30 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 5 R 5 39 41 41 21 30 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 6 K 6 39 41 41 21 30 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 7 K 7 39 41 41 21 30 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 8 C 8 39 41 41 21 30 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 9 T 9 39 41 41 21 30 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 10 E 10 39 41 41 21 30 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT M 11 M 11 39 41 41 21 30 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 12 K 12 39 41 41 21 30 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 13 K 13 39 41 41 21 30 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 14 K 14 39 41 41 21 30 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT F 15 F 15 39 41 41 12 30 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 16 K 16 39 41 41 4 5 5 32 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 17 N 17 39 41 41 3 30 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 18 C 18 39 41 41 18 30 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 19 E 19 39 41 41 18 30 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 20 V 20 39 41 41 9 30 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 21 R 21 39 41 41 9 28 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 22 C 22 39 41 41 5 25 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 23 D 23 39 41 41 9 14 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 24 E 24 39 41 41 21 30 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 25 S 25 39 41 41 21 30 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 26 N 26 39 41 41 21 30 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT H 27 H 27 39 41 41 21 30 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 28 C 28 39 41 41 21 30 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 29 V 29 39 41 41 21 30 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 30 E 30 39 41 41 21 30 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 31 V 31 39 41 41 21 30 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 32 R 32 39 41 41 21 30 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 33 C 33 39 41 41 5 30 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 34 S 34 39 41 41 9 14 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 35 D 35 39 41 41 4 18 35 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 36 T 36 39 41 41 15 30 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 37 K 37 39 41 41 21 30 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Y 38 Y 38 39 41 41 9 25 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 39 T 39 39 41 41 5 30 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT L 40 L 40 39 41 41 21 30 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 41 C 41 39 41 41 15 30 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_AVERAGE LCS_A: 97.54 ( 92.62 100.00 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 21 30 36 39 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 GDT PERCENT_AT 51.22 73.17 87.80 95.12 95.12 97.56 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.33 0.52 0.71 0.87 0.87 1.01 1.20 1.20 1.20 1.20 1.20 1.20 1.20 1.20 1.20 1.20 1.20 1.20 1.20 1.20 GDT RMS_ALL_AT 1.22 1.22 1.22 1.23 1.23 1.21 1.20 1.20 1.20 1.20 1.20 1.20 1.20 1.20 1.20 1.20 1.20 1.20 1.20 1.20 # Checking swapping # possible swapping detected: E 3 E 3 # possible swapping detected: E 19 E 19 # possible swapping detected: E 24 E 24 # possible swapping detected: D 35 D 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 4.055 0 0.654 0.790 7.453 6.818 4.545 7.453 LGA Q 2 Q 2 1.508 0 0.193 0.940 2.117 62.273 66.465 0.686 LGA E 3 E 3 0.886 0 0.083 1.498 5.994 77.727 46.061 4.126 LGA T 4 T 4 0.586 0 0.019 1.150 2.824 90.909 74.805 2.824 LGA R 5 R 5 0.407 0 0.043 0.997 3.355 100.000 72.893 3.355 LGA K 6 K 6 0.292 0 0.052 0.885 1.825 100.000 83.232 1.825 LGA K 7 K 7 0.339 0 0.091 0.641 2.328 100.000 73.939 2.328 LGA C 8 C 8 0.357 0 0.065 0.198 1.158 100.000 91.212 1.158 LGA T 9 T 9 0.445 0 0.018 0.040 0.484 100.000 100.000 0.440 LGA E 10 E 10 0.443 0 0.031 0.704 1.994 100.000 79.394 1.058 LGA M 11 M 11 0.208 0 0.079 0.729 2.486 100.000 87.955 2.486 LGA K 12 K 12 0.242 0 0.024 0.988 4.019 100.000 82.626 4.019 LGA K 13 K 13 0.363 0 0.052 0.532 2.086 95.455 83.232 0.789 LGA K 14 K 14 0.568 0 0.108 0.588 3.012 86.364 75.354 3.012 LGA F 15 F 15 1.210 0 0.393 0.301 2.073 55.000 66.612 1.596 LGA K 16 K 16 3.197 0 0.650 1.470 5.011 15.909 20.808 4.767 LGA N 17 N 17 0.751 0 0.347 0.825 3.297 77.727 62.045 1.461 LGA C 18 C 18 0.706 0 0.085 0.159 0.964 81.818 81.818 0.964 LGA E 19 E 19 0.691 0 0.261 0.378 1.305 77.727 78.182 0.648 LGA V 20 V 20 1.083 0 0.089 0.087 1.480 65.455 67.792 0.934 LGA R 21 R 21 1.212 0 0.048 0.997 3.157 77.727 54.545 3.157 LGA C 22 C 22 1.555 0 0.095 0.153 1.658 58.182 55.758 1.537 LGA D 23 D 23 1.947 0 0.371 1.015 3.932 37.727 33.409 2.955 LGA E 24 E 24 0.446 0 0.028 0.576 3.812 95.455 58.990 3.812 LGA S 25 S 25 0.314 0 0.094 0.426 1.525 100.000 91.818 1.525 LGA N 26 N 26 0.641 0 0.182 1.176 5.213 90.909 60.227 5.213 LGA H 27 H 27 0.569 0 0.070 0.251 0.806 81.818 85.455 0.234 LGA C 28 C 28 0.465 0 0.141 0.646 2.298 83.182 78.485 2.298 LGA V 29 V 29 0.387 0 0.095 0.119 0.809 95.455 89.610 0.709 LGA E 30 E 30 0.233 0 0.149 0.552 2.621 95.455 82.020 2.621 LGA V 31 V 31 0.232 0 0.017 0.036 0.384 100.000 100.000 0.098 LGA R 32 R 32 0.468 0 0.098 0.892 3.332 86.818 56.198 3.330 LGA C 33 C 33 0.846 0 0.539 0.588 3.189 61.818 63.030 1.286 LGA S 34 S 34 1.738 0 0.214 0.669 2.647 45.000 47.273 2.050 LGA D 35 D 35 2.307 0 0.153 1.058 5.937 36.364 25.000 3.861 LGA T 36 T 36 1.153 0 0.079 0.917 3.565 78.182 62.857 1.850 LGA K 37 K 37 0.089 0 0.051 1.421 3.633 78.636 60.202 3.633 LGA Y 38 Y 38 1.202 0 0.016 0.863 4.446 82.273 50.303 4.446 LGA T 39 T 39 1.048 0 0.110 0.122 1.995 61.818 57.143 1.727 LGA L 40 L 40 0.335 0 0.029 0.359 1.174 100.000 86.818 1.174 LGA C 41 C 41 0.802 1 0.386 0.482 3.821 70.000 47.013 3.821 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 334 99.70 41 41 SUMMARY(RMSD_GDC): 1.197 1.339 1.862 78.293 66.954 43.725 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 41 1.20 92.073 96.160 3.160 LGA_LOCAL RMSD: 1.197 Number of atoms: 41 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 1.197 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 1.197 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.831024 * X + -0.238304 * Y + -0.502603 * Z + -4.053401 Y_new = 0.458961 * X + 0.804251 * Y + 0.377538 * Z + -76.069206 Z_new = 0.314250 * X + -0.544418 * Y + 0.777724 * Z + -26.006952 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.504595 -0.319667 -0.610736 [DEG: 28.9112 -18.3156 -34.9926 ] ZXZ: -2.215042 0.679759 2.618090 [DEG: -126.9126 38.9473 150.0055 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS426_5 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS426_5.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 41 1.20 96.160 1.20 REMARK ---------------------------------------------------------- MOLECULE T0955TS426_5 PFRMAT TS TARGET T0955 MODEL 5 PARENT N/A ATOM 1 N SER 1 -3.200 -13.948 0.351 1.00 2.32 ATOM 2 CA SER 1 -3.104 -12.489 0.227 1.00 2.32 ATOM 4 CB SER 1 -4.488 -11.844 0.342 1.00 2.32 ATOM 7 OG SER 1 -5.009 -11.892 1.657 1.00 2.32 ATOM 9 C SER 1 -2.150 -11.835 1.229 1.00 2.32 ATOM 10 O SER 1 -1.841 -10.643 1.134 1.00 2.32 ATOM 11 N GLN 2 -1.627 -12.623 2.171 1.00 1.58 ATOM 13 CA GLN 2 -0.697 -12.162 3.203 1.00 1.58 ATOM 15 CB GLN 2 -0.289 -13.348 4.095 1.00 1.58 ATOM 18 CG GLN 2 -1.367 -13.732 5.125 1.00 1.58 ATOM 21 CD GLN 2 -1.668 -12.612 6.125 1.00 1.58 ATOM 22 OE1 GLN 2 -2.803 -12.222 6.350 1.00 1.58 ATOM 23 NE2 GLN 2 -0.669 -12.002 6.723 1.00 1.58 ATOM 26 C GLN 2 0.546 -11.429 2.667 1.00 1.58 ATOM 27 O GLN 2 1.054 -10.537 3.342 1.00 1.58 ATOM 28 N GLU 3 1.032 -11.756 1.466 1.00 1.48 ATOM 30 CA GLU 3 2.158 -11.037 0.854 1.00 1.48 ATOM 32 CB GLU 3 2.792 -11.915 -0.240 1.00 1.48 ATOM 35 CG GLU 3 4.296 -11.647 -0.433 1.00 1.48 ATOM 38 CD GLU 3 4.592 -10.371 -1.222 1.00 1.48 ATOM 39 OE1 GLU 3 3.981 -10.193 -2.295 1.00 1.48 ATOM 40 OE2 GLU 3 5.462 -9.571 -0.795 1.00 1.48 ATOM 41 C GLU 3 1.776 -9.630 0.378 1.00 1.48 ATOM 42 O GLU 3 2.494 -8.671 0.662 1.00 1.48 ATOM 43 N THR 4 0.589 -9.481 -0.216 1.00 1.48 ATOM 45 CA THR 4 -0.031 -8.190 -0.557 1.00 1.48 ATOM 47 CB THR 4 -1.366 -8.427 -1.291 1.00 1.48 ATOM 49 CG2 THR 4 -1.943 -7.155 -1.904 1.00 1.48 ATOM 53 OG1 THR 4 -1.128 -9.334 -2.344 1.00 1.48 ATOM 55 C THR 4 -0.248 -7.329 0.685 1.00 1.48 ATOM 56 O THR 4 0.107 -6.153 0.681 1.00 1.48 ATOM 57 N ARG 5 -0.755 -7.908 1.783 1.00 1.29 ATOM 59 CA ARG 5 -0.910 -7.210 3.081 1.00 1.29 ATOM 61 CB ARG 5 -1.580 -8.150 4.100 1.00 1.29 ATOM 64 CG ARG 5 -3.032 -8.490 3.749 1.00 1.29 ATOM 67 CD ARG 5 -3.604 -9.558 4.691 1.00 1.29 ATOM 70 NE ARG 5 -4.991 -9.860 4.327 1.00 1.29 ATOM 72 CZ ARG 5 -5.793 -10.788 4.797 1.00 1.29 ATOM 73 NH1 ARG 5 -6.970 -10.922 4.264 1.00 1.29 ATOM 76 NH2 ARG 5 -5.463 -11.588 5.774 1.00 1.29 ATOM 79 C ARG 5 0.426 -6.736 3.665 1.00 1.29 ATOM 80 O ARG 5 0.541 -5.603 4.136 1.00 1.29 ATOM 81 N LYS 6 1.451 -7.591 3.615 1.00 1.12 ATOM 83 CA LYS 6 2.811 -7.269 4.065 1.00 1.12 ATOM 85 CB LYS 6 3.638 -8.570 4.041 1.00 1.12 ATOM 88 CG LYS 6 5.118 -8.459 4.461 1.00 1.12 ATOM 91 CD LYS 6 6.092 -7.927 3.398 1.00 1.12 ATOM 94 CE LYS 6 5.968 -8.690 2.072 1.00 1.12 ATOM 97 NZ LYS 6 6.884 -8.177 1.038 1.00 1.12 ATOM 101 C LYS 6 3.401 -6.105 3.276 1.00 1.12 ATOM 102 O LYS 6 3.806 -5.121 3.894 1.00 1.12 ATOM 103 N LYS 7 3.343 -6.151 1.938 1.00 1.22 ATOM 105 CA LYS 7 3.708 -5.039 1.043 1.00 1.22 ATOM 107 CB LYS 7 3.421 -5.412 -0.418 1.00 1.22 ATOM 110 CG LYS 7 4.542 -6.264 -1.020 1.00 1.22 ATOM 113 CD LYS 7 4.110 -6.792 -2.387 1.00 1.22 ATOM 116 CE LYS 7 5.275 -7.489 -3.098 1.00 1.22 ATOM 119 NZ LYS 7 4.760 -8.433 -4.109 1.00 1.22 ATOM 123 C LYS 7 2.974 -3.748 1.408 1.00 1.22 ATOM 124 O LYS 7 3.603 -2.714 1.572 1.00 1.22 ATOM 125 N CYS 8 1.660 -3.807 1.594 1.00 1.25 ATOM 127 CA CYS 8 0.815 -2.678 1.998 1.00 1.25 ATOM 129 CB CYS 8 -0.619 -3.240 2.087 1.00 1.25 ATOM 132 SG CYS 8 -1.982 -2.094 1.801 1.00 1.25 ATOM 133 C CYS 8 1.269 -2.048 3.325 1.00 1.25 ATOM 134 O CYS 8 1.230 -0.827 3.481 1.00 1.25 ATOM 135 N THR 9 1.748 -2.871 4.262 1.00 1.16 ATOM 137 CA THR 9 2.361 -2.427 5.522 1.00 1.16 ATOM 139 CB THR 9 2.543 -3.601 6.500 1.00 1.16 ATOM 141 CG2 THR 9 2.979 -3.141 7.892 1.00 1.16 ATOM 145 OG1 THR 9 1.315 -4.272 6.668 1.00 1.16 ATOM 147 C THR 9 3.708 -1.727 5.312 1.00 1.16 ATOM 148 O THR 9 3.943 -0.660 5.887 1.00 1.16 ATOM 149 N GLU 10 4.575 -2.275 4.448 1.00 1.30 ATOM 151 CA GLU 10 5.815 -1.597 4.049 1.00 1.30 ATOM 153 CB GLU 10 6.566 -2.339 2.928 1.00 1.30 ATOM 156 CG GLU 10 6.985 -3.804 3.107 1.00 1.30 ATOM 159 CD GLU 10 7.501 -4.357 1.761 1.00 1.30 ATOM 160 OE1 GLU 10 7.160 -5.510 1.406 1.00 1.30 ATOM 161 OE2 GLU 10 8.200 -3.590 1.056 1.00 1.30 ATOM 162 C GLU 10 5.513 -0.205 3.503 1.00 1.30 ATOM 163 O GLU 10 6.159 0.753 3.908 1.00 1.30 ATOM 164 N MET 11 4.534 -0.076 2.603 1.00 1.23 ATOM 166 CA MET 11 4.221 1.196 1.956 1.00 1.23 ATOM 168 CB MET 11 3.312 0.969 0.735 1.00 1.23 ATOM 171 CG MET 11 3.812 -0.073 -0.283 1.00 1.23 ATOM 174 SD MET 11 5.607 -0.342 -0.445 1.00 1.23 ATOM 175 CE MET 11 5.599 -1.996 -1.195 1.00 1.23 ATOM 179 C MET 11 3.612 2.190 2.946 1.00 1.23 ATOM 180 O MET 11 3.998 3.357 2.933 1.00 1.23 ATOM 181 N LYS 12 2.764 1.734 3.881 1.00 1.15 ATOM 183 CA LYS 12 2.279 2.558 5.006 1.00 1.15 ATOM 185 CB LYS 12 1.313 1.761 5.897 1.00 1.15 ATOM 188 CG LYS 12 -0.084 1.636 5.277 1.00 1.15 ATOM 191 CD LYS 12 -1.007 0.783 6.156 1.00 1.15 ATOM 194 CE LYS 12 -2.420 0.703 5.563 1.00 1.15 ATOM 197 NZ LYS 12 -2.445 -0.061 4.295 1.00 1.15 ATOM 201 C LYS 12 3.407 3.119 5.883 1.00 1.15 ATOM 202 O LYS 12 3.301 4.239 6.395 1.00 1.15 ATOM 203 N LYS 13 4.487 2.352 6.080 1.00 1.45 ATOM 205 CA LYS 13 5.667 2.825 6.825 1.00 1.45 ATOM 207 CB LYS 13 6.480 1.623 7.346 1.00 1.45 ATOM 210 CG LYS 13 5.725 0.873 8.462 1.00 1.45 ATOM 213 CD LYS 13 6.542 -0.289 9.040 1.00 1.45 ATOM 216 CE LYS 13 5.721 -1.017 10.116 1.00 1.45 ATOM 219 NZ LYS 13 6.504 -2.070 10.809 1.00 1.45 ATOM 223 C LYS 13 6.536 3.797 6.011 1.00 1.45 ATOM 224 O LYS 13 6.787 4.901 6.492 1.00 1.45 ATOM 225 N LYS 14 6.930 3.418 4.790 1.00 1.61 ATOM 227 CA LYS 14 7.807 4.157 3.859 1.00 1.61 ATOM 229 CB LYS 14 8.011 3.337 2.565 1.00 1.61 ATOM 232 CG LYS 14 8.853 2.057 2.686 1.00 1.61 ATOM 235 CD LYS 14 8.633 1.206 1.422 1.00 1.61 ATOM 238 CE LYS 14 9.311 -0.166 1.504 1.00 1.61 ATOM 241 NZ LYS 14 8.800 -1.074 0.447 1.00 1.61 ATOM 245 C LYS 14 7.241 5.512 3.453 1.00 1.61 ATOM 246 O LYS 14 7.890 6.531 3.627 1.00 1.61 ATOM 247 N PHE 15 6.025 5.515 2.915 1.00 1.49 ATOM 249 CA PHE 15 5.369 6.715 2.428 1.00 1.49 ATOM 251 CB PHE 15 4.437 6.354 1.265 1.00 1.49 ATOM 254 CG PHE 15 5.115 5.728 0.061 1.00 1.49 ATOM 255 CD1 PHE 15 4.925 4.367 -0.226 1.00 1.49 ATOM 257 CE1 PHE 15 5.501 3.787 -1.368 1.00 1.49 ATOM 259 CZ PHE 15 6.285 4.576 -2.229 1.00 1.49 ATOM 261 CE2 PHE 15 6.487 5.938 -1.943 1.00 1.49 ATOM 263 CD2 PHE 15 5.902 6.516 -0.802 1.00 1.49 ATOM 265 C PHE 15 4.600 7.382 3.561 1.00 1.49 ATOM 266 O PHE 15 3.893 6.714 4.319 1.00 1.49 ATOM 267 N LYS 16 4.754 8.696 3.743 1.00 1.94 ATOM 269 CA LYS 16 4.253 9.415 4.922 1.00 1.94 ATOM 271 CB LYS 16 5.437 9.964 5.733 1.00 1.94 ATOM 274 CG LYS 16 5.152 10.062 7.242 1.00 1.94 ATOM 277 CD LYS 16 5.460 8.791 8.061 1.00 1.94 ATOM 280 CE LYS 16 4.428 7.646 7.987 1.00 1.94 ATOM 283 NZ LYS 16 4.697 6.669 6.904 1.00 1.94 ATOM 287 C LYS 16 3.256 10.483 4.482 1.00 1.94 ATOM 288 O LYS 16 3.563 11.296 3.622 1.00 1.94 ATOM 289 N ASN 17 2.058 10.412 5.068 1.00 1.70 ATOM 291 CA ASN 17 0.875 11.218 4.749 1.00 1.70 ATOM 293 CB ASN 17 1.176 12.730 4.869 1.00 1.70 ATOM 296 CG ASN 17 1.847 13.126 6.183 1.00 1.70 ATOM 297 OD1 ASN 17 2.005 12.344 7.109 1.00 1.70 ATOM 298 ND2 ASN 17 2.267 14.361 6.310 1.00 1.70 ATOM 301 C ASN 17 0.190 10.764 3.449 1.00 1.70 ATOM 302 O ASN 17 -0.216 11.574 2.618 1.00 1.70 ATOM 303 N CYS 18 0.075 9.439 3.293 1.00 1.28 ATOM 305 CA CYS 18 -0.467 8.789 2.113 1.00 1.28 ATOM 307 CB CYS 18 0.687 8.184 1.302 1.00 1.28 ATOM 310 SG CYS 18 2.121 9.267 1.067 1.00 1.28 ATOM 311 C CYS 18 -1.485 7.714 2.493 1.00 1.28 ATOM 312 O CYS 18 -1.255 6.916 3.404 1.00 1.28 ATOM 313 N GLU 19 -2.604 7.690 1.784 1.00 0.92 ATOM 315 CA GLU 19 -3.521 6.552 1.733 1.00 0.92 ATOM 317 CB GLU 19 -4.634 6.957 0.749 1.00 0.92 ATOM 320 CG GLU 19 -5.742 5.928 0.499 1.00 0.92 ATOM 323 CD GLU 19 -6.652 6.452 -0.620 1.00 0.92 ATOM 324 OE1 GLU 19 -7.321 7.493 -0.423 1.00 0.92 ATOM 325 OE2 GLU 19 -6.593 5.926 -1.754 1.00 0.92 ATOM 326 C GLU 19 -2.784 5.309 1.230 1.00 0.92 ATOM 327 O GLU 19 -1.956 5.418 0.323 1.00 0.92 ATOM 328 N VAL 20 -3.107 4.126 1.764 1.00 0.88 ATOM 330 CA VAL 20 -2.600 2.857 1.223 1.00 0.88 ATOM 332 CB VAL 20 -1.298 2.392 1.902 1.00 0.88 ATOM 334 CG1 VAL 20 -0.694 1.226 1.114 1.00 0.88 ATOM 338 CG2 VAL 20 -0.216 3.468 2.023 1.00 0.88 ATOM 342 C VAL 20 -3.668 1.771 1.257 1.00 0.88 ATOM 343 O VAL 20 -3.903 1.119 2.280 1.00 0.88 ATOM 344 N ARG 21 -4.290 1.557 0.100 1.00 1.03 ATOM 346 CA ARG 21 -5.237 0.477 -0.202 1.00 1.03 ATOM 348 CB ARG 21 -6.037 0.953 -1.434 1.00 1.03 ATOM 351 CG ARG 21 -7.412 0.292 -1.605 1.00 1.03 ATOM 354 CD ARG 21 -8.211 0.954 -2.745 1.00 1.03 ATOM 357 NE ARG 21 -7.697 0.608 -4.084 1.00 1.03 ATOM 359 CZ ARG 21 -7.911 -0.505 -4.754 1.00 1.03 ATOM 360 NH1 ARG 21 -7.360 -0.700 -5.905 1.00 1.03 ATOM 363 NH2 ARG 21 -8.652 -1.477 -4.311 1.00 1.03 ATOM 366 C ARG 21 -4.508 -0.835 -0.472 1.00 1.03 ATOM 367 O ARG 21 -3.458 -0.848 -1.116 1.00 1.03 ATOM 368 N CYS 22 -5.110 -1.933 -0.026 1.00 0.98 ATOM 370 CA CYS 22 -4.662 -3.286 -0.338 1.00 0.98 ATOM 372 CB CYS 22 -4.299 -4.052 0.953 1.00 0.98 ATOM 375 SG CYS 22 -3.659 -3.106 2.382 1.00 0.98 ATOM 376 C CYS 22 -5.768 -3.962 -1.153 1.00 0.98 ATOM 377 O CYS 22 -6.917 -4.013 -0.719 1.00 0.98 ATOM 378 N ASP 23 -5.419 -4.442 -2.344 1.00 1.30 ATOM 380 CA ASP 23 -6.331 -5.023 -3.323 1.00 1.30 ATOM 382 CB ASP 23 -6.291 -4.235 -4.635 1.00 1.30 ATOM 385 CG ASP 23 -7.525 -4.521 -5.507 1.00 1.30 ATOM 386 OD1 ASP 23 -8.104 -3.531 -6.004 1.00 1.30 ATOM 387 OD2 ASP 23 -7.914 -5.700 -5.661 1.00 1.30 ATOM 388 C ASP 23 -5.999 -6.506 -3.502 1.00 1.30 ATOM 389 O ASP 23 -5.223 -6.908 -4.368 1.00 1.30 ATOM 390 N GLU 24 -6.541 -7.290 -2.572 1.00 1.60 ATOM 392 CA GLU 24 -6.292 -8.725 -2.417 1.00 1.60 ATOM 394 CB GLU 24 -6.700 -9.146 -1.000 1.00 1.60 ATOM 397 CG GLU 24 -5.877 -8.361 0.041 1.00 1.60 ATOM 400 CD GLU 24 -6.151 -8.783 1.482 1.00 1.60 ATOM 401 OE1 GLU 24 -6.671 -9.896 1.734 1.00 1.60 ATOM 402 OE2 GLU 24 -5.750 -8.040 2.398 1.00 1.60 ATOM 403 C GLU 24 -6.988 -9.574 -3.487 1.00 1.60 ATOM 404 O GLU 24 -6.557 -10.677 -3.792 1.00 1.60 ATOM 405 N SER 25 -8.013 -9.004 -4.121 1.00 1.98 ATOM 407 CA SER 25 -8.603 -9.476 -5.371 1.00 1.98 ATOM 409 CB SER 25 -9.834 -8.615 -5.717 1.00 1.98 ATOM 412 OG SER 25 -9.852 -7.352 -5.057 1.00 1.98 ATOM 414 C SER 25 -7.638 -9.468 -6.563 1.00 1.98 ATOM 415 O SER 25 -7.801 -10.277 -7.474 1.00 1.98 ATOM 416 N ASN 26 -6.638 -8.580 -6.558 1.00 1.75 ATOM 418 CA ASN 26 -5.721 -8.339 -7.673 1.00 1.75 ATOM 420 CB ASN 26 -6.074 -6.977 -8.307 1.00 1.75 ATOM 423 CG ASN 26 -7.447 -6.922 -8.949 1.00 1.75 ATOM 424 OD1 ASN 26 -7.694 -7.502 -9.990 1.00 1.75 ATOM 425 ND2 ASN 26 -8.375 -6.186 -8.387 1.00 1.75 ATOM 428 C ASN 26 -4.240 -8.364 -7.232 1.00 1.75 ATOM 429 O ASN 26 -3.373 -7.895 -7.963 1.00 1.75 ATOM 430 N HIS 27 -3.952 -8.850 -6.019 1.00 1.25 ATOM 432 CA HIS 27 -2.655 -8.803 -5.322 1.00 1.25 ATOM 434 CB HIS 27 -1.932 -10.150 -5.470 1.00 1.25 ATOM 437 CG HIS 27 -2.742 -11.250 -4.836 1.00 1.25 ATOM 438 ND1 HIS 27 -2.977 -11.394 -3.461 1.00 1.25 ATOM 439 CE1 HIS 27 -3.895 -12.371 -3.360 1.00 1.25 ATOM 441 NE2 HIS 27 -4.242 -12.826 -4.574 1.00 1.25 ATOM 443 CD2 HIS 27 -3.531 -12.126 -5.518 1.00 1.25 ATOM 445 C HIS 27 -1.784 -7.575 -5.602 1.00 1.25 ATOM 446 O HIS 27 -0.577 -7.646 -5.852 1.00 1.25 ATOM 447 N CYS 28 -2.428 -6.409 -5.523 1.00 1.03 ATOM 449 CA CYS 28 -1.767 -5.124 -5.720 1.00 1.03 ATOM 451 CB CYS 28 -2.312 -4.473 -6.999 1.00 1.03 ATOM 454 SG CYS 28 -1.081 -3.295 -7.634 1.00 1.03 ATOM 456 C CYS 28 -1.904 -4.250 -4.476 1.00 1.03 ATOM 457 O CYS 28 -2.752 -4.461 -3.608 1.00 1.03 ATOM 458 N VAL 29 -1.048 -3.244 -4.394 1.00 0.97 ATOM 460 CA VAL 29 -1.073 -2.206 -3.371 1.00 0.97 ATOM 462 CB VAL 29 0.172 -2.298 -2.467 1.00 0.97 ATOM 464 CG1 VAL 29 0.236 -1.160 -1.442 1.00 0.97 ATOM 468 CG2 VAL 29 0.197 -3.627 -1.702 1.00 0.97 ATOM 472 C VAL 29 -1.124 -0.876 -4.095 1.00 0.97 ATOM 473 O VAL 29 -0.353 -0.634 -5.030 1.00 0.97 ATOM 474 N GLU 30 -2.023 -0.006 -3.653 1.00 0.85 ATOM 476 CA GLU 30 -2.262 1.285 -4.290 1.00 0.85 ATOM 478 CB GLU 30 -3.628 1.263 -4.980 1.00 0.85 ATOM 481 CG GLU 30 -3.872 2.522 -5.819 1.00 0.85 ATOM 484 CD GLU 30 -5.236 2.501 -6.522 1.00 0.85 ATOM 485 OE1 GLU 30 -5.415 3.324 -7.447 1.00 0.85 ATOM 486 OE2 GLU 30 -6.131 1.723 -6.123 1.00 0.85 ATOM 487 C GLU 30 -2.124 2.405 -3.258 1.00 0.85 ATOM 488 O GLU 30 -2.932 2.553 -2.343 1.00 0.85 ATOM 489 N VAL 31 -1.054 3.175 -3.415 1.00 0.71 ATOM 491 CA VAL 31 -0.725 4.304 -2.555 1.00 0.71 ATOM 493 CB VAL 31 0.810 4.426 -2.398 1.00 0.71 ATOM 495 CG1 VAL 31 1.227 5.591 -1.488 1.00 0.71 ATOM 499 CG2 VAL 31 1.456 3.155 -1.827 1.00 0.71 ATOM 503 C VAL 31 -1.258 5.572 -3.212 1.00 0.71 ATOM 504 O VAL 31 -1.123 5.744 -4.422 1.00 0.71 ATOM 505 N ARG 32 -1.773 6.521 -2.428 1.00 0.88 ATOM 507 CA ARG 32 -1.922 7.900 -2.895 1.00 0.88 ATOM 509 CB ARG 32 -3.362 8.242 -3.282 1.00 0.88 ATOM 512 CG ARG 32 -3.361 9.522 -4.149 1.00 0.88 ATOM 515 CD ARG 32 -4.751 10.024 -4.557 1.00 0.88 ATOM 518 NE ARG 32 -5.562 10.380 -3.381 1.00 0.88 ATOM 520 CZ ARG 32 -6.330 9.555 -2.687 1.00 0.88 ATOM 521 NH1 ARG 32 -6.824 9.913 -1.547 1.00 0.88 ATOM 524 NH2 ARG 32 -6.573 8.339 -3.071 1.00 0.88 ATOM 527 C ARG 32 -1.369 8.881 -1.877 1.00 0.88 ATOM 528 O ARG 32 -1.920 9.053 -0.791 1.00 0.88 ATOM 529 N CYS 33 -0.287 9.538 -2.262 1.00 1.46 ATOM 531 CA CYS 33 0.360 10.602 -1.526 1.00 1.46 ATOM 533 CB CYS 33 1.878 10.460 -1.697 1.00 1.46 ATOM 536 SG CYS 33 2.599 9.013 -0.889 1.00 1.46 ATOM 537 C CYS 33 -0.123 11.976 -2.008 1.00 1.46 ATOM 538 O CYS 33 0.362 12.508 -3.006 1.00 1.46 ATOM 539 N SER 34 -1.066 12.572 -1.269 1.00 1.90 ATOM 541 CA SER 34 -1.814 13.785 -1.652 1.00 1.90 ATOM 543 CB SER 34 -0.971 15.056 -1.460 1.00 1.90 ATOM 546 OG SER 34 0.140 15.110 -2.330 1.00 1.90 ATOM 548 C SER 34 -2.527 13.648 -3.019 1.00 1.90 ATOM 549 O SER 34 -3.481 12.871 -3.098 1.00 1.90 ATOM 550 N ASP 35 -2.089 14.358 -4.068 1.00 2.75 ATOM 552 CA ASP 35 -2.473 14.045 -5.457 1.00 2.75 ATOM 554 CB ASP 35 -2.072 15.187 -6.396 1.00 2.75 ATOM 557 CG ASP 35 -2.275 14.741 -7.844 1.00 2.75 ATOM 558 OD1 ASP 35 -1.244 14.465 -8.496 1.00 2.75 ATOM 559 OD2 ASP 35 -3.452 14.612 -8.240 1.00 2.75 ATOM 560 C ASP 35 -1.824 12.709 -5.914 1.00 2.75 ATOM 561 O ASP 35 -2.503 11.739 -6.254 1.00 2.75 ATOM 562 N THR 36 -0.487 12.645 -5.883 1.00 1.95 ATOM 564 CA THR 36 0.326 11.660 -6.620 1.00 1.95 ATOM 566 CB THR 36 1.826 11.972 -6.495 1.00 1.95 ATOM 568 CG2 THR 36 2.178 13.326 -7.107 1.00 1.95 ATOM 572 OG1 THR 36 2.279 12.010 -5.158 1.00 1.95 ATOM 574 C THR 36 0.049 10.190 -6.250 1.00 1.95 ATOM 575 O THR 36 0.329 9.727 -5.140 1.00 1.95 ATOM 576 N LYS 37 -0.492 9.413 -7.194 1.00 1.64 ATOM 578 CA LYS 37 -0.641 7.949 -7.098 1.00 1.64 ATOM 580 CB LYS 37 -1.626 7.469 -8.184 1.00 1.64 ATOM 583 CG LYS 37 -3.113 7.599 -7.826 1.00 1.64 ATOM 586 CD LYS 37 -3.547 6.525 -6.810 1.00 1.64 ATOM 589 CE LYS 37 -5.062 6.508 -6.597 1.00 1.64 ATOM 592 NZ LYS 37 -5.771 5.914 -7.757 1.00 1.64 ATOM 596 C LYS 37 0.680 7.209 -7.328 1.00 1.64 ATOM 597 O LYS 37 1.380 7.506 -8.296 1.00 1.64 ATOM 598 N TYR 38 0.913 6.148 -6.549 1.00 1.14 ATOM 600 CA TYR 38 1.901 5.094 -6.821 1.00 1.14 ATOM 602 CB TYR 38 3.102 5.153 -5.848 1.00 1.14 ATOM 605 CG TYR 38 3.615 6.527 -5.438 1.00 1.14 ATOM 606 CD1 TYR 38 3.923 6.784 -4.087 1.00 1.14 ATOM 608 CE1 TYR 38 4.335 8.068 -3.685 1.00 1.14 ATOM 610 CZ TYR 38 4.384 9.121 -4.620 1.00 1.14 ATOM 611 OH TYR 38 4.658 10.384 -4.201 1.00 1.14 ATOM 613 CE2 TYR 38 4.127 8.856 -5.980 1.00 1.14 ATOM 615 CD2 TYR 38 3.789 7.551 -6.390 1.00 1.14 ATOM 617 C TYR 38 1.215 3.721 -6.765 1.00 1.14 ATOM 618 O TYR 38 0.181 3.533 -6.115 1.00 1.14 ATOM 619 N THR 39 1.803 2.734 -7.436 1.00 1.23 ATOM 621 CA THR 39 1.218 1.393 -7.563 1.00 1.23 ATOM 623 CB THR 39 0.391 1.282 -8.853 1.00 1.23 ATOM 625 CG2 THR 39 -0.384 -0.029 -8.938 1.00 1.23 ATOM 629 OG1 THR 39 -0.569 2.318 -8.903 1.00 1.23 ATOM 631 C THR 39 2.325 0.350 -7.526 1.00 1.23 ATOM 632 O THR 39 3.334 0.478 -8.215 1.00 1.23 ATOM 633 N LEU 40 2.157 -0.646 -6.651 1.00 1.37 ATOM 635 CA LEU 40 3.210 -1.569 -6.226 1.00 1.37 ATOM 637 CB LEU 40 3.826 -1.088 -4.891 1.00 1.37 ATOM 640 CG LEU 40 4.527 0.291 -4.985 1.00 1.37 ATOM 642 CD1 LEU 40 3.682 1.426 -4.396 1.00 1.37 ATOM 646 CD2 LEU 40 5.866 0.299 -4.248 1.00 1.37 ATOM 650 C LEU 40 2.664 -3.000 -6.149 1.00 1.37 ATOM 651 O LEU 40 1.781 -3.303 -5.356 1.00 1.37 ATOM 652 N CYS 41 3.159 -3.875 -7.023 1.00 1.87 ATOM 654 CA CYS 41 2.543 -5.168 -7.329 1.00 1.87 ATOM 656 CB CYS 41 3.381 -5.859 -8.416 1.00 1.87 ATOM 659 SG CYS 41 3.555 -4.785 -9.872 1.00 1.87 ATOM 661 C CYS 41 2.326 -6.079 -6.111 1.00 1.87 ATOM 662 O CYS 41 2.646 -5.748 -4.969 1.00 1.87 TER END