####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS406_5 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS406_5.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 34 8 - 41 4.93 6.82 LCS_AVERAGE: 81.68 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 1 - 18 1.74 7.79 LCS_AVERAGE: 32.06 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 2 - 16 0.84 8.45 LCS_AVERAGE: 22.55 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 18 31 3 3 4 11 17 18 20 21 23 25 26 28 29 31 33 36 37 39 41 41 LCS_GDT Q 2 Q 2 15 18 31 8 15 15 16 17 18 20 21 23 25 26 28 29 31 33 34 37 39 41 41 LCS_GDT E 3 E 3 15 18 31 8 15 15 16 17 18 20 21 23 25 26 28 29 31 33 36 37 39 41 41 LCS_GDT T 4 T 4 15 18 31 8 15 15 16 17 18 20 21 23 25 26 28 29 31 33 36 38 39 41 41 LCS_GDT R 5 R 5 15 18 31 10 15 15 16 17 18 20 21 23 25 26 28 29 31 33 36 38 39 41 41 LCS_GDT K 6 K 6 15 18 31 10 15 15 16 17 18 20 21 23 25 26 28 29 31 33 36 38 39 41 41 LCS_GDT K 7 K 7 15 18 31 10 15 15 16 17 18 20 21 23 25 26 28 29 31 33 36 38 39 41 41 LCS_GDT C 8 C 8 15 18 34 10 15 15 16 17 18 20 21 23 25 26 28 29 32 34 36 38 39 41 41 LCS_GDT T 9 T 9 15 18 34 10 15 15 16 17 18 20 21 23 25 26 28 29 32 34 36 38 39 41 41 LCS_GDT E 10 E 10 15 18 34 10 15 15 16 17 18 20 21 23 25 26 28 29 32 34 36 38 39 41 41 LCS_GDT M 11 M 11 15 18 34 10 15 15 16 17 18 20 21 23 25 26 28 30 32 34 36 38 39 41 41 LCS_GDT K 12 K 12 15 18 34 10 15 15 16 17 18 20 21 23 25 26 28 30 32 34 36 38 39 41 41 LCS_GDT K 13 K 13 15 18 34 10 15 15 16 17 18 20 21 23 25 26 28 30 32 34 36 38 39 41 41 LCS_GDT K 14 K 14 15 18 34 10 15 15 16 17 18 20 21 23 25 26 28 30 32 34 36 38 39 41 41 LCS_GDT F 15 F 15 15 18 34 10 15 15 16 17 18 20 21 23 25 26 28 30 32 34 36 38 39 41 41 LCS_GDT K 16 K 16 15 18 34 3 5 13 16 17 18 20 21 23 25 26 28 30 32 34 36 38 39 41 41 LCS_GDT N 17 N 17 7 18 34 3 6 8 10 16 18 20 21 23 25 26 28 30 32 34 36 38 39 41 41 LCS_GDT C 18 C 18 7 18 34 3 6 8 9 15 18 20 21 23 25 26 28 30 32 34 36 38 39 41 41 LCS_GDT E 19 E 19 7 17 34 3 6 8 9 12 13 18 19 23 25 26 28 29 32 34 36 38 39 41 41 LCS_GDT V 20 V 20 6 13 34 3 6 7 9 12 12 13 15 18 21 24 27 30 32 34 36 38 39 41 41 LCS_GDT R 21 R 21 6 13 34 3 6 8 9 12 12 13 15 18 21 23 27 30 32 34 36 38 39 41 41 LCS_GDT C 22 C 22 6 13 34 3 6 8 9 12 12 13 15 18 23 26 27 30 32 34 36 38 39 41 41 LCS_GDT D 23 D 23 5 13 34 3 5 8 9 12 12 13 15 18 21 26 27 30 32 34 36 38 39 41 41 LCS_GDT E 24 E 24 4 13 34 3 3 8 9 12 12 13 15 19 23 26 27 30 32 34 36 38 39 41 41 LCS_GDT S 25 S 25 3 9 34 3 3 5 7 8 13 14 18 20 23 26 27 30 32 34 36 38 39 41 41 LCS_GDT N 26 N 26 4 9 34 3 3 4 8 9 9 11 14 18 23 26 27 30 32 34 36 38 39 41 41 LCS_GDT H 27 H 27 7 9 34 4 5 7 8 9 13 15 19 20 25 26 28 30 32 34 36 38 39 41 41 LCS_GDT C 28 C 28 7 9 34 4 6 7 8 9 13 15 19 23 25 26 28 30 32 34 36 38 39 41 41 LCS_GDT V 29 V 29 7 9 34 4 6 7 8 9 10 13 19 20 25 26 28 30 32 34 36 38 39 41 41 LCS_GDT E 30 E 30 7 9 34 8 15 15 16 17 18 20 21 23 25 26 28 30 32 34 36 38 39 41 41 LCS_GDT V 31 V 31 7 9 34 3 6 7 8 9 9 16 20 22 24 26 28 30 32 34 36 38 39 41 41 LCS_GDT R 32 R 32 7 9 34 3 6 7 8 9 10 14 19 22 23 26 28 30 32 34 36 38 39 41 41 LCS_GDT C 33 C 33 7 9 34 3 6 7 8 9 10 14 19 20 23 26 27 30 32 34 36 38 39 41 41 LCS_GDT S 34 S 34 7 9 34 3 4 7 8 9 9 12 16 20 23 26 27 30 32 34 35 38 39 41 41 LCS_GDT D 35 D 35 4 7 34 3 3 4 4 8 10 14 19 20 23 26 27 30 32 34 35 38 38 41 41 LCS_GDT T 36 T 36 6 6 34 5 6 6 6 6 7 14 19 20 23 26 27 30 32 34 36 38 39 41 41 LCS_GDT K 37 K 37 6 6 34 5 6 6 6 7 10 14 19 20 23 26 27 30 32 34 36 38 39 41 41 LCS_GDT Y 38 Y 38 6 6 34 5 6 6 6 7 12 16 19 22 23 26 28 30 32 34 36 38 39 41 41 LCS_GDT T 39 T 39 6 6 34 5 6 6 9 16 17 20 20 22 24 26 28 30 32 34 36 38 39 41 41 LCS_GDT L 40 L 40 6 6 34 5 6 6 6 11 16 20 21 23 25 26 28 30 32 34 36 38 39 41 41 LCS_GDT C 41 C 41 6 6 34 3 6 6 7 11 14 20 21 23 25 26 28 30 32 34 36 38 39 41 41 LCS_AVERAGE LCS_A: 45.43 ( 22.55 32.06 81.68 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 15 15 16 17 18 20 21 23 25 26 28 30 32 34 36 38 39 41 41 GDT PERCENT_AT 24.39 36.59 36.59 39.02 41.46 43.90 48.78 51.22 56.10 60.98 63.41 68.29 73.17 78.05 82.93 87.80 92.68 95.12 100.00 100.00 GDT RMS_LOCAL 0.29 0.62 0.62 0.88 1.31 1.59 2.09 2.13 2.57 2.92 3.17 3.62 4.53 4.79 4.93 5.30 5.55 5.68 5.98 5.98 GDT RMS_ALL_AT 8.87 8.64 8.64 8.48 8.19 7.90 8.01 7.91 7.97 8.00 7.37 7.25 7.39 6.61 6.82 6.07 6.17 6.07 5.98 5.98 # Checking swapping # possible swapping detected: F 15 F 15 # possible swapping detected: D 23 D 23 # possible swapping detected: E 24 E 24 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 2.678 0 0.024 0.653 5.054 19.091 13.333 4.725 LGA Q 2 Q 2 1.660 0 0.226 0.932 5.894 65.909 36.970 5.894 LGA E 3 E 3 1.243 0 0.062 1.111 5.789 65.455 37.778 5.398 LGA T 4 T 4 1.525 0 0.035 1.066 3.679 61.818 46.753 3.025 LGA R 5 R 5 1.492 0 0.008 0.989 4.073 61.818 49.752 4.073 LGA K 6 K 6 1.323 0 0.018 1.117 5.207 65.455 45.859 4.881 LGA K 7 K 7 1.152 0 0.033 0.770 3.294 69.545 51.717 3.294 LGA C 8 C 8 1.292 0 0.031 0.044 2.074 65.455 58.485 2.074 LGA T 9 T 9 1.065 0 0.026 0.928 3.358 73.636 59.481 2.459 LGA E 10 E 10 0.215 0 0.017 0.257 2.184 95.455 76.364 2.184 LGA M 11 M 11 0.277 0 0.039 0.631 2.097 90.909 78.864 0.944 LGA K 12 K 12 1.712 0 0.022 0.683 3.511 51.364 41.616 3.511 LGA K 13 K 13 2.170 0 0.022 0.676 3.767 41.364 33.131 3.294 LGA K 14 K 14 1.635 0 0.009 0.120 1.702 50.909 57.374 1.410 LGA F 15 F 15 1.589 0 0.427 1.400 8.437 55.000 23.471 8.266 LGA K 16 K 16 1.169 0 0.073 1.098 5.528 56.364 37.778 5.528 LGA N 17 N 17 3.085 0 0.070 1.107 5.369 20.455 15.227 5.369 LGA C 18 C 18 3.899 0 0.036 0.778 4.175 15.455 12.121 4.082 LGA E 19 E 19 5.445 0 0.190 0.814 10.907 0.000 0.000 10.703 LGA V 20 V 20 7.896 0 0.156 0.233 10.223 0.000 0.000 10.223 LGA R 21 R 21 9.620 0 0.015 1.033 16.937 0.000 0.000 13.669 LGA C 22 C 22 11.292 0 0.043 0.813 11.625 0.000 0.000 10.925 LGA D 23 D 23 13.248 0 0.137 0.777 14.257 0.000 0.000 12.784 LGA E 24 E 24 14.537 0 0.211 0.283 16.700 0.000 0.000 14.887 LGA S 25 S 25 10.510 0 0.576 0.909 12.453 0.000 0.000 10.012 LGA N 26 N 26 9.924 0 0.247 0.594 11.272 0.000 0.000 7.581 LGA H 27 H 27 7.616 0 0.404 1.108 9.940 0.000 0.000 9.188 LGA C 28 C 28 6.118 0 0.097 0.128 9.633 10.909 7.273 9.633 LGA V 29 V 29 4.996 0 0.094 0.250 8.699 1.818 1.039 8.640 LGA E 30 E 30 2.671 0 0.015 0.790 5.956 11.818 13.939 5.032 LGA V 31 V 31 6.722 0 0.057 1.126 9.364 0.909 0.519 9.364 LGA R 32 R 32 8.549 0 0.227 1.315 15.808 0.000 0.000 15.808 LGA C 33 C 33 12.247 0 0.502 0.930 13.600 0.000 0.000 12.104 LGA S 34 S 34 16.354 0 0.114 0.113 18.480 0.000 0.000 16.496 LGA D 35 D 35 18.881 0 0.654 0.510 20.521 0.000 0.000 19.763 LGA T 36 T 36 15.718 0 0.515 1.386 17.231 0.000 0.000 17.231 LGA K 37 K 37 13.615 0 0.030 1.508 15.777 0.000 0.000 15.777 LGA Y 38 Y 38 9.068 0 0.037 1.443 11.640 0.000 0.000 11.640 LGA T 39 T 39 5.799 0 0.162 1.183 8.307 0.455 0.260 8.072 LGA L 40 L 40 3.337 0 0.598 0.982 7.230 20.455 12.727 4.901 LGA C 41 C 41 4.046 0 0.251 0.385 7.335 9.545 6.234 7.335 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 5.976 5.888 6.971 26.375 19.953 8.381 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 21 2.13 53.659 47.704 0.940 LGA_LOCAL RMSD: 2.134 Number of atoms: 21 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 7.908 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 5.976 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.743328 * X + 0.137291 * Y + -0.654686 * Z + 0.423661 Y_new = -0.663174 * X + 0.279328 * Y + -0.694389 * Z + -0.271268 Z_new = 0.087539 * X + 0.950330 * Y + 0.298680 * Z + -0.607849 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.728472 -0.087651 1.266280 [DEG: -41.7383 -5.0220 72.5525 ] ZXZ: -0.755977 1.267487 0.091855 [DEG: -43.3143 72.6216 5.2629 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS406_5 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS406_5.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 21 2.13 47.704 5.98 REMARK ---------------------------------------------------------- MOLECULE T0955TS406_5 PFRMAT TS TARGET T0955 MODEL 5 PARENT N/A ATOM 1 CB SER 1 -1.026 -12.656 -2.166 1.00 28.99 C ATOM 2 OG SER 1 0.278 -13.202 -2.283 1.00 31.05 O ATOM 4 C SER 1 -0.924 -12.312 0.314 1.00 24.36 C ATOM 5 O SER 1 -1.140 -11.116 0.548 1.00 23.50 O ATOM 8 N SER 1 -3.110 -12.609 -0.819 1.00 30.45 N ATOM 10 CA SER 1 -1.676 -13.015 -0.821 1.00 27.97 C ATOM 11 N GLN 2 -0.075 -13.067 1.027 1.00 26.45 N ATOM 13 CA GLN 2 0.754 -12.549 2.137 1.00 24.65 C ATOM 14 CB GLN 2 1.383 -13.680 2.952 1.00 27.13 C ATOM 15 CG GLN 2 0.392 -14.512 3.760 1.00 28.15 C ATOM 16 CD GLN 2 1.067 -15.616 4.551 1.00 28.73 C ATOM 17 OE1 GLN 2 1.220 -16.737 4.066 1.00 31.75 O ATOM 18 NE2 GLN 2 1.473 -15.304 5.777 1.00 31.20 N ATOM 21 C GLN 2 1.856 -11.609 1.632 1.00 23.37 C ATOM 22 O GLN 2 2.154 -10.607 2.285 1.00 23.20 O ATOM 23 N GLU 3 2.422 -11.930 0.456 1.00 24.32 N ATOM 25 CA GLU 3 3.491 -11.141 -0.195 1.00 23.90 C ATOM 26 CB GLU 3 4.087 -11.903 -1.385 1.00 25.80 C ATOM 27 CG GLU 3 4.896 -13.143 -1.010 1.00 29.39 C ATOM 28 CD GLU 3 5.463 -13.861 -2.221 1.00 28.73 C ATOM 29 OE1 GLU 3 4.779 -14.755 -2.761 1.00 31.59 O ATOM 30 OE2 GLU 3 6.596 -13.531 -2.632 1.00 30.60 O ATOM 31 C GLU 3 2.980 -9.766 -0.656 1.00 21.81 C ATOM 32 O GLU 3 3.671 -8.755 -0.469 1.00 22.46 O ATOM 33 N THR 4 1.768 -9.742 -1.236 1.00 21.69 N ATOM 35 CA THR 4 1.099 -8.508 -1.706 1.00 21.84 C ATOM 36 CB THR 4 -0.163 -8.801 -2.581 1.00 25.04 C ATOM 37 OG1 THR 4 -1.115 -9.564 -1.827 1.00 27.25 O ATOM 39 CG2 THR 4 0.214 -9.559 -3.851 1.00 29.46 C ATOM 40 C THR 4 0.705 -7.671 -0.473 1.00 20.84 C ATOM 41 O THR 4 0.809 -6.439 -0.491 1.00 20.05 O ATOM 42 N ARG 5 0.296 -8.374 0.597 1.00 21.47 N ATOM 44 CA ARG 5 -0.105 -7.793 1.894 1.00 23.81 C ATOM 45 CB ARG 5 -0.759 -8.860 2.781 1.00 26.01 C ATOM 46 CG ARG 5 -1.955 -8.372 3.617 1.00 30.24 C ATOM 47 CD ARG 5 -2.553 -9.486 4.475 1.00 30.38 C ATOM 48 NE ARG 5 -3.239 -10.510 3.681 1.00 28.53 N ATOM 50 CZ ARG 5 -3.846 -11.589 4.177 1.00 28.86 C ATOM 51 NH1 ARG 5 -4.434 -12.446 3.353 1.00 31.20 N ATOM 54 NH2 ARG 5 -3.872 -11.823 5.486 1.00 31.83 N ATOM 57 C ARG 5 1.126 -7.184 2.600 1.00 22.87 C ATOM 58 O ARG 5 1.010 -6.142 3.250 1.00 23.81 O ATOM 59 N LYS 6 2.287 -7.842 2.443 1.00 22.70 N ATOM 61 CA LYS 6 3.587 -7.418 3.012 1.00 24.84 C ATOM 62 CB LYS 6 4.654 -8.486 2.767 1.00 27.01 C ATOM 63 CG LYS 6 4.689 -9.589 3.815 1.00 28.41 C ATOM 64 CD LYS 6 5.776 -10.615 3.506 1.00 29.81 C ATOM 65 CE LYS 6 5.828 -11.730 4.546 1.00 30.82 C ATOM 66 NZ LYS 6 6.306 -11.276 5.887 1.00 31.99 N ATOM 70 C LYS 6 4.043 -6.102 2.370 1.00 23.37 C ATOM 71 O LYS 6 4.511 -5.191 3.064 1.00 24.09 O ATOM 72 N LYS 7 3.880 -6.032 1.042 1.00 21.73 N ATOM 74 CA LYS 7 4.213 -4.865 0.206 1.00 20.30 C ATOM 75 CB LYS 7 4.129 -5.242 -1.278 1.00 19.98 C ATOM 76 CG LYS 7 5.215 -6.209 -1.741 1.00 23.81 C ATOM 77 CD LYS 7 4.970 -6.681 -3.167 1.00 24.09 C ATOM 78 CE LYS 7 6.048 -7.651 -3.646 1.00 29.46 C ATOM 79 NZ LYS 7 6.015 -8.973 -2.952 1.00 30.45 N ATOM 83 C LYS 7 3.234 -3.723 0.536 1.00 17.21 C ATOM 84 O LYS 7 3.627 -2.554 0.590 1.00 16.28 O ATOM 85 N CYS 8 1.974 -4.105 0.804 1.00 17.57 N ATOM 87 CA CYS 8 0.860 -3.205 1.164 1.00 20.01 C ATOM 88 CB CYS 8 -0.467 -3.983 1.116 1.00 23.95 C ATOM 89 SG CYS 8 -1.962 -2.973 1.311 1.00 29.26 S ATOM 90 C CYS 8 1.057 -2.566 2.553 1.00 20.98 C ATOM 91 O CYS 8 0.874 -1.355 2.708 1.00 21.36 O ATOM 92 N THR 9 1.453 -3.396 3.530 1.00 21.69 N ATOM 94 CA THR 9 1.709 -3.006 4.933 1.00 24.36 C ATOM 95 CB THR 9 1.819 -4.259 5.852 1.00 28.09 C ATOM 96 OG1 THR 9 2.715 -5.212 5.270 1.00 28.53 O ATOM 98 CG2 THR 9 0.452 -4.895 6.074 1.00 31.28 C ATOM 99 C THR 9 2.957 -2.113 5.107 1.00 24.09 C ATOM 100 O THR 9 2.918 -1.121 5.850 1.00 26.12 O ATOM 101 N GLU 10 4.031 -2.449 4.374 1.00 22.83 N ATOM 103 CA GLU 10 5.321 -1.727 4.382 1.00 23.37 C ATOM 104 CB GLU 10 6.383 -2.550 3.632 1.00 23.33 C ATOM 105 CG GLU 10 7.783 -2.531 4.259 1.00 27.78 C ATOM 106 CD GLU 10 8.785 -3.358 3.477 1.00 28.22 C ATOM 107 OE1 GLU 10 8.924 -4.565 3.773 1.00 31.51 O ATOM 108 OE2 GLU 10 9.438 -2.802 2.568 1.00 28.92 O ATOM 109 C GLU 10 5.149 -0.326 3.747 1.00 20.30 C ATOM 110 O GLU 10 5.619 0.676 4.303 1.00 22.07 O ATOM 111 N MET 11 4.448 -0.281 2.604 1.00 17.35 N ATOM 113 CA MET 11 4.148 0.955 1.859 1.00 16.89 C ATOM 114 CG MET 11 4.726 0.437 -0.614 1.00 16.91 C ATOM 115 SD MET 11 5.822 -0.999 -0.415 1.00 17.72 S ATOM 116 CE MET 11 7.341 -0.205 0.122 1.00 21.55 C ATOM 117 C MET 11 3.168 1.878 2.603 1.00 18.33 C ATOM 118 O MET 11 3.299 3.102 2.521 1.00 19.25 O ATOM 119 CB MET 11 3.635 0.636 0.450 1.00 16.85 C ATOM 120 N LYS 12 2.203 1.278 3.320 1.00 19.92 N ATOM 122 CA LYS 12 1.182 1.994 4.121 1.00 23.25 C ATOM 123 CB LYS 12 0.097 1.022 4.607 1.00 25.19 C ATOM 124 CG LYS 12 -1.340 1.516 4.426 1.00 28.34 C ATOM 125 CD LYS 12 -2.347 0.493 4.938 1.00 30.16 C ATOM 126 CE LYS 12 -3.789 0.969 4.771 1.00 31.75 C ATOM 127 NZ LYS 12 -4.146 2.117 5.659 1.00 32.24 N ATOM 131 C LYS 12 1.837 2.702 5.325 1.00 23.90 C ATOM 132 O LYS 12 1.422 3.808 5.694 1.00 26.84 O ATOM 133 N LYS 13 2.849 2.050 5.921 1.00 23.08 N ATOM 135 CA LYS 13 3.624 2.574 7.067 1.00 24.04 C ATOM 136 CB LYS 13 4.526 1.469 7.647 1.00 26.18 C ATOM 137 CG LYS 13 4.742 1.528 9.164 1.00 28.34 C ATOM 138 CD LYS 13 5.645 0.396 9.640 1.00 30.53 C ATOM 139 CE LYS 13 5.873 0.434 11.149 1.00 31.20 C ATOM 140 NZ LYS 13 4.650 0.112 11.945 1.00 31.91 N ATOM 144 C LYS 13 4.465 3.775 6.576 1.00 25.44 C ATOM 145 O LYS 13 4.565 4.793 7.269 1.00 29.06 O ATOM 146 N LYS 14 5.058 3.618 5.382 1.00 24.99 N ATOM 148 CA LYS 14 5.878 4.632 4.684 1.00 27.48 C ATOM 149 CB LYS 14 6.652 3.999 3.520 1.00 27.66 C ATOM 150 CG LYS 14 7.791 3.077 3.942 1.00 29.81 C ATOM 151 CD LYS 14 8.522 2.507 2.731 1.00 28.86 C ATOM 152 CE LYS 14 9.687 1.605 3.133 1.00 30.02 C ATOM 153 NZ LYS 14 9.261 0.327 3.777 1.00 28.34 N ATOM 157 C LYS 14 5.032 5.816 4.172 1.00 25.14 C ATOM 158 O LYS 14 5.501 6.960 4.151 1.00 28.53 O ATOM 159 N PHE 15 3.785 5.505 3.781 1.00 21.99 N ATOM 161 CA PHE 15 2.773 6.440 3.233 1.00 23.95 C ATOM 162 CB PHE 15 1.474 5.663 2.887 1.00 25.44 C ATOM 163 CG PHE 15 0.714 6.181 1.664 1.00 26.84 C ATOM 164 CD1 PHE 15 -0.321 7.136 1.806 1.00 29.06 C ATOM 165 CD2 PHE 15 0.995 5.681 0.370 1.00 26.01 C ATOM 166 CE1 PHE 15 -1.064 7.587 0.681 1.00 28.28 C ATOM 167 CE2 PHE 15 0.261 6.121 -0.765 1.00 28.60 C ATOM 168 CZ PHE 15 -0.772 7.077 -0.607 1.00 29.12 C ATOM 169 C PHE 15 2.439 7.625 4.159 1.00 24.94 C ATOM 170 O PHE 15 2.144 8.720 3.668 1.00 25.70 O ATOM 171 N LYS 16 2.477 7.387 5.479 1.00 25.34 N ATOM 173 CA LYS 16 2.189 8.378 6.550 1.00 27.36 C ATOM 174 CB LYS 16 2.498 7.766 7.928 1.00 29.39 C ATOM 175 CG LYS 16 1.550 6.653 8.361 1.00 29.19 C ATOM 176 CD LYS 16 1.929 6.104 9.731 1.00 30.31 C ATOM 177 CE LYS 16 0.992 4.986 10.185 1.00 30.38 C ATOM 178 NZ LYS 16 -0.393 5.453 10.492 1.00 32.40 N ATOM 182 C LYS 16 2.874 9.767 6.425 1.00 26.96 C ATOM 183 O LYS 16 2.559 10.690 7.192 1.00 31.75 O ATOM 184 N ASN 17 3.759 9.905 5.426 1.00 24.99 N ATOM 186 CA ASN 17 4.508 11.141 5.120 1.00 26.23 C ATOM 187 CB ASN 17 5.745 10.798 4.262 1.00 27.97 C ATOM 188 CG ASN 17 6.896 11.792 4.445 1.00 27.97 C ATOM 189 OD1 ASN 17 7.761 11.608 5.303 1.00 30.60 O ATOM 190 ND2 ASN 17 6.913 12.839 3.624 1.00 30.75 N ATOM 193 C ASN 17 3.600 12.154 4.379 1.00 26.50 C ATOM 194 O ASN 17 3.650 13.356 4.665 1.00 30.82 O ATOM 195 N CYS 18 2.788 11.644 3.441 1.00 25.65 N ATOM 197 CA CYS 18 1.837 12.433 2.633 1.00 27.42 C ATOM 198 CB CYS 18 2.258 12.444 1.154 1.00 30.53 C ATOM 199 SG CYS 18 1.280 13.535 0.087 1.00 31.75 S ATOM 200 C CYS 18 0.444 11.801 2.775 1.00 24.79 C ATOM 201 O CYS 18 0.339 10.581 2.955 1.00 25.09 O ATOM 202 N GLU 19 -0.608 12.630 2.699 1.00 26.96 N ATOM 204 CA GLU 19 -2.009 12.175 2.822 1.00 26.34 C ATOM 205 CB GLU 19 -2.756 12.985 3.897 1.00 28.99 C ATOM 206 CG GLU 19 -2.289 12.732 5.328 1.00 29.81 C ATOM 207 CD GLU 19 -3.055 13.552 6.349 1.00 29.88 C ATOM 208 OE1 GLU 19 -4.092 13.066 6.848 1.00 32.15 O ATOM 209 OE2 GLU 19 -2.619 14.682 6.655 1.00 32.82 O ATOM 210 C GLU 19 -2.785 12.222 1.493 1.00 26.45 C ATOM 211 O GLU 19 -2.801 13.254 0.808 1.00 30.75 O ATOM 212 N VAL 20 -3.383 11.076 1.131 1.00 25.14 N ATOM 214 CA VAL 20 -4.195 10.884 -0.093 1.00 25.44 C ATOM 215 CB VAL 20 -3.491 9.932 -1.162 1.00 26.18 C ATOM 216 CG1 VAL 20 -4.248 9.944 -2.504 1.00 29.67 C ATOM 217 CG2 VAL 20 -2.043 10.358 -1.404 1.00 28.79 C ATOM 218 C VAL 20 -5.534 10.269 0.376 1.00 25.86 C ATOM 219 O VAL 20 -5.550 9.478 1.329 1.00 29.74 O ATOM 220 N ARG 21 -6.636 10.661 -0.279 1.00 26.34 N ATOM 222 CA ARG 21 -7.994 10.175 0.039 1.00 26.45 C ATOM 223 CB ARG 21 -8.961 11.351 0.258 1.00 28.47 C ATOM 224 CG ARG 21 -8.692 12.176 1.519 1.00 29.88 C ATOM 225 CD ARG 21 -9.683 13.329 1.679 1.00 30.75 C ATOM 226 NE ARG 21 -11.041 12.875 1.997 1.00 30.31 N ATOM 228 CZ ARG 21 -12.092 13.672 2.192 1.00 30.24 C ATOM 229 NH1 ARG 21 -11.978 14.995 2.108 1.00 31.83 N ATOM 232 NH2 ARG 21 -13.273 13.140 2.474 1.00 32.91 N ATOM 235 C ARG 21 -8.542 9.236 -1.052 1.00 26.62 C ATOM 236 O ARG 21 -8.482 9.562 -2.246 1.00 30.09 O ATOM 237 N CYS 22 -9.033 8.065 -0.622 1.00 27.30 N ATOM 239 CA CYS 22 -9.603 7.025 -1.499 1.00 27.66 C ATOM 240 CB CYS 22 -8.807 5.716 -1.360 1.00 29.39 C ATOM 241 SG CYS 22 -9.262 4.409 -2.531 1.00 30.60 S ATOM 242 C CYS 22 -11.081 6.784 -1.143 1.00 27.25 C ATOM 243 O CYS 22 -11.510 7.126 -0.034 1.00 31.51 O ATOM 244 N ASP 23 -11.839 6.200 -2.084 1.00 27.30 N ATOM 246 CA ASP 23 -13.271 5.892 -1.922 1.00 25.65 C ATOM 247 CB ASP 23 -14.060 6.373 -3.158 1.00 28.53 C ATOM 248 CG ASP 23 -15.516 6.730 -2.842 1.00 27.84 C ATOM 249 OD1 ASP 23 -16.386 5.836 -2.939 1.00 29.53 O ATOM 250 OD2 ASP 23 -15.788 7.905 -2.514 1.00 31.05 O ATOM 251 C ASP 23 -13.477 4.377 -1.705 1.00 25.49 C ATOM 252 O ASP 23 -12.758 3.564 -2.298 1.00 27.25 O ATOM 253 N GLU 24 -14.468 4.036 -0.861 1.00 28.22 N ATOM 255 CA GLU 24 -14.886 2.660 -0.466 1.00 28.73 C ATOM 256 CB GLU 24 -16.239 2.266 -1.123 1.00 29.46 C ATOM 257 CG GLU 24 -16.345 2.407 -2.656 1.00 27.01 C ATOM 258 CD GLU 24 -17.705 1.995 -3.188 1.00 28.41 C ATOM 259 OE1 GLU 24 -17.880 0.802 -3.517 1.00 31.36 O ATOM 260 OE2 GLU 24 -18.598 2.862 -3.279 1.00 31.13 O ATOM 261 C GLU 24 -13.875 1.484 -0.501 1.00 26.73 C ATOM 262 O GLU 24 -13.445 1.015 0.559 1.00 30.09 O ATOM 263 N SER 25 -13.497 1.046 -1.717 1.00 25.65 N ATOM 265 CA SER 25 -12.546 -0.063 -2.013 1.00 25.49 C ATOM 266 CB SER 25 -11.080 0.386 -1.843 1.00 25.70 C ATOM 267 OG SER 25 -10.827 0.850 -0.528 1.00 29.19 O ATOM 269 C SER 25 -12.771 -1.423 -1.316 1.00 24.99 C ATOM 270 O SER 25 -13.039 -1.472 -0.108 1.00 29.12 O ATOM 271 N ASN 26 -12.655 -2.510 -2.093 1.00 24.41 N ATOM 273 CA ASN 26 -12.827 -3.896 -1.614 1.00 26.67 C ATOM 274 CB ASN 26 -13.803 -4.688 -2.523 1.00 30.02 C ATOM 275 CG ASN 26 -13.623 -4.387 -4.015 1.00 27.72 C ATOM 276 OD1 ASN 26 -12.828 -5.032 -4.701 1.00 27.66 O ATOM 277 ND2 ASN 26 -14.372 -3.410 -4.518 1.00 30.75 N ATOM 280 C ASN 26 -11.489 -4.645 -1.415 1.00 26.96 C ATOM 281 O ASN 26 -11.121 -4.943 -0.271 1.00 30.31 O ATOM 282 N HIS 27 -10.782 -4.941 -2.517 1.00 25.49 N ATOM 284 CA HIS 27 -9.477 -5.632 -2.499 1.00 28.03 C ATOM 285 CG HIS 27 -10.210 -6.994 -4.565 1.00 28.03 C ATOM 286 CD2 HIS 27 -11.285 -7.677 -5.029 1.00 30.38 C ATOM 287 ND1 HIS 27 -9.762 -6.227 -5.621 1.00 27.66 N ATOM 289 CE1 HIS 27 -10.530 -6.436 -6.674 1.00 30.82 C ATOM 290 NE2 HIS 27 -11.462 -7.311 -6.341 1.00 30.60 N ATOM 292 C HIS 27 -8.365 -4.738 -3.077 1.00 25.91 C ATOM 293 O HIS 27 -7.317 -4.567 -2.445 1.00 29.33 O ATOM 294 CB HIS 27 -9.535 -7.009 -3.219 1.00 31.20 C ATOM 295 N CYS 28 -8.630 -4.160 -4.264 1.00 23.64 N ATOM 297 CA CYS 28 -7.746 -3.244 -5.037 1.00 25.34 C ATOM 298 CB CYS 28 -7.844 -1.799 -4.513 1.00 27.78 C ATOM 299 SG CYS 28 -9.501 -1.081 -4.608 1.00 29.74 S ATOM 300 C CYS 28 -6.260 -3.590 -5.234 1.00 24.36 C ATOM 301 O CYS 28 -5.610 -4.119 -4.324 1.00 25.34 O ATOM 302 N VAL 29 -5.744 -3.281 -6.434 1.00 26.12 N ATOM 304 CA VAL 29 -4.329 -3.486 -6.798 1.00 24.22 C ATOM 305 CB VAL 29 -4.155 -4.264 -8.168 1.00 28.60 C ATOM 306 CG1 VAL 29 -2.715 -4.779 -8.335 1.00 30.38 C ATOM 307 CG2 VAL 29 -5.132 -5.438 -8.257 1.00 31.36 C ATOM 308 C VAL 29 -3.767 -2.048 -6.895 1.00 25.54 C ATOM 309 O VAL 29 -4.338 -1.197 -7.596 1.00 29.95 O ATOM 310 N GLU 30 -2.692 -1.784 -6.143 1.00 23.86 N ATOM 312 CA GLU 30 -2.030 -0.469 -6.096 1.00 26.23 C ATOM 313 CB GLU 30 -2.234 0.215 -4.733 1.00 24.94 C ATOM 314 CG GLU 30 -3.662 0.679 -4.454 1.00 27.97 C ATOM 315 CD GLU 30 -3.807 1.347 -3.100 1.00 28.09 C ATOM 316 OE1 GLU 30 -3.638 2.582 -3.021 1.00 30.98 O ATOM 317 OE2 GLU 30 -4.093 0.636 -2.112 1.00 30.31 O ATOM 318 C GLU 30 -0.534 -0.609 -6.354 1.00 25.80 C ATOM 319 O GLU 30 0.080 -1.597 -5.930 1.00 23.95 O ATOM 320 N VAL 31 0.033 0.360 -7.085 1.00 27.30 N ATOM 322 CA VAL 31 1.469 0.394 -7.396 1.00 24.89 C ATOM 323 CB VAL 31 1.734 0.266 -8.982 1.00 29.06 C ATOM 324 CG1 VAL 31 1.099 1.426 -9.779 1.00 32.32 C ATOM 325 CG2 VAL 31 3.228 0.105 -9.300 1.00 30.38 C ATOM 326 C VAL 31 2.079 1.667 -6.753 1.00 24.99 C ATOM 327 O VAL 31 1.596 2.784 -6.982 1.00 30.31 O ATOM 328 N ARG 32 3.093 1.456 -5.905 1.00 22.62 N ATOM 330 CA ARG 32 3.842 2.521 -5.216 1.00 25.39 C ATOM 331 CB ARG 32 3.567 2.524 -3.698 1.00 23.86 C ATOM 332 CG ARG 32 3.445 3.926 -3.086 1.00 28.73 C ATOM 333 CD ARG 32 3.574 3.914 -1.568 1.00 26.50 C ATOM 334 NE ARG 32 4.945 3.637 -1.132 1.00 26.23 N ATOM 336 CZ ARG 32 5.479 4.022 0.027 1.00 26.67 C ATOM 337 NH1 ARG 32 4.771 4.715 0.915 1.00 27.01 N ATOM 340 NH2 ARG 32 6.739 3.715 0.299 1.00 27.13 N ATOM 343 C ARG 32 5.303 2.154 -5.505 1.00 23.90 C ATOM 344 O ARG 32 5.701 1.002 -5.287 1.00 20.17 O ATOM 345 N CYS 33 6.073 3.112 -6.031 1.00 27.25 N ATOM 347 CA CYS 33 7.481 2.891 -6.384 1.00 24.79 C ATOM 348 CB CYS 33 7.679 3.083 -7.896 1.00 28.34 C ATOM 349 SG CYS 33 9.343 2.726 -8.520 1.00 28.15 S ATOM 350 C CYS 33 8.471 3.744 -5.577 1.00 25.96 C ATOM 351 O CYS 33 8.276 4.956 -5.417 1.00 30.75 O ATOM 352 N SER 34 9.508 3.074 -5.052 1.00 23.68 N ATOM 354 CA SER 34 10.589 3.679 -4.254 1.00 26.96 C ATOM 355 CB SER 34 10.673 3.008 -2.874 1.00 29.39 C ATOM 356 OG SER 34 9.459 3.157 -2.156 1.00 29.46 O ATOM 358 C SER 34 11.914 3.508 -5.018 1.00 26.73 C ATOM 359 O SER 34 12.708 4.452 -5.109 1.00 30.98 O ATOM 360 N ASP 35 12.130 2.296 -5.555 1.00 25.19 N ATOM 362 CA ASP 35 13.313 1.915 -6.351 1.00 28.28 C ATOM 363 CB ASP 35 14.239 0.934 -5.579 1.00 30.24 C ATOM 364 CG ASP 35 13.478 -0.204 -4.881 1.00 28.34 C ATOM 365 OD1 ASP 35 13.090 -0.031 -3.705 1.00 30.24 O ATOM 366 OD2 ASP 35 13.285 -1.269 -5.507 1.00 30.24 O ATOM 367 C ASP 35 12.813 1.301 -7.673 1.00 26.39 C ATOM 368 O ASP 35 11.911 0.452 -7.645 1.00 22.87 O ATOM 369 N THR 36 13.407 1.723 -8.808 1.00 30.31 N ATOM 371 CA THR 36 13.068 1.300 -10.201 1.00 28.79 C ATOM 372 CB THR 36 14.009 0.125 -10.761 1.00 29.26 C ATOM 373 OG1 THR 36 13.601 -0.242 -12.086 1.00 31.36 O ATOM 375 CG2 THR 36 14.011 -1.123 -9.855 1.00 31.20 C ATOM 376 C THR 36 11.549 1.083 -10.471 1.00 26.18 C ATOM 377 O THR 36 10.896 1.973 -11.031 1.00 31.13 O ATOM 378 N LYS 37 11.017 -0.085 -10.075 1.00 23.99 N ATOM 380 CA LYS 37 9.587 -0.445 -10.189 1.00 25.39 C ATOM 381 CB LYS 37 9.293 -1.266 -11.465 1.00 29.95 C ATOM 382 CG LYS 37 9.298 -0.468 -12.765 1.00 28.47 C ATOM 383 CD LYS 37 8.997 -1.362 -13.963 1.00 30.98 C ATOM 384 CE LYS 37 8.994 -0.584 -15.278 1.00 31.91 C ATOM 385 NZ LYS 37 10.345 -0.093 -15.684 1.00 32.48 N ATOM 389 C LYS 37 9.255 -1.286 -8.945 1.00 26.01 C ATOM 390 O LYS 37 9.917 -2.301 -8.682 1.00 29.88 O ATOM 391 N TYR 38 8.263 -0.832 -8.164 1.00 24.65 N ATOM 393 CA TYR 38 7.807 -1.515 -6.939 1.00 24.22 C ATOM 394 CB TYR 38 8.300 -0.780 -5.661 1.00 20.60 C ATOM 395 CG TYR 38 8.629 -1.655 -4.440 1.00 22.30 C ATOM 396 CD1 TYR 38 9.948 -2.123 -4.212 1.00 26.28 C ATOM 397 CE1 TYR 38 10.264 -2.909 -3.069 1.00 28.86 C ATOM 398 CD2 TYR 38 7.633 -1.995 -3.491 1.00 20.84 C ATOM 399 CE2 TYR 38 7.942 -2.781 -2.346 1.00 22.30 C ATOM 400 CZ TYR 38 9.257 -3.231 -2.146 1.00 26.28 C ATOM 401 OH TYR 38 9.562 -3.993 -1.040 1.00 30.02 O ATOM 403 C TYR 38 6.279 -1.648 -6.913 1.00 24.55 C ATOM 404 O TYR 38 5.570 -0.743 -7.368 1.00 24.55 O ATOM 405 N THR 39 5.796 -2.781 -6.388 1.00 25.14 N ATOM 407 CA THR 39 4.362 -3.099 -6.246 1.00 24.65 C ATOM 408 CB THR 39 3.956 -4.454 -6.967 1.00 29.06 C ATOM 409 OG1 THR 39 2.627 -4.842 -6.589 1.00 27.84 O ATOM 411 CG2 THR 39 4.949 -5.598 -6.680 1.00 30.90 C ATOM 412 C THR 39 3.940 -3.079 -4.761 1.00 19.95 C ATOM 413 O THR 39 4.741 -3.427 -3.885 1.00 19.14 O ATOM 414 N LEU 40 2.696 -2.649 -4.505 1.00 18.97 N ATOM 416 CA LEU 40 2.106 -2.549 -3.157 1.00 16.54 C ATOM 417 CB LEU 40 1.392 -1.181 -3.004 1.00 17.26 C ATOM 418 CG LEU 40 0.728 -0.543 -1.757 1.00 19.28 C ATOM 419 CD1 LEU 40 0.767 0.967 -1.895 1.00 21.58 C ATOM 420 CD2 LEU 40 -0.719 -1.009 -1.543 1.00 22.42 C ATOM 421 C LEU 40 1.098 -3.706 -3.021 1.00 17.50 C ATOM 422 O LEU 40 0.923 -4.249 -1.927 1.00 18.05 O ATOM 423 N CYS 41 0.454 -4.066 -4.140 1.00 19.46 N ATOM 425 CA CYS 41 -0.539 -5.150 -4.211 1.00 21.66 C ATOM 426 CB CYS 41 -1.954 -4.603 -3.981 1.00 22.91 C ATOM 427 SG CYS 41 -2.248 -3.958 -2.320 1.00 24.60 S ATOM 428 C CYS 41 -0.465 -5.858 -5.562 1.00 24.70 C ATOM 429 O CYS 41 -0.754 -7.074 -5.611 1.00 28.73 O ATOM 430 OXT CYS 41 -0.103 -5.191 -6.555 1.00 27.01 O TER END