####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 334), selected 41 , name T0955TS401_2 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS401_2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 16 - 38 4.99 18.59 LCS_AVERAGE: 53.06 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 1 - 16 1.86 18.04 LCS_AVERAGE: 25.70 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 5 - 14 0.80 19.42 LCS_AVERAGE: 14.87 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 16 20 3 3 4 4 9 15 17 19 19 21 22 22 23 24 25 26 26 26 27 28 LCS_GDT Q 2 Q 2 4 16 20 4 10 11 14 15 16 17 19 19 21 22 22 23 24 25 26 26 26 27 28 LCS_GDT E 3 E 3 4 16 20 4 7 10 14 15 16 17 19 19 21 22 22 23 24 25 26 26 26 27 28 LCS_GDT T 4 T 4 4 16 20 4 7 10 14 15 16 17 19 19 21 22 22 23 24 25 26 26 26 27 28 LCS_GDT R 5 R 5 10 16 20 4 7 11 14 15 16 17 19 19 21 22 22 23 24 25 26 26 26 27 28 LCS_GDT K 6 K 6 10 16 20 4 10 11 14 15 16 17 19 19 21 22 22 23 24 25 26 26 26 27 28 LCS_GDT K 7 K 7 10 16 20 4 10 11 13 15 16 17 19 19 21 22 22 23 24 25 26 26 26 27 28 LCS_GDT C 8 C 8 10 16 20 4 10 11 12 15 16 17 19 19 21 22 22 23 24 25 26 26 26 27 28 LCS_GDT T 9 T 9 10 16 20 6 10 11 14 15 16 17 19 19 21 22 22 23 24 25 26 26 26 27 28 LCS_GDT E 10 E 10 10 16 20 6 10 11 14 15 16 17 19 19 21 22 22 23 24 25 26 26 26 27 28 LCS_GDT M 11 M 11 10 16 20 6 10 11 14 15 16 17 19 19 21 22 22 23 24 25 26 26 26 27 28 LCS_GDT K 12 K 12 10 16 20 6 10 11 14 15 16 17 19 19 21 22 22 23 24 25 26 26 26 27 29 LCS_GDT K 13 K 13 10 16 20 6 10 11 14 15 16 17 19 19 21 22 22 23 24 25 26 26 26 27 29 LCS_GDT K 14 K 14 10 16 20 6 10 11 14 15 16 17 19 19 21 22 22 23 24 25 26 26 26 27 29 LCS_GDT F 15 F 15 9 16 22 4 7 10 14 15 16 17 19 19 21 22 22 23 24 25 26 26 26 27 29 LCS_GDT K 16 K 16 8 16 23 4 7 10 14 15 16 17 19 19 21 22 22 23 24 25 26 26 26 27 29 LCS_GDT N 17 N 17 5 9 23 4 4 5 6 7 10 13 16 19 20 22 22 23 24 25 26 26 26 27 29 LCS_GDT C 18 C 18 5 7 23 4 4 5 6 7 10 11 12 16 17 20 20 23 24 25 26 26 26 27 29 LCS_GDT E 19 E 19 5 7 23 3 4 5 7 9 10 11 14 16 18 20 20 23 24 25 26 26 26 27 29 LCS_GDT V 20 V 20 4 7 23 3 4 5 7 9 10 12 14 16 18 19 20 21 22 23 25 26 26 27 29 LCS_GDT R 21 R 21 4 7 23 3 4 5 7 9 10 12 14 16 18 19 20 21 22 22 25 26 26 27 29 LCS_GDT C 22 C 22 4 7 23 2 4 5 7 9 10 12 14 16 18 19 20 21 22 22 25 26 26 27 29 LCS_GDT D 23 D 23 3 7 23 3 3 5 7 9 10 12 14 16 18 19 20 21 22 22 25 26 26 27 29 LCS_GDT E 24 E 24 3 7 23 3 3 5 7 9 10 10 13 16 18 19 20 21 22 22 25 26 26 27 29 LCS_GDT S 25 S 25 4 7 23 3 3 5 6 9 10 12 14 16 18 19 20 21 22 22 25 26 26 27 29 LCS_GDT N 26 N 26 4 6 23 3 3 5 6 7 10 12 14 16 18 19 20 21 22 22 25 26 26 27 29 LCS_GDT H 27 H 27 4 8 23 3 4 4 5 7 10 12 14 16 18 19 20 21 22 22 25 26 26 27 29 LCS_GDT C 28 C 28 6 8 23 3 5 6 7 7 10 12 14 16 18 19 20 21 22 22 25 26 26 27 29 LCS_GDT V 29 V 29 6 8 23 3 5 6 7 7 10 11 12 15 18 18 20 21 22 22 25 26 26 27 29 LCS_GDT E 30 E 30 6 8 23 3 5 6 7 7 10 11 13 16 18 19 20 21 22 22 25 26 26 27 29 LCS_GDT V 31 V 31 6 8 23 3 5 6 7 7 10 12 14 16 18 19 20 21 22 22 25 26 26 27 29 LCS_GDT R 32 R 32 6 8 23 3 5 6 7 7 10 12 14 16 18 19 20 23 24 25 26 26 26 27 29 LCS_GDT C 33 C 33 6 8 23 3 5 9 9 10 16 17 18 19 21 22 22 23 24 25 26 26 26 27 29 LCS_GDT S 34 S 34 4 8 23 4 7 10 14 15 16 17 19 19 21 22 22 23 24 25 26 26 26 27 29 LCS_GDT D 35 D 35 4 5 23 4 4 4 4 7 10 12 14 18 21 22 22 22 23 25 26 26 26 27 29 LCS_GDT T 36 T 36 4 6 23 4 4 4 8 12 14 16 19 19 21 22 22 22 23 25 26 26 26 27 29 LCS_GDT K 37 K 37 5 6 23 4 5 5 5 5 6 8 19 19 21 22 22 23 24 25 26 26 26 27 29 LCS_GDT Y 38 Y 38 5 6 23 4 5 5 5 5 6 6 6 8 10 15 20 23 24 25 26 26 26 27 29 LCS_GDT T 39 T 39 5 6 22 4 5 5 5 5 6 6 7 11 12 13 14 20 21 23 25 26 26 27 29 LCS_GDT L 40 L 40 5 6 22 4 5 5 5 5 6 6 6 8 10 16 18 20 21 22 25 26 26 27 29 LCS_GDT C 41 C 41 5 6 17 3 5 5 6 7 8 8 8 9 10 12 13 16 18 20 23 23 23 26 27 LCS_AVERAGE LCS_A: 31.21 ( 14.87 25.70 53.06 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 10 11 14 15 16 17 19 19 21 22 22 23 24 25 26 26 26 27 29 GDT PERCENT_AT 14.63 24.39 26.83 34.15 36.59 39.02 41.46 46.34 46.34 51.22 53.66 53.66 56.10 58.54 60.98 63.41 63.41 63.41 65.85 70.73 GDT RMS_LOCAL 0.26 0.65 0.79 1.42 1.48 1.58 1.76 2.35 2.25 2.65 2.91 2.91 3.88 4.18 4.07 4.40 4.40 4.40 4.86 6.61 GDT RMS_ALL_AT 18.21 19.43 19.39 17.85 17.91 17.93 17.66 18.14 17.72 17.99 17.93 17.93 16.93 16.66 17.30 17.04 17.04 17.04 16.79 16.80 # Checking swapping # possible swapping detected: E 19 E 19 # possible swapping detected: D 23 D 23 # possible swapping detected: E 24 E 24 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 3.933 0 0.509 0.614 5.040 11.364 9.394 5.040 LGA Q 2 Q 2 1.986 0 0.031 1.226 4.342 48.636 31.717 4.342 LGA E 3 E 3 0.877 0 0.127 1.420 5.515 86.364 52.727 4.763 LGA T 4 T 4 0.816 0 0.159 1.129 2.683 77.727 63.896 2.683 LGA R 5 R 5 0.781 0 0.618 1.276 9.183 60.000 34.380 8.564 LGA K 6 K 6 1.317 0 0.049 0.865 7.485 58.182 31.313 7.485 LGA K 7 K 7 2.703 0 0.124 0.705 8.227 33.182 15.960 8.227 LGA C 8 C 8 3.379 0 0.104 0.768 7.683 25.000 17.576 7.683 LGA T 9 T 9 2.169 0 0.089 0.925 5.370 48.182 38.701 1.818 LGA E 10 E 10 0.793 0 0.010 0.902 7.158 86.364 47.071 7.158 LGA M 11 M 11 1.504 0 0.025 0.108 3.789 61.818 40.227 3.418 LGA K 12 K 12 2.035 0 0.118 0.692 7.523 44.545 25.455 7.523 LGA K 13 K 13 2.286 0 0.035 0.575 5.491 44.545 23.434 4.917 LGA K 14 K 14 1.979 0 0.050 1.025 3.931 45.455 36.162 3.931 LGA F 15 F 15 2.305 0 0.459 0.587 4.442 33.182 27.769 3.002 LGA K 16 K 16 0.614 0 0.114 0.939 8.539 54.545 29.091 8.539 LGA N 17 N 17 7.014 0 0.038 0.641 9.878 0.455 0.227 9.703 LGA C 18 C 18 10.114 0 0.669 0.646 10.856 0.000 0.000 10.834 LGA E 19 E 19 10.927 0 0.382 1.217 16.501 0.000 0.000 15.243 LGA V 20 V 20 14.029 0 0.357 0.291 17.413 0.000 0.000 14.811 LGA R 21 R 21 21.094 0 0.297 0.933 29.815 0.000 0.000 27.460 LGA C 22 C 22 25.773 0 0.533 0.869 29.732 0.000 0.000 24.755 LGA D 23 D 23 32.612 0 0.608 0.762 35.285 0.000 0.000 31.664 LGA E 24 E 24 37.693 0 0.418 0.568 40.803 0.000 0.000 38.383 LGA S 25 S 25 43.178 0 0.527 0.467 45.187 0.000 0.000 45.187 LGA N 26 N 26 39.831 0 0.655 1.275 41.618 0.000 0.000 34.236 LGA H 27 H 27 40.355 0 0.079 0.154 46.753 0.000 0.000 46.259 LGA C 28 C 28 35.166 0 0.183 0.823 37.119 0.000 0.000 36.724 LGA V 29 V 29 28.455 0 0.083 0.193 30.734 0.000 0.000 25.611 LGA E 30 E 30 22.920 0 0.442 1.125 25.112 0.000 0.000 24.096 LGA V 31 V 31 16.633 0 0.324 0.304 19.082 0.000 0.000 13.873 LGA R 32 R 32 11.553 0 0.162 1.371 18.551 0.000 0.000 18.168 LGA C 33 C 33 4.609 0 0.541 1.002 7.057 9.545 10.303 3.493 LGA S 34 S 34 2.065 0 0.534 0.509 3.269 27.727 37.879 1.718 LGA D 35 D 35 5.125 0 0.071 0.944 8.275 6.818 3.409 8.275 LGA T 36 T 36 4.033 0 0.052 0.178 8.436 15.455 8.831 8.295 LGA K 37 K 37 3.959 0 0.636 1.588 6.368 12.273 6.465 6.368 LGA Y 38 Y 38 9.284 0 0.040 1.198 16.350 0.000 0.000 16.350 LGA T 39 T 39 14.107 0 0.039 0.095 17.475 0.000 0.000 12.592 LGA L 40 L 40 19.748 0 0.581 0.936 23.302 0.000 0.000 18.466 LGA C 41 C 41 23.215 1 0.099 0.733 24.885 0.000 0.000 24.114 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 334 99.70 41 41 SUMMARY(RMSD_GDC): 13.062 12.886 13.904 21.741 14.439 4.967 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 19 2.35 42.073 38.228 0.776 LGA_LOCAL RMSD: 2.347 Number of atoms: 19 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 18.138 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 13.062 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.714590 * X + -0.431193 * Y + -0.550848 * Z + 16.903542 Y_new = -0.080908 * X + -0.731211 * Y + 0.677336 * Z + -15.398859 Z_new = -0.694849 * X + 0.528585 * Y + 0.487630 * Z + 49.472439 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -3.028850 0.768210 0.825679 [DEG: -173.5403 44.0152 47.3079 ] ZXZ: -2.458820 1.061424 -0.920470 [DEG: -140.8800 60.8151 -52.7390 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS401_2 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS401_2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 19 2.35 38.228 13.06 REMARK ---------------------------------------------------------- MOLECULE T0955TS401_2 PFRMAT TS TARGET T0955 MODEL 2 REFINED PARENT N/A ATOM 1 N SER 1 -2.838 -12.557 -0.346 1.00 5.80 ATOM 2 CA SER 1 -2.704 -12.684 1.133 1.00 5.80 ATOM 3 C SER 1 -1.346 -12.195 1.662 1.00 5.80 ATOM 4 O SER 1 -1.273 -11.089 2.193 1.00 5.80 ATOM 5 CB SER 1 -3.035 -14.107 1.621 1.00 6.10 ATOM 6 OG SER 1 -4.328 -14.500 1.177 1.00 6.10 ATOM 7 N GLN 2 -0.258 -12.972 1.525 1.00 4.80 ATOM 8 CA GLN 2 1.052 -12.702 2.167 1.00 4.80 ATOM 9 C GLN 2 2.009 -11.801 1.343 1.00 4.80 ATOM 10 O GLN 2 3.144 -11.560 1.760 1.00 4.80 ATOM 11 CB GLN 2 1.715 -14.048 2.533 1.00 6.00 ATOM 12 CG GLN 2 0.906 -14.921 3.519 1.00 6.00 ATOM 13 CD GLN 2 0.830 -14.381 4.951 1.00 6.00 ATOM 14 OE1 GLN 2 1.550 -13.482 5.369 1.00 6.00 ATOM 15 NE2 GLN 2 -0.032 -14.929 5.783 1.00 6.00 ATOM 16 N GLU 3 1.574 -11.310 0.175 1.00 4.70 ATOM 17 CA GLU 3 2.362 -10.456 -0.738 1.00 4.70 ATOM 18 C GLU 3 1.717 -9.074 -0.958 1.00 4.70 ATOM 19 O GLU 3 2.345 -8.047 -0.709 1.00 4.70 ATOM 20 CB GLU 3 2.557 -11.183 -2.081 1.00 6.20 ATOM 21 CG GLU 3 3.415 -12.456 -1.988 1.00 6.20 ATOM 22 CD GLU 3 4.883 -12.184 -1.602 1.00 6.20 ATOM 23 OE1 GLU 3 5.477 -11.179 -2.062 1.00 6.20 ATOM 24 OE2 GLU 3 5.477 -12.991 -0.845 1.00 6.20 ATOM 25 N THR 4 0.439 -9.043 -1.366 1.00 4.30 ATOM 26 CA THR 4 -0.376 -7.819 -1.564 1.00 4.30 ATOM 27 C THR 4 -0.683 -7.061 -0.264 1.00 4.30 ATOM 28 O THR 4 -1.096 -5.900 -0.299 1.00 4.30 ATOM 29 CB THR 4 -1.701 -8.182 -2.260 1.00 5.00 ATOM 30 OG1 THR 4 -2.340 -9.259 -1.590 1.00 5.00 ATOM 31 CG2 THR 4 -1.484 -8.606 -3.713 1.00 5.00 ATOM 32 N ARG 5 -0.469 -7.705 0.889 1.00 3.10 ATOM 33 CA ARG 5 -0.501 -7.145 2.253 1.00 3.10 ATOM 34 C ARG 5 0.704 -7.677 3.044 1.00 3.10 ATOM 35 O ARG 5 1.436 -8.538 2.555 1.00 3.10 ATOM 36 CB ARG 5 -1.846 -7.493 2.933 1.00 5.30 ATOM 37 CG ARG 5 -3.096 -6.905 2.254 1.00 5.30 ATOM 38 CD ARG 5 -3.136 -5.371 2.302 1.00 5.30 ATOM 39 NE ARG 5 -4.362 -4.838 1.678 1.00 5.30 ATOM 40 CZ ARG 5 -4.509 -4.380 0.445 1.00 5.30 ATOM 41 NH1 ARG 5 -5.646 -3.866 0.074 1.00 5.30 ATOM 42 NH2 ARG 5 -3.551 -4.414 -0.441 1.00 5.30 ATOM 43 N LYS 6 0.942 -7.135 4.243 1.00 3.10 ATOM 44 CA LYS 6 2.128 -7.336 5.108 1.00 3.10 ATOM 45 C LYS 6 3.429 -6.749 4.532 1.00 3.10 ATOM 46 O LYS 6 4.079 -5.944 5.198 1.00 3.10 ATOM 47 CB LYS 6 2.236 -8.818 5.525 1.00 5.30 ATOM 48 CG LYS 6 3.031 -9.006 6.826 1.00 5.30 ATOM 49 CD LYS 6 3.056 -10.475 7.277 1.00 5.30 ATOM 50 CE LYS 6 4.008 -11.329 6.427 1.00 5.30 ATOM 51 NZ LYS 6 3.914 -12.768 6.788 1.00 5.30 ATOM 52 N LYS 7 3.781 -7.092 3.285 1.00 3.40 ATOM 53 CA LYS 7 4.933 -6.540 2.541 1.00 3.40 ATOM 54 C LYS 7 4.623 -5.182 1.898 1.00 3.40 ATOM 55 O LYS 7 5.304 -4.202 2.189 1.00 3.40 ATOM 56 CB LYS 7 5.433 -7.563 1.506 1.00 5.40 ATOM 57 CG LYS 7 6.016 -8.817 2.178 1.00 5.40 ATOM 58 CD LYS 7 6.504 -9.817 1.123 1.00 5.40 ATOM 59 CE LYS 7 7.076 -11.074 1.791 1.00 5.40 ATOM 60 NZ LYS 7 7.548 -12.055 0.780 1.00 5.40 ATOM 61 N CYS 8 3.565 -5.082 1.086 1.00 3.00 ATOM 62 CA CYS 8 3.166 -3.808 0.458 1.00 3.00 ATOM 63 C CYS 8 2.648 -2.762 1.467 1.00 3.00 ATOM 64 O CYS 8 2.826 -1.563 1.257 1.00 3.00 ATOM 65 CB CYS 8 2.129 -4.075 -0.642 1.00 3.70 ATOM 66 SG CYS 8 2.913 -4.967 -2.019 1.00 3.70 ATOM 67 N THR 9 2.058 -3.188 2.590 1.00 2.70 ATOM 68 CA THR 9 1.613 -2.282 3.671 1.00 2.70 ATOM 69 C THR 9 2.775 -1.671 4.461 1.00 2.70 ATOM 70 O THR 9 2.628 -0.570 4.987 1.00 2.70 ATOM 71 CB THR 9 0.628 -2.988 4.614 1.00 3.40 ATOM 72 OG1 THR 9 1.111 -4.263 4.977 1.00 3.40 ATOM 73 CG2 THR 9 -0.723 -3.203 3.938 1.00 3.40 ATOM 74 N GLU 10 3.960 -2.291 4.476 1.00 3.00 ATOM 75 CA GLU 10 5.175 -1.667 5.028 1.00 3.00 ATOM 76 C GLU 10 5.565 -0.409 4.235 1.00 3.00 ATOM 77 O GLU 10 5.921 0.610 4.825 1.00 3.00 ATOM 78 CB GLU 10 6.327 -2.689 5.044 1.00 4.70 ATOM 79 CG GLU 10 7.629 -2.186 5.691 1.00 4.70 ATOM 80 CD GLU 10 7.500 -1.796 7.180 1.00 4.70 ATOM 81 OE1 GLU 10 6.606 -2.312 7.894 1.00 4.70 ATOM 82 OE2 GLU 10 8.331 -0.988 7.661 1.00 4.70 ATOM 83 N MET 11 5.417 -0.440 2.904 1.00 3.20 ATOM 84 CA MET 11 5.652 0.722 2.033 1.00 3.20 ATOM 85 C MET 11 4.635 1.853 2.270 1.00 3.20 ATOM 86 O MET 11 4.990 3.020 2.108 1.00 3.20 ATOM 87 CB MET 11 5.673 0.303 0.553 1.00 4.70 ATOM 88 CG MET 11 6.715 -0.774 0.206 1.00 4.70 ATOM 89 SD MET 11 8.461 -0.275 0.338 1.00 4.70 ATOM 90 CE MET 11 8.855 -0.765 2.042 1.00 4.70 ATOM 91 N LYS 12 3.403 1.545 2.713 1.00 3.20 ATOM 92 CA LYS 12 2.441 2.563 3.186 1.00 3.20 ATOM 93 C LYS 12 2.871 3.150 4.535 1.00 3.20 ATOM 94 O LYS 12 3.016 4.367 4.665 1.00 3.20 ATOM 95 CB LYS 12 1.008 2.000 3.274 1.00 5.10 ATOM 96 CG LYS 12 0.441 1.546 1.920 1.00 5.10 ATOM 97 CD LYS 12 -1.062 1.247 2.049 1.00 5.10 ATOM 98 CE LYS 12 -1.647 0.775 0.710 1.00 5.10 ATOM 99 NZ LYS 12 -3.129 0.637 0.781 1.00 5.10 ATOM 100 N LYS 13 3.133 2.288 5.528 1.00 3.30 ATOM 101 CA LYS 13 3.515 2.675 6.904 1.00 3.30 ATOM 102 C LYS 13 4.794 3.517 6.957 1.00 3.30 ATOM 103 O LYS 13 4.840 4.492 7.705 1.00 3.30 ATOM 104 CB LYS 13 3.659 1.419 7.781 1.00 5.00 ATOM 105 CG LYS 13 2.298 0.806 8.145 1.00 5.00 ATOM 106 CD LYS 13 2.484 -0.436 9.029 1.00 5.00 ATOM 107 CE LYS 13 1.124 -1.005 9.457 1.00 5.00 ATOM 108 NZ LYS 13 1.281 -2.188 10.349 1.00 5.00 ATOM 109 N LYS 14 5.789 3.203 6.118 1.00 3.40 ATOM 110 CA LYS 14 7.078 3.917 6.013 1.00 3.40 ATOM 111 C LYS 14 6.916 5.434 5.832 1.00 3.40 ATOM 112 O LYS 14 7.624 6.199 6.484 1.00 3.40 ATOM 113 CB LYS 14 7.889 3.275 4.871 1.00 5.20 ATOM 114 CG LYS 14 9.231 3.971 4.597 1.00 5.20 ATOM 115 CD LYS 14 10.051 3.196 3.558 1.00 5.20 ATOM 116 CE LYS 14 11.308 3.994 3.182 1.00 5.20 ATOM 117 NZ LYS 14 12.144 3.270 2.184 1.00 5.20 ATOM 118 N PHE 15 5.968 5.871 4.996 1.00 3.70 ATOM 119 CA PHE 15 5.658 7.295 4.796 1.00 3.70 ATOM 120 C PHE 15 4.546 7.805 5.728 1.00 3.70 ATOM 121 O PHE 15 4.663 8.913 6.257 1.00 3.70 ATOM 122 CB PHE 15 5.352 7.549 3.314 1.00 5.70 ATOM 123 CG PHE 15 6.534 7.235 2.411 1.00 5.70 ATOM 124 CD1 PHE 15 6.579 6.026 1.693 1.00 5.70 ATOM 125 CD2 PHE 15 7.618 8.130 2.330 1.00 5.70 ATOM 126 CE1 PHE 15 7.704 5.702 0.913 1.00 5.70 ATOM 127 CE2 PHE 15 8.741 7.812 1.544 1.00 5.70 ATOM 128 CZ PHE 15 8.788 6.595 0.839 1.00 5.70 ATOM 129 N LYS 16 3.505 7.000 6.000 1.00 3.80 ATOM 130 CA LYS 16 2.380 7.385 6.879 1.00 3.80 ATOM 131 C LYS 16 2.826 7.718 8.311 1.00 3.80 ATOM 132 O LYS 16 2.331 8.682 8.892 1.00 3.80 ATOM 133 CB LYS 16 1.312 6.275 6.865 1.00 5.80 ATOM 134 CG LYS 16 0.037 6.689 7.621 1.00 5.80 ATOM 135 CD LYS 16 -1.053 5.612 7.556 1.00 5.80 ATOM 136 CE LYS 16 -2.290 6.092 8.332 1.00 5.80 ATOM 137 NZ LYS 16 -3.394 5.095 8.295 1.00 5.80 ATOM 138 N ASN 17 3.780 6.964 8.865 1.00 3.70 ATOM 139 CA ASN 17 4.283 7.167 10.231 1.00 3.70 ATOM 140 C ASN 17 5.149 8.438 10.370 1.00 3.70 ATOM 141 O ASN 17 5.117 9.092 11.416 1.00 3.70 ATOM 142 CB ASN 17 5.059 5.912 10.678 1.00 4.60 ATOM 143 CG ASN 17 4.207 4.657 10.832 1.00 4.60 ATOM 144 OD1 ASN 17 2.990 4.647 10.698 1.00 4.60 ATOM 145 ND2 ASN 17 4.828 3.543 11.154 1.00 4.60 ATOM 146 N CYS 18 5.905 8.803 9.327 1.00 4.30 ATOM 147 CA CYS 18 6.726 10.021 9.296 1.00 4.30 ATOM 148 C CYS 18 5.913 11.300 9.001 1.00 4.30 ATOM 149 O CYS 18 6.338 12.395 9.374 1.00 4.30 ATOM 150 CB CYS 18 7.836 9.839 8.248 1.00 4.80 ATOM 151 SG CYS 18 8.944 8.484 8.743 1.00 4.80 ATOM 152 N GLU 19 4.776 11.175 8.302 1.00 4.70 ATOM 153 CA GLU 19 3.899 12.276 7.844 1.00 4.70 ATOM 154 C GLU 19 4.598 13.317 6.933 1.00 4.70 ATOM 155 O GLU 19 4.055 14.392 6.665 1.00 4.70 ATOM 156 CB GLU 19 3.146 12.924 9.028 1.00 6.00 ATOM 157 CG GLU 19 2.316 11.918 9.844 1.00 6.00 ATOM 158 CD GLU 19 1.542 12.567 11.013 1.00 6.00 ATOM 159 OE1 GLU 19 1.179 13.768 10.948 1.00 6.00 ATOM 160 OE2 GLU 19 1.265 11.864 12.016 1.00 6.00 ATOM 161 N VAL 20 5.808 12.997 6.449 1.00 3.70 ATOM 162 CA VAL 20 6.690 13.848 5.623 1.00 3.70 ATOM 163 C VAL 20 6.882 15.257 6.228 1.00 3.70 ATOM 164 O VAL 20 6.826 16.278 5.541 1.00 3.70 ATOM 165 CB VAL 20 6.296 13.818 4.123 1.00 4.00 ATOM 166 CG1 VAL 20 7.444 14.284 3.210 1.00 4.00 ATOM 167 CG2 VAL 20 5.948 12.391 3.663 1.00 4.00 ATOM 168 N ARG 21 7.118 15.317 7.551 1.00 3.50 ATOM 169 CA ARG 21 7.511 16.532 8.299 1.00 3.50 ATOM 170 C ARG 21 8.977 16.903 8.020 1.00 3.50 ATOM 171 O ARG 21 9.847 16.819 8.886 1.00 3.50 ATOM 172 CB ARG 21 7.214 16.351 9.804 1.00 5.50 ATOM 173 CG ARG 21 5.716 16.348 10.162 1.00 5.50 ATOM 174 CD ARG 21 4.984 17.673 9.882 1.00 5.50 ATOM 175 NE ARG 21 5.580 18.814 10.612 1.00 5.50 ATOM 176 CZ ARG 21 5.044 19.560 11.561 1.00 5.50 ATOM 177 NH1 ARG 21 5.742 20.548 12.032 1.00 5.50 ATOM 178 NH2 ARG 21 3.851 19.359 12.050 1.00 5.50 ATOM 179 N CYS 22 9.245 17.302 6.778 1.00 3.60 ATOM 180 CA CYS 22 10.549 17.667 6.210 1.00 3.60 ATOM 181 C CYS 22 11.107 19.027 6.709 1.00 3.60 ATOM 182 O CYS 22 11.724 19.772 5.947 1.00 3.60 ATOM 183 CB CYS 22 10.401 17.618 4.679 1.00 4.00 ATOM 184 SG CYS 22 9.138 18.814 4.138 1.00 4.00 ATOM 185 N ASP 23 10.899 19.370 7.985 1.00 4.60 ATOM 186 CA ASP 23 11.194 20.679 8.606 1.00 4.60 ATOM 187 C ASP 23 12.702 20.933 8.874 1.00 4.60 ATOM 188 O ASP 23 13.102 21.524 9.880 1.00 4.60 ATOM 189 CB ASP 23 10.313 20.860 9.857 1.00 5.30 ATOM 190 CG ASP 23 8.800 20.725 9.593 1.00 5.30 ATOM 191 OD1 ASP 23 8.321 21.046 8.478 1.00 5.30 ATOM 192 OD2 ASP 23 8.066 20.317 10.525 1.00 5.30 ATOM 193 N GLU 24 13.554 20.461 7.965 1.00 5.50 ATOM 194 CA GLU 24 15.020 20.467 8.006 1.00 5.50 ATOM 195 C GLU 24 15.601 21.764 7.391 1.00 5.50 ATOM 196 O GLU 24 16.391 21.727 6.442 1.00 5.50 ATOM 197 CB GLU 24 15.539 19.184 7.324 1.00 6.30 ATOM 198 CG GLU 24 15.020 17.899 7.999 1.00 6.30 ATOM 199 CD GLU 24 15.601 16.608 7.388 1.00 6.30 ATOM 200 OE1 GLU 24 15.931 16.569 6.176 1.00 6.30 ATOM 201 OE2 GLU 24 15.710 15.592 8.120 1.00 6.30 ATOM 202 N SER 25 15.179 22.921 7.922 1.00 6.40 ATOM 203 CA SER 25 15.570 24.280 7.490 1.00 6.40 ATOM 204 C SER 25 15.232 24.585 6.016 1.00 6.40 ATOM 205 O SER 25 16.104 24.639 5.144 1.00 6.40 ATOM 206 CB SER 25 17.042 24.574 7.830 1.00 6.90 ATOM 207 OG SER 25 17.276 24.432 9.228 1.00 6.90 ATOM 208 N ASN 26 13.936 24.779 5.739 1.00 6.20 ATOM 209 CA ASN 26 13.390 25.060 4.403 1.00 6.20 ATOM 210 C ASN 26 13.796 26.435 3.822 1.00 6.20 ATOM 211 O ASN 26 14.119 27.377 4.552 1.00 6.20 ATOM 212 CB ASN 26 11.851 24.949 4.451 1.00 6.80 ATOM 213 CG ASN 26 11.357 23.563 4.830 1.00 6.80 ATOM 214 OD1 ASN 26 11.638 22.579 4.160 1.00 6.80 ATOM 215 ND2 ASN 26 10.597 23.440 5.896 1.00 6.80 ATOM 216 N HIS 27 13.677 26.557 2.491 1.00 5.90 ATOM 217 CA HIS 27 13.864 27.787 1.695 1.00 5.90 ATOM 218 C HIS 27 12.691 27.998 0.711 1.00 5.90 ATOM 219 O HIS 27 12.895 28.291 -0.470 1.00 5.90 ATOM 220 CB HIS 27 15.242 27.757 1.004 1.00 7.00 ATOM 221 CG HIS 27 16.416 27.791 1.955 1.00 7.00 ATOM 222 ND1 HIS 27 16.983 28.948 2.503 1.00 7.00 ATOM 223 CD2 HIS 27 17.099 26.704 2.419 1.00 7.00 ATOM 224 CE1 HIS 27 17.996 28.529 3.282 1.00 7.00 ATOM 225 NE2 HIS 27 18.086 27.187 3.252 1.00 7.00 ATOM 226 N CYS 28 11.459 27.806 1.205 1.00 5.90 ATOM 227 CA CYS 28 10.191 27.769 0.454 1.00 5.90 ATOM 228 C CYS 28 10.148 26.649 -0.616 1.00 5.90 ATOM 229 O CYS 28 10.552 26.839 -1.768 1.00 5.90 ATOM 230 CB CYS 28 9.862 29.173 -0.084 1.00 6.50 ATOM 231 SG CYS 28 8.172 29.201 -0.758 1.00 6.50 ATOM 232 N VAL 29 9.654 25.465 -0.220 1.00 5.40 ATOM 233 CA VAL 29 9.572 24.248 -1.059 1.00 5.40 ATOM 234 C VAL 29 8.207 23.562 -0.875 1.00 5.40 ATOM 235 O VAL 29 7.734 23.391 0.249 1.00 5.40 ATOM 236 CB VAL 29 10.733 23.269 -0.763 1.00 5.40 ATOM 237 CG1 VAL 29 10.814 22.167 -1.827 1.00 5.40 ATOM 238 CG2 VAL 29 12.109 23.950 -0.712 1.00 5.40 ATOM 239 N GLU 30 7.561 23.167 -1.975 1.00 5.40 ATOM 240 CA GLU 30 6.161 22.696 -2.021 1.00 5.40 ATOM 241 C GLU 30 5.998 21.181 -1.747 1.00 5.40 ATOM 242 O GLU 30 5.395 20.444 -2.533 1.00 5.40 ATOM 243 CB GLU 30 5.514 23.139 -3.350 1.00 6.50 ATOM 244 CG GLU 30 5.565 24.664 -3.542 1.00 6.50 ATOM 245 CD GLU 30 4.633 25.145 -4.672 1.00 6.50 ATOM 246 OE1 GLU 30 4.664 24.578 -5.792 1.00 6.50 ATOM 247 OE2 GLU 30 3.869 26.119 -4.455 1.00 6.50 ATOM 248 N VAL 31 6.553 20.700 -0.626 1.00 4.90 ATOM 249 CA VAL 31 6.630 19.268 -0.261 1.00 4.90 ATOM 250 C VAL 31 5.280 18.719 0.248 1.00 4.90 ATOM 251 O VAL 31 5.088 18.470 1.442 1.00 4.90 ATOM 252 CB VAL 31 7.797 18.996 0.718 1.00 5.00 ATOM 253 CG1 VAL 31 8.035 17.491 0.934 1.00 5.00 ATOM 254 CG2 VAL 31 9.118 19.596 0.214 1.00 5.00 ATOM 255 N ARG 32 4.318 18.551 -0.666 1.00 5.20 ATOM 256 CA ARG 32 3.017 17.884 -0.449 1.00 5.20 ATOM 257 C ARG 32 3.056 16.441 -0.978 1.00 5.20 ATOM 258 O ARG 32 3.380 16.212 -2.144 1.00 5.20 ATOM 259 CB ARG 32 1.897 18.700 -1.127 1.00 6.90 ATOM 260 CG ARG 32 1.679 20.118 -0.564 1.00 6.90 ATOM 261 CD ARG 32 1.163 20.127 0.883 1.00 6.90 ATOM 262 NE ARG 32 0.915 21.503 1.363 1.00 6.90 ATOM 263 CZ ARG 32 -0.192 22.219 1.243 1.00 6.90 ATOM 264 NH1 ARG 32 -0.257 23.417 1.749 1.00 6.90 ATOM 265 NH2 ARG 32 -1.252 21.774 0.625 1.00 6.90 ATOM 266 N CYS 33 2.719 15.465 -0.131 1.00 4.80 ATOM 267 CA CYS 33 2.855 14.020 -0.400 1.00 4.80 ATOM 268 C CYS 33 1.649 13.418 -1.171 1.00 4.80 ATOM 269 O CYS 33 1.094 12.376 -0.809 1.00 4.80 ATOM 270 CB CYS 33 3.176 13.323 0.935 1.00 4.90 ATOM 271 SG CYS 33 3.821 11.646 0.648 1.00 4.90 ATOM 272 N SER 34 1.188 14.109 -2.219 1.00 5.60 ATOM 273 CA SER 34 -0.019 13.775 -3.001 1.00 5.60 ATOM 274 C SER 34 0.221 12.668 -4.049 1.00 5.60 ATOM 275 O SER 34 -0.078 12.848 -5.229 1.00 5.60 ATOM 276 CB SER 34 -0.595 15.047 -3.646 1.00 6.10 ATOM 277 OG SER 34 -0.832 16.050 -2.664 1.00 6.10 ATOM 278 N ASP 35 0.779 11.524 -3.637 1.00 6.60 ATOM 279 CA ASP 35 1.277 10.455 -4.529 1.00 6.60 ATOM 280 C ASP 35 0.228 9.819 -5.468 1.00 6.60 ATOM 281 O ASP 35 0.596 9.252 -6.501 1.00 6.60 ATOM 282 CB ASP 35 1.947 9.346 -3.697 1.00 7.00 ATOM 283 CG ASP 35 3.264 9.740 -3.002 1.00 7.00 ATOM 284 OD1 ASP 35 3.814 10.842 -3.246 1.00 7.00 ATOM 285 OD2 ASP 35 3.784 8.903 -2.225 1.00 7.00 ATOM 286 N THR 36 -1.070 9.909 -5.152 1.00 7.70 ATOM 287 CA THR 36 -2.158 9.512 -6.066 1.00 7.70 ATOM 288 C THR 36 -2.192 10.450 -7.280 1.00 7.70 ATOM 289 O THR 36 -2.553 11.621 -7.144 1.00 7.70 ATOM 290 CB THR 36 -3.518 9.512 -5.341 1.00 8.20 ATOM 291 OG1 THR 36 -3.491 8.563 -4.290 1.00 8.20 ATOM 292 CG2 THR 36 -4.688 9.141 -6.260 1.00 8.20 ATOM 293 N LYS 37 -1.828 9.931 -8.464 1.00 7.60 ATOM 294 CA LYS 37 -1.688 10.614 -9.776 1.00 7.60 ATOM 295 C LYS 37 -0.628 11.730 -9.859 1.00 7.60 ATOM 296 O LYS 37 0.114 11.785 -10.842 1.00 7.60 ATOM 297 CB LYS 37 -3.051 11.123 -10.285 1.00 8.60 ATOM 298 CG LYS 37 -4.106 10.017 -10.452 1.00 8.60 ATOM 299 CD LYS 37 -5.416 10.607 -10.991 1.00 8.60 ATOM 300 CE LYS 37 -6.461 9.504 -11.203 1.00 8.60 ATOM 301 NZ LYS 37 -7.723 10.052 -11.772 1.00 8.60 ATOM 302 N TYR 38 -0.561 12.620 -8.872 1.00 6.50 ATOM 303 CA TYR 38 0.295 13.815 -8.855 1.00 6.50 ATOM 304 C TYR 38 1.698 13.563 -8.265 1.00 6.50 ATOM 305 O TYR 38 1.921 12.611 -7.511 1.00 6.50 ATOM 306 CB TYR 38 -0.440 14.947 -8.115 1.00 7.30 ATOM 307 CG TYR 38 -1.725 15.386 -8.799 1.00 7.30 ATOM 308 CD1 TYR 38 -2.955 14.794 -8.452 1.00 7.30 ATOM 309 CD2 TYR 38 -1.681 16.364 -9.813 1.00 7.30 ATOM 310 CE1 TYR 38 -4.135 15.151 -9.135 1.00 7.30 ATOM 311 CE2 TYR 38 -2.860 16.735 -10.489 1.00 7.30 ATOM 312 CZ TYR 38 -4.089 16.122 -10.161 1.00 7.30 ATOM 313 OH TYR 38 -5.219 16.469 -10.838 1.00 7.30 ATOM 314 N THR 39 2.637 14.463 -8.588 1.00 6.50 ATOM 315 CA THR 39 4.007 14.514 -8.038 1.00 6.50 ATOM 316 C THR 39 4.427 15.980 -7.887 1.00 6.50 ATOM 317 O THR 39 4.796 16.631 -8.867 1.00 6.50 ATOM 318 CB THR 39 5.012 13.750 -8.932 1.00 7.00 ATOM 319 OG1 THR 39 4.656 12.384 -9.048 1.00 7.00 ATOM 320 CG2 THR 39 6.440 13.782 -8.371 1.00 7.00 ATOM 321 N LEU 40 4.337 16.519 -6.663 1.00 7.00 ATOM 322 CA LEU 40 4.668 17.923 -6.353 1.00 7.00 ATOM 323 C LEU 40 6.111 18.132 -5.836 1.00 7.00 ATOM 324 O LEU 40 6.547 19.279 -5.707 1.00 7.00 ATOM 325 CB LEU 40 3.590 18.507 -5.414 1.00 7.10 ATOM 326 CG LEU 40 2.166 18.518 -6.014 1.00 7.10 ATOM 327 CD1 LEU 40 1.168 19.094 -5.009 1.00 7.10 ATOM 328 CD2 LEU 40 2.067 19.352 -7.296 1.00 7.10 ATOM 329 N CYS 41 6.858 17.036 -5.618 1.00 8.80 ATOM 330 CA CYS 41 8.278 16.974 -5.230 1.00 8.80 ATOM 331 C CYS 41 8.606 17.741 -3.924 1.00 8.80 ATOM 332 O CYS 41 8.356 17.154 -2.844 1.00 8.80 ATOM 333 CB CYS 41 9.150 17.333 -6.446 1.00 9.20 ATOM 334 SG CYS 41 10.879 16.889 -6.109 1.00 9.20 TER END