####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS390_3 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS390_3.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 3.17 3.17 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 1 - 22 1.99 4.47 LCS_AVERAGE: 45.63 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 2 - 16 0.79 6.02 LCS_AVERAGE: 24.09 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 22 41 3 3 4 14 17 24 25 31 34 36 40 41 41 41 41 41 41 41 41 41 LCS_GDT Q 2 Q 2 15 22 41 8 14 15 19 21 24 27 32 34 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT E 3 E 3 15 22 41 9 14 15 19 21 24 29 32 34 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT T 4 T 4 15 22 41 10 14 15 19 21 26 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT R 5 R 5 15 22 41 10 14 15 19 23 27 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT K 6 K 6 15 22 41 10 14 15 19 21 26 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT K 7 K 7 15 22 41 10 14 15 19 22 27 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT C 8 C 8 15 22 41 8 14 17 22 27 29 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT T 9 T 9 15 22 41 10 14 15 22 26 29 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT E 10 E 10 15 22 41 10 14 15 22 26 29 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT M 11 M 11 15 22 41 10 14 17 22 27 29 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT K 12 K 12 15 22 41 10 14 17 22 27 29 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT K 13 K 13 15 22 41 10 14 15 22 27 29 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT K 14 K 14 15 22 41 10 14 17 22 27 29 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT F 15 F 15 15 22 41 5 14 15 21 25 29 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT K 16 K 16 15 22 41 4 7 9 15 19 24 29 32 34 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT N 17 N 17 8 22 41 6 11 16 22 27 29 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT C 18 C 18 8 22 41 6 13 17 22 27 29 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT E 19 E 19 8 22 41 6 13 17 22 27 29 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT V 20 V 20 8 22 41 5 13 17 22 27 29 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT R 21 R 21 8 22 41 6 13 17 22 27 29 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT C 22 C 22 8 22 41 6 11 17 22 27 29 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT D 23 D 23 8 21 41 6 11 16 22 27 29 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT E 24 E 24 8 17 41 3 11 17 22 27 29 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT S 25 S 25 4 10 41 3 4 11 18 22 27 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT N 26 N 26 4 10 41 3 4 8 9 9 22 27 32 34 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT H 27 H 27 8 15 41 7 13 17 22 27 29 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT C 28 C 28 8 15 41 7 13 17 22 27 29 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT V 29 V 29 8 15 41 7 13 17 22 27 29 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT E 30 E 30 8 15 41 7 13 17 22 27 29 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT V 31 V 31 8 15 41 7 13 17 22 27 29 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT R 32 R 32 8 15 41 7 13 17 22 27 29 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT C 33 C 33 8 15 41 7 13 17 22 27 29 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT S 34 S 34 8 15 41 5 13 17 22 27 29 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT D 35 D 35 7 15 41 3 5 16 22 27 29 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT T 36 T 36 7 15 41 3 5 17 22 27 29 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT K 37 K 37 7 15 41 3 5 16 22 27 29 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT Y 38 Y 38 5 15 41 0 4 9 20 27 29 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT T 39 T 39 5 15 41 3 4 7 17 27 29 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT L 40 L 40 5 15 41 3 4 7 12 27 29 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_GDT C 41 C 41 5 15 41 3 3 7 10 19 29 31 33 35 37 40 41 41 41 41 41 41 41 41 41 LCS_AVERAGE LCS_A: 56.57 ( 24.09 45.63 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 14 17 22 27 29 31 33 35 37 40 41 41 41 41 41 41 41 41 41 GDT PERCENT_AT 24.39 34.15 41.46 53.66 65.85 70.73 75.61 80.49 85.37 90.24 97.56 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.25 0.47 0.99 1.26 1.69 1.79 1.92 2.21 2.39 2.61 3.04 3.17 3.17 3.17 3.17 3.17 3.17 3.17 3.17 3.17 GDT RMS_ALL_AT 6.31 6.31 3.91 3.91 4.06 3.96 3.91 3.54 3.47 3.37 3.19 3.17 3.17 3.17 3.17 3.17 3.17 3.17 3.17 3.17 # Checking swapping # possible swapping detected: E 10 E 10 # possible swapping detected: E 30 E 30 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 9.067 0 0.617 0.612 10.572 0.000 0.000 10.572 LGA Q 2 Q 2 8.080 0 0.254 1.198 9.086 0.000 0.000 7.283 LGA E 3 E 3 7.702 0 0.088 1.139 8.930 0.000 0.000 8.740 LGA T 4 T 4 5.263 0 0.022 1.088 6.173 4.091 4.935 6.062 LGA R 5 R 5 3.758 0 0.036 0.235 7.664 11.364 4.793 6.752 LGA K 6 K 6 4.923 0 0.060 1.211 12.968 5.000 2.222 12.968 LGA K 7 K 7 4.154 0 0.047 0.663 9.560 14.091 6.465 9.560 LGA C 8 C 8 1.279 0 0.086 0.736 3.162 71.364 64.242 3.162 LGA T 9 T 9 1.942 0 0.040 0.121 3.638 50.909 35.844 3.444 LGA E 10 E 10 2.149 0 0.063 0.585 7.003 55.909 26.869 6.383 LGA M 11 M 11 1.349 0 0.088 1.016 5.718 61.818 40.909 5.718 LGA K 12 K 12 1.807 0 0.079 0.679 5.586 47.273 28.687 5.586 LGA K 13 K 13 2.104 0 0.039 0.582 5.338 44.545 27.273 4.176 LGA K 14 K 14 1.503 0 0.075 0.623 3.458 40.455 38.990 2.511 LGA F 15 F 15 3.252 0 0.175 0.397 4.560 14.545 17.355 4.065 LGA K 16 K 16 5.408 0 0.394 1.166 13.727 1.818 0.808 13.727 LGA N 17 N 17 2.782 0 0.354 0.567 5.496 32.727 26.818 5.496 LGA C 18 C 18 1.283 0 0.134 0.140 2.296 51.364 58.788 0.861 LGA E 19 E 19 1.562 0 0.306 1.181 6.650 61.818 36.162 6.650 LGA V 20 V 20 1.436 0 0.141 0.158 2.051 65.455 57.403 1.990 LGA R 21 R 21 1.308 0 0.052 1.409 7.778 65.455 35.537 7.282 LGA C 22 C 22 1.970 0 0.263 0.338 3.758 45.000 36.364 3.758 LGA D 23 D 23 2.091 0 0.486 0.874 4.572 29.545 35.455 2.263 LGA E 24 E 24 1.755 0 0.630 0.577 7.814 70.455 32.727 7.814 LGA S 25 S 25 4.062 0 0.303 0.335 5.350 8.636 6.364 4.729 LGA N 26 N 26 6.840 0 0.261 1.149 12.347 0.000 0.000 8.961 LGA H 27 H 27 1.079 0 0.414 1.147 6.919 71.364 37.273 6.919 LGA C 28 C 28 0.904 0 0.105 0.126 1.886 70.000 66.061 1.686 LGA V 29 V 29 0.677 0 0.064 0.090 1.405 81.818 74.805 1.405 LGA E 30 E 30 0.836 0 0.063 0.642 3.128 81.818 62.626 3.128 LGA V 31 V 31 1.151 0 0.100 0.154 1.666 65.455 63.377 1.666 LGA R 32 R 32 0.944 0 0.067 0.790 2.861 77.727 55.372 1.924 LGA C 33 C 33 1.220 0 0.512 0.886 3.263 53.636 50.606 2.375 LGA S 34 S 34 0.904 0 0.127 0.114 2.018 73.636 63.939 2.018 LGA D 35 D 35 2.525 0 0.166 1.031 5.275 39.091 24.545 5.275 LGA T 36 T 36 1.187 0 0.121 0.155 2.235 61.818 55.325 1.600 LGA K 37 K 37 1.879 0 0.606 1.242 3.646 37.727 37.374 3.329 LGA Y 38 Y 38 2.844 0 0.622 1.411 5.577 23.182 30.455 5.577 LGA T 39 T 39 3.571 0 0.561 0.568 4.332 12.727 10.390 4.190 LGA L 40 L 40 3.736 0 0.509 1.187 5.522 6.818 20.000 1.128 LGA C 41 C 41 4.131 0 0.385 1.156 7.994 4.091 14.286 1.293 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 3.167 3.202 4.134 39.379 31.499 18.936 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 33 2.21 67.073 65.900 1.429 LGA_LOCAL RMSD: 2.209 Number of atoms: 33 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 3.537 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 3.167 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.186078 * X + 0.837244 * Y + -0.514196 * Z + -0.016107 Y_new = 0.852800 * X + -0.397533 * Y + -0.338673 * Z + 6.774611 Z_new = -0.487962 * X + -0.375487 * Y + -0.787974 * Z + 7.480359 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.355967 0.509753 -2.696903 [DEG: 77.6912 29.2067 -154.5212 ] ZXZ: -0.988367 2.478308 -2.226661 [DEG: -56.6292 141.9966 -127.5783 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS390_3 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS390_3.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 33 2.21 65.900 3.17 REMARK ---------------------------------------------------------- MOLECULE T0955TS390_3 PFRMAT TS TARGET T0955 MODEL 3 PARENT N/A ATOM 1 N SER 1 -4.371 -12.734 6.637 1.00329.20 ATOM 2 CA SER 1 -4.971 -11.472 6.212 1.00329.20 ATOM 3 C SER 1 -4.249 -10.286 6.841 1.00329.20 ATOM 4 O SER 1 -3.984 -9.295 6.164 1.00329.20 ATOM 5 CB SER 1 -6.440 -11.440 6.584 1.00329.20 ATOM 6 OG SER 1 -7.156 -12.424 5.891 1.00329.20 ATOM 14 N GLN 2 -3.969 -10.509 8.177 1.00381.99 ATOM 15 CA GLN 2 -3.331 -9.532 8.917 1.00381.99 ATOM 16 C GLN 2 -2.027 -9.321 8.384 1.00381.99 ATOM 17 O GLN 2 -1.562 -8.185 8.322 1.00381.99 ATOM 18 CB GLN 2 -3.242 -9.920 10.395 1.00381.99 ATOM 19 CG GLN 2 -4.578 -9.921 11.120 1.00381.99 ATOM 20 CD GLN 2 -4.451 -10.358 12.567 1.00381.99 ATOM 21 OE1 GLN 2 -3.493 -11.039 12.942 1.00381.99 ATOM 22 NE2 GLN 2 -5.417 -9.968 13.389 1.00381.99 ATOM 31 N GLU 3 -1.371 -10.502 7.952 1.00558.08 ATOM 32 CA GLU 3 -0.017 -10.414 7.429 1.00558.08 ATOM 33 C GLU 3 0.117 -9.475 6.322 1.00558.08 ATOM 34 O GLU 3 1.044 -8.670 6.306 1.00558.08 ATOM 35 CB GLU 3 0.472 -11.787 6.959 1.00558.08 ATOM 36 CG GLU 3 1.890 -11.793 6.405 1.00558.08 ATOM 37 CD GLU 3 2.351 -13.163 5.992 1.00558.08 ATOM 38 OE1 GLU 3 1.616 -14.101 6.191 1.00558.08 ATOM 39 OE2 GLU 3 3.439 -13.272 5.478 1.00558.08 ATOM 46 N THR 4 -0.864 -9.551 5.313 1.00537.04 ATOM 47 CA THR 4 -0.870 -8.695 4.193 1.00537.04 ATOM 48 C THR 4 -1.037 -7.191 4.625 1.00537.04 ATOM 49 O THR 4 -0.310 -6.326 4.141 1.00537.04 ATOM 50 CB THR 4 -1.987 -9.122 3.225 1.00537.04 ATOM 51 OG1 THR 4 -1.734 -10.453 2.756 1.00537.04 ATOM 52 CG2 THR 4 -2.054 -8.175 2.036 1.00537.04 ATOM 60 N ARG 5 -2.043 -6.971 5.569 1.00473.55 ATOM 61 CA ARG 5 -2.276 -5.658 6.020 1.00473.55 ATOM 62 C ARG 5 -1.056 -5.062 6.704 1.00473.55 ATOM 63 O ARG 5 -0.780 -3.875 6.547 1.00473.55 ATOM 64 CB ARG 5 -3.461 -5.651 6.976 1.00473.55 ATOM 65 CG ARG 5 -4.810 -5.914 6.324 1.00473.55 ATOM 66 CD ARG 5 -5.894 -6.022 7.333 1.00473.55 ATOM 67 NE ARG 5 -7.181 -6.299 6.717 1.00473.55 ATOM 68 CZ ARG 5 -8.297 -6.633 7.394 1.00473.55 ATOM 69 NH1 ARG 5 -8.268 -6.728 8.705 1.00473.55 ATOM 70 NH2 ARG 5 -9.423 -6.866 6.740 1.00473.55 ATOM 84 N LYS 6 -0.303 -5.890 7.473 1.00418.93 ATOM 85 CA LYS 6 0.906 -5.416 8.100 1.00418.93 ATOM 86 C LYS 6 1.945 -5.040 7.195 1.00418.93 ATOM 87 O LYS 6 2.590 -4.013 7.387 1.00418.93 ATOM 88 CB LYS 6 1.472 -6.471 9.052 1.00418.93 ATOM 89 CG LYS 6 0.659 -6.670 10.325 1.00418.93 ATOM 90 CD LYS 6 1.251 -7.772 11.191 1.00418.93 ATOM 91 CE LYS 6 0.427 -7.988 12.452 1.00418.93 ATOM 92 NZ LYS 6 0.974 -9.087 13.293 1.00418.93 ATOM 106 N LYS 7 2.168 -5.853 6.140 1.00460.44 ATOM 107 CA LYS 7 3.079 -5.540 5.149 1.00460.44 ATOM 108 C LYS 7 2.712 -4.273 4.358 1.00460.44 ATOM 109 O LYS 7 3.587 -3.472 4.038 1.00460.44 ATOM 110 CB LYS 7 3.213 -6.747 4.220 1.00460.44 ATOM 111 CG LYS 7 3.956 -7.929 4.828 1.00460.44 ATOM 112 CD LYS 7 4.031 -9.095 3.854 1.00460.44 ATOM 113 CE LYS 7 4.785 -10.273 4.456 1.00460.44 ATOM 114 NZ LYS 7 4.832 -11.434 3.528 1.00460.44 ATOM 128 N CYS 8 1.378 -4.100 4.051 1.00373.14 ATOM 129 CA CYS 8 0.907 -2.958 3.387 1.00373.14 ATOM 130 C CYS 8 1.086 -1.758 4.219 1.00373.14 ATOM 131 O CYS 8 1.328 -0.673 3.693 1.00373.14 ATOM 132 CB CYS 8 -0.572 -3.116 3.031 1.00373.14 ATOM 133 SG CYS 8 -0.889 -4.308 1.708 1.00373.14 ATOM 138 N THR 9 0.989 -1.863 5.554 1.00355.44 ATOM 139 CA THR 9 1.261 -0.795 6.451 1.00355.44 ATOM 140 C THR 9 2.665 -0.312 6.388 1.00355.44 ATOM 141 O THR 9 2.903 0.894 6.366 1.00355.44 ATOM 142 CB THR 9 0.937 -1.213 7.898 1.00355.44 ATOM 143 OG1 THR 9 -0.453 -1.542 8.003 1.00355.44 ATOM 144 CG2 THR 9 1.262 -0.084 8.865 1.00355.44 ATOM 152 N GLU 10 3.588 -1.212 6.355 1.00355.54 ATOM 153 CA GLU 10 4.966 -0.895 6.201 1.00355.54 ATOM 154 C GLU 10 5.241 -0.250 4.956 1.00355.54 ATOM 155 O GLU 10 6.043 0.681 4.908 1.00355.54 ATOM 156 CB GLU 10 5.831 -2.153 6.300 1.00355.54 ATOM 157 CG GLU 10 5.923 -2.744 7.700 1.00355.54 ATOM 158 CD GLU 10 6.844 -3.930 7.775 1.00355.54 ATOM 159 OE1 GLU 10 7.351 -4.330 6.755 1.00355.54 ATOM 160 OE2 GLU 10 7.041 -4.436 8.855 1.00355.54 ATOM 167 N MET 11 4.568 -0.709 3.829 1.00335.40 ATOM 168 CA MET 11 4.705 -0.090 2.589 1.00335.40 ATOM 169 C MET 11 4.301 1.368 2.633 1.00335.40 ATOM 170 O MET 11 5.001 2.217 2.084 1.00335.40 ATOM 171 CB MET 11 3.881 -0.858 1.557 1.00335.40 ATOM 172 CG MET 11 4.439 -2.228 1.199 1.00335.40 ATOM 173 SD MET 11 3.345 -3.160 0.109 1.00335.40 ATOM 174 CE MET 11 3.882 -4.836 0.443 1.00335.40 ATOM 184 N LYS 12 3.121 1.653 3.326 1.00373.52 ATOM 185 CA LYS 12 2.655 3.018 3.503 1.00373.52 ATOM 186 C LYS 12 3.656 3.884 4.054 1.00373.52 ATOM 187 O LYS 12 3.825 5.008 3.585 1.00373.52 ATOM 188 CB LYS 12 1.423 3.073 4.409 1.00373.52 ATOM 189 CG LYS 12 0.973 4.482 4.772 1.00373.52 ATOM 190 CD LYS 12 -0.343 4.461 5.537 1.00373.52 ATOM 191 CE LYS 12 -0.807 5.868 5.881 1.00373.52 ATOM 192 NZ LYS 12 -2.115 5.865 6.591 1.00373.52 ATOM 206 N LYS 13 4.345 3.279 5.110 1.00387.20 ATOM 207 CA LYS 13 5.332 4.144 5.732 1.00387.20 ATOM 208 C LYS 13 6.395 4.509 4.782 1.00387.20 ATOM 209 O LYS 13 6.759 5.680 4.682 1.00387.20 ATOM 210 CB LYS 13 5.954 3.478 6.961 1.00387.20 ATOM 211 CG LYS 13 5.005 3.322 8.141 1.00387.20 ATOM 212 CD LYS 13 5.679 2.609 9.303 1.00387.20 ATOM 213 CE LYS 13 4.717 2.408 10.464 1.00387.20 ATOM 214 NZ LYS 13 5.352 1.675 11.593 1.00387.20 ATOM 228 N LYS 14 6.915 3.419 4.033 1.00246.63 ATOM 229 CA LYS 14 7.919 3.512 3.082 1.00246.63 ATOM 230 C LYS 14 7.689 4.362 1.856 1.00246.63 ATOM 231 O LYS 14 8.644 4.844 1.253 1.00246.63 ATOM 232 CB LYS 14 8.261 2.086 2.649 1.00246.63 ATOM 233 CG LYS 14 8.977 1.261 3.710 1.00246.63 ATOM 234 CD LYS 14 9.201 -0.169 3.241 1.00246.63 ATOM 235 CE LYS 14 9.887 -1.003 4.312 1.00246.63 ATOM 236 NZ LYS 14 10.082 -2.414 3.880 1.00246.63 ATOM 250 N PHE 15 6.306 4.502 1.555 1.00187.97 ATOM 251 CA PHE 15 5.914 5.402 0.443 1.00187.97 ATOM 252 C PHE 15 5.499 6.789 0.794 1.00187.97 ATOM 253 O PHE 15 4.786 7.432 0.026 1.00187.97 ATOM 254 CB PHE 15 4.762 4.775 -0.345 1.00187.97 ATOM 255 CG PHE 15 5.156 3.553 -1.125 1.00187.97 ATOM 256 CD1 PHE 15 4.569 2.324 -0.861 1.00187.97 ATOM 257 CD2 PHE 15 6.115 3.629 -2.123 1.00187.97 ATOM 258 CE1 PHE 15 4.931 1.200 -1.577 1.00187.97 ATOM 259 CE2 PHE 15 6.478 2.507 -2.842 1.00187.97 ATOM 260 CZ PHE 15 5.885 1.291 -2.568 1.00187.97 ATOM 270 N LYS 16 5.941 7.242 1.921 1.00185.89 ATOM 271 CA LYS 16 5.946 8.577 2.483 1.00185.89 ATOM 272 C LYS 16 4.628 9.060 2.721 1.00185.89 ATOM 273 O LYS 16 4.248 10.101 2.188 1.00185.89 ATOM 274 CB LYS 16 6.670 9.569 1.570 1.00185.89 ATOM 275 CG LYS 16 8.135 9.240 1.320 1.00185.89 ATOM 276 CD LYS 16 8.797 10.295 0.448 1.00185.89 ATOM 277 CE LYS 16 10.252 9.949 0.167 1.00185.89 ATOM 278 NZ LYS 16 10.901 10.952 -0.721 1.00185.89 ATOM 292 N ASN 17 3.964 8.280 3.533 1.00159.17 ATOM 293 CA ASN 17 2.700 8.416 4.114 1.00159.17 ATOM 294 C ASN 17 1.546 8.696 3.309 1.00159.17 ATOM 295 O ASN 17 0.716 9.519 3.690 1.00159.17 ATOM 296 CB ASN 17 2.786 9.488 5.185 1.00159.17 ATOM 297 CG ASN 17 3.696 9.101 6.317 1.00159.17 ATOM 298 OD1 ASN 17 3.717 7.942 6.746 1.00159.17 ATOM 299 ND2 ASN 17 4.451 10.050 6.809 1.00159.17 ATOM 306 N CYS 18 1.547 7.952 2.177 1.00118.38 ATOM 307 CA CYS 18 0.590 8.048 1.185 1.00118.38 ATOM 308 C CYS 18 -0.243 6.884 1.500 1.00118.38 ATOM 309 O CYS 18 0.278 5.838 1.880 1.00118.38 ATOM 310 CB CYS 18 1.176 7.973 -0.225 1.00118.38 ATOM 311 SG CYS 18 2.396 9.258 -0.588 1.00118.38 ATOM 317 N GLU 19 -1.506 6.884 1.397 1.00 80.85 ATOM 318 CA GLU 19 -2.363 5.805 1.768 1.00 80.85 ATOM 319 C GLU 19 -2.140 4.698 0.846 1.00 80.85 ATOM 320 O GLU 19 -1.845 4.922 -0.326 1.00 80.85 ATOM 321 CB GLU 19 -3.835 6.222 1.744 1.00 80.85 ATOM 322 CG GLU 19 -4.220 7.240 2.809 1.00 80.85 ATOM 323 CD GLU 19 -4.241 6.658 4.194 1.00 80.85 ATOM 324 OE1 GLU 19 -4.872 5.646 4.384 1.00 80.85 ATOM 325 OE2 GLU 19 -3.625 7.226 5.065 1.00 80.85 ATOM 332 N VAL 20 -2.311 3.470 1.450 1.00 78.11 ATOM 333 CA VAL 20 -2.215 2.213 0.880 1.00 78.11 ATOM 334 C VAL 20 -3.540 1.521 1.220 1.00 78.11 ATOM 335 O VAL 20 -4.025 1.636 2.344 1.00 78.11 ATOM 336 CB VAL 20 -1.003 1.445 1.443 1.00 78.11 ATOM 337 CG1 VAL 20 -0.971 0.026 0.897 1.00 78.11 ATOM 338 CG2 VAL 20 0.281 2.184 1.102 1.00 78.11 ATOM 348 N ARG 21 -4.013 0.850 0.207 1.00 37.05 ATOM 349 CA ARG 21 -5.144 0.049 0.087 1.00 37.05 ATOM 350 C ARG 21 -4.674 -1.271 -0.558 1.00 37.05 ATOM 351 O ARG 21 -4.061 -1.252 -1.622 1.00 37.05 ATOM 352 CB ARG 21 -6.208 0.741 -0.753 1.00 37.05 ATOM 353 CG ARG 21 -6.753 2.031 -0.161 1.00 37.05 ATOM 354 CD ARG 21 -7.563 1.777 1.057 1.00 37.05 ATOM 355 NE ARG 21 -8.139 3.001 1.591 1.00 37.05 ATOM 356 CZ ARG 21 -7.521 3.816 2.469 1.00 37.05 ATOM 357 NH1 ARG 21 -6.315 3.525 2.901 1.00 37.05 ATOM 358 NH2 ARG 21 -8.131 4.909 2.896 1.00 37.05 ATOM 372 N CYS 22 -4.976 -2.394 0.100 1.00 36.61 ATOM 373 CA CYS 22 -4.642 -3.602 -0.652 1.00 36.61 ATOM 374 C CYS 22 -5.716 -4.528 -1.010 1.00 36.61 ATOM 375 O CYS 22 -6.082 -5.387 -0.213 1.00 36.61 ATOM 376 CB CYS 22 -3.579 -4.331 0.171 1.00 36.61 ATOM 377 SG CYS 22 -2.095 -3.323 0.408 1.00 36.61 ATOM 382 N ASP 23 -6.191 -4.343 -2.191 1.00 34.58 ATOM 383 CA ASP 23 -7.504 -4.801 -2.807 1.00 34.58 ATOM 384 C ASP 23 -8.045 -6.107 -2.535 1.00 34.58 ATOM 385 O ASP 23 -9.085 -6.220 -1.890 1.00 34.58 ATOM 386 CB ASP 23 -7.424 -4.737 -4.335 1.00 34.58 ATOM 387 CG ASP 23 -7.442 -3.312 -4.870 1.00 34.58 ATOM 388 OD1 ASP 23 -7.759 -2.420 -4.119 1.00 34.58 ATOM 389 OD2 ASP 23 -7.138 -3.128 -6.025 1.00 34.58 ATOM 394 N GLU 24 -7.388 -7.135 -2.989 1.00 47.17 ATOM 395 CA GLU 24 -7.761 -8.472 -2.861 1.00 47.17 ATOM 396 C GLU 24 -6.724 -9.481 -3.168 1.00 47.17 ATOM 397 O GLU 24 -5.800 -9.205 -3.930 1.00 47.17 ATOM 398 CB GLU 24 -8.975 -8.724 -3.757 1.00 47.17 ATOM 399 CG GLU 24 -8.709 -8.540 -5.245 1.00 47.17 ATOM 400 CD GLU 24 -9.947 -8.694 -6.084 1.00 47.17 ATOM 401 OE1 GLU 24 -11.002 -8.871 -5.525 1.00 47.17 ATOM 402 OE2 GLU 24 -9.836 -8.635 -7.286 1.00 47.17 ATOM 409 N SER 25 -6.792 -10.757 -2.600 1.00 46.47 ATOM 410 CA SER 25 -6.069 -11.888 -3.317 1.00 46.47 ATOM 411 C SER 25 -4.657 -11.688 -3.219 1.00 46.47 ATOM 412 O SER 25 -3.893 -12.320 -3.945 1.00 46.47 ATOM 413 CB SER 25 -6.428 -11.978 -4.787 1.00 46.47 ATOM 414 OG SER 25 -7.809 -12.149 -4.958 1.00 46.47 ATOM 420 N ASN 26 -4.273 -10.741 -2.237 1.00 36.86 ATOM 421 CA ASN 26 -2.934 -10.512 -1.983 1.00 36.86 ATOM 422 C ASN 26 -2.153 -10.150 -3.118 1.00 36.86 ATOM 423 O ASN 26 -0.962 -10.454 -3.169 1.00 36.86 ATOM 424 CB ASN 26 -2.322 -11.734 -1.324 1.00 36.86 ATOM 425 CG ASN 26 -2.960 -12.057 -0.001 1.00 36.86 ATOM 426 OD1 ASN 26 -3.336 -11.156 0.757 1.00 36.86 ATOM 427 ND2 ASN 26 -3.089 -13.326 0.291 1.00 36.86 ATOM 434 N HIS 27 -2.874 -9.435 -4.115 1.00 28.17 ATOM 435 CA HIS 27 -2.108 -9.099 -5.224 1.00 28.17 ATOM 436 C HIS 27 -1.640 -7.576 -5.356 1.00 28.17 ATOM 437 O HIS 27 -0.450 -7.308 -5.505 1.00 28.17 ATOM 438 CB HIS 27 -2.918 -9.522 -6.454 1.00 28.17 ATOM 439 CG HIS 27 -2.168 -9.389 -7.743 1.00 28.17 ATOM 440 ND1 HIS 27 -0.989 -10.061 -7.991 1.00 28.17 ATOM 441 CD2 HIS 27 -2.428 -8.660 -8.854 1.00 28.17 ATOM 442 CE1 HIS 27 -0.558 -9.751 -9.201 1.00 28.17 ATOM 443 NE2 HIS 27 -1.412 -8.904 -9.744 1.00 28.17 ATOM 451 N CYS 28 -2.690 -6.677 -5.277 1.00 25.78 ATOM 452 CA CYS 28 -2.365 -5.324 -5.450 1.00 25.78 ATOM 453 C CYS 28 -2.276 -4.511 -4.281 1.00 25.78 ATOM 454 O CYS 28 -2.972 -4.763 -3.300 1.00 25.78 ATOM 455 CB CYS 28 -3.393 -4.666 -6.371 1.00 25.78 ATOM 456 SG CYS 28 -3.392 -5.315 -8.060 1.00 25.78 ATOM 462 N VAL 29 -1.383 -3.507 -4.425 1.00 21.92 ATOM 463 CA VAL 29 -1.082 -2.474 -3.551 1.00 21.92 ATOM 464 C VAL 29 -1.117 -1.217 -4.236 1.00 21.92 ATOM 465 O VAL 29 -0.211 -0.912 -5.008 1.00 21.92 ATOM 466 CB VAL 29 0.310 -2.676 -2.925 1.00 21.92 ATOM 467 CG1 VAL 29 0.587 -1.602 -1.884 1.00 21.92 ATOM 468 CG2 VAL 29 0.402 -4.063 -2.305 1.00 21.92 ATOM 478 N GLU 30 -2.199 -0.484 -3.925 1.00 21.77 ATOM 479 CA GLU 30 -2.608 0.753 -4.452 1.00 21.77 ATOM 480 C GLU 30 -2.145 1.855 -3.536 1.00 21.77 ATOM 481 O GLU 30 -2.376 1.792 -2.330 1.00 21.77 ATOM 482 CB GLU 30 -4.130 0.787 -4.620 1.00 21.77 ATOM 483 CG GLU 30 -4.668 2.082 -5.213 1.00 21.77 ATOM 484 CD GLU 30 -6.167 2.093 -5.327 1.00 21.77 ATOM 485 OE1 GLU 30 -6.782 1.130 -4.934 1.00 21.77 ATOM 486 OE2 GLU 30 -6.699 3.067 -5.805 1.00 21.77 ATOM 493 N VAL 31 -1.545 2.778 -4.126 1.00 21.93 ATOM 494 CA VAL 31 -1.170 3.947 -3.471 1.00 21.93 ATOM 495 C VAL 31 -1.829 5.250 -3.867 1.00 21.93 ATOM 496 O VAL 31 -1.932 5.553 -5.053 1.00 21.93 ATOM 497 CB VAL 31 0.353 4.097 -3.648 1.00 21.93 ATOM 498 CG1 VAL 31 0.841 5.381 -2.996 1.00 21.93 ATOM 499 CG2 VAL 31 1.063 2.888 -3.057 1.00 21.93 ATOM 509 N ARG 32 -2.228 5.940 -2.821 1.00 24.15 ATOM 510 CA ARG 32 -2.858 7.204 -2.906 1.00 24.15 ATOM 511 C ARG 32 -2.354 8.375 -2.139 1.00 24.15 ATOM 512 O ARG 32 -2.715 8.552 -0.977 1.00 24.15 ATOM 513 CB ARG 32 -4.316 7.011 -2.519 1.00 24.15 ATOM 514 CG ARG 32 -5.112 6.108 -3.448 1.00 24.15 ATOM 515 CD ARG 32 -6.549 6.067 -3.076 1.00 24.15 ATOM 516 NE ARG 32 -7.302 5.152 -3.920 1.00 24.15 ATOM 517 CZ ARG 32 -8.642 5.020 -3.900 1.00 24.15 ATOM 518 NH1 ARG 32 -9.362 5.748 -3.075 1.00 24.15 ATOM 519 NH2 ARG 32 -9.233 4.159 -4.710 1.00 24.15 ATOM 533 N CYS 33 -1.560 9.105 -2.840 1.00 25.33 ATOM 534 CA CYS 33 -0.880 10.328 -2.533 1.00 25.33 ATOM 535 C CYS 33 -1.672 11.443 -2.932 1.00 25.33 ATOM 536 O CYS 33 -2.454 11.335 -3.876 1.00 25.33 ATOM 537 CB CYS 33 0.475 10.422 -3.236 1.00 25.33 ATOM 538 SG CYS 33 1.460 11.860 -2.753 1.00 25.33 ATOM 544 N SER 34 -1.546 12.673 -2.234 1.00 18.29 ATOM 545 CA SER 34 -2.353 13.745 -2.562 1.00 18.29 ATOM 546 C SER 34 -1.736 14.309 -3.906 1.00 18.29 ATOM 547 O SER 34 -2.476 14.657 -4.826 1.00 18.29 ATOM 548 CB SER 34 -2.360 14.761 -1.436 1.00 18.29 ATOM 549 OG SER 34 -2.948 14.228 -0.282 1.00 18.29 ATOM 555 N ASP 35 -0.316 14.336 -3.880 1.00 18.92 ATOM 556 CA ASP 35 0.454 15.018 -4.856 1.00 18.92 ATOM 557 C ASP 35 0.705 14.295 -6.089 1.00 18.92 ATOM 558 O ASP 35 0.284 14.734 -7.157 1.00 18.92 ATOM 559 CB ASP 35 1.806 15.415 -4.259 1.00 18.92 ATOM 560 CG ASP 35 1.687 16.486 -3.182 1.00 18.92 ATOM 561 OD1 ASP 35 0.638 17.075 -3.072 1.00 18.92 ATOM 562 OD2 ASP 35 2.646 16.704 -2.481 1.00 18.92 ATOM 567 N THR 36 1.375 13.178 -6.011 1.00 16.45 ATOM 568 CA THR 36 1.742 12.382 -7.094 1.00 16.45 ATOM 569 C THR 36 1.214 11.114 -6.685 1.00 16.45 ATOM 570 O THR 36 1.827 10.424 -5.874 1.00 16.45 ATOM 571 CB THR 36 3.259 12.321 -7.348 1.00 16.45 ATOM 572 OG1 THR 36 3.762 13.643 -7.581 1.00 16.45 ATOM 573 CG2 THR 36 3.563 11.447 -8.555 1.00 16.45 ATOM 581 N LYS 37 0.064 10.814 -7.271 1.00 18.50 ATOM 582 CA LYS 37 -0.862 9.839 -6.882 1.00 18.50 ATOM 583 C LYS 37 0.014 8.542 -6.553 1.00 18.50 ATOM 584 O LYS 37 -0.228 7.873 -5.551 1.00 18.50 ATOM 585 CB LYS 37 -1.895 9.610 -7.987 1.00 18.50 ATOM 586 CG LYS 37 -2.974 8.594 -7.640 1.00 18.50 ATOM 587 CD LYS 37 -3.993 8.464 -8.762 1.00 18.50 ATOM 588 CE LYS 37 -5.048 7.419 -8.433 1.00 18.50 ATOM 589 NZ LYS 37 -6.064 7.295 -9.513 1.00 18.50 ATOM 603 N TYR 38 0.946 8.356 -7.457 1.00 23.57 ATOM 604 CA TYR 38 2.081 7.348 -7.539 1.00 23.57 ATOM 605 C TYR 38 1.584 5.985 -7.946 1.00 23.57 ATOM 606 O TYR 38 2.245 5.294 -8.716 1.00 23.57 ATOM 607 CB TYR 38 2.823 7.229 -6.205 1.00 23.57 ATOM 608 CG TYR 38 3.969 6.242 -6.230 1.00 23.57 ATOM 609 CD1 TYR 38 5.121 6.536 -6.944 1.00 23.57 ATOM 610 CD2 TYR 38 3.866 5.043 -5.541 1.00 23.57 ATOM 611 CE1 TYR 38 6.168 5.634 -6.967 1.00 23.57 ATOM 612 CE2 TYR 38 4.912 4.142 -5.564 1.00 23.57 ATOM 613 CZ TYR 38 6.060 4.434 -6.273 1.00 23.57 ATOM 614 OH TYR 38 7.102 3.537 -6.296 1.00 23.57 ATOM 624 N THR 39 0.345 5.498 -7.444 1.00 26.42 ATOM 625 CA THR 39 -0.446 4.369 -7.816 1.00 26.42 ATOM 626 C THR 39 0.322 3.186 -7.465 1.00 26.42 ATOM 627 O THR 39 -0.174 2.323 -6.744 1.00 26.42 ATOM 628 CB THR 39 -0.795 4.351 -9.316 1.00 26.42 ATOM 629 OG1 THR 39 -1.548 5.524 -9.649 1.00 26.42 ATOM 630 CG2 THR 39 -1.611 3.114 -9.659 1.00 26.42 ATOM 638 N LEU 40 1.493 2.985 -7.856 1.00 28.87 ATOM 639 CA LEU 40 2.263 1.687 -7.594 1.00 28.87 ATOM 640 C LEU 40 1.580 0.425 -8.310 1.00 28.87 ATOM 641 O LEU 40 1.925 0.096 -9.441 1.00 28.87 ATOM 642 CB LEU 40 2.358 1.432 -6.084 1.00 28.87 ATOM 643 CG LEU 40 3.159 0.192 -5.668 1.00 28.87 ATOM 644 CD1 LEU 40 4.612 0.360 -6.091 1.00 28.87 ATOM 645 CD2 LEU 40 3.046 -0.005 -4.163 1.00 28.87 ATOM 657 N CYS 41 0.582 -0.340 -7.705 1.00 31.97 ATOM 658 CA CYS 41 0.074 -1.494 -8.268 1.00 31.97 ATOM 659 C CYS 41 -1.522 -1.688 -8.191 1.00 31.97 ATOM 660 O CYS 41 -2.220 -0.816 -7.643 1.00 31.97 ATOM 661 OXT CYS 41 -2.031 -2.668 -8.661 1.00 31.97 ATOM 662 CB CYS 41 0.792 -2.658 -7.585 1.00 31.97 ATOM 663 SG CYS 41 0.244 -4.291 -8.140 1.00 31.97 TER END