####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS390_2 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS390_2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 2.72 2.72 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 34 1 - 34 1.88 3.07 LCS_AVERAGE: 72.93 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 1 - 15 1.00 4.06 LONGEST_CONTINUOUS_SEGMENT: 15 2 - 16 0.89 3.95 LCS_AVERAGE: 23.85 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 15 34 41 3 3 4 23 31 32 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT Q 2 Q 2 15 34 41 5 14 23 26 31 32 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 3 E 3 15 34 41 12 14 23 26 31 32 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 4 T 4 15 34 41 12 14 23 26 31 32 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 5 R 5 15 34 41 12 14 23 26 31 32 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 6 K 6 15 34 41 12 14 23 26 31 32 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 7 K 7 15 34 41 12 14 23 26 31 32 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 8 C 8 15 34 41 12 14 23 26 31 32 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 9 T 9 15 34 41 12 14 23 26 31 32 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 10 E 10 15 34 41 12 14 23 26 31 32 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT M 11 M 11 15 34 41 12 14 23 26 31 32 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 12 K 12 15 34 41 12 14 23 26 31 32 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 13 K 13 15 34 41 12 14 23 26 31 32 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 14 K 14 15 34 41 12 14 23 26 31 32 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT F 15 F 15 15 34 41 7 14 23 26 31 32 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 16 K 16 15 34 41 3 4 10 26 31 32 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 17 N 17 7 34 41 3 7 9 18 28 32 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 18 C 18 7 34 41 5 13 23 26 31 32 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 19 E 19 7 34 41 5 13 23 26 31 32 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 20 V 20 7 34 41 5 14 23 26 31 32 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 21 R 21 7 34 41 5 14 23 26 31 32 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 22 C 22 7 34 41 5 8 19 24 31 32 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 23 D 23 7 34 41 3 3 17 24 31 32 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 24 E 24 7 34 41 3 4 7 14 22 30 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 25 S 25 4 34 41 7 14 23 26 31 32 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 26 N 26 4 34 41 3 4 7 9 28 31 33 34 36 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT H 27 H 27 7 34 41 3 8 17 24 31 32 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 28 C 28 7 34 41 7 14 23 26 31 32 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 29 V 29 7 34 41 3 11 21 26 31 32 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 30 E 30 7 34 41 4 11 21 26 31 32 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 31 V 31 7 34 41 4 14 23 26 31 32 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 32 R 32 7 34 41 7 14 23 26 31 32 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 33 C 33 7 34 41 7 14 23 26 31 32 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 34 S 34 6 34 41 3 8 16 23 31 32 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 35 D 35 6 10 41 3 5 6 8 18 25 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 36 T 36 6 10 41 3 6 6 8 18 27 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 37 K 37 6 10 41 3 6 6 8 18 25 30 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT Y 38 Y 38 6 10 41 3 6 6 8 18 25 32 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 39 T 39 6 10 41 3 6 6 8 18 25 32 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT L 40 L 40 6 10 41 3 6 6 19 25 32 34 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 41 C 41 6 10 41 3 6 6 8 15 25 33 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_AVERAGE LCS_A: 65.60 ( 23.85 72.93 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 12 14 23 26 31 32 34 40 40 40 41 41 41 41 41 41 41 41 41 41 GDT PERCENT_AT 29.27 34.15 56.10 63.41 75.61 78.05 82.93 97.56 97.56 97.56 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.26 0.46 0.98 1.16 1.53 1.61 1.86 2.61 2.61 2.61 2.72 2.72 2.72 2.72 2.72 2.72 2.72 2.72 2.72 2.72 GDT RMS_ALL_AT 4.63 4.46 3.38 3.32 3.09 3.07 2.97 2.73 2.73 2.73 2.72 2.72 2.72 2.72 2.72 2.72 2.72 2.72 2.72 2.72 # Checking swapping # possible swapping detected: E 3 E 3 # possible swapping detected: E 10 E 10 # possible swapping detected: E 24 E 24 # possible swapping detected: E 30 E 30 # possible swapping detected: D 35 D 35 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 2.439 0 0.622 0.610 3.509 30.455 25.152 3.509 LGA Q 2 Q 2 3.272 0 0.246 0.964 4.066 25.455 19.192 3.098 LGA E 3 E 3 2.780 0 0.080 1.156 7.681 27.727 14.545 5.843 LGA T 4 T 4 2.575 0 0.016 1.087 4.898 32.727 28.312 4.898 LGA R 5 R 5 1.432 0 0.036 1.139 5.607 65.909 47.769 5.607 LGA K 6 K 6 1.339 0 0.039 0.768 4.936 69.545 42.828 3.838 LGA K 7 K 7 1.637 0 0.034 0.659 4.616 58.182 32.121 4.616 LGA C 8 C 8 1.573 0 0.069 0.770 4.941 61.818 50.000 4.941 LGA T 9 T 9 0.894 0 0.020 0.117 1.503 77.727 75.065 0.834 LGA E 10 E 10 0.721 0 0.037 0.633 3.097 81.818 57.778 2.788 LGA M 11 M 11 1.125 0 0.117 1.025 4.846 65.909 51.818 4.846 LGA K 12 K 12 2.086 0 0.101 0.608 2.940 38.636 37.374 2.868 LGA K 13 K 13 2.253 0 0.055 0.581 3.458 41.364 36.364 1.877 LGA K 14 K 14 1.682 0 0.102 0.637 2.684 47.727 55.152 2.684 LGA F 15 F 15 1.834 0 0.180 0.233 3.317 41.818 35.041 3.317 LGA K 16 K 16 2.487 0 0.286 1.353 9.072 48.182 22.222 9.072 LGA N 17 N 17 3.029 0 0.269 1.388 5.728 26.818 15.455 4.480 LGA C 18 C 18 1.962 0 0.380 0.467 3.511 34.545 37.879 2.135 LGA E 19 E 19 1.987 0 0.095 0.735 2.496 51.364 49.899 2.496 LGA V 20 V 20 2.063 0 0.125 0.173 2.604 38.636 38.442 2.478 LGA R 21 R 21 1.836 0 0.032 1.252 3.889 50.909 39.174 2.236 LGA C 22 C 22 2.260 0 0.260 0.950 5.940 36.364 28.788 5.940 LGA D 23 D 23 2.828 0 0.634 1.084 6.368 21.364 11.136 4.892 LGA E 24 E 24 3.708 0 0.470 0.928 8.024 31.364 13.939 6.827 LGA S 25 S 25 3.502 0 0.534 0.485 4.313 19.545 15.758 3.935 LGA N 26 N 26 5.629 0 0.138 1.166 11.636 5.909 2.955 9.329 LGA H 27 H 27 2.294 0 0.583 0.803 9.179 27.273 11.091 8.507 LGA C 28 C 28 1.914 0 0.295 0.711 4.308 58.182 44.242 4.308 LGA V 29 V 29 1.596 0 0.129 1.091 3.753 43.182 38.961 2.105 LGA E 30 E 30 2.318 0 0.178 0.762 3.634 41.364 30.909 3.634 LGA V 31 V 31 2.119 0 0.097 0.159 2.690 44.545 37.143 2.668 LGA R 32 R 32 1.664 0 0.345 0.861 2.949 41.818 43.636 2.496 LGA C 33 C 33 1.943 0 0.544 0.869 4.274 36.364 41.515 1.394 LGA S 34 S 34 0.656 0 0.159 0.194 3.212 55.000 49.697 2.620 LGA D 35 D 35 4.650 0 0.090 0.967 6.311 5.455 2.727 6.311 LGA T 36 T 36 4.466 0 0.491 0.891 6.035 4.545 3.636 4.539 LGA K 37 K 37 4.477 0 0.625 1.574 13.285 10.000 4.444 13.285 LGA Y 38 Y 38 4.221 0 0.150 1.282 6.985 7.273 4.545 6.985 LGA T 39 T 39 4.018 0 0.134 0.135 5.094 6.818 4.416 5.094 LGA L 40 L 40 2.704 0 0.253 0.960 4.485 19.545 32.500 1.277 LGA C 41 C 41 3.726 0 0.384 0.805 4.892 15.000 9.870 4.554 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 2.717 2.705 3.738 37.761 30.329 17.871 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 40 2.61 73.780 77.914 1.474 LGA_LOCAL RMSD: 2.613 Number of atoms: 40 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.727 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 2.717 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.727733 * X + -0.331941 * Y + 0.600183 * Z + 8.091219 Y_new = 0.655871 * X + -0.592742 * Y + 0.467430 * Z + -0.010929 Z_new = 0.200594 * X + 0.733807 * Y + 0.649068 * Z + 0.151471 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.408086 -0.201965 0.846598 [DEG: 137.9732 -11.5717 48.5065 ] ZXZ: 2.232484 0.864437 0.266842 [DEG: 127.9119 49.5286 15.2889 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS390_2 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS390_2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 40 2.61 77.914 2.72 REMARK ---------------------------------------------------------- MOLECULE T0955TS390_2 PFRMAT TS TARGET T0955 MODEL 2 PARENT N/A ATOM 1 N SER 1 0.252 -14.966 1.337 1.00289.86 ATOM 2 CA SER 1 -0.684 -13.847 1.408 1.00289.86 ATOM 3 C SER 1 -0.134 -12.730 2.287 1.00289.86 ATOM 4 O SER 1 -0.266 -11.556 1.947 1.00289.86 ATOM 5 CB SER 1 -2.021 -14.316 1.946 1.00289.86 ATOM 6 OG SER 1 -2.619 -15.237 1.076 1.00289.86 ATOM 14 N GLN 2 0.492 -13.249 3.433 1.00323.63 ATOM 15 CA GLN 2 1.012 -12.425 4.414 1.00323.63 ATOM 16 C GLN 2 2.073 -11.645 3.864 1.00323.63 ATOM 17 O GLN 2 2.224 -10.475 4.214 1.00323.63 ATOM 18 CB GLN 2 1.518 -13.237 5.610 1.00323.63 ATOM 19 CG GLN 2 1.947 -12.394 6.797 1.00323.63 ATOM 20 CD GLN 2 0.796 -11.608 7.396 1.00323.63 ATOM 21 OE1 GLN 2 -0.252 -12.170 7.726 1.00323.63 ATOM 22 NE2 GLN 2 0.984 -10.302 7.540 1.00323.63 ATOM 31 N GLU 3 2.873 -12.348 2.917 1.00449.95 ATOM 32 CA GLU 3 3.900 -11.480 2.306 1.00449.95 ATOM 33 C GLU 3 3.491 -10.278 1.620 1.00449.95 ATOM 34 O GLU 3 4.137 -9.241 1.753 1.00449.95 ATOM 35 CB GLU 3 4.726 -12.284 1.299 1.00449.95 ATOM 36 CG GLU 3 5.840 -11.494 0.629 1.00449.95 ATOM 37 CD GLU 3 6.678 -12.335 -0.294 1.00449.95 ATOM 38 OE1 GLU 3 6.441 -13.516 -0.372 1.00449.95 ATOM 39 OE2 GLU 3 7.558 -11.795 -0.923 1.00449.95 ATOM 46 N THR 4 2.367 -10.483 0.877 1.00419.12 ATOM 47 CA THR 4 1.832 -9.273 0.176 1.00419.12 ATOM 48 C THR 4 1.378 -8.215 1.153 1.00419.12 ATOM 49 O THR 4 1.692 -7.039 0.980 1.00419.12 ATOM 50 CB THR 4 0.655 -9.626 -0.753 1.00419.12 ATOM 51 OG1 THR 4 1.107 -10.516 -1.781 1.00419.12 ATOM 52 CG2 THR 4 0.085 -8.368 -1.390 1.00419.12 ATOM 60 N ARG 5 0.613 -8.665 2.214 1.00373.15 ATOM 61 CA ARG 5 0.104 -7.722 3.177 1.00373.15 ATOM 62 C ARG 5 1.250 -6.992 3.848 1.00373.15 ATOM 63 O ARG 5 1.162 -5.788 4.082 1.00373.15 ATOM 64 CB ARG 5 -0.743 -8.428 4.227 1.00373.15 ATOM 65 CG ARG 5 -2.100 -8.907 3.738 1.00373.15 ATOM 66 CD ARG 5 -2.996 -9.265 4.867 1.00373.15 ATOM 67 NE ARG 5 -2.530 -10.445 5.577 1.00373.15 ATOM 68 CZ ARG 5 -2.935 -11.703 5.318 1.00373.15 ATOM 69 NH1 ARG 5 -3.813 -11.929 4.366 1.00373.15 ATOM 70 NH2 ARG 5 -2.451 -12.712 6.021 1.00373.15 ATOM 84 N LYS 6 2.328 -7.713 4.151 1.00325.96 ATOM 85 CA LYS 6 3.540 -7.073 4.793 1.00325.96 ATOM 86 C LYS 6 4.093 -6.009 3.939 1.00325.96 ATOM 87 O LYS 6 4.307 -4.893 4.407 1.00325.96 ATOM 88 CB LYS 6 4.645 -8.092 5.075 1.00325.96 ATOM 89 CG LYS 6 5.881 -7.509 5.748 1.00325.96 ATOM 90 CD LYS 6 6.922 -8.586 6.020 1.00325.96 ATOM 91 CE LYS 6 8.103 -8.029 6.801 1.00325.96 ATOM 92 NZ LYS 6 8.907 -7.076 5.988 1.00325.96 ATOM 106 N LYS 7 4.342 -6.352 2.596 1.00344.31 ATOM 107 CA LYS 7 4.859 -5.377 1.714 1.00344.31 ATOM 108 C LYS 7 3.926 -4.181 1.553 1.00344.31 ATOM 109 O LYS 7 4.390 -3.045 1.473 1.00344.31 ATOM 110 CB LYS 7 5.145 -6.022 0.357 1.00344.31 ATOM 111 CG LYS 7 6.331 -6.977 0.351 1.00344.31 ATOM 112 CD LYS 7 6.521 -7.614 -1.018 1.00344.31 ATOM 113 CE LYS 7 7.706 -8.568 -1.025 1.00344.31 ATOM 114 NZ LYS 7 7.855 -9.260 -2.334 1.00344.31 ATOM 128 N CYS 8 2.604 -4.436 1.513 1.00268.64 ATOM 129 CA CYS 8 1.621 -3.360 1.385 1.00268.64 ATOM 130 C CYS 8 1.640 -2.387 2.561 1.00268.64 ATOM 131 O CYS 8 1.473 -1.184 2.369 1.00268.64 ATOM 132 CB CYS 8 0.216 -3.947 1.254 1.00268.64 ATOM 133 SG CYS 8 -0.050 -4.899 -0.261 1.00268.64 ATOM 139 N THR 9 1.857 -2.971 3.754 1.00259.70 ATOM 140 CA THR 9 2.066 -2.102 4.979 1.00259.70 ATOM 141 C THR 9 3.307 -1.239 4.838 1.00259.70 ATOM 142 O THR 9 3.271 -0.052 5.152 1.00259.70 ATOM 143 CB THR 9 2.193 -2.938 6.266 1.00259.70 ATOM 144 OG1 THR 9 0.980 -3.670 6.485 1.00259.70 ATOM 145 CG2 THR 9 2.462 -2.039 7.462 1.00259.70 ATOM 153 N GLU 10 4.358 -1.836 4.369 1.00262.02 ATOM 154 CA GLU 10 5.546 -1.078 4.167 1.00262.02 ATOM 155 C GLU 10 5.380 0.075 3.140 1.00262.02 ATOM 156 O GLU 10 5.916 1.162 3.340 1.00262.02 ATOM 157 CB GLU 10 6.663 -2.026 3.724 1.00262.02 ATOM 158 CG GLU 10 7.143 -2.982 4.807 1.00262.02 ATOM 159 CD GLU 10 8.171 -3.960 4.310 1.00262.02 ATOM 160 OE1 GLU 10 8.492 -3.916 3.147 1.00262.02 ATOM 161 OE2 GLU 10 8.635 -4.753 5.095 1.00262.02 ATOM 168 N MET 11 4.595 -0.241 2.031 1.00249.76 ATOM 169 CA MET 11 4.281 0.737 1.038 1.00249.76 ATOM 170 C MET 11 3.635 1.874 1.652 1.00249.76 ATOM 171 O MET 11 4.008 3.013 1.385 1.00249.76 ATOM 172 CB MET 11 3.386 0.151 -0.051 1.00249.76 ATOM 173 CG MET 11 4.063 -0.889 -0.931 1.00249.76 ATOM 174 SD MET 11 2.941 -1.612 -2.145 1.00249.76 ATOM 175 CE MET 11 3.739 -3.186 -2.449 1.00249.76 ATOM 185 N LYS 12 2.591 1.737 2.553 1.00271.50 ATOM 186 CA LYS 12 1.973 2.801 3.194 1.00271.50 ATOM 187 C LYS 12 2.954 3.633 3.938 1.00271.50 ATOM 188 O LYS 12 2.951 4.854 3.807 1.00271.50 ATOM 189 CB LYS 12 0.885 2.280 4.135 1.00271.50 ATOM 190 CG LYS 12 0.118 3.368 4.874 1.00271.50 ATOM 191 CD LYS 12 -0.951 2.774 5.779 1.00271.50 ATOM 192 CE LYS 12 -1.675 3.856 6.567 1.00271.50 ATOM 193 NZ LYS 12 -2.701 3.287 7.481 1.00271.50 ATOM 207 N LYS 13 3.780 3.018 4.694 1.00279.46 ATOM 208 CA LYS 13 4.649 3.738 5.500 1.00279.46 ATOM 209 C LYS 13 5.556 4.580 4.624 1.00279.46 ATOM 210 O LYS 13 5.846 5.726 4.957 1.00279.46 ATOM 211 CB LYS 13 5.450 2.789 6.392 1.00279.46 ATOM 212 CG LYS 13 4.640 2.135 7.503 1.00279.46 ATOM 213 CD LYS 13 5.496 1.184 8.326 1.00279.46 ATOM 214 CE LYS 13 4.706 0.581 9.477 1.00279.46 ATOM 215 NZ LYS 13 5.517 -0.385 10.264 1.00279.46 ATOM 229 N LYS 14 5.997 3.927 3.437 1.00178.84 ATOM 230 CA LYS 14 6.827 4.651 2.571 1.00178.84 ATOM 231 C LYS 14 6.302 5.814 1.938 1.00178.84 ATOM 232 O LYS 14 7.064 6.666 1.485 1.00178.84 ATOM 233 CB LYS 14 7.336 3.718 1.472 1.00178.84 ATOM 234 CG LYS 14 8.367 2.698 1.939 1.00178.84 ATOM 235 CD LYS 14 8.743 1.739 0.820 1.00178.84 ATOM 236 CE LYS 14 9.747 0.699 1.295 1.00178.84 ATOM 237 NZ LYS 14 10.094 -0.271 0.220 1.00178.84 ATOM 251 N PHE 15 4.880 5.874 1.899 1.00123.89 ATOM 252 CA PHE 15 4.223 6.949 1.269 1.00123.89 ATOM 253 C PHE 15 3.642 7.892 2.387 1.00123.89 ATOM 254 O PHE 15 2.763 8.706 2.112 1.00123.89 ATOM 255 CB PHE 15 3.125 6.419 0.346 1.00123.89 ATOM 256 CG PHE 15 3.630 5.508 -0.736 1.00123.89 ATOM 257 CD1 PHE 15 2.910 4.384 -1.109 1.00123.89 ATOM 258 CD2 PHE 15 4.828 5.774 -1.384 1.00123.89 ATOM 259 CE1 PHE 15 3.374 3.544 -2.105 1.00123.89 ATOM 260 CE2 PHE 15 5.293 4.938 -2.380 1.00123.89 ATOM 261 CZ PHE 15 4.565 3.821 -2.740 1.00123.89 ATOM 271 N LYS 16 4.183 7.740 3.637 1.00129.38 ATOM 272 CA LYS 16 3.972 8.473 4.866 1.00129.38 ATOM 273 C LYS 16 2.602 8.125 5.175 1.00129.38 ATOM 274 O LYS 16 2.342 7.487 6.194 1.00129.38 ATOM 275 CB LYS 16 4.155 9.986 4.727 1.00129.38 ATOM 276 CG LYS 16 5.587 10.423 4.446 1.00129.38 ATOM 277 CD LYS 16 5.690 11.936 4.328 1.00129.38 ATOM 278 CE LYS 16 7.116 12.374 4.033 1.00129.38 ATOM 279 NZ LYS 16 7.227 13.850 3.884 1.00129.38 ATOM 293 N ASN 17 1.593 8.451 4.411 1.00110.81 ATOM 294 CA ASN 17 0.222 8.003 4.800 1.00110.81 ATOM 295 C ASN 17 -0.805 7.799 3.824 1.00110.81 ATOM 296 O ASN 17 -1.987 7.843 4.155 1.00110.81 ATOM 297 CB ASN 17 -0.372 8.966 5.812 1.00110.81 ATOM 298 CG ASN 17 -0.531 10.355 5.262 1.00110.81 ATOM 299 OD1 ASN 17 -0.012 10.675 4.186 1.00110.81 ATOM 300 ND2 ASN 17 -1.241 11.189 5.979 1.00110.81 ATOM 307 N CYS 18 -0.472 7.547 2.533 1.00 82.41 ATOM 308 CA CYS 18 -1.413 7.810 1.491 1.00 82.41 ATOM 309 C CYS 18 -2.223 6.694 1.083 1.00 82.41 ATOM 310 O CYS 18 -2.051 6.179 -0.021 1.00 82.41 ATOM 311 CB CYS 18 -0.692 8.326 0.246 1.00 82.41 ATOM 312 SG CYS 18 0.278 9.829 0.523 1.00 82.41 ATOM 318 N GLU 19 -3.176 6.314 2.066 1.00 52.52 ATOM 319 CA GLU 19 -4.301 5.416 1.604 1.00 52.52 ATOM 320 C GLU 19 -3.831 4.275 0.599 1.00 52.52 ATOM 321 O GLU 19 -4.116 4.347 -0.594 1.00 52.52 ATOM 322 CB GLU 19 -5.390 6.261 0.939 1.00 52.52 ATOM 323 CG GLU 19 -6.032 7.293 1.856 1.00 52.52 ATOM 324 CD GLU 19 -7.197 7.997 1.218 1.00 52.52 ATOM 325 OE1 GLU 19 -7.407 7.814 0.044 1.00 52.52 ATOM 326 OE2 GLU 19 -7.877 8.721 1.907 1.00 52.52 ATOM 333 N VAL 20 -3.098 3.203 1.145 1.00 50.52 ATOM 334 CA VAL 20 -2.842 2.011 0.387 1.00 50.52 ATOM 335 C VAL 20 -3.636 0.769 0.684 1.00 50.52 ATOM 336 O VAL 20 -3.303 0.033 1.609 1.00 50.52 ATOM 337 CB VAL 20 -1.352 1.656 0.548 1.00 50.52 ATOM 338 CG1 VAL 20 -1.008 0.418 -0.265 1.00 50.52 ATOM 339 CG2 VAL 20 -0.490 2.836 0.125 1.00 50.52 ATOM 349 N ARG 21 -4.615 0.631 -0.126 1.00 23.96 ATOM 350 CA ARG 21 -5.629 -0.319 0.014 1.00 23.96 ATOM 351 C ARG 21 -5.272 -1.661 -0.775 1.00 23.96 ATOM 352 O ARG 21 -4.874 -1.605 -1.937 1.00 23.96 ATOM 353 CB ARG 21 -6.933 0.286 -0.484 1.00 23.96 ATOM 354 CG ARG 21 -8.158 -0.595 -0.299 1.00 23.96 ATOM 355 CD ARG 21 -9.399 0.086 -0.753 1.00 23.96 ATOM 356 NE ARG 21 -9.518 0.085 -2.203 1.00 23.96 ATOM 357 CZ ARG 21 -10.094 -0.898 -2.922 1.00 23.96 ATOM 358 NH1 ARG 21 -10.596 -1.950 -2.314 1.00 23.96 ATOM 359 NH2 ARG 21 -10.152 -0.806 -4.239 1.00 23.96 ATOM 373 N CYS 22 -5.489 -2.805 0.036 1.00 23.70 ATOM 374 CA CYS 22 -5.153 -4.078 -0.541 1.00 23.70 ATOM 375 C CYS 22 -6.203 -5.067 0.021 1.00 23.70 ATOM 376 O CYS 22 -5.973 -5.686 1.057 1.00 23.70 ATOM 377 CB CYS 22 -3.732 -4.508 -0.177 1.00 23.70 ATOM 378 SG CYS 22 -3.216 -6.068 -0.932 1.00 23.70 ATOM 384 N ASP 23 -7.232 -5.128 -0.700 1.00 22.69 ATOM 385 CA ASP 23 -8.488 -5.931 -0.328 1.00 22.69 ATOM 386 C ASP 23 -8.898 -7.063 -1.101 1.00 22.69 ATOM 387 O ASP 23 -9.445 -8.018 -0.555 1.00 22.69 ATOM 388 CB ASP 23 -9.725 -5.029 -0.311 1.00 22.69 ATOM 389 CG ASP 23 -9.667 -3.965 0.776 1.00 22.69 ATOM 390 OD1 ASP 23 -9.422 -4.313 1.908 1.00 22.69 ATOM 391 OD2 ASP 23 -9.869 -2.815 0.466 1.00 22.69 ATOM 396 N GLU 24 -8.632 -7.007 -2.499 1.00 33.15 ATOM 397 CA GLU 24 -9.565 -7.730 -3.267 1.00 33.15 ATOM 398 C GLU 24 -8.896 -9.131 -3.386 1.00 33.15 ATOM 399 O GLU 24 -8.516 -9.542 -4.481 1.00 33.15 ATOM 400 CB GLU 24 -9.817 -7.069 -4.624 1.00 33.15 ATOM 401 CG GLU 24 -10.304 -5.630 -4.543 1.00 33.15 ATOM 402 CD GLU 24 -11.698 -5.514 -3.991 1.00 33.15 ATOM 403 OE1 GLU 24 -12.436 -6.465 -4.087 1.00 33.15 ATOM 404 OE2 GLU 24 -12.025 -4.473 -3.471 1.00 33.15 ATOM 411 N SER 25 -8.727 -9.944 -2.232 1.00 33.09 ATOM 412 CA SER 25 -8.715 -11.417 -2.449 1.00 33.09 ATOM 413 C SER 25 -7.519 -11.584 -3.471 1.00 33.09 ATOM 414 O SER 25 -7.745 -11.899 -4.636 1.00 33.09 ATOM 415 CB SER 25 -10.028 -11.930 -3.007 1.00 33.09 ATOM 416 OG SER 25 -11.085 -11.664 -2.127 1.00 33.09 ATOM 422 N ASN 26 -6.321 -11.352 -2.897 1.00 28.18 ATOM 423 CA ASN 26 -5.033 -11.470 -3.390 1.00 28.18 ATOM 424 C ASN 26 -4.527 -10.568 -4.370 1.00 28.18 ATOM 425 O ASN 26 -3.392 -10.716 -4.819 1.00 28.18 ATOM 426 CB ASN 26 -4.867 -12.877 -3.935 1.00 28.18 ATOM 427 CG ASN 26 -5.082 -13.932 -2.885 1.00 28.18 ATOM 428 OD1 ASN 26 -4.661 -13.774 -1.733 1.00 28.18 ATOM 429 ND2 ASN 26 -5.728 -15.005 -3.260 1.00 28.18 ATOM 436 N HIS 27 -5.417 -9.539 -4.745 1.00 21.68 ATOM 437 CA HIS 27 -5.101 -8.393 -5.466 1.00 21.68 ATOM 438 C HIS 27 -4.286 -7.572 -4.475 1.00 21.68 ATOM 439 O HIS 27 -4.526 -7.640 -3.272 1.00 21.68 ATOM 440 CB HIS 27 -6.354 -7.658 -5.951 1.00 21.68 ATOM 441 CG HIS 27 -6.073 -6.604 -6.977 1.00 21.68 ATOM 442 ND1 HIS 27 -5.632 -5.341 -6.644 1.00 21.68 ATOM 443 CD2 HIS 27 -6.171 -6.626 -8.327 1.00 21.68 ATOM 444 CE1 HIS 27 -5.469 -4.630 -7.748 1.00 21.68 ATOM 445 NE2 HIS 27 -5.791 -5.387 -8.781 1.00 21.68 ATOM 453 N CYS 28 -3.412 -6.876 -5.066 1.00 20.60 ATOM 454 CA CYS 28 -2.432 -6.017 -4.575 1.00 20.60 ATOM 455 C CYS 28 -3.172 -4.602 -4.463 1.00 20.60 ATOM 456 O CYS 28 -4.398 -4.553 -4.392 1.00 20.60 ATOM 457 CB CYS 28 -1.224 -5.980 -5.512 1.00 20.60 ATOM 458 SG CYS 28 0.258 -5.249 -4.778 1.00 20.60 ATOM 464 N VAL 29 -2.297 -3.573 -4.468 1.00 17.61 ATOM 465 CA VAL 29 -2.584 -2.305 -3.999 1.00 17.61 ATOM 466 C VAL 29 -3.179 -1.349 -4.872 1.00 17.61 ATOM 467 O VAL 29 -2.892 -1.342 -6.067 1.00 17.61 ATOM 468 CB VAL 29 -1.278 -1.680 -3.471 1.00 17.61 ATOM 469 CG1 VAL 29 -0.728 -2.496 -2.311 1.00 17.61 ATOM 470 CG2 VAL 29 -0.258 -1.585 -4.596 1.00 17.61 ATOM 480 N GLU 30 -4.026 -0.522 -4.228 1.00 17.56 ATOM 481 CA GLU 30 -4.436 0.787 -4.798 1.00 17.56 ATOM 482 C GLU 30 -3.784 1.881 -4.036 1.00 17.56 ATOM 483 O GLU 30 -4.211 2.198 -2.928 1.00 17.56 ATOM 484 CB GLU 30 -5.954 0.978 -4.757 1.00 17.56 ATOM 485 CG GLU 30 -6.432 2.331 -5.264 1.00 17.56 ATOM 486 CD GLU 30 -7.906 2.546 -5.056 1.00 17.56 ATOM 487 OE1 GLU 30 -8.573 1.619 -4.664 1.00 17.56 ATOM 488 OE2 GLU 30 -8.365 3.639 -5.290 1.00 17.56 ATOM 495 N VAL 31 -2.697 2.435 -4.760 1.00 17.07 ATOM 496 CA VAL 31 -1.838 3.409 -3.998 1.00 17.07 ATOM 497 C VAL 31 -2.351 4.698 -4.322 1.00 17.07 ATOM 498 O VAL 31 -2.231 5.139 -5.463 1.00 17.07 ATOM 499 CB VAL 31 -0.347 3.355 -4.384 1.00 17.07 ATOM 500 CG1 VAL 31 0.432 4.435 -3.648 1.00 17.07 ATOM 501 CG2 VAL 31 0.217 1.978 -4.077 1.00 17.07 ATOM 511 N ARG 32 -2.967 5.464 -3.411 1.00 18.55 ATOM 512 CA ARG 32 -3.288 6.819 -3.768 1.00 18.55 ATOM 513 C ARG 32 -2.143 7.694 -3.206 1.00 18.55 ATOM 514 O ARG 32 -1.341 7.220 -2.405 1.00 18.55 ATOM 515 CB ARG 32 -4.634 7.239 -3.195 1.00 18.55 ATOM 516 CG ARG 32 -5.822 6.436 -3.700 1.00 18.55 ATOM 517 CD ARG 32 -7.046 6.707 -2.904 1.00 18.55 ATOM 518 NE ARG 32 -8.171 5.899 -3.347 1.00 18.55 ATOM 519 CZ ARG 32 -9.393 5.913 -2.779 1.00 18.55 ATOM 520 NH1 ARG 32 -9.631 6.694 -1.749 1.00 18.55 ATOM 521 NH2 ARG 32 -10.352 5.139 -3.258 1.00 18.55 ATOM 535 N CYS 33 -2.009 8.949 -3.567 1.00 19.39 ATOM 536 CA CYS 33 -1.116 9.958 -3.110 1.00 19.39 ATOM 537 C CYS 33 -1.556 11.187 -3.739 1.00 19.39 ATOM 538 O CYS 33 -1.853 11.199 -4.932 1.00 19.39 ATOM 539 CB CYS 33 0.339 9.667 -3.484 1.00 19.39 ATOM 540 SG CYS 33 1.542 10.724 -2.644 1.00 19.39 ATOM 546 N SER 34 -1.573 12.218 -2.863 1.00 15.22 ATOM 547 CA SER 34 -1.616 13.566 -3.175 1.00 15.22 ATOM 548 C SER 34 -0.402 14.323 -3.456 1.00 15.22 ATOM 549 O SER 34 -0.370 15.109 -4.401 1.00 15.22 ATOM 550 CB SER 34 -2.331 14.259 -2.030 1.00 15.22 ATOM 551 OG SER 34 -3.665 13.839 -1.943 1.00 15.22 ATOM 557 N ASP 35 0.707 14.192 -2.723 1.00 15.83 ATOM 558 CA ASP 35 1.826 15.087 -3.188 1.00 15.83 ATOM 559 C ASP 35 2.989 14.539 -3.936 1.00 15.83 ATOM 560 O ASP 35 3.598 15.247 -4.735 1.00 15.83 ATOM 561 CB ASP 35 2.421 15.817 -1.981 1.00 15.83 ATOM 562 CG ASP 35 1.408 16.702 -1.266 1.00 15.83 ATOM 563 OD1 ASP 35 0.831 17.548 -1.907 1.00 15.83 ATOM 564 OD2 ASP 35 1.221 16.523 -0.086 1.00 15.83 ATOM 569 N THR 36 3.274 13.181 -3.626 1.00 13.72 ATOM 570 CA THR 36 4.620 12.703 -4.179 1.00 13.72 ATOM 571 C THR 36 4.272 11.629 -5.233 1.00 13.72 ATOM 572 O THR 36 5.130 10.832 -5.606 1.00 13.72 ATOM 573 CB THR 36 5.551 12.115 -3.103 1.00 13.72 ATOM 574 OG1 THR 36 4.896 11.021 -2.446 1.00 13.72 ATOM 575 CG2 THR 36 5.914 13.175 -2.074 1.00 13.72 ATOM 583 N LYS 37 2.957 11.648 -5.711 1.00 15.15 ATOM 584 CA LYS 37 2.778 10.886 -6.990 1.00 15.15 ATOM 585 C LYS 37 2.878 9.378 -6.920 1.00 15.15 ATOM 586 O LYS 37 2.039 8.679 -7.483 1.00 15.15 ATOM 587 CB LYS 37 3.798 11.372 -8.021 1.00 15.15 ATOM 588 CG LYS 37 3.621 12.824 -8.446 1.00 15.15 ATOM 589 CD LYS 37 4.671 13.234 -9.466 1.00 15.15 ATOM 590 CE LYS 37 4.506 14.690 -9.879 1.00 15.15 ATOM 591 NZ LYS 37 5.551 15.116 -10.849 1.00 15.15 ATOM 605 N TYR 38 3.823 8.750 -6.278 1.00 18.11 ATOM 606 CA TYR 38 4.174 7.321 -6.337 1.00 18.11 ATOM 607 C TYR 38 3.134 6.317 -6.463 1.00 18.11 ATOM 608 O TYR 38 2.220 6.269 -5.641 1.00 18.11 ATOM 609 CB TYR 38 4.985 6.945 -5.096 1.00 18.11 ATOM 610 CG TYR 38 6.388 7.511 -5.089 1.00 18.11 ATOM 611 CD1 TYR 38 6.699 8.584 -4.267 1.00 18.11 ATOM 612 CD2 TYR 38 7.362 6.958 -5.906 1.00 18.11 ATOM 613 CE1 TYR 38 7.980 9.101 -4.262 1.00 18.11 ATOM 614 CE2 TYR 38 8.643 7.475 -5.901 1.00 18.11 ATOM 615 CZ TYR 38 8.953 8.543 -5.083 1.00 18.11 ATOM 616 OH TYR 38 10.229 9.057 -5.077 1.00 18.11 ATOM 626 N THR 39 3.233 5.498 -7.461 1.00 20.16 ATOM 627 CA THR 39 2.114 4.506 -7.516 1.00 20.16 ATOM 628 C THR 39 2.741 3.119 -7.756 1.00 20.16 ATOM 629 O THR 39 3.627 2.979 -8.598 1.00 20.16 ATOM 630 CB THR 39 1.094 4.831 -8.622 1.00 20.16 ATOM 631 OG1 THR 39 0.544 6.137 -8.400 1.00 20.16 ATOM 632 CG2 THR 39 -0.029 3.807 -8.630 1.00 20.16 ATOM 640 N LEU 40 2.197 2.098 -6.948 1.00 21.45 ATOM 641 CA LEU 40 2.655 0.801 -7.145 1.00 21.45 ATOM 642 C LEU 40 1.460 0.065 -7.428 1.00 21.45 ATOM 643 O LEU 40 0.379 0.453 -6.990 1.00 21.45 ATOM 644 CB LEU 40 3.380 0.238 -5.916 1.00 21.45 ATOM 645 CG LEU 40 4.627 1.011 -5.466 1.00 21.45 ATOM 646 CD1 LEU 40 5.097 0.478 -4.119 1.00 21.45 ATOM 647 CD2 LEU 40 5.716 0.872 -6.520 1.00 21.45 ATOM 659 N CYS 41 1.611 -1.104 -8.214 1.00 24.28 ATOM 660 CA CYS 41 0.425 -1.819 -8.379 1.00 24.28 ATOM 661 C CYS 41 0.481 -3.412 -8.086 1.00 24.28 ATOM 662 O CYS 41 1.555 -3.932 -7.734 1.00 24.28 ATOM 663 OXT CYS 41 -0.508 -4.080 -8.210 1.00 24.28 ATOM 664 CB CYS 41 -0.040 -1.556 -9.811 1.00 24.28 ATOM 665 SG CYS 41 -0.314 0.192 -10.188 1.00 24.28 TER END