####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS381_2 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS381_2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 40 2 - 41 4.73 5.41 LCS_AVERAGE: 95.90 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 17 - 41 1.99 7.02 LCS_AVERAGE: 40.99 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 27 - 35 0.93 6.51 LCS_AVERAGE: 13.80 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 4 12 0 3 3 4 4 6 9 9 12 13 14 15 16 16 20 21 24 30 35 37 LCS_GDT Q 2 Q 2 3 4 40 0 3 3 4 4 6 9 9 12 13 17 23 25 31 33 34 34 37 38 38 LCS_GDT E 3 E 3 3 4 40 0 3 3 4 5 5 7 8 9 20 25 26 32 33 36 37 38 38 39 39 LCS_GDT T 4 T 4 3 4 40 0 3 3 4 4 5 7 8 14 19 25 28 32 33 36 37 38 38 39 39 LCS_GDT R 5 R 5 4 4 40 3 3 4 9 10 16 21 25 28 32 34 36 37 37 37 37 38 38 39 39 LCS_GDT K 6 K 6 4 4 40 3 7 17 20 22 24 27 28 31 34 35 36 37 37 37 37 38 38 39 39 LCS_GDT K 7 K 7 4 4 40 8 14 17 20 22 25 27 28 31 34 35 36 37 37 37 37 38 38 39 39 LCS_GDT C 8 C 8 4 4 40 0 7 10 17 21 23 27 28 31 34 35 36 37 37 37 37 38 38 39 39 LCS_GDT T 9 T 9 3 4 40 3 7 12 17 21 23 27 28 31 34 35 36 37 37 37 37 38 38 39 39 LCS_GDT E 10 E 10 3 4 40 3 3 9 11 16 23 25 28 31 34 35 36 37 37 37 37 38 38 39 39 LCS_GDT M 11 M 11 3 4 40 3 3 9 18 22 25 27 28 31 34 35 36 37 37 37 37 38 38 39 39 LCS_GDT K 12 K 12 3 4 40 3 5 8 13 15 20 24 28 31 34 35 36 37 37 37 37 38 38 39 39 LCS_GDT K 13 K 13 3 4 40 1 3 4 7 14 19 24 28 31 34 35 36 37 37 37 37 38 38 39 39 LCS_GDT K 14 K 14 3 4 40 0 3 4 8 13 19 24 28 31 34 35 36 37 37 37 37 38 38 39 39 LCS_GDT F 15 F 15 3 4 40 3 3 3 4 4 4 12 18 21 29 34 36 37 37 37 37 38 38 39 39 LCS_GDT K 16 K 16 3 4 40 3 3 3 4 4 9 17 24 27 33 35 36 37 37 37 37 38 38 39 39 LCS_GDT N 17 N 17 4 25 40 3 11 17 20 22 25 27 28 31 34 35 36 37 37 37 37 38 38 39 39 LCS_GDT C 18 C 18 7 25 40 3 14 17 20 22 25 27 28 31 34 35 36 37 37 37 37 38 38 39 39 LCS_GDT E 19 E 19 7 25 40 4 14 17 20 22 25 27 28 31 34 35 36 37 37 37 37 38 38 39 39 LCS_GDT V 20 V 20 7 25 40 5 11 17 20 22 25 27 28 31 34 35 36 37 37 37 37 38 38 39 39 LCS_GDT R 21 R 21 7 25 40 5 11 17 20 22 25 27 28 31 34 35 36 37 37 37 37 38 38 39 39 LCS_GDT C 22 C 22 7 25 40 3 7 13 20 22 25 27 28 31 34 35 36 37 37 37 37 38 38 39 39 LCS_GDT D 23 D 23 7 25 40 3 8 13 20 22 25 27 28 31 34 35 36 37 37 37 37 38 38 39 39 LCS_GDT E 24 E 24 7 25 40 3 6 13 20 22 25 27 28 30 34 35 36 37 37 37 37 37 38 39 39 LCS_GDT S 25 S 25 5 25 40 3 7 16 20 22 25 27 28 31 34 35 36 37 37 37 37 38 38 39 39 LCS_GDT N 26 N 26 5 25 40 3 5 7 9 19 23 27 28 31 34 35 36 37 37 37 37 38 38 39 39 LCS_GDT H 27 H 27 9 25 40 4 7 16 19 22 25 27 28 31 34 35 36 37 37 37 37 38 38 39 39 LCS_GDT C 28 C 28 9 25 40 4 11 17 20 22 25 27 28 31 34 35 36 37 37 37 37 38 38 39 39 LCS_GDT V 29 V 29 9 25 40 8 14 17 20 22 25 27 28 31 34 35 36 37 37 37 37 38 38 39 39 LCS_GDT E 30 E 30 9 25 40 8 14 17 20 22 25 27 28 31 34 35 36 37 37 37 37 38 38 39 39 LCS_GDT V 31 V 31 9 25 40 8 14 17 20 22 25 27 28 31 34 35 36 37 37 37 37 38 38 39 39 LCS_GDT R 32 R 32 9 25 40 6 14 17 20 22 25 27 28 31 34 35 36 37 37 37 37 38 38 39 39 LCS_GDT C 33 C 33 9 25 40 8 14 17 20 22 25 27 28 31 34 35 36 37 37 37 37 38 38 39 39 LCS_GDT S 34 S 34 9 25 40 3 11 17 20 22 25 27 28 31 34 35 36 37 37 37 37 38 38 39 39 LCS_GDT D 35 D 35 9 25 40 8 14 17 20 22 25 27 28 31 34 35 36 37 37 37 37 38 38 39 39 LCS_GDT T 36 T 36 6 25 40 3 8 14 19 22 25 27 28 31 34 35 36 37 37 37 37 38 38 39 39 LCS_GDT K 37 K 37 6 25 40 4 14 17 20 22 25 27 28 31 34 35 36 37 37 37 37 38 38 39 39 LCS_GDT Y 38 Y 38 6 25 40 7 14 17 20 22 25 27 28 31 34 35 36 37 37 37 37 38 38 39 39 LCS_GDT T 39 T 39 6 25 40 8 14 17 20 22 25 27 28 31 34 35 36 37 37 37 37 38 38 39 39 LCS_GDT L 40 L 40 6 25 40 8 14 17 20 22 25 27 28 31 34 35 36 37 37 37 37 38 38 39 39 LCS_GDT C 41 C 41 6 25 40 4 14 17 20 22 25 27 28 31 34 35 36 37 37 37 37 38 38 39 39 LCS_AVERAGE LCS_A: 50.23 ( 13.80 40.99 95.90 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 14 17 20 22 25 27 28 31 34 35 36 37 37 37 37 38 38 39 39 GDT PERCENT_AT 19.51 34.15 41.46 48.78 53.66 60.98 65.85 68.29 75.61 82.93 85.37 87.80 90.24 90.24 90.24 90.24 92.68 92.68 95.12 95.12 GDT RMS_LOCAL 0.37 0.65 0.88 1.15 1.36 1.66 1.85 2.01 2.66 2.97 3.13 3.32 3.43 3.43 3.43 3.43 4.06 3.82 4.18 4.18 GDT RMS_ALL_AT 7.02 6.93 7.34 7.90 6.52 7.26 6.99 6.85 5.82 6.12 6.04 5.74 5.86 5.86 5.86 5.86 5.48 5.70 5.55 5.55 # Checking swapping # possible swapping detected: E 10 E 10 # possible swapping detected: E 24 E 24 # possible swapping detected: E 30 E 30 # possible swapping detected: D 35 D 35 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 23.477 0 0.642 0.938 23.867 0.000 0.000 23.867 LGA Q 2 Q 2 19.934 0 0.591 1.158 23.888 0.000 0.000 23.888 LGA E 3 E 3 14.178 0 0.614 1.078 19.687 0.000 0.000 18.828 LGA T 4 T 4 12.907 0 0.596 0.556 14.785 0.000 0.000 14.378 LGA R 5 R 5 9.467 0 0.619 1.203 21.822 0.000 0.000 21.822 LGA K 6 K 6 3.296 0 0.044 1.132 7.904 10.000 19.798 7.904 LGA K 7 K 7 0.944 0 0.239 0.858 8.747 50.909 28.889 8.747 LGA C 8 C 8 4.955 0 0.604 0.594 8.320 8.182 5.455 8.320 LGA T 9 T 9 6.352 0 0.599 1.087 10.085 0.455 0.260 10.085 LGA E 10 E 10 4.270 0 0.381 0.948 11.042 6.818 3.030 8.682 LGA M 11 M 11 2.536 0 0.474 1.354 9.938 25.000 13.182 9.938 LGA K 12 K 12 6.590 0 0.605 0.926 17.004 1.364 0.606 17.004 LGA K 13 K 13 8.395 0 0.338 1.162 18.210 0.000 0.000 18.210 LGA K 14 K 14 8.194 0 0.536 0.993 14.191 0.000 0.000 14.191 LGA F 15 F 15 8.215 0 0.491 1.080 15.303 0.000 0.000 15.065 LGA K 16 K 16 8.114 0 0.103 1.192 15.515 0.000 0.000 15.515 LGA N 17 N 17 1.872 0 0.622 1.209 3.504 37.727 44.545 1.601 LGA C 18 C 18 1.406 0 0.044 0.114 1.805 61.818 58.182 1.805 LGA E 19 E 19 1.769 0 0.306 0.888 5.802 58.182 32.121 4.089 LGA V 20 V 20 1.441 0 0.096 1.113 4.638 61.818 46.494 2.457 LGA R 21 R 21 1.532 0 0.078 1.488 7.839 58.182 33.388 4.541 LGA C 22 C 22 2.892 0 0.016 0.692 3.772 30.000 26.364 3.772 LGA D 23 D 23 3.119 0 0.050 1.008 3.552 18.182 18.409 3.552 LGA E 24 E 24 3.374 0 0.451 0.372 6.161 21.364 10.707 5.203 LGA S 25 S 25 1.785 0 0.147 0.600 5.165 42.727 31.515 5.165 LGA N 26 N 26 5.251 0 0.272 0.936 7.463 3.182 1.591 5.346 LGA H 27 H 27 3.039 0 0.427 0.343 6.102 16.364 8.364 6.102 LGA C 28 C 28 1.831 0 0.096 0.099 3.651 45.000 34.848 3.651 LGA V 29 V 29 0.568 0 0.102 0.298 1.988 86.818 75.584 1.479 LGA E 30 E 30 0.479 0 0.080 0.311 2.231 90.909 79.192 0.815 LGA V 31 V 31 0.430 0 0.027 0.469 1.582 95.455 82.857 1.582 LGA R 32 R 32 1.088 0 0.109 1.131 5.485 65.909 34.215 5.235 LGA C 33 C 33 0.783 0 0.115 0.779 2.321 77.727 71.818 2.321 LGA S 34 S 34 2.129 0 0.103 0.632 4.083 44.545 35.152 4.083 LGA D 35 D 35 0.984 0 0.659 0.884 3.355 64.091 54.318 2.716 LGA T 36 T 36 2.795 0 0.084 1.199 6.214 45.000 26.753 6.214 LGA K 37 K 37 0.826 0 0.094 0.916 2.270 78.636 63.434 1.730 LGA Y 38 Y 38 0.901 0 0.081 1.151 7.481 90.909 48.788 7.481 LGA T 39 T 39 0.445 0 0.160 0.978 2.748 82.273 68.052 2.748 LGA L 40 L 40 0.418 0 0.168 0.623 1.847 91.364 82.955 1.847 LGA C 41 C 41 0.664 0 0.243 0.849 3.834 77.727 62.597 3.834 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 5.347 5.167 6.587 37.772 29.353 14.368 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 28 2.01 60.366 58.974 1.329 LGA_LOCAL RMSD: 2.008 Number of atoms: 28 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 6.853 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 5.347 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.708973 * X + 0.420266 * Y + -0.566333 * Z + 2.224463 Y_new = -0.653384 * X + 0.693658 * Y + -0.303197 * Z + 1.676027 Z_new = 0.265418 * X + 0.584991 * Y + 0.766380 * Z + -0.397070 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.744617 -0.268637 0.651970 [DEG: -42.6634 -15.3918 37.3551 ] ZXZ: -1.079255 0.697609 0.425937 [DEG: -61.8368 39.9701 24.4044 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS381_2 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS381_2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 28 2.01 58.974 5.35 REMARK ---------------------------------------------------------- MOLECULE T0955TS381_2 PFRMAT TS TARGET T0955 MODEL 2 PARENT N/A ATOM 1 CB SER 1 18.177 -4.167 6.248 1.00 0.00 C ATOM 2 OG SER 1 17.224 -3.456 5.473 1.00 0.00 O ATOM 4 C SER 1 17.113 -3.638 8.469 1.00 0.00 C ATOM 5 O SER 1 16.270 -2.733 8.450 1.00 0.00 O ATOM 8 N SER 1 19.531 -4.172 8.325 1.00 0.00 N ATOM 10 CA SER 1 18.389 -3.520 7.624 1.00 0.00 C ATOM 11 N GLN 2 16.995 -4.753 9.216 1.00 0.00 N ATOM 13 CA GLN 2 15.860 -5.106 10.116 1.00 0.00 C ATOM 14 CB GLN 2 15.830 -4.227 11.385 1.00 0.00 C ATOM 15 CG GLN 2 16.996 -4.450 12.342 1.00 0.00 C ATOM 16 CD GLN 2 16.920 -3.564 13.571 1.00 0.00 C ATOM 17 OE1 GLN 2 17.457 -2.456 13.585 1.00 0.00 O ATOM 18 NE2 GLN 2 16.251 -4.048 14.611 1.00 0.00 N ATOM 21 C GLN 2 14.457 -5.158 9.481 1.00 0.00 C ATOM 22 O GLN 2 14.110 -4.300 8.661 1.00 0.00 O ATOM 23 N GLU 3 13.664 -6.167 9.883 1.00 0.00 N ATOM 25 CA GLU 3 12.272 -6.445 9.426 1.00 0.00 C ATOM 26 CB GLU 3 11.266 -5.407 9.968 1.00 0.00 C ATOM 27 CG GLU 3 11.053 -5.454 11.479 1.00 0.00 C ATOM 28 CD GLU 3 10.057 -4.417 11.963 1.00 0.00 C ATOM 29 OE1 GLU 3 10.481 -3.289 12.292 1.00 0.00 O ATOM 30 OE2 GLU 3 8.849 -4.731 12.019 1.00 0.00 O ATOM 31 C GLU 3 12.062 -6.638 7.910 1.00 0.00 C ATOM 32 O GLU 3 12.650 -5.909 7.100 1.00 0.00 O ATOM 33 N THR 4 11.223 -7.621 7.552 1.00 0.00 N ATOM 35 CA THR 4 10.889 -7.965 6.154 1.00 0.00 C ATOM 36 CB THR 4 10.950 -9.533 5.904 1.00 0.00 C ATOM 37 OG1 THR 4 10.523 -9.838 4.570 1.00 0.00 O ATOM 39 CG2 THR 4 10.103 -10.328 6.924 1.00 0.00 C ATOM 40 C THR 4 9.539 -7.360 5.697 1.00 0.00 C ATOM 41 O THR 4 8.598 -7.266 6.498 1.00 0.00 O ATOM 42 N ARG 5 9.474 -6.948 4.423 1.00 0.00 N ATOM 44 CA ARG 5 8.276 -6.346 3.805 1.00 0.00 C ATOM 45 CB ARG 5 8.626 -5.027 3.074 1.00 0.00 C ATOM 46 CG ARG 5 9.861 -5.042 2.146 1.00 0.00 C ATOM 47 CD ARG 5 10.078 -3.686 1.492 1.00 0.00 C ATOM 48 NE ARG 5 11.246 -3.683 0.607 1.00 0.00 N ATOM 50 CZ ARG 5 11.666 -2.637 -0.106 1.00 0.00 C ATOM 51 NH1 ARG 5 11.025 -1.472 -0.064 1.00 0.00 N ATOM 54 NH2 ARG 5 12.741 -2.757 -0.873 1.00 0.00 N ATOM 57 C ARG 5 7.508 -7.311 2.879 1.00 0.00 C ATOM 58 O ARG 5 8.127 -8.095 2.149 1.00 0.00 O ATOM 59 N LYS 6 6.170 -7.238 2.926 1.00 0.00 N ATOM 61 CA LYS 6 5.266 -8.078 2.115 1.00 0.00 C ATOM 62 CB LYS 6 4.202 -8.775 3.000 1.00 0.00 C ATOM 63 CG LYS 6 3.470 -7.901 4.043 1.00 0.00 C ATOM 64 CD LYS 6 2.456 -8.719 4.836 1.00 0.00 C ATOM 65 CE LYS 6 1.719 -7.875 5.874 1.00 0.00 C ATOM 66 NZ LYS 6 0.794 -6.866 5.276 1.00 0.00 N ATOM 70 C LYS 6 4.608 -7.319 0.943 1.00 0.00 C ATOM 71 O LYS 6 4.517 -7.856 -0.167 1.00 0.00 O ATOM 72 N LYS 7 4.160 -6.084 1.212 1.00 0.00 N ATOM 74 CA LYS 7 3.504 -5.206 0.222 1.00 0.00 C ATOM 75 CB LYS 7 2.129 -4.733 0.739 1.00 0.00 C ATOM 76 CG LYS 7 1.117 -5.845 1.005 1.00 0.00 C ATOM 77 CD LYS 7 -0.170 -5.287 1.607 1.00 0.00 C ATOM 78 CE LYS 7 -1.138 -6.392 2.024 1.00 0.00 C ATOM 79 NZ LYS 7 -1.720 -7.147 0.875 1.00 0.00 N ATOM 83 C LYS 7 4.412 -4.002 -0.111 1.00 0.00 C ATOM 84 O LYS 7 5.092 -4.015 -1.144 1.00 0.00 O ATOM 85 N CYS 8 4.411 -2.982 0.764 1.00 0.00 N ATOM 87 CA CYS 8 5.221 -1.754 0.637 1.00 0.00 C ATOM 88 CB CYS 8 4.388 -0.588 0.065 1.00 0.00 C ATOM 89 SG CYS 8 5.326 0.921 -0.292 1.00 0.00 S ATOM 90 C CYS 8 5.714 -1.397 2.047 1.00 0.00 C ATOM 91 O CYS 8 5.029 -1.704 3.033 1.00 0.00 O ATOM 92 N THR 9 6.889 -0.757 2.135 1.00 0.00 N ATOM 94 CA THR 9 7.504 -0.338 3.414 1.00 0.00 C ATOM 95 CB THR 9 9.092 -0.393 3.353 1.00 0.00 C ATOM 96 OG1 THR 9 9.649 0.110 4.574 1.00 0.00 O ATOM 98 CG2 THR 9 9.662 0.392 2.151 1.00 0.00 C ATOM 99 C THR 9 6.970 1.032 3.903 1.00 0.00 C ATOM 100 O THR 9 7.070 2.034 3.178 1.00 0.00 O ATOM 101 N GLU 10 6.389 1.040 5.118 1.00 0.00 N ATOM 103 CA GLU 10 5.778 2.213 5.810 1.00 0.00 C ATOM 104 CB GLU 10 6.783 2.906 6.789 1.00 0.00 C ATOM 105 CG GLU 10 8.157 3.386 6.237 1.00 0.00 C ATOM 106 CD GLU 10 8.165 4.850 5.811 1.00 0.00 C ATOM 107 OE1 GLU 10 7.931 5.124 4.615 1.00 0.00 O ATOM 108 OE2 GLU 10 8.407 5.721 6.673 1.00 0.00 O ATOM 109 C GLU 10 5.003 3.226 4.919 1.00 0.00 C ATOM 110 O GLU 10 4.965 4.434 5.200 1.00 0.00 O ATOM 111 N MET 11 4.367 2.687 3.863 1.00 0.00 N ATOM 113 CA MET 11 3.569 3.411 2.834 1.00 0.00 C ATOM 114 CG MET 11 1.256 2.879 3.879 1.00 0.00 C ATOM 115 SD MET 11 -0.256 3.575 4.581 1.00 0.00 S ATOM 116 CE MET 11 0.065 3.406 6.344 1.00 0.00 C ATOM 117 C MET 11 4.358 4.518 2.098 1.00 0.00 C ATOM 118 O MET 11 4.126 5.717 2.311 1.00 0.00 O ATOM 119 CB MET 11 2.230 3.949 3.394 1.00 0.00 C ATOM 120 N LYS 12 5.331 4.086 1.273 1.00 0.00 N ATOM 122 CA LYS 12 6.236 4.931 0.446 1.00 0.00 C ATOM 123 CB LYS 12 5.469 5.530 -0.761 1.00 0.00 C ATOM 124 CG LYS 12 6.305 5.758 -2.030 1.00 0.00 C ATOM 125 CD LYS 12 5.464 6.329 -3.164 1.00 0.00 C ATOM 126 CE LYS 12 6.312 6.684 -4.384 1.00 0.00 C ATOM 127 NZ LYS 12 6.951 5.503 -5.041 1.00 0.00 N ATOM 131 C LYS 12 7.018 6.021 1.240 1.00 0.00 C ATOM 132 O LYS 12 6.763 6.217 2.435 1.00 0.00 O ATOM 133 N LYS 13 7.965 6.694 0.571 1.00 0.00 N ATOM 135 CA LYS 13 8.799 7.756 1.170 1.00 0.00 C ATOM 136 CB LYS 13 10.254 7.681 0.634 1.00 0.00 C ATOM 137 CG LYS 13 10.432 7.563 -0.894 1.00 0.00 C ATOM 138 CD LYS 13 11.906 7.500 -1.277 1.00 0.00 C ATOM 139 CE LYS 13 12.106 7.384 -2.787 1.00 0.00 C ATOM 140 NZ LYS 13 11.720 8.616 -3.537 1.00 0.00 N ATOM 144 C LYS 13 8.182 9.180 1.085 1.00 0.00 C ATOM 145 O LYS 13 7.117 9.407 1.672 1.00 0.00 O ATOM 146 N LYS 14 8.828 10.103 0.344 1.00 0.00 N ATOM 148 CA LYS 14 8.426 11.524 0.123 1.00 0.00 C ATOM 149 CB LYS 14 7.707 11.710 -1.247 1.00 0.00 C ATOM 150 CG LYS 14 6.510 10.793 -1.565 1.00 0.00 C ATOM 151 CD LYS 14 5.988 11.044 -2.969 1.00 0.00 C ATOM 152 CE LYS 14 4.872 10.077 -3.327 1.00 0.00 C ATOM 153 NZ LYS 14 4.353 10.313 -4.702 1.00 0.00 N ATOM 157 C LYS 14 7.737 12.325 1.272 1.00 0.00 C ATOM 158 O LYS 14 7.753 11.879 2.426 1.00 0.00 O ATOM 159 N PHE 15 7.180 13.502 0.948 1.00 0.00 N ATOM 161 CA PHE 15 6.497 14.390 1.908 1.00 0.00 C ATOM 162 CB PHE 15 6.881 15.869 1.613 1.00 0.00 C ATOM 163 CG PHE 15 6.838 16.804 2.828 1.00 0.00 C ATOM 164 CD1 PHE 15 5.662 17.528 3.144 1.00 0.00 C ATOM 165 CD2 PHE 15 7.984 16.995 3.636 1.00 0.00 C ATOM 166 CE1 PHE 15 5.627 18.426 4.246 1.00 0.00 C ATOM 167 CE2 PHE 15 7.964 17.890 4.742 1.00 0.00 C ATOM 168 CZ PHE 15 6.780 18.608 5.047 1.00 0.00 C ATOM 169 C PHE 15 4.964 14.201 1.857 1.00 0.00 C ATOM 170 O PHE 15 4.450 13.587 0.915 1.00 0.00 O ATOM 171 N LYS 16 4.260 14.730 2.877 1.00 0.00 N ATOM 173 CA LYS 16 2.782 14.684 3.061 1.00 0.00 C ATOM 174 CB LYS 16 2.032 15.455 1.948 1.00 0.00 C ATOM 175 CG LYS 16 2.213 16.968 2.000 1.00 0.00 C ATOM 176 CD LYS 16 1.411 17.664 0.914 1.00 0.00 C ATOM 177 CE LYS 16 1.596 19.171 0.970 1.00 0.00 C ATOM 178 NZ LYS 16 0.815 19.866 -0.090 1.00 0.00 N ATOM 182 C LYS 16 2.166 13.282 3.282 1.00 0.00 C ATOM 183 O LYS 16 0.945 13.151 3.466 1.00 0.00 O ATOM 184 N ASN 17 3.033 12.253 3.317 1.00 0.00 N ATOM 186 CA ASN 17 2.699 10.815 3.523 1.00 0.00 C ATOM 187 CB ASN 17 2.231 10.528 4.957 1.00 0.00 C ATOM 188 CG ASN 17 3.316 10.780 5.998 1.00 0.00 C ATOM 189 OD1 ASN 17 3.436 11.883 6.534 1.00 0.00 O ATOM 190 ND2 ASN 17 4.100 9.749 6.302 1.00 0.00 N ATOM 193 C ASN 17 1.702 10.154 2.572 1.00 0.00 C ATOM 194 O ASN 17 0.812 10.824 2.040 1.00 0.00 O ATOM 195 N CYS 18 1.822 8.825 2.442 1.00 0.00 N ATOM 197 CA CYS 18 0.960 8.003 1.590 1.00 0.00 C ATOM 198 CB CYS 18 1.801 7.135 0.656 1.00 0.00 C ATOM 199 SG CYS 18 3.145 8.014 -0.169 1.00 0.00 S ATOM 200 C CYS 18 0.025 7.106 2.410 1.00 0.00 C ATOM 201 O CYS 18 0.399 6.628 3.489 1.00 0.00 O ATOM 202 N GLU 19 -1.195 6.916 1.891 1.00 0.00 N ATOM 204 CA GLU 19 -2.243 6.066 2.485 1.00 0.00 C ATOM 205 CB GLU 19 -3.590 6.804 2.542 1.00 0.00 C ATOM 206 CG GLU 19 -3.637 7.972 3.524 1.00 0.00 C ATOM 207 CD GLU 19 -4.986 8.669 3.543 1.00 0.00 C ATOM 208 OE1 GLU 19 -5.856 8.263 4.343 1.00 0.00 O ATOM 209 OE2 GLU 19 -5.176 9.623 2.760 1.00 0.00 O ATOM 210 C GLU 19 -2.346 4.862 1.543 1.00 0.00 C ATOM 211 O GLU 19 -2.195 5.034 0.325 1.00 0.00 O ATOM 212 N VAL 20 -2.599 3.666 2.095 1.00 0.00 N ATOM 214 CA VAL 20 -2.692 2.430 1.299 1.00 0.00 C ATOM 215 CB VAL 20 -1.617 1.329 1.762 1.00 0.00 C ATOM 216 CG1 VAL 20 -1.852 0.867 3.214 1.00 0.00 C ATOM 217 CG2 VAL 20 -1.559 0.139 0.791 1.00 0.00 C ATOM 218 C VAL 20 -4.118 1.853 1.176 1.00 0.00 C ATOM 219 O VAL 20 -4.878 1.817 2.152 1.00 0.00 O ATOM 220 N ARG 21 -4.454 1.465 -0.062 1.00 0.00 N ATOM 222 CA ARG 21 -5.736 0.858 -0.450 1.00 0.00 C ATOM 223 CB ARG 21 -6.515 1.764 -1.417 1.00 0.00 C ATOM 224 CG ARG 21 -7.167 2.977 -0.771 1.00 0.00 C ATOM 225 CD ARG 21 -8.011 3.742 -1.781 1.00 0.00 C ATOM 226 NE ARG 21 -8.725 4.866 -1.169 1.00 0.00 N ATOM 228 CZ ARG 21 -9.543 5.698 -1.814 1.00 0.00 C ATOM 229 NH1 ARG 21 -10.133 6.681 -1.149 1.00 0.00 N ATOM 232 NH2 ARG 21 -9.779 5.561 -3.116 1.00 0.00 N ATOM 235 C ARG 21 -5.391 -0.467 -1.143 1.00 0.00 C ATOM 236 O ARG 21 -4.416 -0.523 -1.911 1.00 0.00 O ATOM 237 N CYS 22 -6.143 -1.526 -0.811 1.00 0.00 N ATOM 239 CA CYS 22 -5.966 -2.883 -1.366 1.00 0.00 C ATOM 240 CB CYS 22 -5.230 -3.791 -0.365 1.00 0.00 C ATOM 241 SG CYS 22 -5.984 -3.886 1.279 1.00 0.00 S ATOM 242 C CYS 22 -7.310 -3.522 -1.743 1.00 0.00 C ATOM 243 O CYS 22 -8.331 -3.245 -1.100 1.00 0.00 O ATOM 244 N ASP 23 -7.292 -4.361 -2.789 1.00 0.00 N ATOM 246 CA ASP 23 -8.475 -5.086 -3.295 1.00 0.00 C ATOM 247 CB ASP 23 -8.713 -4.792 -4.801 1.00 0.00 C ATOM 248 CG ASP 23 -7.447 -4.922 -5.658 1.00 0.00 C ATOM 249 OD1 ASP 23 -6.715 -3.919 -5.806 1.00 0.00 O ATOM 250 OD2 ASP 23 -7.199 -6.025 -6.191 1.00 0.00 O ATOM 251 C ASP 23 -8.359 -6.600 -3.017 1.00 0.00 C ATOM 252 O ASP 23 -7.273 -7.075 -2.663 1.00 0.00 O ATOM 253 N GLU 24 -9.469 -7.335 -3.179 1.00 0.00 N ATOM 255 CA GLU 24 -9.535 -8.793 -2.945 1.00 0.00 C ATOM 256 CB GLU 24 -10.927 -9.196 -2.391 1.00 0.00 C ATOM 257 CG GLU 24 -12.162 -8.671 -3.155 1.00 0.00 C ATOM 258 CD GLU 24 -13.469 -9.122 -2.533 1.00 0.00 C ATOM 259 OE1 GLU 24 -13.974 -10.197 -2.919 1.00 0.00 O ATOM 260 OE2 GLU 24 -13.993 -8.401 -1.657 1.00 0.00 O ATOM 261 C GLU 24 -9.084 -9.685 -4.135 1.00 0.00 C ATOM 262 O GLU 24 -9.890 -10.429 -4.717 1.00 0.00 O ATOM 263 N SER 25 -7.796 -9.570 -4.492 1.00 0.00 N ATOM 265 CA SER 25 -7.169 -10.337 -5.586 1.00 0.00 C ATOM 266 CB SER 25 -6.723 -9.403 -6.728 1.00 0.00 C ATOM 267 OG SER 25 -5.859 -8.381 -6.256 1.00 0.00 O ATOM 269 C SER 25 -5.990 -11.184 -5.065 1.00 0.00 C ATOM 270 O SER 25 -6.117 -12.411 -4.963 1.00 0.00 O ATOM 271 N ASN 26 -4.862 -10.528 -4.743 1.00 0.00 N ATOM 273 CA ASN 26 -3.639 -11.176 -4.221 1.00 0.00 C ATOM 274 CB ASN 26 -2.585 -11.412 -5.341 1.00 0.00 C ATOM 275 CG ASN 26 -2.382 -10.197 -6.254 1.00 0.00 C ATOM 276 OD1 ASN 26 -3.071 -10.042 -7.264 1.00 0.00 O ATOM 277 ND2 ASN 26 -1.425 -9.343 -5.904 1.00 0.00 N ATOM 280 C ASN 26 -3.035 -10.422 -3.014 1.00 0.00 C ATOM 281 O ASN 26 -3.137 -10.904 -1.879 1.00 0.00 O ATOM 282 N HIS 27 -2.417 -9.257 -3.270 1.00 0.00 N ATOM 284 CA HIS 27 -1.788 -8.401 -2.243 1.00 0.00 C ATOM 285 CG HIS 27 0.312 -9.844 -1.971 1.00 0.00 C ATOM 286 CD2 HIS 27 0.963 -10.755 -2.733 1.00 0.00 C ATOM 287 ND1 HIS 27 0.243 -10.388 -0.705 1.00 0.00 N ATOM 289 CE1 HIS 27 0.826 -11.573 -0.701 1.00 0.00 C ATOM 290 NE2 HIS 27 1.272 -11.820 -1.920 1.00 0.00 N ATOM 292 C HIS 27 -2.234 -6.942 -2.426 1.00 0.00 C ATOM 293 O HIS 27 -2.764 -6.337 -1.489 1.00 0.00 O ATOM 294 CB HIS 27 -0.244 -8.489 -2.306 1.00 0.00 C ATOM 295 N CYS 28 -2.037 -6.408 -3.647 1.00 0.00 N ATOM 297 CA CYS 28 -2.375 -5.028 -4.089 1.00 0.00 C ATOM 298 CB CYS 28 -3.845 -4.919 -4.527 1.00 0.00 C ATOM 299 SG CYS 28 -4.256 -5.932 -5.965 1.00 0.00 S ATOM 300 C CYS 28 -2.026 -3.836 -3.182 1.00 0.00 C ATOM 301 O CYS 28 -2.445 -3.787 -2.017 1.00 0.00 O ATOM 302 N VAL 29 -1.226 -2.906 -3.723 1.00 0.00 N ATOM 304 CA VAL 29 -0.810 -1.678 -3.022 1.00 0.00 C ATOM 305 CB VAL 29 0.747 -1.585 -2.745 1.00 0.00 C ATOM 306 CG1 VAL 29 1.055 -0.604 -1.601 1.00 0.00 C ATOM 307 CG2 VAL 29 1.337 -2.958 -2.423 1.00 0.00 C ATOM 308 C VAL 29 -1.199 -0.485 -3.904 1.00 0.00 C ATOM 309 O VAL 29 -0.977 -0.501 -5.125 1.00 0.00 O ATOM 310 N GLU 30 -1.867 0.489 -3.279 1.00 0.00 N ATOM 312 CA GLU 30 -2.271 1.750 -3.909 1.00 0.00 C ATOM 313 CB GLU 30 -3.801 1.849 -4.033 1.00 0.00 C ATOM 314 CG GLU 30 -4.308 2.732 -5.182 1.00 0.00 C ATOM 315 CD GLU 30 -5.822 2.789 -5.253 1.00 0.00 C ATOM 316 OE1 GLU 30 -6.415 3.686 -4.619 1.00 0.00 O ATOM 317 OE2 GLU 30 -6.418 1.937 -5.946 1.00 0.00 O ATOM 318 C GLU 30 -1.754 2.755 -2.876 1.00 0.00 C ATOM 319 O GLU 30 -2.034 2.602 -1.683 1.00 0.00 O ATOM 320 N VAL 31 -0.975 3.741 -3.335 1.00 0.00 N ATOM 322 CA VAL 31 -0.401 4.786 -2.477 1.00 0.00 C ATOM 323 CB VAL 31 1.187 4.832 -2.616 1.00 0.00 C ATOM 324 CG1 VAL 31 1.748 6.255 -2.763 1.00 0.00 C ATOM 325 CG2 VAL 31 1.830 4.111 -1.444 1.00 0.00 C ATOM 326 C VAL 31 -1.095 6.100 -2.853 1.00 0.00 C ATOM 327 O VAL 31 -1.153 6.453 -4.035 1.00 0.00 O ATOM 328 N ARG 32 -1.636 6.780 -1.835 1.00 0.00 N ATOM 330 CA ARG 32 -2.341 8.066 -1.956 1.00 0.00 C ATOM 331 CB ARG 32 -3.774 7.970 -1.406 1.00 0.00 C ATOM 332 CG ARG 32 -4.713 7.041 -2.176 1.00 0.00 C ATOM 333 CD ARG 32 -6.116 7.021 -1.569 1.00 0.00 C ATOM 334 NE ARG 32 -6.149 6.410 -0.235 1.00 0.00 N ATOM 336 CZ ARG 32 -7.042 6.688 0.716 1.00 0.00 C ATOM 337 NH1 ARG 32 -6.967 6.066 1.885 1.00 0.00 N ATOM 340 NH2 ARG 32 -8.008 7.579 0.513 1.00 0.00 N ATOM 343 C ARG 32 -1.533 9.036 -1.096 1.00 0.00 C ATOM 344 O ARG 32 -1.611 8.971 0.136 1.00 0.00 O ATOM 345 N CYS 33 -0.716 9.873 -1.748 1.00 0.00 N ATOM 347 CA CYS 33 0.143 10.853 -1.069 1.00 0.00 C ATOM 348 CB CYS 33 1.598 10.713 -1.557 1.00 0.00 C ATOM 349 SG CYS 33 2.818 11.697 -0.648 1.00 0.00 S ATOM 350 C CYS 33 -0.366 12.304 -1.185 1.00 0.00 C ATOM 351 O CYS 33 -1.236 12.709 -0.403 1.00 0.00 O ATOM 352 N SER 34 0.171 13.065 -2.149 1.00 0.00 N ATOM 354 CA SER 34 -0.190 14.468 -2.388 1.00 0.00 C ATOM 355 CB SER 34 1.008 15.378 -2.068 1.00 0.00 C ATOM 356 OG SER 34 2.170 14.983 -2.778 1.00 0.00 O ATOM 358 C SER 34 -0.668 14.666 -3.837 1.00 0.00 C ATOM 359 O SER 34 -1.711 15.291 -4.063 1.00 0.00 O ATOM 360 N ASP 35 0.103 14.131 -4.797 1.00 0.00 N ATOM 362 CA ASP 35 -0.191 14.198 -6.242 1.00 0.00 C ATOM 363 CB ASP 35 0.761 15.194 -6.949 1.00 0.00 C ATOM 364 CG ASP 35 0.180 15.763 -8.245 1.00 0.00 C ATOM 365 OD1 ASP 35 0.405 15.163 -9.320 1.00 0.00 O ATOM 366 OD2 ASP 35 -0.489 16.818 -8.190 1.00 0.00 O ATOM 367 C ASP 35 0.002 12.776 -6.801 1.00 0.00 C ATOM 368 O ASP 35 0.977 12.102 -6.444 1.00 0.00 O ATOM 369 N THR 36 -0.923 12.350 -7.686 1.00 0.00 N ATOM 371 CA THR 36 -0.984 11.020 -8.371 1.00 0.00 C ATOM 372 CB THR 36 -0.295 11.036 -9.816 1.00 0.00 C ATOM 373 OG1 THR 36 -0.449 9.758 -10.449 1.00 0.00 O ATOM 375 CG2 THR 36 1.203 11.405 -9.757 1.00 0.00 C ATOM 376 C THR 36 -0.614 9.742 -7.563 1.00 0.00 C ATOM 377 O THR 36 0.379 9.736 -6.827 1.00 0.00 O ATOM 378 N LYS 37 -1.403 8.672 -7.741 1.00 0.00 N ATOM 380 CA LYS 37 -1.199 7.385 -7.044 1.00 0.00 C ATOM 381 CB LYS 37 -2.524 6.597 -6.879 1.00 0.00 C ATOM 382 CG LYS 37 -3.424 6.475 -8.127 1.00 0.00 C ATOM 383 CD LYS 37 -4.688 5.679 -7.822 1.00 0.00 C ATOM 384 CE LYS 37 -5.595 5.545 -9.044 1.00 0.00 C ATOM 385 NZ LYS 37 -5.024 4.681 -10.120 1.00 0.00 N ATOM 389 C LYS 37 -0.100 6.453 -7.583 1.00 0.00 C ATOM 390 O LYS 37 0.080 6.340 -8.802 1.00 0.00 O ATOM 391 N TYR 38 0.619 5.811 -6.653 1.00 0.00 N ATOM 393 CA TYR 38 1.688 4.848 -6.959 1.00 0.00 C ATOM 394 CB TYR 38 2.960 5.143 -6.113 1.00 0.00 C ATOM 395 CG TYR 38 4.281 4.529 -6.606 1.00 0.00 C ATOM 396 CD1 TYR 38 5.099 5.206 -7.546 1.00 0.00 C ATOM 397 CE1 TYR 38 6.334 4.652 -7.985 1.00 0.00 C ATOM 398 CD2 TYR 38 4.734 3.280 -6.114 1.00 0.00 C ATOM 399 CE2 TYR 38 5.968 2.720 -6.547 1.00 0.00 C ATOM 400 CZ TYR 38 6.757 3.413 -7.480 1.00 0.00 C ATOM 401 OH TYR 38 7.952 2.875 -7.903 1.00 0.00 O ATOM 403 C TYR 38 1.101 3.472 -6.607 1.00 0.00 C ATOM 404 O TYR 38 0.532 3.302 -5.518 1.00 0.00 O ATOM 405 N THR 39 1.189 2.532 -7.558 1.00 0.00 N ATOM 407 CA THR 39 0.681 1.157 -7.411 1.00 0.00 C ATOM 408 CB THR 39 -0.387 0.806 -8.502 1.00 0.00 C ATOM 409 OG1 THR 39 0.112 1.156 -9.800 1.00 0.00 O ATOM 411 CG2 THR 39 -1.691 1.549 -8.241 1.00 0.00 C ATOM 412 C THR 39 1.828 0.140 -7.472 1.00 0.00 C ATOM 413 O THR 39 2.804 0.356 -8.200 1.00 0.00 O ATOM 414 N LEU 40 1.739 -0.904 -6.634 1.00 0.00 N ATOM 416 CA LEU 40 2.729 -1.997 -6.555 1.00 0.00 C ATOM 417 CB LEU 40 3.571 -1.909 -5.262 1.00 0.00 C ATOM 418 CG LEU 40 4.580 -0.768 -5.038 1.00 0.00 C ATOM 419 CD1 LEU 40 4.384 -0.180 -3.647 1.00 0.00 C ATOM 420 CD2 LEU 40 6.028 -1.247 -5.217 1.00 0.00 C ATOM 421 C LEU 40 2.005 -3.348 -6.611 1.00 0.00 C ATOM 422 O LEU 40 0.876 -3.466 -6.114 1.00 0.00 O ATOM 423 N CYS 41 2.663 -4.350 -7.213 1.00 0.00 N ATOM 425 CA CYS 41 2.132 -5.718 -7.364 1.00 0.00 C ATOM 426 CB CYS 41 2.248 -6.175 -8.826 1.00 0.00 C ATOM 427 SG CYS 41 1.434 -7.750 -9.210 1.00 0.00 S ATOM 428 C CYS 41 2.873 -6.695 -6.445 1.00 0.00 C ATOM 429 O CYS 41 2.233 -7.661 -5.974 1.00 0.00 O ATOM 430 OXT CYS 41 4.078 -6.476 -6.200 1.00 0.00 O TER END