####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS344_5 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS344_5.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 1.46 1.46 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 1.46 1.46 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 17 - 41 0.99 1.73 LCS_AVERAGE: 52.47 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 41 41 3 3 5 11 17 32 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Q 2 Q 2 16 41 41 9 18 29 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 3 E 3 17 41 41 9 22 34 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 4 T 4 17 41 41 9 23 34 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 5 R 5 17 41 41 9 23 34 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 6 K 6 17 41 41 12 23 34 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 7 K 7 17 41 41 12 23 34 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 8 C 8 17 41 41 12 23 34 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 9 T 9 17 41 41 12 23 34 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 10 E 10 17 41 41 12 23 34 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT M 11 M 11 17 41 41 12 23 34 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 12 K 12 17 41 41 12 23 34 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 13 K 13 17 41 41 12 23 34 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 14 K 14 17 41 41 12 23 34 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT F 15 F 15 17 41 41 9 23 33 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 16 K 16 17 41 41 3 3 22 29 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 17 N 17 25 41 41 9 23 34 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 18 C 18 25 41 41 9 23 34 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 19 E 19 25 41 41 6 23 34 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 20 V 20 25 41 41 4 23 34 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 21 R 21 25 41 41 5 23 34 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 22 C 22 25 41 41 4 22 34 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 23 D 23 25 41 41 4 15 29 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 24 E 24 25 41 41 9 23 34 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 25 S 25 25 41 41 9 23 34 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 26 N 26 25 41 41 9 23 34 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT H 27 H 27 25 41 41 12 23 34 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 28 C 28 25 41 41 12 23 34 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 29 V 29 25 41 41 12 23 34 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 30 E 30 25 41 41 9 23 34 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 31 V 31 25 41 41 9 23 34 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 32 R 32 25 41 41 9 23 34 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 33 C 33 25 41 41 6 23 34 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 34 S 34 25 41 41 4 4 5 30 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 35 D 35 25 41 41 4 22 34 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 36 T 36 25 41 41 8 22 33 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 37 K 37 25 41 41 9 23 34 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Y 38 Y 38 25 41 41 3 23 34 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 39 T 39 25 41 41 4 11 34 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT L 40 L 40 25 41 41 9 23 34 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 41 C 41 25 41 41 5 23 34 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_AVERAGE LCS_A: 84.16 ( 52.47 100.00 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 12 23 34 38 39 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 GDT PERCENT_AT 29.27 56.10 82.93 92.68 95.12 97.56 97.56 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.33 0.66 0.98 1.11 1.18 1.26 1.26 1.46 1.46 1.46 1.46 1.46 1.46 1.46 1.46 1.46 1.46 1.46 1.46 1.46 GDT RMS_ALL_AT 1.72 1.56 1.53 1.51 1.49 1.48 1.48 1.46 1.46 1.46 1.46 1.46 1.46 1.46 1.46 1.46 1.46 1.46 1.46 1.46 # Checking swapping # possible swapping detected: E 3 E 3 # possible swapping detected: E 19 E 19 # possible swapping detected: D 23 D 23 # possible swapping detected: E 24 E 24 # possible swapping detected: E 30 E 30 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 4.693 0 0.187 0.793 7.187 1.818 1.212 6.372 LGA Q 2 Q 2 1.772 0 0.197 0.960 2.968 59.091 53.535 1.668 LGA E 3 E 3 1.191 0 0.045 1.106 4.580 73.636 51.515 2.268 LGA T 4 T 4 0.633 0 0.033 1.126 2.373 90.909 74.545 2.306 LGA R 5 R 5 0.522 0 0.018 0.194 2.736 90.909 65.455 2.736 LGA K 6 K 6 0.451 0 0.021 1.250 6.320 95.455 58.990 6.279 LGA K 7 K 7 0.447 0 0.032 0.670 3.020 95.455 65.859 3.020 LGA C 8 C 8 0.605 0 0.032 0.756 2.779 86.364 75.758 2.779 LGA T 9 T 9 1.074 0 0.021 0.101 1.594 69.545 65.714 1.124 LGA E 10 E 10 1.186 0 0.017 0.489 1.850 65.455 62.222 1.547 LGA M 11 M 11 0.976 0 0.062 0.120 1.045 77.727 79.773 0.761 LGA K 12 K 12 1.155 0 0.048 0.622 2.096 61.818 54.545 2.096 LGA K 13 K 13 1.176 0 0.038 0.582 2.074 65.455 66.061 0.855 LGA K 14 K 14 0.956 0 0.064 0.578 2.316 73.636 75.354 2.316 LGA F 15 F 15 1.400 0 0.115 0.258 2.624 61.818 53.388 2.556 LGA K 16 K 16 2.859 0 0.645 1.085 4.513 28.636 22.828 4.513 LGA N 17 N 17 1.517 0 0.201 0.516 3.459 62.273 45.000 3.459 LGA C 18 C 18 1.398 0 0.028 0.865 4.267 65.455 55.455 4.267 LGA E 19 E 19 1.480 0 0.190 0.379 2.864 69.545 53.737 2.254 LGA V 20 V 20 1.440 0 0.049 0.065 1.718 58.182 55.065 1.648 LGA R 21 R 21 1.372 0 0.051 1.235 5.327 69.545 39.339 5.216 LGA C 22 C 22 1.744 0 0.189 0.961 4.891 47.727 40.606 4.891 LGA D 23 D 23 2.037 0 0.313 1.112 4.954 36.364 28.409 3.737 LGA E 24 E 24 0.380 0 0.156 0.564 2.344 90.909 68.485 2.260 LGA S 25 S 25 1.337 0 0.021 0.643 3.029 65.909 55.455 3.029 LGA N 26 N 26 1.268 0 0.140 1.188 5.775 73.636 45.909 5.775 LGA H 27 H 27 0.571 0 0.066 0.264 1.516 90.909 82.545 1.421 LGA C 28 C 28 0.353 0 0.071 0.091 1.014 86.818 91.212 0.429 LGA V 29 V 29 0.388 0 0.024 0.072 1.321 95.455 84.935 1.018 LGA E 30 E 30 0.527 0 0.127 0.611 2.654 90.909 74.343 2.654 LGA V 31 V 31 0.435 0 0.117 0.161 0.544 90.909 94.805 0.394 LGA R 32 R 32 0.876 0 0.145 0.983 7.474 74.091 41.488 7.474 LGA C 33 C 33 0.678 0 0.514 0.953 3.589 60.000 59.394 1.476 LGA S 34 S 34 2.391 0 0.312 0.600 3.711 41.818 32.727 3.711 LGA D 35 D 35 1.587 0 0.239 0.950 4.987 54.545 35.909 4.987 LGA T 36 T 36 1.946 0 0.266 1.133 3.879 58.182 45.714 3.879 LGA K 37 K 37 0.265 0 0.104 1.285 3.535 78.636 62.424 3.535 LGA Y 38 Y 38 1.513 0 0.020 1.363 5.099 74.545 43.636 5.099 LGA T 39 T 39 1.449 0 0.174 1.071 3.927 48.636 40.519 3.927 LGA L 40 L 40 0.711 0 0.090 0.986 4.247 86.364 60.909 4.247 LGA C 41 C 41 1.298 0 0.208 0.865 3.378 65.455 56.623 3.378 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 1.460 1.563 2.225 69.135 56.620 30.732 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 41 1.46 87.195 94.138 2.628 LGA_LOCAL RMSD: 1.460 Number of atoms: 41 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 1.460 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 1.460 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.962034 * X + 0.123675 * Y + -0.243300 * Z + -1.753079 Y_new = 0.144995 * X + -0.523645 * Y + -0.839507 * Z + 1.644900 Z_new = -0.231229 * X + -0.842912 * Y + 0.485832 * Z + 5.427310 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.992002 0.233341 -1.047930 [DEG: 171.4291 13.3694 -60.0420 ] ZXZ: -0.282084 1.063481 -2.873857 [DEG: -16.1622 60.9330 -164.6599 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS344_5 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS344_5.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 41 1.46 94.138 1.46 REMARK ---------------------------------------------------------- MOLECULE T0955TS344_5 PFRMAT TS TARGET T0955 MODEL 5 PARENT N/A ATOM 1 N SER 1 -4.984 -12.180 0.886 1.00 1.22 N ATOM 2 CA SER 1 -3.591 -12.126 0.460 1.00 1.22 C ATOM 3 C SER 1 -2.707 -11.438 1.478 1.00 1.22 C ATOM 4 O SER 1 -2.579 -10.206 1.483 1.00 1.22 O ATOM 5 CB SER 1 -3.483 -11.407 -0.871 1.00 1.22 C ATOM 6 OG SER 1 -2.148 -11.322 -1.289 1.00 1.22 O ATOM 14 N GLN 2 -2.065 -12.237 2.328 1.00 1.10 N ATOM 15 CA GLN 2 -1.215 -11.661 3.355 1.00 1.10 C ATOM 16 C GLN 2 -0.009 -10.974 2.742 1.00 1.10 C ATOM 17 O GLN 2 0.483 -9.986 3.290 1.00 1.10 O ATOM 18 CB GLN 2 -0.795 -12.699 4.391 1.00 1.10 C ATOM 19 CG GLN 2 -0.042 -12.102 5.591 1.00 1.10 C ATOM 20 CD GLN 2 -0.919 -11.099 6.391 1.00 1.10 C ATOM 21 OE1 GLN 2 -2.112 -11.357 6.648 1.00 1.10 O ATOM 22 NE2 GLN 2 -0.325 -9.974 6.787 1.00 1.10 N ATOM 31 N GLU 3 0.491 -11.500 1.627 1.00 0.84 N ATOM 32 CA GLU 3 1.639 -10.902 0.978 1.00 0.84 C ATOM 33 C GLU 3 1.310 -9.487 0.505 1.00 0.84 C ATOM 34 O GLU 3 2.148 -8.586 0.608 1.00 0.84 O ATOM 35 CB GLU 3 2.093 -11.762 -0.204 1.00 0.84 C ATOM 36 CG GLU 3 3.304 -11.220 -0.948 1.00 0.84 C ATOM 37 CD GLU 3 3.740 -12.107 -2.081 1.00 0.84 C ATOM 38 OE1 GLU 3 3.320 -13.238 -2.119 1.00 0.84 O ATOM 39 OE2 GLU 3 4.494 -11.652 -2.910 1.00 0.84 O ATOM 46 N THR 4 0.082 -9.280 0.012 1.00 0.56 N ATOM 47 CA THR 4 -0.323 -7.967 -0.466 1.00 0.56 C ATOM 48 C THR 4 -0.348 -7.018 0.725 1.00 0.56 C ATOM 49 O THR 4 0.081 -5.865 0.614 1.00 0.56 O ATOM 50 CB THR 4 -1.699 -8.005 -1.155 1.00 0.56 C ATOM 51 OG1 THR 4 -1.659 -8.916 -2.261 1.00 0.56 O ATOM 52 CG2 THR 4 -2.083 -6.622 -1.658 1.00 0.56 C ATOM 60 N ARG 5 -0.880 -7.498 1.857 1.00 0.57 N ATOM 61 CA ARG 5 -0.963 -6.709 3.082 1.00 0.57 C ATOM 62 C ARG 5 0.449 -6.301 3.567 1.00 0.57 C ATOM 63 O ARG 5 0.650 -5.169 4.032 1.00 0.57 O ATOM 64 CB ARG 5 -1.664 -7.509 4.170 1.00 0.57 C ATOM 65 CG ARG 5 -3.153 -7.780 3.929 1.00 0.57 C ATOM 66 CD ARG 5 -3.701 -8.697 4.959 1.00 0.57 C ATOM 67 NE ARG 5 -5.084 -9.079 4.711 1.00 0.57 N ATOM 68 CZ ARG 5 -5.762 -10.022 5.402 1.00 0.57 C ATOM 69 NH1 ARG 5 -5.190 -10.719 6.383 1.00 0.57 N ATOM 70 NH2 ARG 5 -7.021 -10.250 5.068 1.00 0.57 N ATOM 84 N LYS 6 1.430 -7.219 3.456 1.00 0.39 N ATOM 85 CA LYS 6 2.811 -6.905 3.843 1.00 0.39 C ATOM 86 C LYS 6 3.386 -5.808 2.947 1.00 0.39 C ATOM 87 O LYS 6 4.045 -4.876 3.430 1.00 0.39 O ATOM 88 CB LYS 6 3.689 -8.156 3.776 1.00 0.39 C ATOM 89 CG LYS 6 3.396 -9.188 4.858 1.00 0.39 C ATOM 90 CD LYS 6 4.288 -10.412 4.709 1.00 0.39 C ATOM 91 CE LYS 6 4.006 -11.438 5.795 1.00 0.39 C ATOM 92 NZ LYS 6 4.869 -12.644 5.659 1.00 0.39 N ATOM 106 N LYS 7 3.123 -5.920 1.640 1.00 0.42 N ATOM 107 CA LYS 7 3.552 -4.933 0.658 1.00 0.42 C ATOM 108 C LYS 7 2.875 -3.582 0.950 1.00 0.42 C ATOM 109 O LYS 7 3.495 -2.520 0.824 1.00 0.42 O ATOM 110 CB LYS 7 3.229 -5.405 -0.761 1.00 0.42 C ATOM 111 CG LYS 7 4.086 -6.565 -1.248 1.00 0.42 C ATOM 112 CD LYS 7 3.613 -7.071 -2.604 1.00 0.42 C ATOM 113 CE LYS 7 4.455 -8.244 -3.082 1.00 0.42 C ATOM 114 NZ LYS 7 3.873 -8.892 -4.288 1.00 0.42 N ATOM 128 N CYS 8 1.603 -3.623 1.377 1.00 0.45 N ATOM 129 CA CYS 8 0.885 -2.401 1.712 1.00 0.45 C ATOM 130 C CYS 8 1.537 -1.706 2.886 1.00 0.45 C ATOM 131 O CYS 8 1.692 -0.480 2.871 1.00 0.45 O ATOM 132 CB CYS 8 -0.576 -2.703 2.050 1.00 0.45 C ATOM 133 SG CYS 8 -1.574 -3.210 0.629 1.00 0.45 S ATOM 139 N THR 9 1.956 -2.488 3.885 1.00 0.57 N ATOM 140 CA THR 9 2.616 -1.955 5.067 1.00 0.57 C ATOM 141 C THR 9 3.904 -1.246 4.676 1.00 0.57 C ATOM 142 O THR 9 4.172 -0.144 5.168 1.00 0.57 O ATOM 143 CB THR 9 2.919 -3.066 6.089 1.00 0.57 C ATOM 144 OG1 THR 9 1.692 -3.664 6.528 1.00 0.57 O ATOM 145 CG2 THR 9 3.660 -2.498 7.290 1.00 0.57 C ATOM 153 N GLU 10 4.710 -1.869 3.801 1.00 0.48 N ATOM 154 CA GLU 10 5.955 -1.251 3.355 1.00 0.48 C ATOM 155 C GLU 10 5.695 0.125 2.749 1.00 0.48 C ATOM 156 O GLU 10 6.396 1.096 3.062 1.00 0.48 O ATOM 157 CB GLU 10 6.653 -2.112 2.297 1.00 0.48 C ATOM 158 CG GLU 10 7.984 -1.539 1.811 1.00 0.48 C ATOM 159 CD GLU 10 8.646 -2.368 0.750 1.00 0.48 C ATOM 160 OE1 GLU 10 8.166 -3.432 0.458 1.00 0.48 O ATOM 161 OE2 GLU 10 9.639 -1.914 0.207 1.00 0.48 O ATOM 168 N MET 11 4.684 0.210 1.872 1.00 0.66 N ATOM 169 CA MET 11 4.361 1.481 1.247 1.00 0.66 C ATOM 170 C MET 11 3.805 2.488 2.231 1.00 0.66 C ATOM 171 O MET 11 4.152 3.664 2.158 1.00 0.66 O ATOM 172 CB MET 11 3.368 1.262 0.107 1.00 0.66 C ATOM 173 CG MET 11 3.924 0.470 -1.067 1.00 0.66 C ATOM 174 SD MET 11 5.314 1.296 -1.868 1.00 0.66 S ATOM 175 CE MET 11 6.692 0.570 -0.987 1.00 0.66 C ATOM 185 N LYS 12 2.975 2.048 3.175 1.00 0.89 N ATOM 186 CA LYS 12 2.423 2.969 4.156 1.00 0.89 C ATOM 187 C LYS 12 3.536 3.611 4.977 1.00 0.89 C ATOM 188 O LYS 12 3.498 4.808 5.263 1.00 0.89 O ATOM 189 CB LYS 12 1.435 2.247 5.074 1.00 0.89 C ATOM 190 CG LYS 12 0.757 3.147 6.099 1.00 0.89 C ATOM 191 CD LYS 12 -0.267 2.376 6.917 1.00 0.89 C ATOM 192 CE LYS 12 -0.924 3.265 7.963 1.00 0.89 C ATOM 193 NZ LYS 12 -1.926 2.523 8.776 1.00 0.89 N ATOM 207 N LYS 13 4.523 2.807 5.384 1.00 0.63 N ATOM 208 CA LYS 13 5.637 3.327 6.163 1.00 0.63 C ATOM 209 C LYS 13 6.542 4.271 5.368 1.00 0.63 C ATOM 210 O LYS 13 6.971 5.301 5.898 1.00 0.63 O ATOM 211 CB LYS 13 6.463 2.167 6.721 1.00 0.63 C ATOM 212 CG LYS 13 5.779 1.385 7.834 1.00 0.63 C ATOM 213 CD LYS 13 6.662 0.256 8.340 1.00 0.63 C ATOM 214 CE LYS 13 6.014 -0.476 9.506 1.00 0.63 C ATOM 215 NZ LYS 13 6.857 -1.600 9.996 1.00 0.63 N ATOM 229 N LYS 14 6.849 3.934 4.107 1.00 0.58 N ATOM 230 CA LYS 14 7.710 4.793 3.295 1.00 0.58 C ATOM 231 C LYS 14 7.010 6.084 2.851 1.00 0.58 C ATOM 232 O LYS 14 7.563 7.185 2.969 1.00 0.58 O ATOM 233 CB LYS 14 8.252 3.996 2.108 1.00 0.58 C ATOM 234 CG LYS 14 9.267 2.932 2.548 1.00 0.58 C ATOM 235 CD LYS 14 9.781 2.070 1.404 1.00 0.58 C ATOM 236 CE LYS 14 10.843 1.091 1.922 1.00 0.58 C ATOM 237 NZ LYS 14 11.353 0.165 0.866 1.00 0.58 N ATOM 251 N PHE 15 5.766 5.980 2.399 1.00 0.75 N ATOM 252 CA PHE 15 5.016 7.149 1.982 1.00 0.75 C ATOM 253 C PHE 15 4.278 7.707 3.182 1.00 0.75 C ATOM 254 O PHE 15 3.060 7.570 3.312 1.00 0.75 O ATOM 255 CB PHE 15 4.028 6.801 0.867 1.00 0.75 C ATOM 256 CG PHE 15 4.684 6.464 -0.441 1.00 0.75 C ATOM 257 CD1 PHE 15 4.718 5.155 -0.899 1.00 0.75 C ATOM 258 CD2 PHE 15 5.271 7.453 -1.216 1.00 0.75 C ATOM 259 CE1 PHE 15 5.322 4.843 -2.102 1.00 0.75 C ATOM 260 CE2 PHE 15 5.874 7.145 -2.419 1.00 0.75 C ATOM 261 CZ PHE 15 5.900 5.837 -2.863 1.00 0.75 C ATOM 271 N LYS 16 5.040 8.322 4.064 1.00 1.19 N ATOM 272 CA LYS 16 4.530 8.814 5.330 1.00 1.19 C ATOM 273 C LYS 16 3.245 9.625 5.144 1.00 1.19 C ATOM 274 O LYS 16 3.177 10.522 4.304 1.00 1.19 O ATOM 275 CB LYS 16 5.593 9.660 6.034 1.00 1.19 C ATOM 276 CG LYS 16 5.193 10.146 7.421 1.00 1.19 C ATOM 277 CD LYS 16 6.326 10.911 8.086 1.00 1.19 C ATOM 278 CE LYS 16 5.941 11.370 9.485 1.00 1.19 C ATOM 279 NZ LYS 16 7.045 12.111 10.152 1.00 1.19 N ATOM 293 N ASN 17 2.239 9.285 5.957 1.00 1.19 N ATOM 294 CA ASN 17 0.891 9.876 6.011 1.00 1.19 C ATOM 295 C ASN 17 -0.000 9.610 4.785 1.00 1.19 C ATOM 296 O ASN 17 -1.064 10.219 4.647 1.00 1.19 O ATOM 297 CB ASN 17 1.007 11.372 6.236 1.00 1.19 C ATOM 298 CG ASN 17 1.635 11.710 7.560 1.00 1.19 C ATOM 299 OD1 ASN 17 1.436 11.003 8.554 1.00 1.19 O ATOM 300 ND2 ASN 17 2.390 12.779 7.593 1.00 1.19 N ATOM 307 N CYS 18 0.384 8.668 3.933 1.00 0.76 N ATOM 308 CA CYS 18 -0.437 8.287 2.785 1.00 0.76 C ATOM 309 C CYS 18 -1.515 7.281 3.164 1.00 0.76 C ATOM 310 O CYS 18 -1.459 6.647 4.225 1.00 0.76 O ATOM 311 CB CYS 18 0.434 7.690 1.679 1.00 0.76 C ATOM 312 SG CYS 18 0.983 5.998 2.005 1.00 0.76 S ATOM 318 N GLU 19 -2.487 7.108 2.272 1.00 0.66 N ATOM 319 CA GLU 19 -3.509 6.083 2.456 1.00 0.66 C ATOM 320 C GLU 19 -3.198 4.879 1.576 1.00 0.66 C ATOM 321 O GLU 19 -3.057 5.019 0.357 1.00 0.66 O ATOM 322 CB GLU 19 -4.909 6.610 2.120 1.00 0.66 C ATOM 323 CG GLU 19 -6.017 5.561 2.257 1.00 0.66 C ATOM 324 CD GLU 19 -7.384 6.047 1.855 1.00 0.66 C ATOM 325 OE1 GLU 19 -7.559 7.222 1.601 1.00 0.66 O ATOM 326 OE2 GLU 19 -8.279 5.227 1.816 1.00 0.66 O ATOM 333 N VAL 20 -3.104 3.685 2.159 1.00 0.39 N ATOM 334 CA VAL 20 -2.795 2.533 1.315 1.00 0.39 C ATOM 335 C VAL 20 -3.908 1.500 1.356 1.00 0.39 C ATOM 336 O VAL 20 -4.295 1.028 2.426 1.00 0.39 O ATOM 337 CB VAL 20 -1.477 1.876 1.769 1.00 0.39 C ATOM 338 CG1 VAL 20 -1.164 0.662 0.907 1.00 0.39 C ATOM 339 CG2 VAL 20 -0.345 2.890 1.703 1.00 0.39 C ATOM 349 N ARG 21 -4.405 1.144 0.177 1.00 0.51 N ATOM 350 CA ARG 21 -5.461 0.156 0.058 1.00 0.51 C ATOM 351 C ARG 21 -4.915 -1.183 -0.446 1.00 0.51 C ATOM 352 O ARG 21 -4.028 -1.241 -1.308 1.00 0.51 O ATOM 353 CB ARG 21 -6.577 0.687 -0.823 1.00 0.51 C ATOM 354 CG ARG 21 -7.268 1.916 -0.215 1.00 0.51 C ATOM 355 CD ARG 21 -8.363 2.462 -1.046 1.00 0.51 C ATOM 356 NE ARG 21 -8.952 3.650 -0.410 1.00 0.51 N ATOM 357 CZ ARG 21 -10.004 4.358 -0.859 1.00 0.51 C ATOM 358 NH1 ARG 21 -10.637 4.027 -1.972 1.00 0.51 N ATOM 359 NH2 ARG 21 -10.385 5.400 -0.145 1.00 0.51 N ATOM 373 N CYS 22 -5.463 -2.266 0.101 1.00 0.46 N ATOM 374 CA CYS 22 -5.046 -3.616 -0.257 1.00 0.46 C ATOM 375 C CYS 22 -5.993 -4.350 -1.191 1.00 0.46 C ATOM 376 O CYS 22 -7.091 -4.734 -0.783 1.00 0.46 O ATOM 377 CB CYS 22 -4.876 -4.454 1.010 1.00 0.46 C ATOM 378 SG CYS 22 -4.378 -6.166 0.702 1.00 0.46 S ATOM 384 N ASP 23 -5.565 -4.566 -2.434 1.00 0.41 N ATOM 385 CA ASP 23 -6.358 -5.293 -3.411 1.00 0.41 C ATOM 386 C ASP 23 -5.989 -6.755 -3.305 1.00 0.41 C ATOM 387 O ASP 23 -4.966 -7.189 -3.847 1.00 0.41 O ATOM 388 CB ASP 23 -6.121 -4.789 -4.834 1.00 0.41 C ATOM 389 CG ASP 23 -6.955 -5.534 -5.909 1.00 0.41 C ATOM 390 OD1 ASP 23 -7.426 -6.656 -5.661 1.00 0.41 O ATOM 391 OD2 ASP 23 -7.092 -5.004 -6.991 1.00 0.41 O ATOM 396 N GLU 24 -6.823 -7.532 -2.624 1.00 0.37 N ATOM 397 CA GLU 24 -6.512 -8.924 -2.341 1.00 0.37 C ATOM 398 C GLU 24 -6.843 -9.862 -3.506 1.00 0.37 C ATOM 399 O GLU 24 -6.652 -11.076 -3.393 1.00 0.37 O ATOM 400 CB GLU 24 -7.255 -9.379 -1.077 1.00 0.37 C ATOM 401 CG GLU 24 -6.787 -8.695 0.225 1.00 0.37 C ATOM 402 CD GLU 24 -7.483 -9.226 1.474 1.00 0.37 C ATOM 403 OE1 GLU 24 -8.352 -10.044 1.321 1.00 0.37 O ATOM 404 OE2 GLU 24 -7.128 -8.845 2.581 1.00 0.37 O ATOM 411 N SER 25 -7.381 -9.317 -4.606 1.00 1.22 N ATOM 412 CA SER 25 -7.723 -10.147 -5.758 1.00 1.22 C ATOM 413 C SER 25 -6.643 -10.047 -6.827 1.00 1.22 C ATOM 414 O SER 25 -6.243 -11.053 -7.419 1.00 1.22 O ATOM 415 CB SER 25 -9.061 -9.727 -6.334 1.00 1.22 C ATOM 416 OG SER 25 -8.999 -8.426 -6.852 1.00 1.22 O ATOM 422 N ASN 26 -6.127 -8.831 -7.042 1.00 0.83 N ATOM 423 CA ASN 26 -5.099 -8.609 -8.060 1.00 0.83 C ATOM 424 C ASN 26 -3.720 -8.478 -7.428 1.00 0.83 C ATOM 425 O ASN 26 -2.743 -8.145 -8.096 1.00 0.83 O ATOM 426 CB ASN 26 -5.409 -7.366 -8.868 1.00 0.83 C ATOM 427 CG ASN 26 -6.653 -7.501 -9.697 1.00 0.83 C ATOM 428 OD1 ASN 26 -6.732 -8.322 -10.625 1.00 0.83 O ATOM 429 ND2 ASN 26 -7.641 -6.698 -9.378 1.00 0.83 N ATOM 436 N HIS 27 -3.658 -8.740 -6.133 1.00 0.57 N ATOM 437 CA HIS 27 -2.450 -8.672 -5.313 1.00 0.57 C ATOM 438 C HIS 27 -1.711 -7.347 -5.438 1.00 0.57 C ATOM 439 O HIS 27 -0.484 -7.290 -5.566 1.00 0.57 O ATOM 440 CB HIS 27 -1.537 -9.839 -5.657 1.00 0.57 C ATOM 441 CG HIS 27 -2.234 -11.128 -5.465 1.00 0.57 C ATOM 442 ND1 HIS 27 -2.518 -11.652 -4.212 1.00 0.57 N ATOM 443 CD2 HIS 27 -2.754 -11.990 -6.365 1.00 0.57 C ATOM 444 CE1 HIS 27 -3.172 -12.796 -4.368 1.00 0.57 C ATOM 445 NE2 HIS 27 -3.326 -13.015 -5.661 1.00 0.57 N ATOM 453 N CYS 28 -2.464 -6.263 -5.410 1.00 0.38 N ATOM 454 CA CYS 28 -1.868 -4.949 -5.585 1.00 0.38 C ATOM 455 C CYS 28 -2.002 -3.996 -4.412 1.00 0.38 C ATOM 456 O CYS 28 -3.026 -3.931 -3.722 1.00 0.38 O ATOM 457 CB CYS 28 -2.482 -4.276 -6.814 1.00 0.38 C ATOM 458 SG CYS 28 -2.137 -5.130 -8.371 1.00 0.38 S ATOM 464 N VAL 29 -0.978 -3.180 -4.270 1.00 0.26 N ATOM 465 CA VAL 29 -0.954 -2.125 -3.288 1.00 0.26 C ATOM 466 C VAL 29 -1.224 -0.790 -3.953 1.00 0.26 C ATOM 467 O VAL 29 -0.458 -0.365 -4.826 1.00 0.26 O ATOM 468 CB VAL 29 0.436 -2.046 -2.678 1.00 0.26 C ATOM 469 CG1 VAL 29 0.499 -0.962 -1.679 1.00 0.26 C ATOM 470 CG2 VAL 29 0.822 -3.365 -2.096 1.00 0.26 C ATOM 480 N GLU 30 -2.290 -0.117 -3.532 1.00 0.40 N ATOM 481 CA GLU 30 -2.632 1.183 -4.105 1.00 0.40 C ATOM 482 C GLU 30 -2.372 2.304 -3.106 1.00 0.40 C ATOM 483 O GLU 30 -2.996 2.364 -2.045 1.00 0.40 O ATOM 484 CB GLU 30 -4.098 1.208 -4.544 1.00 0.40 C ATOM 485 CG GLU 30 -4.535 2.508 -5.203 1.00 0.40 C ATOM 486 CD GLU 30 -5.982 2.498 -5.615 1.00 0.40 C ATOM 487 OE1 GLU 30 -6.680 1.587 -5.239 1.00 0.40 O ATOM 488 OE2 GLU 30 -6.388 3.401 -6.306 1.00 0.40 O ATOM 495 N VAL 31 -1.465 3.220 -3.449 1.00 0.22 N ATOM 496 CA VAL 31 -1.081 4.279 -2.525 1.00 0.22 C ATOM 497 C VAL 31 -1.561 5.657 -2.967 1.00 0.22 C ATOM 498 O VAL 31 -1.151 6.158 -4.017 1.00 0.22 O ATOM 499 CB VAL 31 0.460 4.347 -2.472 1.00 0.22 C ATOM 500 CG1 VAL 31 0.930 5.456 -1.532 1.00 0.22 C ATOM 501 CG2 VAL 31 1.050 2.992 -2.111 1.00 0.22 C ATOM 511 N ARG 32 -2.387 6.292 -2.139 1.00 0.78 N ATOM 512 CA ARG 32 -2.858 7.648 -2.411 1.00 0.78 C ATOM 513 C ARG 32 -1.944 8.604 -1.652 1.00 0.78 C ATOM 514 O ARG 32 -1.884 8.573 -0.417 1.00 0.78 O ATOM 515 CB ARG 32 -4.303 7.840 -1.975 1.00 0.78 C ATOM 516 CG ARG 32 -4.875 9.222 -2.249 1.00 0.78 C ATOM 517 CD ARG 32 -6.322 9.293 -1.919 1.00 0.78 C ATOM 518 NE ARG 32 -6.563 9.117 -0.496 1.00 0.78 N ATOM 519 CZ ARG 32 -6.502 10.105 0.419 1.00 0.78 C ATOM 520 NH1 ARG 32 -6.207 11.331 0.044 1.00 0.78 N ATOM 521 NH2 ARG 32 -6.738 9.843 1.692 1.00 0.78 N ATOM 535 N CYS 33 -1.231 9.475 -2.350 1.00 0.79 N ATOM 536 CA CYS 33 -0.277 10.315 -1.631 1.00 0.79 C ATOM 537 C CYS 33 -0.048 11.641 -2.342 1.00 0.79 C ATOM 538 O CYS 33 0.212 11.670 -3.544 1.00 0.79 O ATOM 539 CB CYS 33 1.062 9.593 -1.475 1.00 0.79 C ATOM 540 SG CYS 33 2.295 10.520 -0.530 1.00 0.79 S ATOM 546 N SER 34 -0.131 12.737 -1.584 1.00 1.54 N ATOM 547 CA SER 34 0.027 14.075 -2.149 1.00 1.54 C ATOM 548 C SER 34 -0.982 14.262 -3.271 1.00 1.54 C ATOM 549 O SER 34 -2.171 13.984 -3.093 1.00 1.54 O ATOM 550 CB SER 34 1.436 14.278 -2.669 1.00 1.54 C ATOM 551 OG SER 34 1.643 15.609 -3.054 1.00 1.54 O ATOM 557 N ASP 35 -0.521 14.737 -4.422 1.00 1.50 N ATOM 558 CA ASP 35 -1.360 14.953 -5.586 1.00 1.50 C ATOM 559 C ASP 35 -1.248 13.827 -6.621 1.00 1.50 C ATOM 560 O ASP 35 -1.645 13.993 -7.779 1.00 1.50 O ATOM 561 CB ASP 35 -1.001 16.289 -6.241 1.00 1.50 C ATOM 562 CG ASP 35 -1.341 17.487 -5.366 1.00 1.50 C ATOM 563 OD1 ASP 35 -2.300 17.414 -4.636 1.00 1.50 O ATOM 564 OD2 ASP 35 -0.636 18.466 -5.435 1.00 1.50 O ATOM 569 N THR 36 -0.706 12.676 -6.220 1.00 0.99 N ATOM 570 CA THR 36 -0.531 11.567 -7.145 1.00 0.99 C ATOM 571 C THR 36 -0.806 10.201 -6.523 1.00 0.99 C ATOM 572 O THR 36 -1.435 10.075 -5.461 1.00 0.99 O ATOM 573 CB THR 36 0.894 11.577 -7.728 1.00 0.99 C ATOM 574 OG1 THR 36 0.985 10.621 -8.792 1.00 0.99 O ATOM 575 CG2 THR 36 1.913 11.231 -6.652 1.00 0.99 C ATOM 583 N LYS 37 -0.422 9.164 -7.263 1.00 0.43 N ATOM 584 CA LYS 37 -0.615 7.790 -6.832 1.00 0.43 C ATOM 585 C LYS 37 0.618 6.948 -7.115 1.00 0.43 C ATOM 586 O LYS 37 1.327 7.163 -8.102 1.00 0.43 O ATOM 587 CB LYS 37 -1.838 7.181 -7.519 1.00 0.43 C ATOM 588 CG LYS 37 -2.192 5.777 -7.045 1.00 0.43 C ATOM 589 CD LYS 37 -3.430 5.250 -7.753 1.00 0.43 C ATOM 590 CE LYS 37 -4.653 6.100 -7.437 1.00 0.43 C ATOM 591 NZ LYS 37 -5.906 5.488 -7.956 1.00 0.43 N ATOM 605 N TYR 38 0.838 5.960 -6.258 1.00 0.64 N ATOM 606 CA TYR 38 1.940 5.021 -6.425 1.00 0.64 C ATOM 607 C TYR 38 1.407 3.601 -6.325 1.00 0.64 C ATOM 608 O TYR 38 0.400 3.355 -5.654 1.00 0.64 O ATOM 609 CB TYR 38 3.021 5.251 -5.357 1.00 0.64 C ATOM 610 CG TYR 38 3.584 6.640 -5.344 1.00 0.64 C ATOM 611 CD1 TYR 38 3.014 7.606 -4.514 1.00 0.64 C ATOM 612 CD2 TYR 38 4.658 6.959 -6.142 1.00 0.64 C ATOM 613 CE1 TYR 38 3.543 8.878 -4.497 1.00 0.64 C ATOM 614 CE2 TYR 38 5.177 8.230 -6.119 1.00 0.64 C ATOM 615 CZ TYR 38 4.623 9.183 -5.301 1.00 0.64 C ATOM 616 OH TYR 38 5.153 10.449 -5.276 1.00 0.64 O ATOM 626 N THR 39 2.066 2.655 -6.984 1.00 1.08 N ATOM 627 CA THR 39 1.642 1.268 -6.844 1.00 1.08 C ATOM 628 C THR 39 2.793 0.313 -6.594 1.00 1.08 C ATOM 629 O THR 39 3.934 0.566 -6.991 1.00 1.08 O ATOM 630 CB THR 39 0.871 0.809 -8.096 1.00 1.08 C ATOM 631 OG1 THR 39 1.735 0.866 -9.239 1.00 1.08 O ATOM 632 CG2 THR 39 -0.338 1.701 -8.335 1.00 1.08 C ATOM 640 N LEU 40 2.447 -0.828 -6.005 1.00 0.73 N ATOM 641 CA LEU 40 3.369 -1.940 -5.759 1.00 0.73 C ATOM 642 C LEU 40 2.712 -3.311 -5.950 1.00 0.73 C ATOM 643 O LEU 40 1.616 -3.586 -5.452 1.00 0.73 O ATOM 644 CB LEU 40 3.933 -1.839 -4.337 1.00 0.73 C ATOM 645 CG LEU 40 4.865 -2.980 -3.909 1.00 0.73 C ATOM 646 CD1 LEU 40 6.115 -2.969 -4.779 1.00 0.73 C ATOM 647 CD2 LEU 40 5.222 -2.820 -2.438 1.00 0.73 C ATOM 659 N CYS 41 3.368 -4.183 -6.701 1.00 0.70 N ATOM 660 CA CYS 41 2.842 -5.525 -6.888 1.00 0.70 C ATOM 661 C CYS 41 4.008 -6.483 -7.099 1.00 0.70 C ATOM 662 O CYS 41 3.980 -7.616 -6.616 1.00 0.70 O ATOM 663 OXT CYS 41 5.083 -6.004 -7.451 1.00 0.70 O ATOM 664 CB CYS 41 1.895 -5.586 -8.087 1.00 0.70 C ATOM 665 SG CYS 41 1.158 -7.214 -8.363 1.00 0.70 S TER END