####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS337_5 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS337_5.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 39 3 - 41 4.80 5.61 LCS_AVERAGE: 92.86 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 25 - 41 1.64 7.87 LCS_AVERAGE: 30.64 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 27 - 40 1.00 8.56 LONGEST_CONTINUOUS_SEGMENT: 14 28 - 41 0.73 8.98 LCS_AVERAGE: 21.71 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 4 20 3 3 3 4 4 5 7 9 12 15 15 23 26 28 30 34 35 37 38 38 LCS_GDT Q 2 Q 2 3 4 20 3 3 3 4 4 5 7 8 12 17 20 23 26 28 32 34 35 37 38 38 LCS_GDT E 3 E 3 3 4 39 3 3 3 4 4 6 9 11 16 17 20 25 27 30 32 34 35 37 38 39 LCS_GDT T 4 T 4 3 4 39 3 3 3 4 4 7 9 14 16 17 20 25 27 30 32 34 35 37 38 39 LCS_GDT R 5 R 5 3 3 39 0 3 3 3 3 5 9 12 16 18 20 25 27 30 32 34 35 37 38 39 LCS_GDT K 6 K 6 3 12 39 3 3 3 7 14 17 20 22 29 32 34 36 36 36 36 36 36 37 38 39 LCS_GDT K 7 K 7 9 12 39 4 9 11 14 16 19 23 28 30 34 35 36 36 36 36 36 36 37 38 39 LCS_GDT C 8 C 8 9 12 39 7 9 11 14 16 20 24 29 30 34 35 36 36 36 36 36 36 37 38 39 LCS_GDT T 9 T 9 9 12 39 7 9 11 14 17 22 27 29 32 34 35 36 36 36 36 36 36 37 38 39 LCS_GDT E 10 E 10 9 12 39 7 9 11 14 17 22 27 29 32 34 35 36 36 36 36 36 36 37 38 39 LCS_GDT M 11 M 11 9 12 39 7 9 11 14 17 22 27 29 32 34 35 36 36 36 36 36 36 37 38 39 LCS_GDT K 12 K 12 9 12 39 7 9 11 14 17 22 27 29 32 34 35 36 36 36 36 36 36 37 38 39 LCS_GDT K 13 K 13 9 12 39 7 9 11 14 17 22 27 29 32 34 35 36 36 36 36 36 36 37 38 39 LCS_GDT K 14 K 14 9 12 39 7 9 11 14 17 22 27 29 32 34 35 36 36 36 36 36 36 37 38 39 LCS_GDT F 15 F 15 9 12 39 4 9 11 14 17 22 27 29 32 34 35 36 36 36 36 36 36 37 38 39 LCS_GDT K 16 K 16 3 12 39 3 3 5 7 11 14 22 25 32 34 35 36 36 36 36 36 36 37 38 39 LCS_GDT N 17 N 17 3 12 39 3 6 10 14 17 22 27 29 32 34 35 36 36 36 36 36 36 37 38 39 LCS_GDT C 18 C 18 6 9 39 5 6 6 7 11 11 16 22 26 31 35 36 36 36 36 36 36 37 38 39 LCS_GDT E 19 E 19 6 9 39 5 6 6 10 11 15 19 29 32 34 35 36 36 36 36 36 36 37 38 39 LCS_GDT V 20 V 20 6 9 39 5 6 6 10 15 21 27 29 32 34 35 36 36 36 36 36 36 37 38 39 LCS_GDT R 21 R 21 6 9 39 5 6 7 10 14 21 27 29 32 34 35 36 36 36 36 36 36 37 38 39 LCS_GDT C 22 C 22 6 9 39 5 6 7 10 12 19 25 29 32 34 35 36 36 36 36 36 36 37 38 39 LCS_GDT D 23 D 23 6 9 39 3 6 7 10 11 16 22 27 32 34 35 36 36 36 36 36 36 37 38 39 LCS_GDT E 24 E 24 5 9 39 3 4 7 10 11 14 22 28 32 34 35 36 36 36 36 36 36 37 38 39 LCS_GDT S 25 S 25 4 17 39 3 4 5 9 15 21 27 29 32 34 35 36 36 36 36 36 36 37 38 39 LCS_GDT N 26 N 26 5 17 39 3 4 9 14 17 22 27 29 32 34 35 36 36 36 36 36 36 37 38 39 LCS_GDT H 27 H 27 14 17 39 4 5 12 15 17 22 27 29 32 34 35 36 36 36 36 36 36 37 38 39 LCS_GDT C 28 C 28 14 17 39 3 9 14 15 17 22 27 29 32 34 35 36 36 36 36 36 36 37 38 39 LCS_GDT V 29 V 29 14 17 39 6 12 14 15 16 21 27 29 32 34 35 36 36 36 36 36 36 37 38 39 LCS_GDT E 30 E 30 14 17 39 9 12 14 15 17 22 27 29 32 34 35 36 36 36 36 36 36 37 38 39 LCS_GDT V 31 V 31 14 17 39 9 12 14 15 17 22 27 29 32 34 35 36 36 36 36 36 36 37 38 39 LCS_GDT R 32 R 32 14 17 39 6 12 14 15 17 22 27 29 32 34 35 36 36 36 36 36 36 37 38 39 LCS_GDT C 33 C 33 14 17 39 9 12 14 15 17 22 27 29 32 34 35 36 36 36 36 36 36 37 38 39 LCS_GDT S 34 S 34 14 17 39 4 12 14 15 17 22 27 29 32 34 35 36 36 36 36 36 36 37 38 39 LCS_GDT D 35 D 35 14 17 39 9 12 14 15 16 21 27 29 32 34 35 36 36 36 36 36 36 37 38 39 LCS_GDT T 36 T 36 14 17 39 9 12 14 15 16 22 27 29 32 34 35 36 36 36 36 36 36 37 38 39 LCS_GDT K 37 K 37 14 17 39 9 12 14 15 17 22 27 29 32 34 35 36 36 36 36 36 36 37 38 39 LCS_GDT Y 38 Y 38 14 17 39 6 12 14 15 16 22 27 29 32 34 35 36 36 36 36 36 36 37 38 39 LCS_GDT T 39 T 39 14 17 39 9 12 14 15 17 22 27 29 32 34 35 36 36 36 36 36 36 37 38 39 LCS_GDT L 40 L 40 14 17 39 9 12 14 15 17 22 27 29 32 34 35 36 36 36 36 36 36 37 38 39 LCS_GDT C 41 C 41 14 17 39 9 12 14 15 17 22 27 29 32 34 35 36 36 36 36 36 36 37 38 39 LCS_AVERAGE LCS_A: 48.40 ( 21.71 30.64 92.86 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 12 14 15 17 22 27 29 32 34 35 36 36 36 36 36 36 37 38 39 GDT PERCENT_AT 21.95 29.27 34.15 36.59 41.46 53.66 65.85 70.73 78.05 82.93 85.37 87.80 87.80 87.80 87.80 87.80 87.80 90.24 92.68 95.12 GDT RMS_LOCAL 0.34 0.55 0.73 1.03 1.70 2.12 2.60 2.79 3.08 3.24 3.35 3.52 3.52 3.52 3.52 3.52 3.52 4.07 4.46 4.80 GDT RMS_ALL_AT 8.97 9.25 8.98 8.43 5.99 5.97 6.34 6.45 6.68 6.39 6.37 6.17 6.17 6.17 6.17 6.17 6.17 5.91 5.72 5.61 # Checking swapping # possible swapping detected: E 3 E 3 # possible swapping detected: E 10 E 10 # possible swapping detected: D 23 D 23 # possible swapping detected: E 30 E 30 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 17.995 0 0.451 0.850 19.010 0.000 0.000 19.010 LGA Q 2 Q 2 17.422 0 0.592 1.136 21.517 0.000 0.000 21.517 LGA E 3 E 3 13.786 0 0.649 1.431 19.989 0.000 0.000 18.894 LGA T 4 T 4 14.322 0 0.629 1.361 16.703 0.000 0.000 16.703 LGA R 5 R 5 14.497 0 0.632 1.250 26.585 0.000 0.000 26.585 LGA K 6 K 6 8.206 0 0.626 1.368 10.212 0.000 10.505 2.020 LGA K 7 K 7 5.642 0 0.568 1.087 6.884 3.182 1.414 6.010 LGA C 8 C 8 4.610 0 0.130 0.826 7.591 7.727 5.152 7.591 LGA T 9 T 9 3.685 0 0.049 1.066 5.860 15.455 9.610 5.860 LGA E 10 E 10 3.769 0 0.039 0.385 7.150 16.818 8.081 4.823 LGA M 11 M 11 2.653 0 0.104 1.465 3.218 33.636 35.455 3.218 LGA K 12 K 12 2.003 0 0.061 0.650 2.292 44.545 48.283 1.669 LGA K 13 K 13 1.838 0 0.076 1.586 10.992 44.545 24.646 10.992 LGA K 14 K 14 2.089 0 0.034 0.771 6.557 44.545 24.444 6.557 LGA F 15 F 15 1.455 0 0.374 0.481 6.199 45.455 23.967 5.619 LGA K 16 K 16 5.343 0 0.196 0.993 13.389 5.455 2.424 13.389 LGA N 17 N 17 2.273 0 0.625 0.985 8.016 36.364 19.091 4.867 LGA C 18 C 18 5.937 0 0.607 0.610 10.197 1.818 1.212 10.197 LGA E 19 E 19 4.247 0 0.248 1.245 8.253 3.636 2.222 8.253 LGA V 20 V 20 3.491 0 0.146 1.167 5.222 14.545 11.169 4.525 LGA R 21 R 21 3.653 0 0.103 0.966 5.235 12.727 7.107 5.235 LGA C 22 C 22 4.800 0 0.040 0.850 5.261 3.636 2.727 5.261 LGA D 23 D 23 5.794 0 0.268 0.997 7.094 0.000 1.364 3.577 LGA E 24 E 24 5.279 0 0.587 1.237 5.887 0.000 1.616 4.653 LGA S 25 S 25 4.148 0 0.209 0.693 6.351 15.909 10.909 6.351 LGA N 26 N 26 2.143 0 0.593 0.820 7.923 52.273 26.818 6.585 LGA H 27 H 27 1.459 0 0.055 1.146 2.779 51.364 43.818 2.275 LGA C 28 C 28 2.386 0 0.074 0.697 2.771 32.727 37.273 1.122 LGA V 29 V 29 3.091 0 0.137 1.023 4.390 27.727 19.740 3.582 LGA E 30 E 30 1.992 0 0.092 0.399 3.934 36.364 29.899 3.934 LGA V 31 V 31 2.444 0 0.024 0.101 3.836 47.727 32.987 3.836 LGA R 32 R 32 1.738 0 0.202 1.128 3.982 38.636 44.463 2.266 LGA C 33 C 33 2.879 0 0.550 0.975 5.210 30.455 20.606 5.210 LGA S 34 S 34 2.833 0 0.407 0.429 3.862 20.909 17.576 3.635 LGA D 35 D 35 3.031 0 0.049 1.178 3.349 20.455 27.500 1.604 LGA T 36 T 36 2.910 0 0.075 1.112 4.843 30.455 20.519 4.843 LGA K 37 K 37 2.151 0 0.059 0.741 5.308 30.455 18.586 5.308 LGA Y 38 Y 38 2.743 0 0.058 1.249 3.725 45.455 29.091 3.653 LGA T 39 T 39 1.438 0 0.161 1.010 4.591 55.000 38.701 3.639 LGA L 40 L 40 1.498 0 0.172 0.304 4.354 58.636 37.045 3.854 LGA C 41 C 41 1.684 0 0.517 1.317 5.452 62.273 42.078 5.452 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 5.491 5.379 6.431 24.169 18.002 9.667 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 29 2.79 56.098 53.262 1.003 LGA_LOCAL RMSD: 2.791 Number of atoms: 29 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 6.447 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 5.491 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.951600 * X + -0.280444 * Y + -0.125730 * Z + 40.588650 Y_new = -0.302307 * X + -0.927835 * Y + -0.218479 * Z + 32.310425 Z_new = -0.055385 * X + 0.245914 * Y + -0.967708 * Z + 21.811827 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.307600 0.055414 2.892740 [DEG: -17.6242 3.1750 165.7418 ] ZXZ: -0.522193 2.886770 -0.221526 [DEG: -29.9195 165.3997 -12.6925 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS337_5 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS337_5.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 29 2.79 53.262 5.49 REMARK ---------------------------------------------------------- MOLECULE T0955TS337_5 PFRMAT TS TARGET T0955 MODEL 5 PARENT N/A ATOM 1 N SER 1 15.058 -17.427 7.034 1.00 70.06 N ATOM 2 CA SER 1 16.230 -17.856 6.242 1.00 70.06 C ATOM 3 CB SER 1 15.911 -19.170 5.510 1.00 70.06 C ATOM 4 OG SER 1 17.066 -19.644 4.834 1.00 70.06 O ATOM 5 C SER 1 16.524 -16.793 5.243 1.00 70.06 C ATOM 6 O SER 1 17.265 -15.851 5.523 1.00 70.06 O ATOM 7 N GLN 2 15.935 -16.915 4.041 1.00226.45 N ATOM 8 CA GLN 2 16.164 -15.901 3.066 1.00226.45 C ATOM 9 CB GLN 2 15.617 -16.235 1.666 1.00226.45 C ATOM 10 CG GLN 2 16.512 -17.181 0.876 1.00226.45 C ATOM 11 CD GLN 2 17.622 -16.329 0.272 1.00226.45 C ATOM 12 OE1 GLN 2 18.060 -15.342 0.864 1.00226.45 O ATOM 13 NE2 GLN 2 18.073 -16.710 -0.952 1.00226.45 N ATOM 14 C GLN 2 15.462 -14.675 3.520 1.00226.45 C ATOM 15 O GLN 2 14.266 -14.694 3.807 1.00226.45 O ATOM 16 N GLU 3 16.214 -13.567 3.628 1.00232.11 N ATOM 17 CA GLU 3 15.553 -12.340 3.924 1.00232.11 C ATOM 18 CB GLU 3 16.365 -11.328 4.753 1.00232.11 C ATOM 19 CG GLU 3 16.458 -11.615 6.250 1.00232.11 C ATOM 20 CD GLU 3 17.007 -10.341 6.874 1.00232.11 C ATOM 21 OE1 GLU 3 17.369 -9.426 6.085 1.00232.11 O ATOM 22 OE2 GLU 3 17.072 -10.258 8.128 1.00232.11 O ATOM 23 C GLU 3 15.370 -11.708 2.595 1.00232.11 C ATOM 24 O GLU 3 16.340 -11.460 1.884 1.00232.11 O ATOM 25 N THR 4 14.114 -11.446 2.203 1.00222.53 N ATOM 26 CA THR 4 13.941 -10.819 0.930 1.00222.53 C ATOM 27 CB THR 4 13.019 -11.555 0.005 1.00222.53 C ATOM 28 OG1 THR 4 13.524 -12.859 -0.235 1.00222.53 O ATOM 29 CG2 THR 4 12.901 -10.780 -1.321 1.00222.53 C ATOM 30 C THR 4 13.357 -9.487 1.205 1.00222.53 C ATOM 31 O THR 4 12.565 -9.332 2.133 1.00222.53 O ATOM 32 N ARG 5 13.749 -8.475 0.416 1.00274.49 N ATOM 33 CA ARG 5 13.251 -7.173 0.720 1.00274.49 C ATOM 34 CB ARG 5 14.218 -6.032 0.358 1.00274.49 C ATOM 35 CG ARG 5 15.460 -5.980 1.249 1.00274.49 C ATOM 36 CD ARG 5 16.316 -4.733 1.024 1.00274.49 C ATOM 37 NE ARG 5 16.853 -4.790 -0.366 1.00274.49 N ATOM 38 CZ ARG 5 17.596 -3.754 -0.856 1.00274.49 C ATOM 39 NH1 ARG 5 17.862 -2.674 -0.065 1.00274.49 N ATOM 40 NH2 ARG 5 18.070 -3.799 -2.136 1.00274.49 N ATOM 41 C ARG 5 11.982 -6.952 -0.027 1.00274.49 C ATOM 42 O ARG 5 11.845 -7.309 -1.195 1.00274.49 O ATOM 43 N LYS 6 11.000 -6.370 0.682 1.00271.66 N ATOM 44 CA LYS 6 9.754 -6.011 0.084 1.00271.66 C ATOM 45 CB LYS 6 8.601 -6.927 0.515 1.00271.66 C ATOM 46 CG LYS 6 8.813 -8.385 0.100 1.00271.66 C ATOM 47 CD LYS 6 7.936 -9.373 0.872 1.00271.66 C ATOM 48 CE LYS 6 8.228 -9.350 2.373 1.00271.66 C ATOM 49 NZ LYS 6 9.689 -9.432 2.599 1.00271.66 N ATOM 50 C LYS 6 9.458 -4.654 0.623 1.00271.66 C ATOM 51 O LYS 6 9.782 -4.353 1.772 1.00271.66 O ATOM 52 N LYS 7 8.861 -3.771 -0.193 1.00268.98 N ATOM 53 CA LYS 7 8.559 -2.496 0.376 1.00268.98 C ATOM 54 CB LYS 7 9.032 -1.286 -0.449 1.00268.98 C ATOM 55 CG LYS 7 8.646 -1.320 -1.928 1.00268.98 C ATOM 56 CD LYS 7 9.392 -2.389 -2.727 1.00268.98 C ATOM 57 CE LYS 7 9.233 -2.228 -4.239 1.00268.98 C ATOM 58 NZ LYS 7 10.259 -3.027 -4.943 1.00268.98 N ATOM 59 C LYS 7 7.083 -2.402 0.516 1.00268.98 C ATOM 60 O LYS 7 6.375 -2.007 -0.406 1.00268.98 O ATOM 61 N CYS 8 6.586 -2.774 1.704 1.00159.95 N ATOM 62 CA CYS 8 5.191 -2.695 1.983 1.00159.95 C ATOM 63 CB CYS 8 4.555 -4.071 2.229 1.00159.95 C ATOM 64 SG CYS 8 4.425 -5.027 0.685 1.00159.95 S ATOM 65 C CYS 8 5.101 -1.870 3.218 1.00159.95 C ATOM 66 O CYS 8 4.608 -0.744 3.192 1.00159.95 O ATOM 67 N THR 9 5.601 -2.409 4.343 1.00103.45 N ATOM 68 CA THR 9 5.597 -1.644 5.552 1.00103.45 C ATOM 69 CB THR 9 6.124 -2.422 6.735 1.00103.45 C ATOM 70 OG1 THR 9 5.959 -1.677 7.932 1.00103.45 O ATOM 71 CG2 THR 9 7.607 -2.769 6.519 1.00103.45 C ATOM 72 C THR 9 6.453 -0.432 5.326 1.00103.45 C ATOM 73 O THR 9 6.068 0.680 5.686 1.00103.45 O ATOM 74 N GLU 10 7.635 -0.615 4.700 1.00 64.24 N ATOM 75 CA GLU 10 8.528 0.486 4.470 1.00 64.24 C ATOM 76 CB GLU 10 9.869 0.068 3.852 1.00 64.24 C ATOM 77 CG GLU 10 10.853 1.239 3.779 1.00 64.24 C ATOM 78 CD GLU 10 12.127 0.756 3.107 1.00 64.24 C ATOM 79 OE1 GLU 10 12.020 0.242 1.962 1.00 64.24 O ATOM 80 OE2 GLU 10 13.220 0.907 3.713 1.00 64.24 O ATOM 81 C GLU 10 7.894 1.441 3.511 1.00 64.24 C ATOM 82 O GLU 10 7.955 2.656 3.692 1.00 64.24 O ATOM 83 N MET 11 7.258 0.915 2.448 1.00 74.73 N ATOM 84 CA MET 11 6.661 1.805 1.497 1.00 74.73 C ATOM 85 CB MET 11 6.001 1.067 0.323 1.00 74.73 C ATOM 86 CG MET 11 5.166 1.979 -0.582 1.00 74.73 C ATOM 87 SD MET 11 4.388 1.108 -1.974 1.00 74.73 S ATOM 88 CE MET 11 3.442 -0.035 -0.925 1.00 74.73 C ATOM 89 C MET 11 5.590 2.568 2.196 1.00 74.73 C ATOM 90 O MET 11 5.477 3.784 2.055 1.00 74.73 O ATOM 91 N LYS 12 4.802 1.854 3.011 1.00 70.42 N ATOM 92 CA LYS 12 3.693 2.425 3.705 1.00 70.42 C ATOM 93 CB LYS 12 2.934 1.373 4.526 1.00 70.42 C ATOM 94 CG LYS 12 1.713 1.926 5.259 1.00 70.42 C ATOM 95 CD LYS 12 0.800 0.835 5.826 1.00 70.42 C ATOM 96 CE LYS 12 -0.407 1.375 6.596 1.00 70.42 C ATOM 97 NZ LYS 12 -1.188 0.250 7.160 1.00 70.42 N ATOM 98 C LYS 12 4.187 3.484 4.644 1.00 70.42 C ATOM 99 O LYS 12 3.563 4.538 4.774 1.00 70.42 O ATOM 100 N LYS 13 5.325 3.249 5.322 1.00120.73 N ATOM 101 CA LYS 13 5.800 4.228 6.259 1.00120.73 C ATOM 102 CB LYS 13 7.066 3.801 7.045 1.00120.73 C ATOM 103 CG LYS 13 8.345 3.622 6.218 1.00120.73 C ATOM 104 CD LYS 13 8.980 4.925 5.727 1.00120.73 C ATOM 105 CE LYS 13 10.007 4.735 4.613 1.00120.73 C ATOM 106 NZ LYS 13 10.283 6.037 3.969 1.00120.73 N ATOM 107 C LYS 13 6.107 5.464 5.488 1.00120.73 C ATOM 108 O LYS 13 5.961 6.579 5.985 1.00120.73 O ATOM 109 N LYS 14 6.556 5.274 4.239 1.00113.81 N ATOM 110 CA LYS 14 6.952 6.344 3.375 1.00113.81 C ATOM 111 CB LYS 14 7.518 5.836 2.039 1.00113.81 C ATOM 112 CG LYS 14 7.940 6.956 1.089 1.00113.81 C ATOM 113 CD LYS 14 8.654 6.449 -0.162 1.00113.81 C ATOM 114 CE LYS 14 10.108 6.045 0.074 1.00113.81 C ATOM 115 NZ LYS 14 10.549 5.145 -1.014 1.00113.81 N ATOM 116 C LYS 14 5.803 7.260 3.056 1.00113.81 C ATOM 117 O LYS 14 6.022 8.464 2.933 1.00113.81 O ATOM 118 N PHE 15 4.562 6.730 2.922 1.00 78.35 N ATOM 119 CA PHE 15 3.419 7.507 2.480 1.00 78.35 C ATOM 120 CB PHE 15 2.054 6.806 2.647 1.00 78.35 C ATOM 121 CG PHE 15 1.939 5.702 1.655 1.00 78.35 C ATOM 122 CD1 PHE 15 2.552 4.496 1.884 1.00 78.35 C ATOM 123 CD2 PHE 15 1.206 5.872 0.501 1.00 78.35 C ATOM 124 CE1 PHE 15 2.435 3.472 0.973 1.00 78.35 C ATOM 125 CE2 PHE 15 1.084 4.852 -0.415 1.00 78.35 C ATOM 126 CZ PHE 15 1.706 3.649 -0.182 1.00 78.35 C ATOM 127 C PHE 15 3.333 8.819 3.204 1.00 78.35 C ATOM 128 O PHE 15 3.438 8.891 4.426 1.00 78.35 O ATOM 129 N LYS 16 3.168 9.901 2.406 1.00 93.98 N ATOM 130 CA LYS 16 3.162 11.267 2.857 1.00 93.98 C ATOM 131 CB LYS 16 3.144 12.247 1.671 1.00 93.98 C ATOM 132 CG LYS 16 3.134 13.730 2.043 1.00 93.98 C ATOM 133 CD LYS 16 3.437 14.614 0.831 1.00 93.98 C ATOM 134 CE LYS 16 3.386 16.120 1.088 1.00 93.98 C ATOM 135 NZ LYS 16 3.613 16.842 -0.184 1.00 93.98 N ATOM 136 C LYS 16 2.004 11.605 3.740 1.00 93.98 C ATOM 137 O LYS 16 2.199 12.049 4.870 1.00 93.98 O ATOM 138 N ASN 17 0.767 11.382 3.273 1.00 77.20 N ATOM 139 CA ASN 17 -0.372 11.803 4.042 1.00 77.20 C ATOM 140 CB ASN 17 -1.573 12.318 3.224 1.00 77.20 C ATOM 141 CG ASN 17 -1.430 13.829 3.031 1.00 77.20 C ATOM 142 OD1 ASN 17 -0.339 14.368 2.842 1.00 77.20 O ATOM 143 ND2 ASN 17 -2.581 14.549 3.130 1.00 77.20 N ATOM 144 C ASN 17 -0.854 10.770 5.009 1.00 77.20 C ATOM 145 O ASN 17 -0.455 9.607 4.982 1.00 77.20 O ATOM 146 N CYS 18 -1.738 11.233 5.917 1.00 37.98 N ATOM 147 CA CYS 18 -2.318 10.487 6.997 1.00 37.98 C ATOM 148 CB CYS 18 -3.225 11.354 7.893 1.00 37.98 C ATOM 149 SG CYS 18 -2.346 12.737 8.678 1.00 37.98 S ATOM 150 C CYS 18 -3.184 9.387 6.472 1.00 37.98 C ATOM 151 O CYS 18 -3.197 8.292 7.035 1.00 37.98 O ATOM 152 N GLU 19 -3.942 9.644 5.387 1.00 75.88 N ATOM 153 CA GLU 19 -4.893 8.659 4.944 1.00 75.88 C ATOM 154 CB GLU 19 -6.198 9.274 4.406 1.00 75.88 C ATOM 155 CG GLU 19 -6.890 10.215 5.402 1.00 75.88 C ATOM 156 CD GLU 19 -7.433 9.441 6.601 1.00 75.88 C ATOM 157 OE1 GLU 19 -7.360 8.183 6.595 1.00 75.88 O ATOM 158 OE2 GLU 19 -7.923 10.112 7.549 1.00 75.88 O ATOM 159 C GLU 19 -4.317 7.886 3.805 1.00 75.88 C ATOM 160 O GLU 19 -3.725 8.467 2.898 1.00 75.88 O ATOM 161 N VAL 20 -4.487 6.546 3.815 1.00 89.92 N ATOM 162 CA VAL 20 -4.001 5.720 2.746 1.00 89.92 C ATOM 163 CB VAL 20 -3.151 4.563 3.194 1.00 89.92 C ATOM 164 CG1 VAL 20 -1.904 5.103 3.913 1.00 89.92 C ATOM 165 CG2 VAL 20 -4.018 3.615 4.041 1.00 89.92 C ATOM 166 C VAL 20 -5.195 5.105 2.094 1.00 89.92 C ATOM 167 O VAL 20 -6.161 4.730 2.758 1.00 89.92 O ATOM 168 N ARG 21 -5.151 4.999 0.756 1.00159.22 N ATOM 169 CA ARG 21 -6.237 4.414 0.033 1.00159.22 C ATOM 170 CB ARG 21 -6.840 5.345 -1.028 1.00159.22 C ATOM 171 CG ARG 21 -7.889 4.660 -1.907 1.00159.22 C ATOM 172 CD ARG 21 -9.204 4.351 -1.191 1.00159.22 C ATOM 173 NE ARG 21 -10.222 5.327 -1.672 1.00159.22 N ATOM 174 CZ ARG 21 -10.979 5.023 -2.767 1.00159.22 C ATOM 175 NH1 ARG 21 -10.786 3.841 -3.425 1.00159.22 N ATOM 176 NH2 ARG 21 -11.924 5.900 -3.213 1.00159.22 N ATOM 177 C ARG 21 -5.693 3.239 -0.696 1.00159.22 C ATOM 178 O ARG 21 -4.550 3.254 -1.152 1.00159.22 O ATOM 179 N CYS 22 -6.499 2.168 -0.810 1.00 79.25 N ATOM 180 CA CYS 22 -5.999 1.040 -1.530 1.00 79.25 C ATOM 181 CB CYS 22 -5.595 -0.147 -0.646 1.00 79.25 C ATOM 182 SG CYS 22 -7.038 -0.912 0.147 1.00 79.25 S ATOM 183 C CYS 22 -7.083 0.534 -2.414 1.00 79.25 C ATOM 184 O CYS 22 -8.263 0.560 -2.067 1.00 79.25 O ATOM 185 N ASP 23 -6.686 0.076 -3.612 1.00 84.09 N ATOM 186 CA ASP 23 -7.623 -0.538 -4.492 1.00 84.09 C ATOM 187 CB ASP 23 -7.715 0.171 -5.848 1.00 84.09 C ATOM 188 CG ASP 23 -8.958 -0.343 -6.556 1.00 84.09 C ATOM 189 OD1 ASP 23 -9.453 -1.431 -6.161 1.00 84.09 O ATOM 190 OD2 ASP 23 -9.438 0.346 -7.495 1.00 84.09 O ATOM 191 C ASP 23 -7.094 -1.915 -4.706 1.00 84.09 C ATOM 192 O ASP 23 -6.076 -2.095 -5.373 1.00 84.09 O ATOM 193 N GLU 24 -7.756 -2.926 -4.112 1.00 94.26 N ATOM 194 CA GLU 24 -7.233 -4.252 -4.236 1.00 94.26 C ATOM 195 CB GLU 24 -7.236 -4.996 -2.881 1.00 94.26 C ATOM 196 CG GLU 24 -6.623 -6.399 -2.881 1.00 94.26 C ATOM 197 CD GLU 24 -7.736 -7.420 -2.674 1.00 94.26 C ATOM 198 OE1 GLU 24 -8.838 -7.020 -2.208 1.00 94.26 O ATOM 199 OE2 GLU 24 -7.491 -8.620 -2.971 1.00 94.26 O ATOM 200 C GLU 24 -8.050 -4.996 -5.240 1.00 94.26 C ATOM 201 O GLU 24 -9.149 -5.467 -4.944 1.00 94.26 O ATOM 202 N SER 25 -7.518 -5.096 -6.477 1.00 92.23 N ATOM 203 CA SER 25 -8.185 -5.823 -7.515 1.00 92.23 C ATOM 204 CB SER 25 -7.395 -5.812 -8.837 1.00 92.23 C ATOM 205 OG SER 25 -8.056 -6.601 -9.816 1.00 92.23 O ATOM 206 C SER 25 -8.274 -7.238 -7.053 1.00 92.23 C ATOM 207 O SER 25 -9.308 -7.685 -6.560 1.00 92.23 O ATOM 208 N ASN 26 -7.158 -7.974 -7.204 1.00180.46 N ATOM 209 CA ASN 26 -7.028 -9.306 -6.702 1.00180.46 C ATOM 210 CB ASN 26 -7.549 -10.399 -7.656 1.00180.46 C ATOM 211 CG ASN 26 -9.074 -10.411 -7.634 1.00180.46 C ATOM 212 OD1 ASN 26 -9.729 -9.643 -8.334 1.00180.46 O ATOM 213 ND2 ASN 26 -9.657 -11.329 -6.818 1.00180.46 N ATOM 214 C ASN 26 -5.556 -9.498 -6.564 1.00180.46 C ATOM 215 O ASN 26 -4.861 -9.746 -7.546 1.00180.46 O ATOM 216 N HIS 27 -5.037 -9.372 -5.332 1.00 77.17 N ATOM 217 CA HIS 27 -3.633 -9.540 -5.104 1.00 77.17 C ATOM 218 ND1 HIS 27 -5.067 -12.418 -4.399 1.00 77.17 N ATOM 219 CG HIS 27 -3.832 -11.830 -4.251 1.00 77.17 C ATOM 220 CB HIS 27 -3.172 -10.989 -5.299 1.00 77.17 C ATOM 221 NE2 HIS 27 -4.380 -12.889 -2.339 1.00 77.17 N ATOM 222 CD2 HIS 27 -3.424 -12.128 -2.987 1.00 77.17 C ATOM 223 CE1 HIS 27 -5.347 -13.039 -3.224 1.00 77.17 C ATOM 224 C HIS 27 -2.897 -8.602 -5.999 1.00 77.17 C ATOM 225 O HIS 27 -1.776 -8.868 -6.434 1.00 77.17 O ATOM 226 N CYS 28 -3.538 -7.459 -6.291 1.00 90.71 N ATOM 227 CA CYS 28 -2.931 -6.406 -7.039 1.00 90.71 C ATOM 228 CB CYS 28 -3.364 -6.393 -8.511 1.00 90.71 C ATOM 229 SG CYS 28 -2.385 -5.245 -9.518 1.00 90.71 S ATOM 230 C CYS 28 -3.459 -5.172 -6.391 1.00 90.71 C ATOM 231 O CYS 28 -4.672 -5.012 -6.255 1.00 90.71 O ATOM 232 N VAL 29 -2.585 -4.258 -5.939 1.00103.92 N ATOM 233 CA VAL 29 -3.197 -3.166 -5.252 1.00103.92 C ATOM 234 CB VAL 29 -3.165 -3.330 -3.762 1.00103.92 C ATOM 235 CG1 VAL 29 -1.701 -3.253 -3.305 1.00103.92 C ATOM 236 CG2 VAL 29 -4.097 -2.291 -3.119 1.00103.92 C ATOM 237 C VAL 29 -2.509 -1.890 -5.600 1.00103.92 C ATOM 238 O VAL 29 -1.300 -1.842 -5.819 1.00103.92 O ATOM 239 N GLU 30 -3.300 -0.807 -5.673 1.00 83.48 N ATOM 240 CA GLU 30 -2.746 0.477 -5.964 1.00 83.48 C ATOM 241 CB GLU 30 -3.467 1.159 -7.139 1.00 83.48 C ATOM 242 CG GLU 30 -2.928 2.534 -7.528 1.00 83.48 C ATOM 243 CD GLU 30 -3.768 3.023 -8.701 1.00 83.48 C ATOM 244 OE1 GLU 30 -5.001 2.761 -8.688 1.00 83.48 O ATOM 245 OE2 GLU 30 -3.193 3.652 -9.629 1.00 83.48 O ATOM 246 C GLU 30 -2.983 1.279 -4.734 1.00 83.48 C ATOM 247 O GLU 30 -4.125 1.441 -4.309 1.00 83.48 O ATOM 248 N VAL 31 -1.907 1.792 -4.111 1.00 42.07 N ATOM 249 CA VAL 31 -2.125 2.554 -2.920 1.00 42.07 C ATOM 250 CB VAL 31 -1.275 2.127 -1.761 1.00 42.07 C ATOM 251 CG1 VAL 31 -1.534 3.112 -0.612 1.00 42.07 C ATOM 252 CG2 VAL 31 -1.583 0.657 -1.419 1.00 42.07 C ATOM 253 C VAL 31 -1.786 3.972 -3.223 1.00 42.07 C ATOM 254 O VAL 31 -0.733 4.271 -3.787 1.00 42.07 O ATOM 255 N ARG 32 -2.695 4.900 -2.878 1.00100.70 N ATOM 256 CA ARG 32 -2.347 6.257 -3.144 1.00100.70 C ATOM 257 CB ARG 32 -3.150 6.940 -4.262 1.00100.70 C ATOM 258 CG ARG 32 -4.643 7.089 -3.974 1.00100.70 C ATOM 259 CD ARG 32 -5.361 7.960 -5.009 1.00100.70 C ATOM 260 NE ARG 32 -6.808 7.991 -4.650 1.00100.70 N ATOM 261 CZ ARG 32 -7.748 7.685 -5.592 1.00100.70 C ATOM 262 NH1 ARG 32 -7.363 7.406 -6.871 1.00100.70 N ATOM 263 NH2 ARG 32 -9.069 7.678 -5.252 1.00100.70 N ATOM 264 C ARG 32 -2.596 7.054 -1.915 1.00100.70 C ATOM 265 O ARG 32 -3.652 6.986 -1.289 1.00100.70 O ATOM 266 N CYS 33 -1.583 7.840 -1.532 1.00 98.74 N ATOM 267 CA CYS 33 -1.711 8.729 -0.424 1.00 98.74 C ATOM 268 CB CYS 33 -0.966 8.263 0.835 1.00 98.74 C ATOM 269 SG CYS 33 -1.135 9.438 2.203 1.00 98.74 S ATOM 270 C CYS 33 -1.065 9.992 -0.871 1.00 98.74 C ATOM 271 O CYS 33 0.094 9.982 -1.283 1.00 98.74 O ATOM 272 N SER 34 -1.799 11.121 -0.822 1.00162.08 N ATOM 273 CA SER 34 -1.184 12.336 -1.257 1.00162.08 C ATOM 274 CB SER 34 0.167 12.631 -0.579 1.00162.08 C ATOM 275 OG SER 34 -0.028 12.857 0.804 1.00162.08 O ATOM 276 C SER 34 -0.973 12.203 -2.729 1.00162.08 C ATOM 277 O SER 34 -1.703 11.493 -3.418 1.00162.08 O ATOM 278 N ASP 35 0.027 12.935 -3.246 1.00 97.68 N ATOM 279 CA ASP 35 0.385 12.935 -4.633 1.00 97.68 C ATOM 280 CB ASP 35 1.514 13.925 -4.960 1.00 97.68 C ATOM 281 CG ASP 35 1.815 13.801 -6.451 1.00 97.68 C ATOM 282 OD1 ASP 35 0.847 13.699 -7.252 1.00 97.68 O ATOM 283 OD2 ASP 35 3.023 13.809 -6.808 1.00 97.68 O ATOM 284 C ASP 35 0.893 11.591 -5.044 1.00 97.68 C ATOM 285 O ASP 35 0.623 11.155 -6.162 1.00 97.68 O ATOM 286 N THR 36 1.648 10.894 -4.168 1.00124.07 N ATOM 287 CA THR 36 2.262 9.679 -4.624 1.00124.07 C ATOM 288 CB THR 36 3.436 9.208 -3.820 1.00124.07 C ATOM 289 OG1 THR 36 4.080 8.141 -4.503 1.00124.07 O ATOM 290 CG2 THR 36 2.943 8.730 -2.445 1.00124.07 C ATOM 291 C THR 36 1.299 8.545 -4.693 1.00124.07 C ATOM 292 O THR 36 0.440 8.346 -3.834 1.00124.07 O ATOM 293 N LYS 37 1.471 7.764 -5.775 1.00101.80 N ATOM 294 CA LYS 37 0.714 6.594 -6.062 1.00101.80 C ATOM 295 CB LYS 37 -0.100 6.754 -7.358 1.00101.80 C ATOM 296 CG LYS 37 0.772 7.141 -8.557 1.00101.80 C ATOM 297 CD LYS 37 0.060 7.032 -9.908 1.00101.80 C ATOM 298 CE LYS 37 0.978 7.244 -11.115 1.00101.80 C ATOM 299 NZ LYS 37 1.679 5.983 -11.447 1.00101.80 N ATOM 300 C LYS 37 1.728 5.520 -6.293 1.00101.80 C ATOM 301 O LYS 37 2.619 5.669 -7.126 1.00101.80 O ATOM 302 N TYR 38 1.628 4.412 -5.533 1.00115.08 N ATOM 303 CA TYR 38 2.527 3.307 -5.700 1.00115.08 C ATOM 304 CB TYR 38 3.273 2.840 -4.427 1.00115.08 C ATOM 305 CG TYR 38 4.475 3.667 -4.104 1.00115.08 C ATOM 306 CD1 TYR 38 4.379 4.890 -3.476 1.00115.08 C ATOM 307 CD2 TYR 38 5.723 3.179 -4.418 1.00115.08 C ATOM 308 CE1 TYR 38 5.508 5.617 -3.177 1.00115.08 C ATOM 309 CE2 TYR 38 6.855 3.898 -4.122 1.00115.08 C ATOM 310 CZ TYR 38 6.748 5.117 -3.501 1.00115.08 C ATOM 311 OH TYR 38 7.913 5.850 -3.198 1.00115.08 O ATOM 312 C TYR 38 1.687 2.144 -6.082 1.00115.08 C ATOM 313 O TYR 38 0.556 1.994 -5.625 1.00115.08 O ATOM 314 N THR 39 2.218 1.299 -6.980 1.00108.12 N ATOM 315 CA THR 39 1.506 0.107 -7.307 1.00108.12 C ATOM 316 CB THR 39 1.134 -0.008 -8.755 1.00108.12 C ATOM 317 OG1 THR 39 0.247 -1.100 -8.932 1.00108.12 O ATOM 318 CG2 THR 39 2.400 -0.197 -9.609 1.00108.12 C ATOM 319 C THR 39 2.415 -1.026 -6.981 1.00108.12 C ATOM 320 O THR 39 3.609 -0.984 -7.270 1.00108.12 O ATOM 321 N LEU 40 1.870 -2.073 -6.336 1.00 81.37 N ATOM 322 CA LEU 40 2.687 -3.199 -6.007 1.00 81.37 C ATOM 323 CB LEU 40 2.515 -3.697 -4.557 1.00 81.37 C ATOM 324 CG LEU 40 2.888 -2.633 -3.505 1.00 81.37 C ATOM 325 CD1 LEU 40 1.887 -1.469 -3.528 1.00 81.37 C ATOM 326 CD2 LEU 40 3.082 -3.244 -2.109 1.00 81.37 C ATOM 327 C LEU 40 2.277 -4.295 -6.927 1.00 81.37 C ATOM 328 O LEU 40 1.097 -4.451 -7.237 1.00 81.37 O ATOM 329 N CYS 41 3.261 -5.068 -7.416 1.00 17.97 N ATOM 330 CA CYS 41 2.928 -6.144 -8.294 1.00 17.97 C ATOM 331 CB CYS 41 4.148 -6.776 -8.982 1.00 17.97 C ATOM 332 SG CYS 41 3.674 -8.024 -10.218 1.00 17.97 S ATOM 333 C CYS 41 2.266 -7.215 -7.435 1.00 17.97 C ATOM 334 O CYS 41 2.747 -7.468 -6.297 1.00 17.97 O ATOM 335 OXT CYS 41 1.257 -7.796 -7.914 1.00 17.97 O TER END