####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS337_4 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS337_4.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 38 1 - 38 4.56 7.13 LCS_AVERAGE: 87.69 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 1 - 25 1.78 6.98 LCS_AVERAGE: 45.63 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 2 - 18 0.99 7.02 LCS_AVERAGE: 26.41 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 25 38 3 3 3 4 20 25 26 26 26 28 35 36 36 36 36 37 37 37 37 38 LCS_GDT Q 2 Q 2 17 25 38 9 12 17 20 22 25 26 26 26 28 35 36 36 36 36 37 37 37 37 38 LCS_GDT E 3 E 3 17 25 38 8 12 17 20 23 25 26 26 26 30 35 36 36 36 36 37 37 37 37 38 LCS_GDT T 4 T 4 17 25 38 9 12 17 20 23 25 26 26 26 30 35 36 36 36 36 37 37 37 37 38 LCS_GDT R 5 R 5 17 25 38 9 12 17 20 23 25 26 26 26 30 35 36 36 36 36 37 37 37 37 38 LCS_GDT K 6 K 6 17 25 38 9 12 17 20 23 25 26 26 26 30 35 36 36 36 36 37 37 37 37 38 LCS_GDT K 7 K 7 17 25 38 9 12 17 20 23 25 26 26 26 30 35 36 36 36 36 37 37 37 37 38 LCS_GDT C 8 C 8 17 25 38 9 12 17 20 23 25 26 26 26 30 35 36 36 36 36 37 37 37 37 38 LCS_GDT T 9 T 9 17 25 38 9 12 17 20 23 25 26 26 26 30 35 36 36 36 36 37 37 37 37 38 LCS_GDT E 10 E 10 17 25 38 9 12 17 20 23 25 26 26 26 30 35 36 36 36 36 37 37 37 37 38 LCS_GDT M 11 M 11 17 25 38 5 12 17 20 23 25 26 26 26 30 35 36 36 36 36 37 37 37 37 38 LCS_GDT K 12 K 12 17 25 38 9 12 17 20 23 25 26 26 26 30 35 36 36 36 36 37 37 37 37 38 LCS_GDT K 13 K 13 17 25 38 5 12 17 20 23 25 26 26 26 30 35 36 36 36 36 37 37 37 37 38 LCS_GDT K 14 K 14 17 25 38 5 12 17 20 23 25 26 26 26 30 35 36 36 36 36 37 37 37 37 38 LCS_GDT F 15 F 15 17 25 38 4 6 17 20 23 25 26 26 26 29 35 36 36 36 36 37 37 37 37 38 LCS_GDT K 16 K 16 17 25 38 4 8 17 20 23 25 26 26 26 30 35 36 36 36 36 37 37 37 37 38 LCS_GDT N 17 N 17 17 25 38 8 12 17 20 23 25 26 26 26 30 35 36 36 36 36 37 37 37 37 38 LCS_GDT C 18 C 18 17 25 38 4 7 17 20 23 25 26 26 26 30 35 36 36 36 36 37 37 37 37 38 LCS_GDT E 19 E 19 8 25 38 4 7 8 15 23 25 26 26 26 30 35 36 36 36 36 37 37 37 37 38 LCS_GDT V 20 V 20 8 25 38 8 11 17 20 23 25 26 26 26 30 35 36 36 36 36 37 37 37 37 38 LCS_GDT R 21 R 21 8 25 38 8 11 17 20 23 25 26 26 26 30 35 36 36 36 36 37 37 37 37 38 LCS_GDT C 22 C 22 8 25 38 4 7 16 20 23 25 26 26 26 30 35 36 36 36 36 37 37 37 37 38 LCS_GDT D 23 D 23 8 25 38 3 7 8 19 23 25 26 26 26 30 35 36 36 36 36 37 37 37 37 38 LCS_GDT E 24 E 24 8 25 38 3 7 8 16 23 25 26 26 26 30 35 36 36 36 36 37 37 37 37 38 LCS_GDT S 25 S 25 8 25 38 3 7 8 19 23 25 26 26 26 30 35 36 36 36 36 37 37 37 37 38 LCS_GDT N 26 N 26 3 10 38 3 4 8 9 10 10 13 24 26 30 35 36 36 36 36 37 37 37 37 38 LCS_GDT H 27 H 27 5 10 38 3 4 5 9 10 10 12 17 19 25 35 36 36 36 36 37 37 37 37 38 LCS_GDT C 28 C 28 7 10 38 4 7 8 9 10 10 13 17 23 30 35 36 36 36 36 37 37 37 37 38 LCS_GDT V 29 V 29 7 10 38 4 7 8 9 10 10 13 17 20 30 35 36 36 36 36 37 37 37 37 38 LCS_GDT E 30 E 30 7 10 38 4 7 8 9 10 10 13 17 23 30 35 36 36 36 36 37 37 37 37 38 LCS_GDT V 31 V 31 7 10 38 4 7 8 9 10 10 13 17 20 30 35 36 36 36 36 37 37 37 37 38 LCS_GDT R 32 R 32 7 10 38 4 7 8 9 10 10 12 17 19 30 35 36 36 36 36 37 37 37 37 38 LCS_GDT C 33 C 33 7 10 38 3 7 8 9 10 10 12 17 20 30 35 36 36 36 36 37 37 37 37 38 LCS_GDT S 34 S 34 7 10 38 3 7 8 9 10 10 13 17 21 30 35 36 36 36 36 37 37 37 37 38 LCS_GDT D 35 D 35 3 10 38 3 3 6 9 10 10 13 17 23 29 35 36 36 36 36 37 37 37 37 38 LCS_GDT T 36 T 36 6 7 38 4 5 6 18 23 25 26 26 26 28 35 36 36 36 36 37 37 37 37 38 LCS_GDT K 37 K 37 6 7 38 4 5 6 7 8 9 10 10 20 20 23 25 28 28 32 37 37 37 37 38 LCS_GDT Y 38 Y 38 6 7 38 4 5 6 7 7 7 7 8 8 11 18 18 18 22 26 28 33 34 34 38 LCS_GDT T 39 T 39 6 7 10 4 5 6 7 7 7 7 8 8 9 10 13 13 14 17 20 21 22 24 24 LCS_GDT L 40 L 40 6 7 10 3 5 6 7 7 7 7 8 8 9 9 13 13 14 17 20 20 22 24 24 LCS_GDT C 41 C 41 6 7 10 3 3 6 7 7 7 7 8 8 9 10 13 13 14 14 20 20 22 23 23 LCS_AVERAGE LCS_A: 53.24 ( 26.41 45.63 87.69 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 12 17 20 23 25 26 26 26 30 35 36 36 36 36 37 37 37 37 38 GDT PERCENT_AT 21.95 29.27 41.46 48.78 56.10 60.98 63.41 63.41 63.41 73.17 85.37 87.80 87.80 87.80 87.80 90.24 90.24 90.24 90.24 92.68 GDT RMS_LOCAL 0.33 0.57 0.91 1.10 1.68 1.76 1.85 1.85 1.85 3.56 3.72 3.85 3.85 3.85 3.85 4.11 4.11 4.11 4.11 4.56 GDT RMS_ALL_AT 7.48 7.32 7.15 7.07 6.96 6.95 6.95 6.95 6.95 7.59 7.37 7.38 7.38 7.38 7.38 7.26 7.26 7.26 7.26 7.13 # Checking swapping # possible swapping detected: E 3 E 3 # possible swapping detected: E 10 E 10 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 2.671 0 0.390 0.828 3.874 21.818 22.727 3.874 LGA Q 2 Q 2 2.534 0 0.252 1.069 7.952 45.000 22.626 7.952 LGA E 3 E 3 1.404 0 0.094 0.961 3.447 61.818 50.303 3.265 LGA T 4 T 4 1.370 0 0.034 1.059 3.405 65.455 53.247 3.405 LGA R 5 R 5 1.349 0 0.070 1.093 5.264 65.455 40.165 4.584 LGA K 6 K 6 1.203 0 0.028 0.874 2.904 69.545 57.172 2.904 LGA K 7 K 7 1.327 0 0.050 0.704 1.863 65.455 64.242 0.794 LGA C 8 C 8 1.486 0 0.033 0.061 1.889 61.818 58.182 1.889 LGA T 9 T 9 1.147 0 0.055 1.069 2.858 65.455 56.104 2.858 LGA E 10 E 10 0.612 0 0.067 0.697 1.716 81.818 69.697 1.716 LGA M 11 M 11 1.179 0 0.076 1.226 5.304 69.545 49.318 5.304 LGA K 12 K 12 1.937 0 0.068 0.718 3.063 47.727 40.404 3.063 LGA K 13 K 13 1.566 0 0.044 1.027 2.492 58.182 49.899 2.492 LGA K 14 K 14 0.790 0 0.095 0.786 3.346 74.091 49.293 3.346 LGA F 15 F 15 1.416 0 0.331 0.453 5.927 77.727 32.727 5.927 LGA K 16 K 16 1.184 0 0.136 1.014 3.707 61.818 38.182 3.641 LGA N 17 N 17 1.811 0 0.099 1.386 6.185 51.364 31.364 4.871 LGA C 18 C 18 1.634 0 0.275 1.012 4.245 51.364 43.636 4.245 LGA E 19 E 19 2.241 0 0.313 1.014 3.989 51.364 36.768 3.193 LGA V 20 V 20 1.491 0 0.203 0.229 2.167 61.818 55.325 2.167 LGA R 21 R 21 1.862 0 0.140 0.932 7.809 54.545 23.471 7.809 LGA C 22 C 22 1.740 0 0.132 0.208 2.902 47.727 42.727 2.902 LGA D 23 D 23 2.416 0 0.159 1.027 5.318 31.818 22.955 2.832 LGA E 24 E 24 3.234 0 0.644 1.001 5.772 14.091 32.727 2.625 LGA S 25 S 25 2.631 0 0.621 0.769 4.662 25.455 21.818 4.662 LGA N 26 N 26 7.194 0 0.171 0.857 12.443 0.000 0.000 11.601 LGA H 27 H 27 8.174 0 0.410 1.113 9.562 0.000 0.000 7.502 LGA C 28 C 28 8.187 0 0.218 0.778 8.187 0.000 0.000 5.491 LGA V 29 V 29 8.381 0 0.161 1.139 11.048 0.000 0.000 11.048 LGA E 30 E 30 7.685 0 0.031 0.851 8.992 0.000 0.000 8.048 LGA V 31 V 31 7.996 0 0.044 0.094 8.071 0.000 0.000 7.998 LGA R 32 R 32 7.978 0 0.172 0.886 8.152 0.000 1.322 4.512 LGA C 33 C 33 8.161 0 0.466 0.529 8.953 0.000 0.000 8.808 LGA S 34 S 34 7.506 0 0.534 0.770 8.965 0.000 0.000 6.601 LGA D 35 D 35 6.882 0 0.648 0.836 7.837 0.909 0.455 5.892 LGA T 36 T 36 2.778 0 0.180 1.083 4.743 12.727 17.662 2.975 LGA K 37 K 37 7.525 0 0.069 1.074 14.840 0.000 0.000 14.840 LGA Y 38 Y 38 10.971 0 0.078 1.135 13.084 0.000 0.000 7.555 LGA T 39 T 39 16.706 0 0.148 1.027 21.303 0.000 0.000 18.982 LGA L 40 L 40 17.333 0 0.163 0.924 22.051 0.000 0.000 14.678 LGA C 41 C 41 22.844 0 0.563 1.414 25.061 0.000 0.000 25.061 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 6.852 6.989 7.080 34.047 26.452 13.392 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 26 1.85 57.927 58.230 1.336 LGA_LOCAL RMSD: 1.846 Number of atoms: 26 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 6.949 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 6.852 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.662312 * X + -0.302341 * Y + 0.685517 * Z + 4.643452 Y_new = -0.176624 * X + -0.952182 * Y + -0.249306 * Z + -7.014894 Z_new = 0.728112 * X + 0.044039 * Y + -0.684042 * Z + -2.482622 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.260614 -0.815563 3.077300 [DEG: -14.9321 -46.7283 176.3163 ] ZXZ: 1.221990 2.324086 1.510386 [DEG: 70.0149 133.1603 86.5387 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS337_4 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS337_4.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 26 1.85 58.230 6.85 REMARK ---------------------------------------------------------- MOLECULE T0955TS337_4 PFRMAT TS TARGET T0955 MODEL 4 PARENT N/A ATOM 1 N SER 1 -0.811 -12.536 -0.930 1.00 54.14 N ATOM 2 CA SER 1 -1.270 -12.979 0.407 1.00 54.14 C ATOM 3 CB SER 1 -1.111 -14.504 0.552 1.00 54.14 C ATOM 4 OG SER 1 -1.556 -14.925 1.832 1.00 54.14 O ATOM 5 C SER 1 -0.467 -12.320 1.479 1.00 54.14 C ATOM 6 O SER 1 -0.568 -11.115 1.700 1.00 54.14 O ATOM 7 N GLN 2 0.367 -13.111 2.174 1.00109.04 N ATOM 8 CA GLN 2 1.179 -12.581 3.227 1.00109.04 C ATOM 9 CB GLN 2 2.032 -13.663 3.914 1.00109.04 C ATOM 10 CG GLN 2 3.024 -13.125 4.950 1.00109.04 C ATOM 11 CD GLN 2 4.308 -12.734 4.224 1.00109.04 C ATOM 12 OE1 GLN 2 5.141 -12.003 4.759 1.00109.04 O ATOM 13 NE2 GLN 2 4.474 -13.236 2.972 1.00109.04 N ATOM 14 C GLN 2 2.110 -11.586 2.623 1.00109.04 C ATOM 15 O GLN 2 2.357 -10.522 3.189 1.00109.04 O ATOM 16 N GLU 3 2.631 -11.912 1.430 1.00 64.26 N ATOM 17 CA GLU 3 3.577 -11.075 0.759 1.00 64.26 C ATOM 18 CB GLU 3 4.007 -11.684 -0.586 1.00 64.26 C ATOM 19 CG GLU 3 2.816 -11.917 -1.516 1.00 64.26 C ATOM 20 CD GLU 3 3.283 -12.689 -2.740 1.00 64.26 C ATOM 21 OE1 GLU 3 4.360 -12.343 -3.291 1.00 64.26 O ATOM 22 OE2 GLU 3 2.557 -13.637 -3.146 1.00 64.26 O ATOM 23 C GLU 3 2.941 -9.756 0.468 1.00 64.26 C ATOM 24 O GLU 3 3.529 -8.705 0.717 1.00 64.26 O ATOM 25 N THR 4 1.698 -9.778 -0.038 1.00 99.56 N ATOM 26 CA THR 4 1.055 -8.556 -0.416 1.00 99.56 C ATOM 27 CB THR 4 -0.273 -8.779 -1.073 1.00 99.56 C ATOM 28 OG1 THR 4 -1.155 -9.462 -0.194 1.00 99.56 O ATOM 29 CG2 THR 4 -0.040 -9.604 -2.348 1.00 99.56 C ATOM 30 C THR 4 0.849 -7.686 0.782 1.00 99.56 C ATOM 31 O THR 4 1.084 -6.481 0.723 1.00 99.56 O ATOM 32 N ARG 5 0.416 -8.277 1.910 1.00 48.38 N ATOM 33 CA ARG 5 0.142 -7.487 3.076 1.00 48.38 C ATOM 34 CB ARG 5 -0.352 -8.326 4.265 1.00 48.38 C ATOM 35 CG ARG 5 -1.824 -8.726 4.184 1.00 48.38 C ATOM 36 CD ARG 5 -2.286 -9.559 5.381 1.00 48.38 C ATOM 37 NE ARG 5 -3.774 -9.577 5.356 1.00 48.38 N ATOM 38 CZ ARG 5 -4.463 -8.592 6.000 1.00 48.38 C ATOM 39 NH1 ARG 5 -3.786 -7.627 6.689 1.00 48.38 N ATOM 40 NH2 ARG 5 -5.826 -8.568 5.956 1.00 48.38 N ATOM 41 C ARG 5 1.387 -6.799 3.544 1.00 48.38 C ATOM 42 O ARG 5 1.369 -5.601 3.823 1.00 48.38 O ATOM 43 N LYS 6 2.508 -7.537 3.630 1.00133.46 N ATOM 44 CA LYS 6 3.708 -6.971 4.179 1.00133.46 C ATOM 45 CB LYS 6 4.851 -7.991 4.322 1.00133.46 C ATOM 46 CG LYS 6 5.465 -8.426 2.990 1.00133.46 C ATOM 47 CD LYS 6 6.766 -9.213 3.144 1.00133.46 C ATOM 48 CE LYS 6 7.880 -8.442 3.856 1.00133.46 C ATOM 49 NZ LYS 6 7.702 -8.529 5.322 1.00133.46 N ATOM 50 C LYS 6 4.206 -5.851 3.318 1.00133.46 C ATOM 51 O LYS 6 4.554 -4.785 3.821 1.00133.46 O ATOM 52 N LYS 7 4.244 -6.057 1.990 1.00 94.16 N ATOM 53 CA LYS 7 4.766 -5.045 1.115 1.00 94.16 C ATOM 54 CB LYS 7 4.832 -5.492 -0.355 1.00 94.16 C ATOM 55 CG LYS 7 5.404 -4.414 -1.276 1.00 94.16 C ATOM 56 CD LYS 7 5.796 -4.931 -2.660 1.00 94.16 C ATOM 57 CE LYS 7 4.615 -5.089 -3.618 1.00 94.16 C ATOM 58 NZ LYS 7 5.102 -5.547 -4.938 1.00 94.16 N ATOM 59 C LYS 7 3.884 -3.842 1.177 1.00 94.16 C ATOM 60 O LYS 7 4.355 -2.706 1.186 1.00 94.16 O ATOM 61 N CYS 8 2.567 -4.089 1.241 1.00 48.52 N ATOM 62 CA CYS 8 1.556 -3.075 1.241 1.00 48.52 C ATOM 63 CB CYS 8 0.177 -3.745 1.418 1.00 48.52 C ATOM 64 SG CYS 8 -1.246 -2.627 1.452 1.00 48.52 S ATOM 65 C CYS 8 1.787 -2.158 2.398 1.00 48.52 C ATOM 66 O CYS 8 1.853 -0.938 2.240 1.00 48.52 O ATOM 67 N THR 9 1.950 -2.739 3.597 1.00101.75 N ATOM 68 CA THR 9 2.143 -1.953 4.776 1.00101.75 C ATOM 69 CB THR 9 2.149 -2.765 6.039 1.00101.75 C ATOM 70 OG1 THR 9 2.174 -1.907 7.168 1.00101.75 O ATOM 71 CG2 THR 9 3.384 -3.680 6.044 1.00101.75 C ATOM 72 C THR 9 3.455 -1.247 4.677 1.00101.75 C ATOM 73 O THR 9 3.583 -0.108 5.120 1.00101.75 O ATOM 74 N GLU 10 4.472 -1.904 4.089 1.00 45.49 N ATOM 75 CA GLU 10 5.772 -1.304 4.034 1.00 45.49 C ATOM 76 CB GLU 10 6.786 -2.146 3.236 1.00 45.49 C ATOM 77 CG GLU 10 7.168 -3.492 3.855 1.00 45.49 C ATOM 78 CD GLU 10 8.122 -4.169 2.879 1.00 45.49 C ATOM 79 OE1 GLU 10 7.936 -3.971 1.649 1.00 45.49 O ATOM 80 OE2 GLU 10 9.048 -4.886 3.346 1.00 45.49 O ATOM 81 C GLU 10 5.684 -0.006 3.302 1.00 45.49 C ATOM 82 O GLU 10 6.125 1.030 3.803 1.00 45.49 O ATOM 83 N MET 11 5.085 -0.011 2.098 1.00103.23 N ATOM 84 CA MET 11 5.078 1.210 1.351 0.50103.23 C ATOM 85 CB MET 11 4.503 1.090 -0.069 0.50103.23 C ATOM 86 CG MET 11 4.550 2.434 -0.802 0.50103.23 C ATOM 87 SD MET 11 3.957 2.411 -2.518 1.00103.23 S ATOM 88 CE MET 11 4.187 4.196 -2.760 1.00103.23 C ATOM 89 C MET 11 4.272 2.239 2.070 1.00103.23 C ATOM 90 O MET 11 4.653 3.406 2.138 1.00103.23 O ATOM 91 N LYS 12 3.130 1.819 2.634 1.00 97.71 N ATOM 92 CA LYS 12 2.242 2.724 3.299 1.00 97.71 C ATOM 93 CB LYS 12 1.011 1.990 3.852 1.00 97.71 C ATOM 94 CG LYS 12 0.014 2.888 4.580 1.00 97.71 C ATOM 95 CD LYS 12 -1.326 2.200 4.837 1.00 97.71 C ATOM 96 CE LYS 12 -2.335 3.087 5.563 1.00 97.71 C ATOM 97 NZ LYS 12 -1.914 3.276 6.969 1.00 97.71 N ATOM 98 C LYS 12 2.957 3.327 4.464 1.00 97.71 C ATOM 99 O LYS 12 2.848 4.521 4.733 1.00 97.71 O ATOM 100 N LYS 13 3.740 2.495 5.167 1.00123.84 N ATOM 101 CA LYS 13 4.422 2.885 6.362 1.00123.84 C ATOM 102 CB LYS 13 5.263 1.740 6.954 1.00123.84 C ATOM 103 CG LYS 13 5.969 2.096 8.265 1.00123.84 C ATOM 104 CD LYS 13 6.596 0.886 8.959 1.00123.84 C ATOM 105 CE LYS 13 5.585 -0.196 9.338 1.00123.84 C ATOM 106 NZ LYS 13 5.179 -0.954 8.135 1.00123.84 N ATOM 107 C LYS 13 5.364 3.995 6.051 1.00123.84 C ATOM 108 O LYS 13 5.469 4.952 6.817 1.00123.84 O ATOM 109 N LYS 14 6.073 3.912 4.910 1.00141.76 N ATOM 110 CA LYS 14 7.047 4.928 4.655 1.00141.76 C ATOM 111 CB LYS 14 7.881 4.686 3.381 1.00141.76 C ATOM 112 CG LYS 14 7.084 4.675 2.077 1.00141.76 C ATOM 113 CD LYS 14 7.969 4.637 0.828 1.00141.76 C ATOM 114 CE LYS 14 8.623 3.274 0.583 1.00141.76 C ATOM 115 NZ LYS 14 9.502 2.926 1.720 1.00141.76 N ATOM 116 C LYS 14 6.366 6.256 4.580 1.00141.76 C ATOM 117 O LYS 14 6.809 7.209 5.219 1.00141.76 O ATOM 118 N PHE 15 5.257 6.380 3.827 1.00202.42 N ATOM 119 CA PHE 15 4.646 7.676 3.852 1.00202.42 C ATOM 120 CB PHE 15 4.564 8.391 2.492 1.00202.42 C ATOM 121 CG PHE 15 5.931 8.919 2.215 1.00202.42 C ATOM 122 CD1 PHE 15 6.868 8.152 1.566 1.00202.42 C ATOM 123 CD2 PHE 15 6.275 10.188 2.629 1.00202.42 C ATOM 124 CE1 PHE 15 8.126 8.651 1.320 1.00202.42 C ATOM 125 CE2 PHE 15 7.531 10.691 2.386 1.00202.42 C ATOM 126 CZ PHE 15 8.460 9.920 1.733 1.00202.42 C ATOM 127 C PHE 15 3.275 7.574 4.428 1.00202.42 C ATOM 128 O PHE 15 2.403 6.880 3.912 1.00202.42 O ATOM 129 N LYS 16 3.065 8.309 5.533 1.00196.45 N ATOM 130 CA LYS 16 1.816 8.313 6.226 1.00196.45 C ATOM 131 CB LYS 16 1.852 9.205 7.477 1.00196.45 C ATOM 132 CG LYS 16 0.668 9.011 8.423 1.00196.45 C ATOM 133 CD LYS 16 0.920 9.599 9.816 1.00196.45 C ATOM 134 CE LYS 16 -0.143 9.227 10.849 1.00196.45 C ATOM 135 NZ LYS 16 0.322 9.592 12.206 1.00196.45 N ATOM 136 C LYS 16 0.793 8.865 5.298 1.00196.45 C ATOM 137 O LYS 16 -0.334 8.377 5.236 1.00196.45 O ATOM 138 N ASN 17 1.169 9.902 4.529 1.00 83.53 N ATOM 139 CA ASN 17 0.212 10.469 3.633 1.00 83.53 C ATOM 140 CB ASN 17 0.742 11.660 2.808 1.00 83.53 C ATOM 141 CG ASN 17 1.833 11.178 1.861 1.00 83.53 C ATOM 142 OD1 ASN 17 2.907 10.762 2.290 1.00 83.53 O ATOM 143 ND2 ASN 17 1.544 11.219 0.532 1.00 83.53 N ATOM 144 C ASN 17 -0.173 9.391 2.680 1.00 83.53 C ATOM 145 O ASN 17 -1.344 9.252 2.334 1.00 83.53 O ATOM 146 N CYS 18 0.810 8.580 2.241 1.00 90.72 N ATOM 147 CA CYS 18 0.481 7.559 1.304 1.00 90.72 C ATOM 148 CB CYS 18 1.707 6.908 0.642 1.00 90.72 C ATOM 149 SG CYS 18 1.230 5.578 -0.504 1.00 90.72 S ATOM 150 C CYS 18 -0.229 6.504 2.063 1.00 90.72 C ATOM 151 O CYS 18 0.387 5.566 2.566 1.00 90.72 O ATOM 152 N GLU 19 -1.559 6.646 2.174 1.00111.41 N ATOM 153 CA GLU 19 -2.294 5.630 2.848 1.00111.41 C ATOM 154 CB GLU 19 -3.722 6.056 3.234 1.00111.41 C ATOM 155 CG GLU 19 -4.590 6.478 2.047 1.00111.41 C ATOM 156 CD GLU 19 -5.327 5.262 1.510 1.00111.41 C ATOM 157 OE1 GLU 19 -5.359 4.216 2.211 1.00111.41 O ATOM 158 OE2 GLU 19 -5.881 5.370 0.384 1.00111.41 O ATOM 159 C GLU 19 -2.360 4.508 1.884 1.00111.41 C ATOM 160 O GLU 19 -2.442 4.714 0.676 1.00111.41 O ATOM 161 N VAL 20 -2.278 3.270 2.394 1.00 93.78 N ATOM 162 CA VAL 20 -2.333 2.161 1.505 1.00 93.78 C ATOM 163 CB VAL 20 -1.032 1.424 1.411 1.00 93.78 C ATOM 164 CG1 VAL 20 -1.198 0.254 0.434 1.00 93.78 C ATOM 165 CG2 VAL 20 0.061 2.421 0.989 1.00 93.78 C ATOM 166 C VAL 20 -3.372 1.255 2.072 1.00 93.78 C ATOM 167 O VAL 20 -3.616 1.261 3.275 1.00 93.78 O ATOM 168 N ARG 21 -4.042 0.478 1.207 1.00109.34 N ATOM 169 CA ARG 21 -5.079 -0.371 1.708 1.00109.34 C ATOM 170 CB ARG 21 -6.480 0.215 1.468 1.00109.34 C ATOM 171 CG ARG 21 -7.629 -0.691 1.910 1.00109.34 C ATOM 172 CD ARG 21 -9.002 -0.055 1.691 1.00109.34 C ATOM 173 NE ARG 21 -9.150 1.033 2.698 1.00109.34 N ATOM 174 CZ ARG 21 -9.848 0.797 3.846 1.00109.34 C ATOM 175 NH1 ARG 21 -10.461 -0.408 4.032 1.00109.34 N ATOM 176 NH2 ARG 21 -9.942 1.765 4.804 1.00109.34 N ATOM 177 C ARG 21 -4.992 -1.673 0.987 1.00109.34 C ATOM 178 O ARG 21 -4.440 -1.751 -0.110 1.00109.34 O ATOM 179 N CYS 22 -5.515 -2.744 1.615 1.00 42.21 N ATOM 180 CA CYS 22 -5.518 -4.022 0.971 1.00 42.21 C ATOM 181 CB CYS 22 -5.255 -5.200 1.929 1.00 42.21 C ATOM 182 SG CYS 22 -3.603 -5.139 2.688 1.00 42.21 S ATOM 183 C CYS 22 -6.893 -4.197 0.425 1.00 42.21 C ATOM 184 O CYS 22 -7.866 -4.258 1.177 1.00 42.21 O ATOM 185 N ASP 23 -7.008 -4.251 -0.914 1.00 95.85 N ATOM 186 CA ASP 23 -8.283 -4.412 -1.546 1.00 95.85 C ATOM 187 CB ASP 23 -8.623 -3.265 -2.518 1.00 95.85 C ATOM 188 CG ASP 23 -10.088 -3.374 -2.915 1.00 95.85 C ATOM 189 OD1 ASP 23 -10.921 -3.724 -2.037 1.00 95.85 O ATOM 190 OD2 ASP 23 -10.397 -3.086 -4.103 1.00 95.85 O ATOM 191 C ASP 23 -8.177 -5.655 -2.355 1.00 95.85 C ATOM 192 O ASP 23 -7.156 -5.889 -2.994 1.00 95.85 O ATOM 193 N GLU 24 -9.212 -6.512 -2.337 1.00 56.64 N ATOM 194 CA GLU 24 -9.057 -7.688 -3.128 1.00 56.64 C ATOM 195 CB GLU 24 -9.223 -9.006 -2.353 1.00 56.64 C ATOM 196 CG GLU 24 -8.043 -9.302 -1.429 1.00 56.64 C ATOM 197 CD GLU 24 -8.264 -10.666 -0.794 1.00 56.64 C ATOM 198 OE1 GLU 24 -9.009 -10.741 0.218 1.00 56.64 O ATOM 199 OE2 GLU 24 -7.686 -11.656 -1.319 1.00 56.64 O ATOM 200 C GLU 24 -10.057 -7.683 -4.222 1.00 56.64 C ATOM 201 O GLU 24 -11.248 -7.465 -4.005 1.00 56.64 O ATOM 202 N SER 25 -9.562 -7.895 -5.454 1.00 87.56 N ATOM 203 CA SER 25 -10.441 -8.080 -6.557 1.00 87.56 C ATOM 204 CB SER 25 -9.777 -7.900 -7.931 1.00 87.56 C ATOM 205 OG SER 25 -10.734 -8.116 -8.959 1.00 87.56 O ATOM 206 C SER 25 -10.818 -9.508 -6.413 1.00 87.56 C ATOM 207 O SER 25 -10.386 -10.160 -5.465 1.00 87.56 O ATOM 208 N ASN 26 -11.652 -10.039 -7.315 1.00 72.56 N ATOM 209 CA ASN 26 -11.997 -11.410 -7.116 1.00 72.56 C ATOM 210 CB ASN 26 -12.991 -11.933 -8.163 1.00 72.56 C ATOM 211 CG ASN 26 -13.315 -13.371 -7.800 1.00 72.56 C ATOM 212 OD1 ASN 26 -12.510 -14.277 -8.015 1.00 72.56 O ATOM 213 ND2 ASN 26 -14.529 -13.592 -7.228 1.00 72.56 N ATOM 214 C ASN 26 -10.751 -12.230 -7.215 1.00 72.56 C ATOM 215 O ASN 26 -10.476 -13.061 -6.351 1.00 72.56 O ATOM 216 N HIS 27 -9.937 -11.975 -8.254 1.00103.78 N ATOM 217 CA HIS 27 -8.780 -12.781 -8.497 1.00103.78 C ATOM 218 ND1 HIS 27 -8.923 -10.234 -10.733 1.00103.78 N ATOM 219 CG HIS 27 -7.949 -10.988 -10.114 1.00103.78 C ATOM 220 CB HIS 27 -8.095 -12.456 -9.836 1.00103.78 C ATOM 221 NE2 HIS 27 -7.230 -8.858 -10.315 1.00103.78 N ATOM 222 CD2 HIS 27 -6.924 -10.130 -9.865 1.00103.78 C ATOM 223 CE1 HIS 27 -8.441 -8.973 -10.830 1.00103.78 C ATOM 224 C HIS 27 -7.755 -12.694 -7.411 1.00103.78 C ATOM 225 O HIS 27 -7.318 -13.720 -6.893 1.00103.78 O ATOM 226 N CYS 28 -7.341 -11.490 -6.988 1.00 93.52 N ATOM 227 CA CYS 28 -6.246 -11.574 -6.069 1.00 93.52 C ATOM 228 CB CYS 28 -4.876 -11.473 -6.760 1.00 93.52 C ATOM 229 SG CYS 28 -4.633 -9.858 -7.558 1.00 93.52 S ATOM 230 C CYS 28 -6.300 -10.463 -5.084 1.00 93.52 C ATOM 231 O CYS 28 -7.219 -9.647 -5.079 1.00 93.52 O ATOM 232 N VAL 29 -5.292 -10.449 -4.188 1.00 97.48 N ATOM 233 CA VAL 29 -5.146 -9.410 -3.219 1.00 97.48 C ATOM 234 CB VAL 29 -4.281 -9.789 -2.052 1.00 97.48 C ATOM 235 CG1 VAL 29 -4.983 -10.895 -1.246 1.00 97.48 C ATOM 236 CG2 VAL 29 -2.911 -10.214 -2.596 1.00 97.48 C ATOM 237 C VAL 29 -4.495 -8.274 -3.930 1.00 97.48 C ATOM 238 O VAL 29 -3.663 -8.473 -4.814 1.00 97.48 O ATOM 239 N GLU 30 -4.883 -7.040 -3.569 1.00110.03 N ATOM 240 CA GLU 30 -4.364 -5.885 -4.233 1.00110.03 C ATOM 241 CB GLU 30 -5.449 -5.112 -5.005 1.00110.03 C ATOM 242 CG GLU 30 -4.962 -3.810 -5.644 1.00110.03 C ATOM 243 CD GLU 30 -4.282 -4.145 -6.960 1.00110.03 C ATOM 244 OE1 GLU 30 -3.987 -5.349 -7.185 1.00110.03 O ATOM 245 OE2 GLU 30 -4.054 -3.200 -7.762 1.00110.03 O ATOM 246 C GLU 30 -3.842 -4.944 -3.201 1.00110.03 C ATOM 247 O GLU 30 -4.442 -4.761 -2.142 1.00110.03 O ATOM 248 N VAL 31 -2.683 -4.324 -3.489 1.00 38.17 N ATOM 249 CA VAL 31 -2.177 -3.330 -2.598 1.00 38.17 C ATOM 250 CB VAL 31 -0.694 -3.418 -2.382 1.00 38.17 C ATOM 251 CG1 VAL 31 -0.257 -2.244 -1.487 1.00 38.17 C ATOM 252 CG2 VAL 31 -0.366 -4.807 -1.808 1.00 38.17 C ATOM 253 C VAL 31 -2.468 -2.035 -3.279 1.00 38.17 C ATOM 254 O VAL 31 -2.065 -1.822 -4.422 1.00 38.17 O ATOM 255 N ARG 32 -3.200 -1.134 -2.601 1.00127.81 N ATOM 256 CA ARG 32 -3.524 0.102 -3.246 1.00127.81 C ATOM 257 CB ARG 32 -5.034 0.398 -3.214 1.00127.81 C ATOM 258 CG ARG 32 -5.467 1.647 -3.984 1.00127.81 C ATOM 259 CD ARG 32 -6.969 1.671 -4.286 1.00127.81 C ATOM 260 NE ARG 32 -7.704 1.597 -2.991 1.00127.81 N ATOM 261 CZ ARG 32 -8.063 2.740 -2.339 1.00127.81 C ATOM 262 NH1 ARG 32 -7.769 3.957 -2.880 1.00127.81 N ATOM 263 NH2 ARG 32 -8.735 2.664 -1.153 1.00127.81 N ATOM 264 C ARG 32 -2.792 1.175 -2.519 1.00127.81 C ATOM 265 O ARG 32 -2.984 1.367 -1.321 1.00127.81 O ATOM 266 N CYS 33 -1.923 1.910 -3.239 1.00 36.68 N ATOM 267 CA CYS 33 -1.138 2.914 -2.590 1.00 36.68 C ATOM 268 CB CYS 33 0.377 2.662 -2.701 1.00 36.68 C ATOM 269 SG CYS 33 0.880 1.085 -1.952 1.00 36.68 S ATOM 270 C CYS 33 -1.407 4.218 -3.258 1.00 36.68 C ATOM 271 O CYS 33 -2.124 4.296 -4.254 1.00 36.68 O ATOM 272 N SER 34 -0.841 5.295 -2.684 1.00 96.62 N ATOM 273 CA SER 34 -0.982 6.605 -3.241 1.00 96.62 C ATOM 274 CB SER 34 -1.428 7.669 -2.224 1.00 96.62 C ATOM 275 OG SER 34 -1.543 8.934 -2.860 1.00 96.62 O ATOM 276 C SER 34 0.375 7.001 -3.723 1.00 96.62 C ATOM 277 O SER 34 1.393 6.555 -3.195 1.00 96.62 O ATOM 278 N ASP 35 0.419 7.844 -4.767 1.00256.36 N ATOM 279 CA ASP 35 1.676 8.248 -5.312 1.00256.36 C ATOM 280 CB ASP 35 1.779 8.041 -6.832 1.00256.36 C ATOM 281 CG ASP 35 0.753 8.952 -7.495 1.00256.36 C ATOM 282 OD1 ASP 35 -0.354 9.125 -6.919 1.00256.36 O ATOM 283 OD2 ASP 35 1.066 9.494 -8.588 1.00256.36 O ATOM 284 C ASP 35 1.846 9.713 -5.078 1.00256.36 C ATOM 285 O ASP 35 0.883 10.432 -4.816 1.00256.36 O ATOM 286 N THR 36 3.107 10.176 -5.152 1.00282.90 N ATOM 287 CA THR 36 3.416 11.570 -5.031 1.00282.90 C ATOM 288 CB THR 36 4.483 11.868 -4.019 1.00282.90 C ATOM 289 OG1 THR 36 4.645 13.269 -3.862 1.00282.90 O ATOM 290 CG2 THR 36 5.794 11.224 -4.494 1.00282.90 C ATOM 291 C THR 36 3.921 11.976 -6.377 1.00282.90 C ATOM 292 O THR 36 4.407 11.143 -7.140 1.00282.90 O ATOM 293 N LYS 37 3.796 13.271 -6.723 1.00334.03 N ATOM 294 CA LYS 37 4.185 13.674 -8.041 1.00334.03 C ATOM 295 CB LYS 37 3.543 14.996 -8.507 1.00334.03 C ATOM 296 CG LYS 37 3.575 16.137 -7.482 1.00334.03 C ATOM 297 CD LYS 37 4.964 16.688 -7.147 1.00334.03 C ATOM 298 CE LYS 37 5.641 17.437 -8.295 1.00334.03 C ATOM 299 NZ LYS 37 6.284 16.472 -9.216 1.00334.03 N ATOM 300 C LYS 37 5.669 13.797 -8.158 1.00334.03 C ATOM 301 O LYS 37 6.349 14.326 -7.281 1.00334.03 O ATOM 302 N TYR 38 6.198 13.248 -9.271 1.00317.83 N ATOM 303 CA TYR 38 7.577 13.359 -9.644 1.00317.83 C ATOM 304 CB TYR 38 8.455 12.130 -9.351 1.00317.83 C ATOM 305 CG TYR 38 8.703 12.038 -7.887 1.00317.83 C ATOM 306 CD1 TYR 38 9.509 12.963 -7.266 1.00317.83 C ATOM 307 CD2 TYR 38 8.169 11.010 -7.146 1.00317.83 C ATOM 308 CE1 TYR 38 9.760 12.887 -5.917 1.00317.83 C ATOM 309 CE2 TYR 38 8.418 10.929 -5.797 1.00317.83 C ATOM 310 CZ TYR 38 9.210 11.868 -5.179 1.00317.83 C ATOM 311 OH TYR 38 9.462 11.780 -3.792 1.00317.83 O ATOM 312 C TYR 38 7.587 13.505 -11.128 1.00317.83 C ATOM 313 O TYR 38 6.615 13.167 -11.799 1.00317.83 O ATOM 314 N THR 39 8.688 14.037 -11.686 1.00264.28 N ATOM 315 CA THR 39 8.762 14.116 -13.112 1.00264.28 C ATOM 316 CB THR 39 9.162 15.470 -13.631 1.00264.28 C ATOM 317 OG1 THR 39 9.040 15.508 -15.045 1.00264.28 O ATOM 318 CG2 THR 39 10.611 15.773 -13.211 1.00264.28 C ATOM 319 C THR 39 9.795 13.120 -13.525 1.00264.28 C ATOM 320 O THR 39 10.879 13.058 -12.946 1.00264.28 O ATOM 321 N LEU 40 9.466 12.283 -14.526 1.00246.85 N ATOM 322 CA LEU 40 10.396 11.282 -14.947 1.00246.85 C ATOM 323 CB LEU 40 9.729 10.174 -15.797 1.00246.85 C ATOM 324 CG LEU 40 10.610 8.959 -16.173 1.00246.85 C ATOM 325 CD1 LEU 40 9.775 7.893 -16.896 1.00246.85 C ATOM 326 CD2 LEU 40 11.841 9.346 -17.007 1.00246.85 C ATOM 327 C LEU 40 11.453 11.977 -15.738 1.00246.85 C ATOM 328 O LEU 40 11.166 12.891 -16.510 1.00246.85 O ATOM 329 N CYS 41 12.720 11.574 -15.525 1.00 71.18 N ATOM 330 CA CYS 41 13.800 12.159 -16.258 1.00 71.18 C ATOM 331 CB CYS 41 15.083 12.349 -15.430 1.00 71.18 C ATOM 332 SG CYS 41 16.423 13.098 -16.404 1.00 71.18 S ATOM 333 C CYS 41 14.137 11.172 -17.368 1.00 71.18 C ATOM 334 O CYS 41 15.023 10.306 -17.145 1.00 71.18 O ATOM 335 OXT CYS 41 13.507 11.272 -18.456 1.00 71.18 O TER END