####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS337_2 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS337_2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 37 1 - 37 4.29 8.15 LONGEST_CONTINUOUS_SEGMENT: 37 2 - 38 4.84 7.93 LCS_AVERAGE: 85.60 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 30 5 - 34 1.93 8.89 LCS_AVERAGE: 58.83 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 5 - 23 0.85 9.08 LCS_AVERAGE: 28.91 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 4 5 37 3 4 5 9 11 17 22 25 28 31 33 34 34 34 34 36 36 36 37 37 LCS_GDT Q 2 Q 2 4 5 37 3 4 5 9 11 17 22 27 29 31 33 34 34 34 34 36 36 36 37 37 LCS_GDT E 3 E 3 4 5 37 3 4 5 9 11 17 22 27 29 31 33 34 34 34 34 36 36 36 37 37 LCS_GDT T 4 T 4 4 22 37 3 4 4 9 11 20 26 28 30 31 33 34 34 34 34 36 36 36 37 37 LCS_GDT R 5 R 5 19 30 37 3 8 18 27 27 27 29 29 30 31 33 34 34 34 34 36 36 36 37 37 LCS_GDT K 6 K 6 19 30 37 11 22 25 27 27 28 29 29 30 31 33 34 34 34 34 36 36 36 37 37 LCS_GDT K 7 K 7 19 30 37 13 22 25 27 27 28 29 29 30 31 33 34 34 34 34 36 36 36 37 37 LCS_GDT C 8 C 8 19 30 37 10 22 25 27 27 28 29 29 30 31 33 34 34 34 34 36 36 36 37 37 LCS_GDT T 9 T 9 19 30 37 11 22 25 27 27 28 29 29 30 31 33 34 34 34 34 36 36 36 37 37 LCS_GDT E 10 E 10 19 30 37 13 22 25 27 27 28 29 29 30 31 33 34 34 34 34 36 36 36 37 37 LCS_GDT M 11 M 11 19 30 37 13 22 25 27 27 28 29 29 30 31 33 34 34 34 34 36 36 36 37 37 LCS_GDT K 12 K 12 19 30 37 13 22 25 27 27 28 29 29 30 31 33 34 34 34 34 36 36 36 37 37 LCS_GDT K 13 K 13 19 30 37 7 22 25 27 27 28 29 29 30 31 33 34 34 34 34 36 36 36 37 37 LCS_GDT K 14 K 14 19 30 37 13 22 25 27 27 28 29 29 30 31 33 34 34 34 34 36 36 36 37 37 LCS_GDT F 15 F 15 19 30 37 13 22 25 27 27 28 29 29 30 31 33 34 34 34 34 36 36 36 37 37 LCS_GDT K 16 K 16 19 30 37 10 22 25 27 27 28 29 29 30 31 33 34 34 34 34 36 36 36 37 37 LCS_GDT N 17 N 17 19 30 37 13 22 25 27 27 28 29 29 30 31 33 34 34 34 34 36 36 36 37 37 LCS_GDT C 18 C 18 19 30 37 13 22 25 27 27 28 29 29 30 31 33 34 34 34 34 36 36 36 37 37 LCS_GDT E 19 E 19 19 30 37 13 22 25 27 27 28 29 29 30 31 33 34 34 34 34 36 36 36 37 37 LCS_GDT V 20 V 20 19 30 37 11 22 25 27 27 28 29 29 30 31 33 34 34 34 34 36 36 36 37 37 LCS_GDT R 21 R 21 19 30 37 5 20 25 27 27 28 29 29 30 31 33 34 34 34 34 36 36 36 37 37 LCS_GDT C 22 C 22 19 30 37 4 22 25 27 27 28 29 29 30 31 33 34 34 34 34 36 36 36 37 37 LCS_GDT D 23 D 23 19 30 37 3 22 25 27 27 28 29 29 30 31 33 34 34 34 34 36 36 36 37 37 LCS_GDT E 24 E 24 4 30 37 3 4 10 17 25 28 29 29 30 31 33 34 34 34 34 36 36 36 37 37 LCS_GDT S 25 S 25 4 30 37 3 4 7 9 21 28 29 29 30 31 33 34 34 34 34 36 36 36 37 37 LCS_GDT N 26 N 26 4 30 37 3 4 5 8 11 17 22 28 30 31 33 34 34 34 34 34 36 36 37 37 LCS_GDT H 27 H 27 8 30 37 4 22 25 27 27 28 29 29 30 31 33 34 34 34 34 36 36 36 37 37 LCS_GDT C 28 C 28 8 30 37 13 22 25 27 27 28 29 29 30 31 33 34 34 34 34 36 36 36 37 37 LCS_GDT V 29 V 29 8 30 37 13 22 25 27 27 28 29 29 30 31 33 34 34 34 34 36 36 36 37 37 LCS_GDT E 30 E 30 8 30 37 13 22 25 27 27 28 29 29 30 31 33 34 34 34 34 36 36 36 37 37 LCS_GDT V 31 V 31 8 30 37 13 22 25 27 27 28 29 29 30 31 33 34 34 34 34 36 36 36 37 37 LCS_GDT R 32 R 32 8 30 37 5 10 24 27 27 28 29 29 30 31 33 34 34 34 34 36 36 36 37 37 LCS_GDT C 33 C 33 8 30 37 11 22 25 27 27 28 29 29 30 31 33 34 34 34 34 36 36 36 37 37 LCS_GDT S 34 S 34 8 30 37 3 22 25 27 27 28 29 29 30 31 33 34 34 34 34 36 36 36 37 37 LCS_GDT D 35 D 35 4 10 37 3 3 5 8 14 24 27 29 30 31 31 31 32 34 34 36 36 36 37 37 LCS_GDT T 36 T 36 4 7 37 3 3 5 5 6 9 13 22 24 29 30 31 32 33 34 36 36 36 37 37 LCS_GDT K 37 K 37 5 7 37 3 4 5 5 6 8 9 12 19 24 29 30 32 33 34 36 36 36 37 37 LCS_GDT Y 38 Y 38 5 7 37 4 4 5 6 7 8 9 10 11 12 13 14 14 16 20 23 27 27 33 34 LCS_GDT T 39 T 39 5 7 11 4 4 5 6 7 8 9 10 11 12 13 14 14 16 17 17 19 26 28 34 LCS_GDT L 40 L 40 5 7 11 4 4 5 6 7 8 9 10 10 11 13 13 14 14 17 17 18 20 21 22 LCS_GDT C 41 C 41 5 7 11 4 4 5 6 7 8 9 10 11 11 13 13 14 16 17 17 18 20 21 22 LCS_AVERAGE LCS_A: 57.78 ( 28.91 58.83 85.60 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 13 22 25 27 27 28 29 29 30 31 33 34 34 34 34 36 36 36 37 37 GDT PERCENT_AT 31.71 53.66 60.98 65.85 65.85 68.29 70.73 70.73 73.17 75.61 80.49 82.93 82.93 82.93 82.93 87.80 87.80 87.80 90.24 90.24 GDT RMS_LOCAL 0.36 0.59 0.72 0.90 0.90 1.45 1.51 1.51 1.86 2.17 2.81 3.06 3.06 3.06 3.06 4.19 4.03 4.03 4.29 4.29 GDT RMS_ALL_AT 8.98 8.97 8.99 9.06 9.06 8.85 8.87 8.87 8.85 8.89 8.96 9.03 9.03 9.03 9.03 8.08 8.18 8.18 8.15 8.15 # Checking swapping # possible swapping detected: F 15 F 15 # possible swapping detected: E 19 E 19 # possible swapping detected: E 24 E 24 # possible swapping detected: E 30 E 30 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 11.519 0 0.231 0.692 13.750 0.000 0.000 13.750 LGA Q 2 Q 2 9.409 0 0.238 1.192 10.539 0.000 0.000 8.903 LGA E 3 E 3 9.540 0 0.656 1.068 11.872 0.000 0.000 11.205 LGA T 4 T 4 6.410 0 0.458 1.265 7.662 0.455 1.039 7.662 LGA R 5 R 5 2.571 0 0.633 1.570 13.062 41.818 16.198 13.062 LGA K 6 K 6 1.129 0 0.054 0.910 2.398 70.000 63.030 1.714 LGA K 7 K 7 0.258 0 0.045 0.633 1.486 95.455 84.444 1.486 LGA C 8 C 8 0.597 0 0.029 0.053 0.813 86.364 84.848 0.813 LGA T 9 T 9 0.494 0 0.053 1.039 2.608 95.455 78.182 2.278 LGA E 10 E 10 0.223 0 0.039 1.026 4.937 95.455 68.889 4.937 LGA M 11 M 11 0.433 0 0.083 0.706 3.128 100.000 87.500 3.128 LGA K 12 K 12 0.950 0 0.043 1.071 4.471 73.636 56.566 4.471 LGA K 13 K 13 1.107 0 0.039 0.700 2.432 69.545 64.242 2.432 LGA K 14 K 14 0.682 0 0.099 0.592 2.893 81.818 70.505 2.893 LGA F 15 F 15 0.343 0 0.196 0.273 2.076 95.455 72.727 1.965 LGA K 16 K 16 0.365 0 0.114 0.630 1.511 95.455 82.626 1.511 LGA N 17 N 17 1.012 0 0.039 1.345 3.777 69.545 50.455 3.769 LGA C 18 C 18 0.560 0 0.040 0.134 0.875 86.364 84.848 0.875 LGA E 19 E 19 0.372 0 0.172 0.976 4.087 100.000 71.515 3.700 LGA V 20 V 20 1.010 0 0.045 0.090 1.747 65.909 65.714 1.458 LGA R 21 R 21 1.915 0 0.088 1.113 6.333 50.909 31.405 4.965 LGA C 22 C 22 1.704 0 0.081 0.126 2.756 66.818 57.576 2.756 LGA D 23 D 23 1.050 0 0.150 1.246 5.299 61.818 43.636 3.215 LGA E 24 E 24 3.654 0 0.137 0.690 5.333 13.636 9.899 3.870 LGA S 25 S 25 4.688 0 0.625 0.803 6.340 5.000 3.636 5.911 LGA N 26 N 26 7.090 0 0.639 1.076 10.958 0.909 0.455 8.854 LGA H 27 H 27 0.786 0 0.655 1.256 3.338 60.455 40.909 2.773 LGA C 28 C 28 0.475 0 0.124 0.836 2.826 95.455 81.818 2.826 LGA V 29 V 29 0.916 0 0.139 0.142 1.418 77.727 72.468 1.418 LGA E 30 E 30 0.817 0 0.123 0.908 4.111 74.091 51.919 4.111 LGA V 31 V 31 0.275 0 0.043 1.097 2.576 86.818 72.468 1.971 LGA R 32 R 32 1.931 0 0.303 1.119 6.166 65.909 35.041 4.733 LGA C 33 C 33 0.744 0 0.526 0.571 3.458 57.727 53.939 2.874 LGA S 34 S 34 1.451 0 0.471 0.506 5.600 35.455 36.364 3.507 LGA D 35 D 35 7.566 0 0.677 1.128 12.387 0.455 0.227 12.387 LGA T 36 T 36 11.757 0 0.143 0.166 15.310 0.000 0.000 13.607 LGA K 37 K 37 12.574 0 0.168 1.170 16.526 0.000 0.000 11.615 LGA Y 38 Y 38 19.573 0 0.112 1.163 21.703 0.000 0.000 21.568 LGA T 39 T 39 21.076 0 0.183 1.113 25.408 0.000 0.000 18.992 LGA L 40 L 40 27.118 0 0.198 0.910 32.065 0.000 0.000 29.504 LGA C 41 C 41 29.008 0 0.524 1.131 30.123 0.000 0.000 29.630 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 7.465 7.433 8.201 50.632 41.344 21.286 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 29 1.51 69.512 67.736 1.804 LGA_LOCAL RMSD: 1.508 Number of atoms: 29 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 8.872 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 7.465 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.690891 * X + 0.134326 * Y + -0.710371 * Z + -4.888424 Y_new = -0.404935 * X + -0.885895 * Y + 0.226314 * Z + 5.703715 Z_new = -0.598914 * X + 0.444012 * Y + 0.666450 * Z + 0.470152 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.611453 0.642144 0.587704 [DEG: -149.6252 36.7922 33.6730 ] ZXZ: -1.879216 0.841360 -0.932846 [DEG: -107.6712 48.2064 -53.4482 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS337_2 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS337_2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 29 1.51 67.736 7.46 REMARK ---------------------------------------------------------- MOLECULE T0955TS337_2 PFRMAT TS TARGET T0955 MODEL 2 PARENT N/A ATOM 1 N SER 1 -6.635 -14.449 7.585 1.00 47.39 N ATOM 2 CA SER 1 -6.849 -13.557 8.745 1.00 47.39 C ATOM 3 CB SER 1 -5.822 -13.881 9.847 1.00 47.39 C ATOM 4 OG SER 1 -6.077 -13.123 11.019 1.00 47.39 O ATOM 5 C SER 1 -6.672 -12.145 8.293 1.00 47.39 C ATOM 6 O SER 1 -6.631 -11.871 7.095 1.00 47.39 O ATOM 7 N GLN 2 -6.578 -11.202 9.248 1.00 94.10 N ATOM 8 CA GLN 2 -6.397 -9.825 8.896 1.00 94.10 C ATOM 9 CB GLN 2 -6.447 -8.874 10.109 1.00 94.10 C ATOM 10 CG GLN 2 -5.336 -9.083 11.140 1.00 94.10 C ATOM 11 CD GLN 2 -5.608 -8.128 12.293 1.00 94.10 C ATOM 12 OE1 GLN 2 -4.694 -7.492 12.818 1.00 94.10 O ATOM 13 NE2 GLN 2 -6.901 -8.023 12.701 1.00 94.10 N ATOM 14 C GLN 2 -5.069 -9.716 8.222 1.00 94.10 C ATOM 15 O GLN 2 -4.903 -8.960 7.266 1.00 94.10 O ATOM 16 N GLU 3 -4.089 -10.503 8.703 1.00246.17 N ATOM 17 CA GLU 3 -2.779 -10.487 8.125 1.00246.17 C ATOM 18 CB GLU 3 -1.860 -11.574 8.712 1.00246.17 C ATOM 19 CG GLU 3 -0.449 -11.587 8.125 1.00246.17 C ATOM 20 CD GLU 3 0.273 -12.806 8.684 1.00246.17 C ATOM 21 OE1 GLU 3 -0.306 -13.499 9.563 1.00246.17 O ATOM 22 OE2 GLU 3 1.419 -13.061 8.227 1.00246.17 O ATOM 23 C GLU 3 -2.951 -10.798 6.677 1.00246.17 C ATOM 24 O GLU 3 -3.723 -11.683 6.310 1.00246.17 O ATOM 25 N THR 4 -2.245 -10.055 5.805 1.00201.56 N ATOM 26 CA THR 4 -2.403 -10.331 4.412 1.00201.56 C ATOM 27 CB THR 4 -3.479 -9.505 3.768 1.00201.56 C ATOM 28 OG1 THR 4 -4.668 -9.594 4.542 1.00201.56 O ATOM 29 CG2 THR 4 -3.784 -10.106 2.381 1.00201.56 C ATOM 30 C THR 4 -1.079 -10.054 3.761 1.00201.56 C ATOM 31 O THR 4 -0.034 -10.437 4.285 1.00201.56 O ATOM 32 N ARG 5 -1.083 -9.389 2.591 1.00296.61 N ATOM 33 CA ARG 5 0.133 -9.161 1.871 1.00296.61 C ATOM 34 CB ARG 5 -0.065 -8.532 0.484 1.00296.61 C ATOM 35 CG ARG 5 1.244 -8.420 -0.297 1.00296.61 C ATOM 36 CD ARG 5 1.820 -9.784 -0.680 1.00296.61 C ATOM 37 NE ARG 5 3.173 -9.559 -1.258 1.00296.61 N ATOM 38 CZ ARG 5 4.165 -10.464 -1.010 1.00296.61 C ATOM 39 NH1 ARG 5 3.902 -11.573 -0.258 1.00296.61 N ATOM 40 NH2 ARG 5 5.415 -10.262 -1.521 1.00296.61 N ATOM 41 C ARG 5 1.007 -8.250 2.667 1.00296.61 C ATOM 42 O ARG 5 0.541 -7.364 3.380 1.00296.61 O ATOM 43 N LYS 6 2.325 -8.502 2.559 1.00126.25 N ATOM 44 CA LYS 6 3.375 -7.806 3.241 1.00126.25 C ATOM 45 CB LYS 6 4.739 -8.472 3.002 1.00126.25 C ATOM 46 CG LYS 6 5.895 -7.801 3.740 1.00126.25 C ATOM 47 CD LYS 6 7.180 -8.630 3.720 1.00126.25 C ATOM 48 CE LYS 6 7.661 -8.965 2.307 1.00126.25 C ATOM 49 NZ LYS 6 8.913 -9.750 2.373 1.00126.25 N ATOM 50 C LYS 6 3.483 -6.390 2.760 1.00126.25 C ATOM 51 O LYS 6 3.744 -5.480 3.544 1.00126.25 O ATOM 52 N LYS 7 3.270 -6.167 1.451 1.00127.28 N ATOM 53 CA LYS 7 3.501 -4.889 0.836 1.00127.28 C ATOM 54 CB LYS 7 3.188 -4.906 -0.671 1.00127.28 C ATOM 55 CG LYS 7 3.474 -3.581 -1.381 1.00127.28 C ATOM 56 CD LYS 7 3.433 -3.684 -2.907 1.00127.28 C ATOM 57 CE LYS 7 4.555 -4.542 -3.495 1.00127.28 C ATOM 58 NZ LYS 7 4.268 -5.976 -3.264 1.00127.28 N ATOM 59 C LYS 7 2.656 -3.822 1.460 1.00127.28 C ATOM 60 O LYS 7 3.130 -2.708 1.679 1.00127.28 O ATOM 61 N CYS 8 1.389 -4.130 1.781 1.00 34.74 N ATOM 62 CA CYS 8 0.511 -3.111 2.279 1.00 34.74 C ATOM 63 CB CYS 8 -0.900 -3.642 2.587 1.00 34.74 C ATOM 64 SG CYS 8 -2.039 -2.323 3.096 1.00 34.74 S ATOM 65 C CYS 8 1.065 -2.548 3.549 1.00 34.74 C ATOM 66 O CYS 8 1.083 -1.331 3.741 1.00 34.74 O ATOM 67 N THR 9 1.550 -3.420 4.450 1.00102.51 N ATOM 68 CA THR 9 2.042 -2.948 5.710 1.00102.51 C ATOM 69 CB THR 9 2.420 -4.044 6.670 1.00102.51 C ATOM 70 OG1 THR 9 2.621 -3.500 7.966 1.00102.51 O ATOM 71 CG2 THR 9 3.705 -4.738 6.185 1.00102.51 C ATOM 72 C THR 9 3.247 -2.101 5.478 1.00102.51 C ATOM 73 O THR 9 3.447 -1.108 6.172 1.00102.51 O ATOM 74 N GLU 10 4.107 -2.495 4.519 1.00124.16 N ATOM 75 CA GLU 10 5.307 -1.752 4.264 1.00124.16 C ATOM 76 CB GLU 10 6.257 -2.472 3.296 1.00124.16 C ATOM 77 CG GLU 10 7.641 -1.828 3.237 1.00124.16 C ATOM 78 CD GLU 10 8.381 -2.207 4.510 1.00124.16 C ATOM 79 OE1 GLU 10 8.973 -3.318 4.534 1.00124.16 O ATOM 80 OE2 GLU 10 8.364 -1.394 5.474 1.00124.16 O ATOM 81 C GLU 10 4.991 -0.410 3.669 1.00124.16 C ATOM 82 O GLU 10 5.514 0.610 4.117 1.00124.16 O ATOM 83 N MET 11 4.099 -0.365 2.659 1.00106.49 N ATOM 84 CA MET 11 3.829 0.867 1.969 1.00106.49 C ATOM 85 CB MET 11 2.821 0.713 0.815 1.00106.49 C ATOM 86 CG MET 11 3.377 0.030 -0.435 1.00106.49 C ATOM 87 SD MET 11 4.477 1.073 -1.440 1.00106.49 S ATOM 88 CE MET 11 4.640 -0.126 -2.793 1.00106.49 C ATOM 89 C MET 11 3.243 1.882 2.897 1.00106.49 C ATOM 90 O MET 11 3.634 3.048 2.872 1.00106.49 O ATOM 91 N LYS 12 2.292 1.478 3.753 1.00 87.92 N ATOM 92 CA LYS 12 1.667 2.450 4.601 1.00 87.92 C ATOM 93 CB LYS 12 0.531 1.873 5.462 1.00 87.92 C ATOM 94 CG LYS 12 -0.130 2.921 6.359 1.00 87.92 C ATOM 95 CD LYS 12 -1.491 2.497 6.912 1.00 87.92 C ATOM 96 CE LYS 12 -2.657 2.859 5.989 1.00 87.92 C ATOM 97 NZ LYS 12 -2.819 4.330 5.926 1.00 87.92 N ATOM 98 C LYS 12 2.704 3.019 5.517 1.00 87.92 C ATOM 99 O LYS 12 2.644 4.191 5.883 1.00 87.92 O ATOM 100 N LYS 13 3.665 2.182 5.948 1.00 84.53 N ATOM 101 CA LYS 13 4.709 2.618 6.833 1.00 84.53 C ATOM 102 CB LYS 13 5.691 1.496 7.208 1.00 84.53 C ATOM 103 CG LYS 13 5.079 0.275 7.889 1.00 84.53 C ATOM 104 CD LYS 13 6.041 -0.914 7.874 1.00 84.53 C ATOM 105 CE LYS 13 5.397 -2.255 8.218 1.00 84.53 C ATOM 106 NZ LYS 13 6.371 -3.346 7.990 1.00 84.53 N ATOM 107 C LYS 13 5.561 3.615 6.120 1.00 84.53 C ATOM 108 O LYS 13 5.914 4.654 6.675 1.00 84.53 O ATOM 109 N LYS 14 5.929 3.297 4.863 1.00 44.96 N ATOM 110 CA LYS 14 6.799 4.150 4.113 1.00 44.96 C ATOM 111 CB LYS 14 7.149 3.565 2.736 1.00 44.96 C ATOM 112 CG LYS 14 8.020 2.311 2.837 1.00 44.96 C ATOM 113 CD LYS 14 8.085 1.503 1.540 1.00 44.96 C ATOM 114 CE LYS 14 8.973 0.260 1.631 1.00 44.96 C ATOM 115 NZ LYS 14 8.935 -0.487 0.354 1.00 44.96 N ATOM 116 C LYS 14 6.111 5.456 3.908 1.00 44.96 C ATOM 117 O LYS 14 6.696 6.510 4.149 1.00 44.96 O ATOM 118 N PHE 15 4.839 5.414 3.466 1.00 71.92 N ATOM 119 CA PHE 15 4.093 6.624 3.269 1.00 71.92 C ATOM 120 CB PHE 15 3.341 6.653 1.928 1.00 71.92 C ATOM 121 CG PHE 15 4.336 6.588 0.822 1.00 71.92 C ATOM 122 CD1 PHE 15 4.945 7.727 0.348 1.00 71.92 C ATOM 123 CD2 PHE 15 4.654 5.377 0.253 1.00 71.92 C ATOM 124 CE1 PHE 15 5.862 7.657 -0.675 1.00 71.92 C ATOM 125 CE2 PHE 15 5.570 5.300 -0.769 1.00 71.92 C ATOM 126 CZ PHE 15 6.174 6.443 -1.238 1.00 71.92 C ATOM 127 C PHE 15 3.039 6.667 4.334 1.00 71.92 C ATOM 128 O PHE 15 1.913 6.215 4.127 1.00 71.92 O ATOM 129 N LYS 16 3.380 7.241 5.502 1.00135.53 N ATOM 130 CA LYS 16 2.476 7.304 6.614 1.00135.53 C ATOM 131 CB LYS 16 3.152 7.848 7.884 1.00135.53 C ATOM 132 CG LYS 16 3.678 9.276 7.718 1.00135.53 C ATOM 133 CD LYS 16 4.061 9.951 9.037 1.00135.53 C ATOM 134 CE LYS 16 2.864 10.492 9.824 1.00135.53 C ATOM 135 NZ LYS 16 2.186 9.390 10.543 1.00135.53 N ATOM 136 C LYS 16 1.329 8.215 6.298 1.00135.53 C ATOM 137 O LYS 16 0.186 7.939 6.658 1.00135.53 O ATOM 138 N ASN 17 1.624 9.364 5.664 1.00103.59 N ATOM 139 CA ASN 17 0.629 10.339 5.323 1.00103.59 C ATOM 140 CB ASN 17 1.223 11.731 5.030 1.00103.59 C ATOM 141 CG ASN 17 2.212 11.624 3.881 1.00103.59 C ATOM 142 OD1 ASN 17 2.968 10.659 3.782 1.00103.59 O ATOM 143 ND2 ASN 17 2.216 12.655 2.994 1.00103.59 N ATOM 144 C ASN 17 -0.204 9.888 4.158 1.00103.59 C ATOM 145 O ASN 17 -1.384 10.226 4.069 1.00103.59 O ATOM 146 N CYS 18 0.396 9.109 3.235 1.00 74.46 N ATOM 147 CA CYS 18 -0.239 8.690 2.015 1.00 74.46 C ATOM 148 CB CYS 18 0.668 7.882 1.071 1.00 74.46 C ATOM 149 SG CYS 18 1.957 8.837 0.230 1.00 74.46 S ATOM 150 C CYS 18 -1.372 7.764 2.292 1.00 74.46 C ATOM 151 O CYS 18 -1.501 7.193 3.374 1.00 74.46 O ATOM 152 N GLU 19 -2.242 7.620 1.272 1.00120.83 N ATOM 153 CA GLU 19 -3.343 6.716 1.357 1.00120.83 C ATOM 154 CB GLU 19 -4.637 7.282 0.757 1.00120.83 C ATOM 155 CG GLU 19 -5.864 6.436 1.087 1.00120.83 C ATOM 156 CD GLU 19 -6.182 6.653 2.559 1.00120.83 C ATOM 157 OE1 GLU 19 -6.004 7.807 3.033 1.00120.83 O ATOM 158 OE2 GLU 19 -6.601 5.672 3.231 1.00120.83 O ATOM 159 C GLU 19 -2.964 5.523 0.546 1.00120.83 C ATOM 160 O GLU 19 -2.816 5.603 -0.673 1.00120.83 O ATOM 161 N VAL 20 -2.800 4.378 1.230 1.00 57.41 N ATOM 162 CA VAL 20 -2.395 3.171 0.591 1.00 57.41 C ATOM 163 CB VAL 20 -1.432 2.413 1.463 1.00 57.41 C ATOM 164 CG1 VAL 20 -1.111 1.055 0.837 1.00 57.41 C ATOM 165 CG2 VAL 20 -0.196 3.298 1.686 1.00 57.41 C ATOM 166 C VAL 20 -3.628 2.353 0.410 1.00 57.41 C ATOM 167 O VAL 20 -4.178 1.822 1.372 1.00 57.41 O ATOM 168 N ARG 21 -4.088 2.227 -0.849 1.00100.68 N ATOM 169 CA ARG 21 -5.266 1.467 -1.133 1.00100.68 C ATOM 170 CB ARG 21 -5.968 1.931 -2.420 1.00100.68 C ATOM 171 CG ARG 21 -6.639 3.300 -2.292 1.00100.68 C ATOM 172 CD ARG 21 -6.801 4.029 -3.628 1.00100.68 C ATOM 173 NE ARG 21 -7.252 3.043 -4.650 1.00100.68 N ATOM 174 CZ ARG 21 -6.866 3.202 -5.951 1.00100.68 C ATOM 175 NH1 ARG 21 -6.051 4.240 -6.296 1.00100.68 N ATOM 176 NH2 ARG 21 -7.285 2.318 -6.904 1.00100.68 N ATOM 177 C ARG 21 -4.791 0.077 -1.356 1.00100.68 C ATOM 178 O ARG 21 -4.153 -0.222 -2.366 1.00100.68 O ATOM 179 N CYS 22 -5.092 -0.819 -0.403 1.00 43.81 N ATOM 180 CA CYS 22 -4.600 -2.150 -0.541 1.00 43.81 C ATOM 181 CB CYS 22 -3.913 -2.662 0.736 1.00 43.81 C ATOM 182 SG CYS 22 -2.636 -1.516 1.332 1.00 43.81 S ATOM 183 C CYS 22 -5.770 -3.039 -0.779 1.00 43.81 C ATOM 184 O CYS 22 -6.756 -2.998 -0.045 1.00 43.81 O ATOM 185 N ASP 23 -5.704 -3.862 -1.838 1.00 60.59 N ATOM 186 CA ASP 23 -6.775 -4.792 -2.002 1.00 60.59 C ATOM 187 CB ASP 23 -6.673 -5.602 -3.310 1.00 60.59 C ATOM 188 CG ASP 23 -7.981 -6.340 -3.575 1.00 60.59 C ATOM 189 OD1 ASP 23 -8.585 -6.872 -2.607 1.00 60.59 O ATOM 190 OD2 ASP 23 -8.395 -6.374 -4.765 1.00 60.59 O ATOM 191 C ASP 23 -6.568 -5.715 -0.853 1.00 60.59 C ATOM 192 O ASP 23 -5.426 -5.956 -0.470 1.00 60.59 O ATOM 193 N GLU 24 -7.651 -6.238 -0.248 1.00 62.72 N ATOM 194 CA GLU 24 -7.440 -7.086 0.886 1.00 62.72 C ATOM 195 CB GLU 24 -8.743 -7.633 1.498 1.00 62.72 C ATOM 196 CG GLU 24 -9.532 -6.592 2.296 1.00 62.72 C ATOM 197 CD GLU 24 -10.790 -7.261 2.838 1.00 62.72 C ATOM 198 OE1 GLU 24 -11.210 -8.289 2.245 1.00 62.72 O ATOM 199 OE2 GLU 24 -11.353 -6.750 3.843 1.00 62.72 O ATOM 200 C GLU 24 -6.626 -8.247 0.431 1.00 62.72 C ATOM 201 O GLU 24 -5.609 -8.568 1.041 1.00 62.72 O ATOM 202 N SER 25 -7.008 -8.867 -0.700 1.00144.72 N ATOM 203 CA SER 25 -6.249 -9.992 -1.152 1.00144.72 C ATOM 204 CB SER 25 -6.797 -10.640 -2.438 1.00144.72 C ATOM 205 OG SER 25 -5.989 -11.744 -2.819 1.00144.72 O ATOM 206 C SER 25 -4.886 -9.478 -1.448 1.00144.72 C ATOM 207 O SER 25 -4.709 -8.306 -1.775 1.00144.72 O ATOM 208 N ASN 26 -3.865 -10.341 -1.315 1.00233.41 N ATOM 209 CA ASN 26 -2.556 -9.848 -1.598 1.00233.41 C ATOM 210 CB ASN 26 -1.429 -10.851 -1.277 1.00233.41 C ATOM 211 CG ASN 26 -1.622 -12.126 -2.091 1.00233.41 C ATOM 212 OD1 ASN 26 -0.806 -12.458 -2.951 1.00233.41 O ATOM 213 ND2 ASN 26 -2.730 -12.865 -1.819 1.00233.41 N ATOM 214 C ASN 26 -2.537 -9.528 -3.053 1.00233.41 C ATOM 215 O ASN 26 -2.717 -10.399 -3.903 1.00233.41 O ATOM 216 N HIS 27 -2.345 -8.236 -3.372 1.00268.28 N ATOM 217 CA HIS 27 -2.338 -7.823 -4.740 1.00268.28 C ATOM 218 ND1 HIS 27 -5.146 -9.783 -4.928 1.00268.28 N ATOM 219 CG HIS 27 -4.308 -9.053 -5.740 1.00268.28 C ATOM 220 CB HIS 27 -3.734 -7.715 -5.385 1.00268.28 C ATOM 221 NE2 HIS 27 -4.808 -11.004 -6.756 1.00268.28 N ATOM 222 CD2 HIS 27 -4.114 -9.812 -6.853 1.00268.28 C ATOM 223 CE1 HIS 27 -5.414 -10.941 -5.584 1.00268.28 C ATOM 224 C HIS 27 -1.713 -6.476 -4.822 1.00268.28 C ATOM 225 O HIS 27 -0.869 -6.110 -4.006 1.00268.28 O ATOM 226 N CYS 28 -2.124 -5.711 -5.848 1.00124.84 N ATOM 227 CA CYS 28 -1.571 -4.416 -6.095 1.00124.84 C ATOM 228 CB CYS 28 -1.962 -3.826 -7.461 1.00124.84 C ATOM 229 SG CYS 28 -3.746 -3.493 -7.585 1.00124.84 S ATOM 230 C CYS 28 -2.064 -3.478 -5.050 1.00124.84 C ATOM 231 O CYS 28 -3.136 -3.650 -4.471 1.00124.84 O ATOM 232 N VAL 29 -1.241 -2.461 -4.761 1.00 41.16 N ATOM 233 CA VAL 29 -1.616 -1.461 -3.820 1.00 41.16 C ATOM 234 CB VAL 29 -0.714 -1.389 -2.632 1.00 41.16 C ATOM 235 CG1 VAL 29 -1.121 -0.142 -1.842 1.00 41.16 C ATOM 236 CG2 VAL 29 -0.823 -2.700 -1.834 1.00 41.16 C ATOM 237 C VAL 29 -1.489 -0.159 -4.528 1.00 41.16 C ATOM 238 O VAL 29 -0.539 0.057 -5.279 1.00 41.16 O ATOM 239 N GLU 30 -2.461 0.744 -4.316 1.00 76.83 N ATOM 240 CA GLU 30 -2.398 2.022 -4.956 1.00 76.83 C ATOM 241 CB GLU 30 -3.729 2.419 -5.619 1.00 76.83 C ATOM 242 CG GLU 30 -4.110 1.566 -6.830 1.00 76.83 C ATOM 243 CD GLU 30 -3.702 2.323 -8.085 1.00 76.83 C ATOM 244 OE1 GLU 30 -3.091 3.416 -7.946 1.00 76.83 O ATOM 245 OE2 GLU 30 -4.006 1.823 -9.200 1.00 76.83 O ATOM 246 C GLU 30 -2.157 3.018 -3.875 1.00 76.83 C ATOM 247 O GLU 30 -3.012 3.225 -3.017 1.00 76.83 O ATOM 248 N VAL 31 -0.982 3.672 -3.881 1.00 98.22 N ATOM 249 CA VAL 31 -0.738 4.625 -2.842 1.00 98.22 C ATOM 250 CB VAL 31 0.421 4.277 -1.951 1.00 98.22 C ATOM 251 CG1 VAL 31 1.708 4.281 -2.794 1.00 98.22 C ATOM 252 CG2 VAL 31 0.460 5.280 -0.784 1.00 98.22 C ATOM 253 C VAL 31 -0.394 5.919 -3.485 1.00 98.22 C ATOM 254 O VAL 31 0.277 5.959 -4.515 1.00 98.22 O ATOM 255 N ARG 32 -0.893 7.025 -2.910 1.00117.93 N ATOM 256 CA ARG 32 -0.490 8.289 -3.433 1.00117.93 C ATOM 257 CB ARG 32 -1.317 8.778 -4.631 1.00117.93 C ATOM 258 CG ARG 32 -2.819 8.932 -4.392 1.00117.93 C ATOM 259 CD ARG 32 -3.542 9.400 -5.659 1.00117.93 C ATOM 260 NE ARG 32 -4.997 9.519 -5.368 1.00117.93 N ATOM 261 CZ ARG 32 -5.844 9.948 -6.351 1.00117.93 C ATOM 262 NH1 ARG 32 -5.353 10.269 -7.584 1.00117.93 N ATOM 263 NH2 ARG 32 -7.183 10.051 -6.104 1.00117.93 N ATOM 264 C ARG 32 -0.577 9.289 -2.332 1.00117.93 C ATOM 265 O ARG 32 -1.328 9.112 -1.373 1.00117.93 O ATOM 266 N CYS 33 0.251 10.346 -2.428 1.00 75.47 N ATOM 267 CA CYS 33 0.201 11.412 -1.473 1.00 75.47 C ATOM 268 CB CYS 33 1.497 11.678 -0.684 1.00 75.47 C ATOM 269 SG CYS 33 1.616 10.720 0.854 1.00 75.47 S ATOM 270 C CYS 33 -0.102 12.664 -2.215 1.00 75.47 C ATOM 271 O CYS 33 0.457 12.929 -3.278 1.00 75.47 O ATOM 272 N SER 34 -1.030 13.457 -1.653 1.00203.07 N ATOM 273 CA SER 34 -1.437 14.706 -2.218 1.00203.07 C ATOM 274 CB SER 34 -2.292 14.563 -3.489 1.00203.07 C ATOM 275 OG SER 34 -1.525 13.995 -4.541 1.00203.07 O ATOM 276 C SER 34 -2.297 15.333 -1.179 1.00203.07 C ATOM 277 O SER 34 -2.336 14.870 -0.039 1.00203.07 O ATOM 278 N ASP 35 -3.002 16.423 -1.531 1.00229.17 N ATOM 279 CA ASP 35 -3.880 16.979 -0.552 1.00229.17 C ATOM 280 CB ASP 35 -4.640 18.234 -1.017 1.00229.17 C ATOM 281 CG ASP 35 -5.404 18.777 0.184 1.00229.17 C ATOM 282 OD1 ASP 35 -4.969 18.499 1.333 1.00229.17 O ATOM 283 OD2 ASP 35 -6.438 19.465 -0.030 1.00229.17 O ATOM 284 C ASP 35 -4.897 15.916 -0.318 1.00229.17 C ATOM 285 O ASP 35 -5.180 15.115 -1.206 1.00229.17 O ATOM 286 N THR 36 -5.467 15.866 0.897 1.00189.66 N ATOM 287 CA THR 36 -6.407 14.824 1.171 1.00189.66 C ATOM 288 CB THR 36 -6.796 14.730 2.617 1.00189.66 C ATOM 289 OG1 THR 36 -5.648 14.509 3.422 1.00189.66 O ATOM 290 CG2 THR 36 -7.783 13.561 2.781 1.00189.66 C ATOM 291 C THR 36 -7.643 15.111 0.395 1.00189.66 C ATOM 292 O THR 36 -7.972 16.265 0.127 1.00189.66 O ATOM 293 N LYS 37 -8.345 14.039 -0.016 1.00254.38 N ATOM 294 CA LYS 37 -9.564 14.211 -0.739 1.00254.38 C ATOM 295 CB LYS 37 -10.023 12.955 -1.498 1.00254.38 C ATOM 296 CG LYS 37 -9.022 12.453 -2.538 1.00254.38 C ATOM 297 CD LYS 37 -7.765 11.840 -1.919 1.00254.38 C ATOM 298 CE LYS 37 -8.063 10.636 -1.022 1.00254.38 C ATOM 299 NZ LYS 37 -6.806 10.100 -0.457 1.00254.38 N ATOM 300 C LYS 37 -10.604 14.493 0.286 1.00254.38 C ATOM 301 O LYS 37 -10.463 14.106 1.445 1.00254.38 O ATOM 302 N TYR 38 -11.680 15.198 -0.105 1.00229.45 N ATOM 303 CA TYR 38 -12.689 15.463 0.871 1.00229.45 C ATOM 304 CB TYR 38 -13.652 16.603 0.490 1.00229.45 C ATOM 305 CG TYR 38 -12.886 17.882 0.438 1.00229.45 C ATOM 306 CD1 TYR 38 -12.163 18.222 -0.683 1.00229.45 C ATOM 307 CD2 TYR 38 -12.901 18.747 1.507 1.00229.45 C ATOM 308 CE1 TYR 38 -11.460 19.402 -0.735 1.00229.45 C ATOM 309 CE2 TYR 38 -12.200 19.929 1.462 1.00229.45 C ATOM 310 CZ TYR 38 -11.480 20.260 0.338 1.00229.45 C ATOM 311 OH TYR 38 -10.762 21.474 0.292 1.00229.45 O ATOM 312 C TYR 38 -13.506 14.222 0.969 1.00229.45 C ATOM 313 O TYR 38 -14.043 13.739 -0.027 1.00229.45 O ATOM 314 N THR 39 -13.604 13.660 2.186 1.00309.04 N ATOM 315 CA THR 39 -14.400 12.487 2.364 1.00309.04 C ATOM 316 CB THR 39 -13.607 11.262 2.725 1.00309.04 C ATOM 317 OG1 THR 39 -12.949 11.445 3.970 1.00309.04 O ATOM 318 CG2 THR 39 -12.577 11.001 1.613 1.00309.04 C ATOM 319 C THR 39 -15.322 12.764 3.498 1.00309.04 C ATOM 320 O THR 39 -14.957 13.434 4.466 1.00309.04 O ATOM 321 N LEU 40 -16.566 12.272 3.394 1.00304.94 N ATOM 322 CA LEU 40 -17.496 12.478 4.460 1.00304.94 C ATOM 323 CB LEU 40 -18.791 13.174 4.015 1.00304.94 C ATOM 324 CG LEU 40 -19.801 13.395 5.156 1.00304.94 C ATOM 325 CD1 LEU 40 -19.243 14.347 6.226 1.00304.94 C ATOM 326 CD2 LEU 40 -21.169 13.836 4.612 1.00304.94 C ATOM 327 C LEU 40 -17.858 11.127 4.971 1.00304.94 C ATOM 328 O LEU 40 -17.878 10.157 4.212 1.00304.94 O ATOM 329 N CYS 41 -18.135 11.031 6.284 1.00 43.39 N ATOM 330 CA CYS 41 -18.496 9.770 6.853 1.00 43.39 C ATOM 331 CB CYS 41 -19.579 9.033 6.049 1.00 43.39 C ATOM 332 SG CYS 41 -21.155 9.938 6.022 1.00 43.39 S ATOM 333 C CYS 41 -17.251 8.891 6.904 1.00 43.39 C ATOM 334 O CYS 41 -16.600 8.695 5.843 1.00 43.39 O ATOM 335 OXT CYS 41 -16.936 8.400 8.020 1.00 43.39 O TER END