####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS309_4 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS309_4.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 1.11 1.11 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 1.11 1.11 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 40 2 - 41 0.95 1.13 LCS_AVERAGE: 96.43 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 21 41 41 3 3 4 22 27 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Q 2 Q 2 40 41 41 5 23 33 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 3 E 3 40 41 41 8 27 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 4 T 4 40 41 41 8 27 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 5 R 5 40 41 41 10 29 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 6 K 6 40 41 41 11 29 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 7 K 7 40 41 41 11 29 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 8 C 8 40 41 41 13 29 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 9 T 9 40 41 41 13 29 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 10 E 10 40 41 41 13 29 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT M 11 M 11 40 41 41 11 29 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 12 K 12 40 41 41 11 29 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 13 K 13 40 41 41 11 29 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 14 K 14 40 41 41 11 29 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT F 15 F 15 40 41 41 11 29 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 16 K 16 40 41 41 3 16 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 17 N 17 40 41 41 10 29 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 18 C 18 40 41 41 13 29 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 19 E 19 40 41 41 13 29 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 20 V 20 40 41 41 9 29 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 21 R 21 40 41 41 13 29 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 22 C 22 40 41 41 11 29 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 23 D 23 40 41 41 6 11 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 24 E 24 40 41 41 3 29 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 25 S 25 40 41 41 13 29 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 26 N 26 40 41 41 13 29 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT H 27 H 27 40 41 41 13 29 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 28 C 28 40 41 41 5 29 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 29 V 29 40 41 41 13 29 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 30 E 30 40 41 41 13 29 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 31 V 31 40 41 41 13 29 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 32 R 32 40 41 41 13 29 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 33 C 33 40 41 41 7 29 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 34 S 34 40 41 41 3 19 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 35 D 35 40 41 41 3 29 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 36 T 36 40 41 41 3 20 36 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 37 K 37 40 41 41 10 29 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Y 38 Y 38 40 41 41 3 23 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 39 T 39 40 41 41 6 29 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT L 40 L 40 40 41 41 9 29 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 41 C 41 40 41 41 6 23 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_AVERAGE LCS_A: 98.81 ( 96.43 100.00 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 13 29 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 41 GDT PERCENT_AT 31.71 70.73 90.24 97.56 97.56 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.33 0.66 0.85 0.95 0.95 1.11 1.11 1.11 1.11 1.11 1.11 1.11 1.11 1.11 1.11 1.11 1.11 1.11 1.11 1.11 GDT RMS_ALL_AT 1.36 1.17 1.14 1.13 1.13 1.11 1.11 1.11 1.11 1.11 1.11 1.11 1.11 1.11 1.11 1.11 1.11 1.11 1.11 1.11 # Checking swapping # possible swapping detected: E 10 E 10 # possible swapping detected: E 19 E 19 # possible swapping detected: D 23 D 23 # possible swapping detected: E 24 E 24 # possible swapping detected: D 35 D 35 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 3.616 0 0.038 0.078 6.384 10.909 10.000 4.087 LGA Q 2 Q 2 1.724 0 0.208 1.341 4.038 62.273 40.202 3.978 LGA E 3 E 3 1.285 0 0.058 0.718 4.940 65.455 37.374 4.940 LGA T 4 T 4 1.159 0 0.025 1.131 3.295 73.636 61.299 3.295 LGA R 5 R 5 0.632 0 0.021 0.333 2.784 81.818 63.636 2.784 LGA K 6 K 6 0.381 0 0.024 1.259 6.706 86.364 53.131 6.637 LGA K 7 K 7 0.781 0 0.056 0.665 3.087 81.818 56.566 3.087 LGA C 8 C 8 0.740 0 0.028 0.067 0.812 81.818 81.818 0.704 LGA T 9 T 9 0.627 0 0.019 0.098 0.731 81.818 87.013 0.317 LGA E 10 E 10 0.440 0 0.017 0.963 4.472 86.364 54.141 4.472 LGA M 11 M 11 0.947 0 0.051 1.099 4.914 73.636 56.818 4.914 LGA K 12 K 12 1.196 0 0.056 0.628 1.474 65.455 65.455 1.449 LGA K 13 K 13 0.846 0 0.032 0.872 2.282 81.818 73.333 2.282 LGA K 14 K 14 0.732 0 0.089 0.999 6.725 86.364 53.737 6.725 LGA F 15 F 15 0.705 0 0.056 0.381 2.789 86.364 66.281 2.430 LGA K 16 K 16 1.598 0 0.025 0.925 6.478 58.182 33.939 6.478 LGA N 17 N 17 0.333 0 0.258 1.422 4.606 90.909 62.955 4.606 LGA C 18 C 18 0.794 0 0.039 0.051 0.944 81.818 81.818 0.934 LGA E 19 E 19 0.923 0 0.179 0.442 2.579 81.818 66.869 1.307 LGA V 20 V 20 0.817 0 0.062 0.096 1.091 77.727 79.481 0.550 LGA R 21 R 21 0.766 0 0.054 1.232 8.360 86.364 40.000 7.781 LGA C 22 C 22 1.077 0 0.151 0.936 4.526 69.545 57.576 4.526 LGA D 23 D 23 1.545 0 0.302 1.081 3.836 46.364 39.091 2.663 LGA E 24 E 24 0.611 0 0.158 0.542 2.607 86.364 60.808 2.607 LGA S 25 S 25 0.654 0 0.023 0.081 0.875 81.818 81.818 0.875 LGA N 26 N 26 0.591 0 0.158 1.189 4.977 77.727 57.500 4.977 LGA H 27 H 27 0.443 0 0.120 0.299 1.128 90.909 85.636 0.940 LGA C 28 C 28 0.886 0 0.173 0.735 2.499 74.091 66.667 2.499 LGA V 29 V 29 0.444 0 0.046 0.100 1.062 100.000 92.468 0.449 LGA E 30 E 30 0.512 0 0.103 0.643 3.079 90.909 73.535 0.804 LGA V 31 V 31 0.564 0 0.115 0.162 0.979 86.364 84.416 0.979 LGA R 32 R 32 0.918 0 0.102 0.765 2.283 90.909 63.306 1.729 LGA C 33 C 33 0.863 0 0.497 0.890 3.016 61.818 58.485 2.078 LGA S 34 S 34 1.127 0 0.535 0.589 3.871 48.182 56.667 0.915 LGA D 35 D 35 1.285 0 0.217 1.072 5.717 61.818 42.727 5.717 LGA T 36 T 36 1.730 0 0.235 1.135 2.891 55.000 48.052 2.891 LGA K 37 K 37 0.318 0 0.073 1.235 2.469 83.182 69.091 2.469 LGA Y 38 Y 38 1.322 0 0.025 1.343 4.945 82.273 46.364 4.945 LGA T 39 T 39 1.106 0 0.105 0.119 2.275 58.636 57.403 1.331 LGA L 40 L 40 0.704 0 0.149 0.837 3.550 81.818 59.545 3.550 LGA C 41 C 41 1.521 0 0.347 0.987 3.386 61.818 52.727 3.386 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 1.111 1.263 2.189 74.933 60.482 36.585 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 41 1.11 92.073 96.630 3.385 LGA_LOCAL RMSD: 1.111 Number of atoms: 41 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 1.111 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 1.111 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.880791 * X + -0.471504 * Y + -0.043497 * Z + -0.172568 Y_new = 0.369370 * X + -0.626701 * Y + -0.686158 * Z + 2.224622 Z_new = 0.296266 * X + -0.620428 * Y + 0.726151 * Z + 2.587253 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.744507 -0.300781 -0.707046 [DEG: 157.2487 -17.2335 -40.5108 ] ZXZ: -0.063308 0.758089 2.696091 [DEG: -3.6273 43.4353 154.4747 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS309_4 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS309_4.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 41 1.11 96.630 1.11 REMARK ---------------------------------------------------------- MOLECULE T0955TS309_4 PFRMAT TS TARGET T0955 MODEL 4 PARENT 5kvn_A ATOM 1 N SER 1 -4.562 -13.095 0.702 1.00 28.66 N ATOM 2 CA SER 1 -3.166 -13.495 0.648 1.00 25.96 C ATOM 3 C SER 1 -2.287 -12.629 1.541 1.00 22.30 C ATOM 4 O SER 1 -2.307 -11.388 1.456 1.00 20.01 O ATOM 5 CB SER 1 -2.676 -13.435 -0.777 1.00 26.56 C ATOM 6 OG SER 1 -3.372 -14.351 -1.564 1.00 31.51 O ATOM 14 N GLN 2 -1.512 -13.301 2.383 1.00 22.95 N ATOM 15 CA GLN 2 -0.621 -12.658 3.331 1.00 23.20 C ATOM 16 C GLN 2 0.498 -11.860 2.681 1.00 21.36 C ATOM 17 O GLN 2 0.893 -10.829 3.221 1.00 22.66 O ATOM 18 CB GLN 2 -0.032 -13.705 4.277 1.00 27.60 C ATOM 19 CG GLN 2 -1.065 -14.342 5.218 1.00 30.38 C ATOM 20 CD GLN 2 -1.835 -15.510 4.587 1.00 29.12 C ATOM 21 OE1 GLN 2 -1.874 -15.674 3.355 1.00 30.02 O ATOM 22 NE2 GLN 2 -2.452 -16.321 5.429 1.00 32.74 N ATOM 31 N GLU 3 1.002 -12.305 1.532 1.00 22.19 N ATOM 32 CA GLU 3 2.094 -11.586 0.891 1.00 25.19 C ATOM 33 C GLU 3 1.654 -10.195 0.455 1.00 23.37 C ATOM 34 O GLU 3 2.401 -9.227 0.626 1.00 25.04 O ATOM 35 CB GLU 3 2.620 -12.387 -0.297 1.00 29.06 C ATOM 36 CG GLU 3 3.309 -13.694 0.104 1.00 30.68 C ATOM 37 CD GLU 3 2.329 -14.792 0.434 1.00 28.53 C ATOM 38 OE1 GLU 3 1.150 -14.593 0.213 1.00 28.86 O ATOM 39 OE2 GLU 3 2.750 -15.814 0.916 1.00 31.67 O ATOM 46 N THR 4 0.435 -10.085 -0.076 1.00 21.96 N ATOM 47 CA THR 4 -0.092 -8.807 -0.521 1.00 19.89 C ATOM 48 C THR 4 -0.233 -7.885 0.692 1.00 18.26 C ATOM 49 O THR 4 0.103 -6.696 0.618 1.00 18.23 O ATOM 50 CB THR 4 -1.429 -8.972 -1.274 1.00 20.30 C ATOM 51 OG1 THR 4 -1.214 -9.831 -2.436 1.00 25.34 O ATOM 52 CG2 THR 4 -1.890 -7.582 -1.767 1.00 17.67 C ATOM 60 N ARG 5 -0.755 -8.420 1.808 1.00 20.01 N ATOM 61 CA ARG 5 -0.891 -7.613 3.017 1.00 24.46 C ATOM 62 C ARG 5 0.469 -7.123 3.538 1.00 25.19 C ATOM 63 O ARG 5 0.587 -5.971 3.987 1.00 26.01 O ATOM 64 CB ARG 5 -1.611 -8.388 4.104 1.00 27.60 C ATOM 65 CG ARG 5 -3.091 -8.600 3.847 1.00 26.67 C ATOM 66 CD ARG 5 -3.729 -9.403 4.907 1.00 28.28 C ATOM 67 NE ARG 5 -5.167 -9.530 4.695 1.00 27.66 N ATOM 68 CZ ARG 5 -6.013 -10.280 5.427 1.00 28.66 C ATOM 69 NH1 ARG 5 -5.587 -11.009 6.445 1.00 31.67 N ATOM 70 NH2 ARG 5 -7.288 -10.258 5.096 1.00 31.59 N ATOM 84 N LYS 6 1.497 -7.988 3.484 1.00 24.27 N ATOM 85 CA LYS 6 2.834 -7.589 3.919 1.00 25.70 C ATOM 86 C LYS 6 3.369 -6.461 3.042 1.00 24.99 C ATOM 87 O LYS 6 3.956 -5.500 3.556 1.00 25.24 O ATOM 88 CB LYS 6 3.796 -8.777 3.889 1.00 28.03 C ATOM 89 CG LYS 6 3.549 -9.820 4.973 1.00 29.06 C ATOM 90 CD LYS 6 4.497 -11.005 4.827 1.00 29.74 C ATOM 91 CE LYS 6 4.225 -12.071 5.881 1.00 31.05 C ATOM 92 NZ LYS 6 5.115 -13.260 5.715 1.00 31.83 N ATOM 106 N LYS 7 3.149 -6.562 1.721 1.00 25.19 N ATOM 107 CA LYS 7 3.581 -5.527 0.793 1.00 26.12 C ATOM 108 C LYS 7 2.905 -4.203 1.113 1.00 22.03 C ATOM 109 O LYS 7 3.560 -3.156 1.120 1.00 23.08 O ATOM 110 CB LYS 7 3.283 -5.941 -0.652 1.00 25.39 C ATOM 111 CG LYS 7 4.184 -7.047 -1.204 1.00 29.95 C ATOM 112 CD LYS 7 3.780 -7.471 -2.634 1.00 25.80 C ATOM 113 CE LYS 7 4.682 -8.601 -3.146 1.00 30.09 C ATOM 114 NZ LYS 7 4.256 -9.115 -4.486 1.00 30.82 N ATOM 128 N CYS 8 1.603 -4.247 1.430 1.00 19.31 N ATOM 129 CA CYS 8 0.884 -3.032 1.779 1.00 20.17 C ATOM 130 C CYS 8 1.457 -2.394 3.013 1.00 21.51 C ATOM 131 O CYS 8 1.643 -1.175 3.048 1.00 20.53 O ATOM 132 CB CYS 8 -0.596 -3.275 1.992 1.00 23.95 C ATOM 133 SG CYS 8 -1.498 -1.748 2.348 1.00 26.78 S ATOM 139 N THR 9 1.738 -3.200 4.033 1.00 23.08 N ATOM 140 CA THR 9 2.279 -2.680 5.272 1.00 25.14 C ATOM 141 C THR 9 3.606 -1.965 5.030 1.00 21.99 C ATOM 142 O THR 9 3.819 -0.858 5.539 1.00 23.37 O ATOM 143 CB THR 9 2.469 -3.809 6.308 1.00 27.60 C ATOM 144 OG1 THR 9 1.194 -4.399 6.612 1.00 31.83 O ATOM 145 CG2 THR 9 3.081 -3.248 7.593 1.00 31.36 C ATOM 153 N GLU 10 4.503 -2.581 4.252 1.00 20.84 N ATOM 154 CA GLU 10 5.784 -1.936 4.006 1.00 22.91 C ATOM 155 C GLU 10 5.632 -0.649 3.190 1.00 24.22 C ATOM 156 O GLU 10 6.289 0.362 3.487 1.00 26.01 O ATOM 157 CB GLU 10 6.729 -2.899 3.278 1.00 28.99 C ATOM 158 CG GLU 10 7.222 -4.079 4.127 1.00 29.46 C ATOM 159 CD GLU 10 8.051 -3.638 5.301 1.00 27.97 C ATOM 160 OE1 GLU 10 8.894 -2.800 5.123 1.00 30.02 O ATOM 161 OE2 GLU 10 7.835 -4.124 6.395 1.00 30.24 O ATOM 168 N MET 11 4.734 -0.649 2.195 1.00 23.16 N ATOM 169 CA MET 11 4.550 0.549 1.401 1.00 22.62 C ATOM 170 C MET 11 3.947 1.648 2.268 1.00 19.20 C ATOM 171 O MET 11 4.308 2.813 2.110 1.00 18.99 O ATOM 172 CB MET 11 3.690 0.287 0.181 1.00 20.63 C ATOM 173 CG MET 11 3.727 1.426 -0.844 1.00 20.17 C ATOM 174 SD MET 11 2.840 1.075 -2.344 1.00 19.76 S ATOM 175 CE MET 11 3.516 2.230 -3.560 1.00 24.41 C ATOM 185 N LYS 12 3.013 1.285 3.162 1.00 18.66 N ATOM 186 CA LYS 12 2.382 2.243 4.057 1.00 21.62 C ATOM 187 C LYS 12 3.406 2.927 4.944 1.00 24.55 C ATOM 188 O LYS 12 3.342 4.138 5.145 1.00 26.28 O ATOM 189 CB LYS 12 1.300 1.572 4.903 1.00 24.18 C ATOM 190 CG LYS 12 0.537 2.517 5.828 1.00 28.28 C ATOM 191 CD LYS 12 -0.577 1.780 6.559 1.00 28.34 C ATOM 192 CE LYS 12 -1.323 2.703 7.517 1.00 30.90 C ATOM 193 NZ LYS 12 -2.423 1.993 8.231 1.00 32.07 N ATOM 207 N LYS 13 4.352 2.158 5.496 1.00 24.89 N ATOM 208 CA LYS 13 5.389 2.756 6.328 1.00 27.60 C ATOM 209 C LYS 13 6.201 3.787 5.543 1.00 26.01 C ATOM 210 O LYS 13 6.535 4.846 6.077 1.00 29.74 O ATOM 211 CB LYS 13 6.305 1.683 6.912 1.00 27.72 C ATOM 212 CG LYS 13 5.658 0.849 8.025 1.00 29.74 C ATOM 213 CD LYS 13 6.665 -0.075 8.723 1.00 30.60 C ATOM 214 CE LYS 13 7.027 -1.260 7.842 1.00 27.07 C ATOM 215 NZ LYS 13 7.867 -2.273 8.544 1.00 31.51 N ATOM 229 N LYS 14 6.522 3.476 4.277 1.00 25.49 N ATOM 230 CA LYS 14 7.247 4.418 3.424 1.00 27.97 C ATOM 231 C LYS 14 6.414 5.670 3.132 1.00 24.46 C ATOM 232 O LYS 14 6.860 6.807 3.326 1.00 28.53 O ATOM 233 CB LYS 14 7.653 3.755 2.103 1.00 27.72 C ATOM 234 CG LYS 14 8.414 4.671 1.132 1.00 28.15 C ATOM 235 CD LYS 14 8.855 3.919 -0.121 1.00 28.47 C ATOM 236 CE LYS 14 9.553 4.849 -1.108 1.00 29.88 C ATOM 237 NZ LYS 14 10.027 4.124 -2.323 1.00 32.24 N ATOM 251 N PHE 15 5.177 5.470 2.692 1.00 20.60 N ATOM 252 CA PHE 15 4.281 6.565 2.353 1.00 20.43 C ATOM 253 C PHE 15 3.469 6.970 3.577 1.00 20.21 C ATOM 254 O PHE 15 2.241 6.857 3.625 1.00 21.51 O ATOM 255 CB PHE 15 3.411 6.163 1.172 1.00 18.74 C ATOM 256 CG PHE 15 4.188 6.046 -0.105 1.00 20.80 C ATOM 257 CD1 PHE 15 4.678 4.847 -0.522 1.00 20.17 C ATOM 258 CD2 PHE 15 4.431 7.159 -0.889 1.00 24.18 C ATOM 259 CE1 PHE 15 5.385 4.732 -1.690 1.00 23.46 C ATOM 260 CE2 PHE 15 5.140 7.049 -2.053 1.00 26.62 C ATOM 261 CZ PHE 15 5.614 5.833 -2.458 1.00 26.18 C ATOM 271 N LYS 16 4.210 7.497 4.545 1.00 21.73 N ATOM 272 CA LYS 16 3.748 7.876 5.879 1.00 24.79 C ATOM 273 C LYS 16 2.682 8.963 5.905 1.00 26.01 C ATOM 274 O LYS 16 2.001 9.156 6.911 1.00 31.44 O ATOM 275 CB LYS 16 4.944 8.329 6.721 1.00 28.28 C ATOM 276 CG LYS 16 5.590 9.655 6.270 1.00 27.66 C ATOM 277 CD LYS 16 6.812 10.003 7.120 1.00 31.59 C ATOM 278 CE LYS 16 7.429 11.334 6.690 1.00 31.83 C ATOM 279 NZ LYS 16 8.643 11.672 7.490 1.00 31.75 N ATOM 293 N ASN 17 2.587 9.715 4.819 1.00 24.09 N ATOM 294 CA ASN 17 1.668 10.821 4.671 1.00 27.72 C ATOM 295 C ASN 17 0.634 10.591 3.580 1.00 27.01 C ATOM 296 O ASN 17 0.078 11.554 3.042 1.00 30.16 O ATOM 297 CB ASN 17 2.473 12.056 4.374 1.00 28.99 C ATOM 298 CG ASN 17 3.237 11.866 3.099 1.00 26.62 C ATOM 299 OD1 ASN 17 3.510 10.707 2.710 1.00 25.49 O ATOM 300 ND2 ASN 17 3.595 12.941 2.448 1.00 31.75 N ATOM 307 N CYS 18 0.368 9.333 3.245 1.00 25.09 N ATOM 308 CA CYS 18 -0.587 9.022 2.195 1.00 24.46 C ATOM 309 C CYS 18 -1.653 8.032 2.646 1.00 26.67 C ATOM 310 O CYS 18 -1.524 7.393 3.693 1.00 29.53 O ATOM 311 CB CYS 18 0.147 8.412 1.030 1.00 19.83 C ATOM 312 SG CYS 18 1.480 9.431 0.400 1.00 20.84 S ATOM 318 N GLU 19 -2.721 7.910 1.858 1.00 26.23 N ATOM 319 CA GLU 19 -3.722 6.886 2.134 1.00 26.39 C ATOM 320 C GLU 19 -3.283 5.621 1.422 1.00 21.81 C ATOM 321 O GLU 19 -3.156 5.595 0.195 1.00 19.08 O ATOM 322 CB GLU 19 -5.112 7.297 1.658 1.00 27.72 C ATOM 323 CG GLU 19 -6.207 6.272 1.944 1.00 26.90 C ATOM 324 CD GLU 19 -7.528 6.651 1.353 1.00 27.54 C ATOM 325 OE1 GLU 19 -7.613 7.688 0.736 1.00 30.82 O ATOM 326 OE2 GLU 19 -8.469 5.907 1.532 1.00 29.33 O ATOM 333 N VAL 20 -3.020 4.564 2.176 1.00 22.75 N ATOM 334 CA VAL 20 -2.490 3.362 1.553 1.00 19.67 C ATOM 335 C VAL 20 -3.416 2.175 1.784 1.00 21.62 C ATOM 336 O VAL 20 -3.782 1.880 2.927 1.00 25.86 O ATOM 337 CB VAL 20 -1.071 3.095 2.091 1.00 19.28 C ATOM 338 CG1 VAL 20 -0.479 1.844 1.408 1.00 17.87 C ATOM 339 CG2 VAL 20 -0.219 4.384 1.883 1.00 18.74 C ATOM 349 N ARG 21 -3.806 1.509 0.694 1.00 20.91 N ATOM 350 CA ARG 21 -4.730 0.385 0.780 1.00 24.09 C ATOM 351 C ARG 21 -4.223 -0.908 0.129 1.00 23.08 C ATOM 352 O ARG 21 -3.559 -0.903 -0.918 1.00 20.60 O ATOM 353 CB ARG 21 -6.057 0.764 0.128 1.00 27.78 C ATOM 354 CG ARG 21 -6.762 2.024 0.700 1.00 27.54 C ATOM 355 CD ARG 21 -7.333 1.811 2.058 1.00 28.47 C ATOM 356 NE ARG 21 -7.994 3.013 2.564 1.00 26.90 N ATOM 357 CZ ARG 21 -8.589 3.142 3.757 1.00 28.41 C ATOM 358 NH1 ARG 21 -8.641 2.145 4.625 1.00 30.90 N ATOM 359 NH2 ARG 21 -9.122 4.308 4.029 1.00 30.82 N ATOM 373 N CYS 22 -4.599 -2.029 0.745 1.00 25.70 N ATOM 374 CA CYS 22 -4.269 -3.366 0.261 1.00 23.81 C ATOM 375 C CYS 22 -5.335 -3.929 -0.663 1.00 24.46 C ATOM 376 O CYS 22 -6.466 -4.161 -0.233 1.00 28.92 O ATOM 377 CB CYS 22 -4.152 -4.330 1.448 1.00 27.30 C ATOM 378 SG CYS 22 -3.789 -6.022 1.002 1.00 23.55 S ATOM 384 N ASP 23 -4.980 -4.158 -1.921 1.00 22.58 N ATOM 385 CA ASP 23 -5.906 -4.717 -2.887 1.00 25.09 C ATOM 386 C ASP 23 -5.717 -6.219 -2.901 1.00 22.11 C ATOM 387 O ASP 23 -4.759 -6.740 -3.488 1.00 18.60 O ATOM 388 CB ASP 23 -5.697 -4.128 -4.278 1.00 24.55 C ATOM 389 CG ASP 23 -6.699 -4.639 -5.318 1.00 26.34 C ATOM 390 OD1 ASP 23 -7.302 -5.707 -5.131 1.00 26.50 O ATOM 391 OD2 ASP 23 -6.854 -3.985 -6.322 1.00 29.39 O ATOM 396 N GLU 24 -6.623 -6.939 -2.252 1.00 24.32 N ATOM 397 CA GLU 24 -6.473 -8.377 -2.093 1.00 23.29 C ATOM 398 C GLU 24 -6.970 -9.166 -3.308 1.00 24.79 C ATOM 399 O GLU 24 -6.935 -10.399 -3.297 1.00 28.22 O ATOM 400 CB GLU 24 -7.213 -8.855 -0.842 1.00 26.18 C ATOM 401 CG GLU 24 -6.676 -8.296 0.478 1.00 25.14 C ATOM 402 CD GLU 24 -7.404 -8.861 1.674 1.00 27.48 C ATOM 403 OE1 GLU 24 -8.204 -9.739 1.480 1.00 30.02 O ATOM 404 OE2 GLU 24 -7.187 -8.415 2.781 1.00 29.81 O ATOM 411 N SER 25 -7.480 -8.463 -4.331 1.00 23.99 N ATOM 412 CA SER 25 -7.972 -9.138 -5.529 1.00 25.96 C ATOM 413 C SER 25 -6.960 -9.018 -6.662 1.00 25.80 C ATOM 414 O SER 25 -6.709 -9.984 -7.388 1.00 31.36 O ATOM 415 CB SER 25 -9.300 -8.546 -5.979 1.00 28.99 C ATOM 416 OG SER 25 -10.324 -8.777 -5.040 1.00 31.13 O ATOM 422 N ASN 26 -6.335 -7.841 -6.789 1.00 22.79 N ATOM 423 CA ASN 26 -5.360 -7.608 -7.854 1.00 25.70 C ATOM 424 C ASN 26 -3.939 -7.710 -7.318 1.00 25.39 C ATOM 425 O ASN 26 -2.971 -7.350 -7.984 1.00 29.06 O ATOM 426 CB ASN 26 -5.575 -6.258 -8.505 1.00 28.22 C ATOM 427 CG ASN 26 -6.872 -6.169 -9.250 1.00 29.19 C ATOM 428 OD1 ASN 26 -7.086 -6.848 -10.266 1.00 32.24 O ATOM 429 ND2 ASN 26 -7.755 -5.336 -8.758 1.00 30.90 N ATOM 436 N HIS 27 -3.819 -8.175 -6.086 1.00 21.77 N ATOM 437 CA HIS 27 -2.547 -8.403 -5.415 1.00 22.62 C ATOM 438 C HIS 27 -1.573 -7.251 -5.525 1.00 21.92 C ATOM 439 O HIS 27 -0.434 -7.403 -5.978 1.00 24.60 O ATOM 440 CB HIS 27 -1.970 -9.723 -5.867 1.00 28.09 C ATOM 441 CG HIS 27 -2.937 -10.771 -5.501 1.00 27.13 C ATOM 442 ND1 HIS 27 -3.196 -11.118 -4.180 1.00 26.18 N ATOM 443 CD2 HIS 27 -3.766 -11.518 -6.260 1.00 29.46 C ATOM 444 CE1 HIS 27 -4.146 -12.042 -4.163 1.00 27.60 C ATOM 445 NE2 HIS 27 -4.499 -12.300 -5.408 1.00 30.02 N ATOM 453 N CYS 28 -2.036 -6.084 -5.123 1.00 19.46 N ATOM 454 CA CYS 28 -1.212 -4.891 -5.227 1.00 19.89 C ATOM 455 C CYS 28 -1.527 -3.855 -4.160 1.00 18.66 C ATOM 456 O CYS 28 -2.496 -3.974 -3.404 1.00 18.18 O ATOM 457 CB CYS 28 -1.356 -4.286 -6.625 1.00 24.65 C ATOM 458 SG CYS 28 -3.012 -3.740 -7.025 1.00 28.28 S ATOM 464 N VAL 29 -0.690 -2.837 -4.089 1.00 18.12 N ATOM 465 CA VAL 29 -0.870 -1.811 -3.089 1.00 16.98 C ATOM 466 C VAL 29 -1.069 -0.452 -3.729 1.00 18.31 C ATOM 467 O VAL 29 -0.250 -0.000 -4.534 1.00 18.69 O ATOM 468 CB VAL 29 0.359 -1.753 -2.200 1.00 15.72 C ATOM 469 CG1 VAL 29 0.125 -0.712 -1.109 1.00 15.56 C ATOM 470 CG2 VAL 29 0.698 -3.145 -1.695 1.00 16.33 C ATOM 480 N GLU 30 -2.166 0.196 -3.350 1.00 19.31 N ATOM 481 CA GLU 30 -2.532 1.507 -3.877 1.00 19.92 C ATOM 482 C GLU 30 -2.226 2.656 -2.924 1.00 17.17 C ATOM 483 O GLU 30 -2.672 2.654 -1.772 1.00 16.65 O ATOM 484 CB GLU 30 -4.031 1.515 -4.206 1.00 23.37 C ATOM 485 CG GLU 30 -4.574 2.833 -4.762 1.00 23.16 C ATOM 486 CD GLU 30 -6.042 2.754 -5.113 1.00 26.84 C ATOM 487 OE1 GLU 30 -6.605 1.701 -4.972 1.00 30.60 O ATOM 488 OE2 GLU 30 -6.611 3.753 -5.514 1.00 27.66 O ATOM 495 N VAL 31 -1.500 3.671 -3.411 1.00 16.50 N ATOM 496 CA VAL 31 -1.206 4.844 -2.590 1.00 15.58 C ATOM 497 C VAL 31 -1.783 6.117 -3.173 1.00 18.18 C ATOM 498 O VAL 31 -1.414 6.553 -4.271 1.00 19.02 O ATOM 499 CB VAL 31 0.300 5.064 -2.463 1.00 15.32 C ATOM 500 CG1 VAL 31 0.614 6.297 -1.626 1.00 15.78 C ATOM 501 CG2 VAL 31 0.917 3.873 -1.883 1.00 15.47 C ATOM 511 N ARG 32 -2.634 6.767 -2.394 1.00 20.14 N ATOM 512 CA ARG 32 -3.240 8.026 -2.796 1.00 24.36 C ATOM 513 C ARG 32 -2.505 9.169 -2.100 1.00 25.39 C ATOM 514 O ARG 32 -2.590 9.356 -0.876 1.00 26.67 O ATOM 515 CB ARG 32 -4.717 8.022 -2.478 1.00 28.03 C ATOM 516 CG ARG 32 -5.487 6.947 -3.208 1.00 27.54 C ATOM 517 CD ARG 32 -6.904 6.893 -2.813 1.00 29.60 C ATOM 518 NE ARG 32 -7.580 5.811 -3.506 1.00 27.84 N ATOM 519 CZ ARG 32 -8.862 5.449 -3.360 1.00 28.22 C ATOM 520 NH1 ARG 32 -9.682 6.078 -2.529 1.00 31.51 N ATOM 521 NH2 ARG 32 -9.281 4.432 -4.088 1.00 31.13 N ATOM 535 N CYS 33 -1.727 9.904 -2.879 1.00 24.32 N ATOM 536 CA CYS 33 -0.843 10.932 -2.360 1.00 22.95 C ATOM 537 C CYS 33 -1.292 12.290 -2.848 1.00 25.86 C ATOM 538 O CYS 33 -1.920 12.402 -3.904 1.00 27.97 O ATOM 539 CB CYS 33 0.568 10.649 -2.824 1.00 21.22 C ATOM 540 SG CYS 33 1.820 11.800 -2.239 1.00 26.96 S ATOM 546 N SER 34 -1.024 13.344 -2.095 1.00 26.90 N ATOM 547 CA SER 34 -1.421 14.630 -2.623 1.00 27.60 C ATOM 548 C SER 34 -0.796 14.831 -4.001 1.00 25.54 C ATOM 549 O SER 34 0.413 14.680 -4.183 1.00 28.73 O ATOM 550 CB SER 34 -0.971 15.742 -1.695 1.00 30.16 C ATOM 551 OG SER 34 -1.598 15.645 -0.443 1.00 32.40 O ATOM 557 N ASP 35 -1.644 15.185 -4.964 1.00 27.48 N ATOM 558 CA ASP 35 -1.299 15.455 -6.358 1.00 28.86 C ATOM 559 C ASP 35 -0.683 14.286 -7.163 1.00 28.79 C ATOM 560 O ASP 35 -0.209 14.509 -8.282 1.00 32.24 O ATOM 561 CB ASP 35 -0.376 16.672 -6.424 1.00 29.33 C ATOM 562 CG ASP 35 -1.056 17.926 -5.863 1.00 28.41 C ATOM 563 OD1 ASP 35 -2.242 18.090 -6.077 1.00 31.13 O ATOM 564 OD2 ASP 35 -0.390 18.700 -5.214 1.00 30.68 O ATOM 569 N THR 36 -0.691 13.054 -6.631 1.00 26.12 N ATOM 570 CA THR 36 -0.150 11.918 -7.389 1.00 26.50 C ATOM 571 C THR 36 -0.657 10.532 -6.961 1.00 25.44 C ATOM 572 O THR 36 -1.574 10.381 -6.146 1.00 26.45 O ATOM 573 CB THR 36 1.391 11.935 -7.397 1.00 27.78 C ATOM 574 OG1 THR 36 1.876 10.957 -8.332 1.00 30.02 O ATOM 575 CG2 THR 36 1.936 11.630 -6.053 1.00 26.39 C ATOM 583 N LYS 37 -0.060 9.499 -7.548 1.00 26.28 N ATOM 584 CA LYS 37 -0.465 8.129 -7.246 1.00 24.65 C ATOM 585 C LYS 37 0.684 7.143 -7.401 1.00 25.04 C ATOM 586 O LYS 37 1.470 7.235 -8.348 1.00 30.16 O ATOM 587 CB LYS 37 -1.641 7.724 -8.148 1.00 28.99 C ATOM 588 CG LYS 37 -2.273 6.355 -7.841 1.00 27.48 C ATOM 589 CD LYS 37 -3.510 6.103 -8.710 1.00 31.05 C ATOM 590 CE LYS 37 -4.156 4.762 -8.376 1.00 28.53 C ATOM 591 NZ LYS 37 -5.369 4.499 -9.207 1.00 31.91 N ATOM 605 N TYR 38 0.753 6.167 -6.494 1.00 22.38 N ATOM 606 CA TYR 38 1.784 5.136 -6.610 1.00 25.29 C ATOM 607 C TYR 38 1.162 3.744 -6.534 1.00 24.09 C ATOM 608 O TYR 38 0.175 3.532 -5.823 1.00 21.33 O ATOM 609 CB TYR 38 2.825 5.274 -5.495 1.00 25.09 C ATOM 610 CG TYR 38 3.442 6.620 -5.404 1.00 24.79 C ATOM 611 CD1 TYR 38 2.855 7.585 -4.589 1.00 21.08 C ATOM 612 CD2 TYR 38 4.576 6.912 -6.118 1.00 29.67 C ATOM 613 CE1 TYR 38 3.420 8.826 -4.497 1.00 23.25 C ATOM 614 CE2 TYR 38 5.135 8.160 -6.027 1.00 29.53 C ATOM 615 CZ TYR 38 4.565 9.113 -5.222 1.00 26.73 C ATOM 616 OH TYR 38 5.141 10.358 -5.139 1.00 30.98 O ATOM 626 N THR 39 1.749 2.785 -7.256 1.00 27.25 N ATOM 627 CA THR 39 1.305 1.392 -7.164 1.00 24.70 C ATOM 628 C THR 39 2.495 0.454 -6.997 1.00 25.54 C ATOM 629 O THR 39 3.491 0.561 -7.717 1.00 30.98 O ATOM 630 CB THR 39 0.467 0.946 -8.393 1.00 29.39 C ATOM 631 OG1 THR 39 -0.682 1.791 -8.526 1.00 30.75 O ATOM 632 CG2 THR 39 -0.032 -0.520 -8.201 1.00 28.66 C ATOM 640 N LEU 40 2.375 -0.474 -6.057 1.00 22.66 N ATOM 641 CA LEU 40 3.392 -1.497 -5.816 1.00 25.04 C ATOM 642 C LEU 40 2.791 -2.882 -5.991 1.00 23.50 C ATOM 643 O LEU 40 1.635 -3.122 -5.641 1.00 20.53 O ATOM 644 CB LEU 40 3.999 -1.306 -4.426 1.00 24.79 C ATOM 645 CG LEU 40 5.082 -2.261 -3.924 1.00 27.13 C ATOM 646 CD1 LEU 40 6.038 -1.463 -3.032 1.00 30.38 C ATOM 647 CD2 LEU 40 4.446 -3.375 -3.093 1.00 25.91 C ATOM 659 N CYS 41 3.549 -3.804 -6.564 1.00 26.56 N ATOM 660 CA CYS 41 3.051 -5.163 -6.718 1.00 24.50 C ATOM 661 C CYS 41 4.202 -6.153 -6.599 1.00 26.96 C ATOM 662 O CYS 41 3.984 -7.362 -6.508 1.00 29.19 O ATOM 663 OXT CYS 41 5.325 -5.725 -6.347 1.00 30.98 O ATOM 664 CB CYS 41 2.333 -5.325 -8.061 1.00 29.19 C ATOM 665 SG CYS 41 1.601 -6.962 -8.327 1.00 31.51 S TER END