####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 334), selected 41 , name T0955TS288_5 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS288_5.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 1 - 20 3.90 23.13 LCS_AVERAGE: 41.23 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 1 - 17 1.86 25.09 LCS_AVERAGE: 23.44 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 2 - 13 1.00 26.31 LCS_AVERAGE: 17.07 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 8 17 20 3 3 12 14 16 16 16 17 18 19 19 19 19 19 19 20 20 20 20 20 LCS_GDT Q 2 Q 2 12 17 20 7 9 14 15 16 16 16 17 18 19 19 19 19 19 19 20 20 20 20 20 LCS_GDT E 3 E 3 12 17 20 7 10 14 15 16 16 16 17 18 19 19 19 19 19 19 20 20 20 20 20 LCS_GDT T 4 T 4 12 17 20 7 10 14 15 16 16 16 17 18 19 19 19 19 19 19 20 20 20 20 20 LCS_GDT R 5 R 5 12 17 20 7 10 14 15 16 16 16 17 18 19 19 19 19 19 19 20 20 20 20 20 LCS_GDT K 6 K 6 12 17 20 7 10 14 15 16 16 16 17 18 19 19 19 19 19 19 20 20 20 20 20 LCS_GDT K 7 K 7 12 17 20 7 10 14 15 16 16 16 17 18 19 19 19 19 19 19 20 20 20 20 20 LCS_GDT C 8 C 8 12 17 20 7 10 14 15 16 16 16 17 18 19 19 19 19 19 19 20 20 20 20 20 LCS_GDT T 9 T 9 12 17 20 5 10 14 15 16 16 16 17 18 19 19 19 19 19 19 20 20 20 20 20 LCS_GDT E 10 E 10 12 17 20 5 10 14 15 16 16 16 17 18 19 19 19 19 19 19 20 20 20 20 20 LCS_GDT M 11 M 11 12 17 20 4 10 14 15 16 16 16 17 18 19 19 19 19 19 19 20 20 20 20 20 LCS_GDT K 12 K 12 12 17 20 4 8 14 15 16 16 16 17 18 19 19 19 19 19 19 20 20 20 20 20 LCS_GDT K 13 K 13 12 17 20 3 8 14 15 16 16 16 17 18 19 19 19 19 19 19 20 20 20 20 20 LCS_GDT K 14 K 14 10 17 20 3 9 14 15 16 16 16 17 18 19 19 19 19 19 19 20 20 20 20 20 LCS_GDT F 15 F 15 10 17 20 5 10 14 15 16 16 16 17 18 19 19 19 19 19 19 20 20 20 20 20 LCS_GDT K 16 K 16 10 17 20 4 6 14 15 16 16 16 17 18 19 19 19 19 19 19 20 20 20 20 20 LCS_GDT N 17 N 17 5 17 20 4 4 5 10 11 12 16 17 18 19 19 19 19 19 19 20 20 20 20 20 LCS_GDT C 18 C 18 5 6 20 4 4 5 6 8 8 12 17 18 19 19 19 19 19 19 20 20 20 20 20 LCS_GDT E 19 E 19 5 6 20 3 3 5 5 7 8 9 11 15 19 19 19 19 19 19 20 20 20 20 20 LCS_GDT V 20 V 20 3 3 20 3 3 4 5 5 5 6 6 9 10 12 13 14 17 18 20 20 20 20 20 LCS_GDT R 21 R 21 3 3 14 3 3 4 5 5 5 6 6 8 10 12 13 14 16 16 16 17 18 18 19 LCS_GDT C 22 C 22 3 3 14 0 3 4 5 5 5 6 6 8 10 12 13 14 16 16 17 17 18 18 19 LCS_GDT D 23 D 23 5 5 15 4 5 5 5 5 5 6 8 9 10 12 13 15 16 16 17 17 18 18 19 LCS_GDT E 24 E 24 5 5 15 4 5 5 5 5 5 6 8 9 10 12 13 15 16 16 17 17 18 18 19 LCS_GDT S 25 S 25 5 5 15 4 5 5 5 5 5 6 8 9 10 12 13 15 16 16 17 17 18 18 19 LCS_GDT N 26 N 26 5 5 15 4 5 5 5 5 5 6 7 8 10 12 13 15 16 16 17 17 18 18 19 LCS_GDT H 27 H 27 5 5 15 4 5 5 5 5 5 6 7 9 10 12 13 15 16 16 17 17 18 18 19 LCS_GDT C 28 C 28 3 4 15 3 3 4 5 5 5 6 8 9 10 12 13 15 16 16 17 17 18 18 19 LCS_GDT V 29 V 29 3 4 15 3 3 3 3 4 4 5 8 9 10 12 13 15 15 15 17 17 18 18 19 LCS_GDT E 30 E 30 3 3 15 3 3 3 3 4 4 6 8 9 10 12 13 15 15 15 17 17 17 17 19 LCS_GDT V 31 V 31 3 3 15 3 4 4 4 4 4 6 8 9 10 12 13 15 15 15 17 17 17 17 18 LCS_GDT R 32 R 32 3 4 15 3 4 4 4 4 4 5 6 9 10 12 13 15 15 15 17 17 17 17 18 LCS_GDT C 33 C 33 5 5 15 3 4 5 5 5 5 5 6 8 10 12 13 15 15 15 17 17 17 17 18 LCS_GDT S 34 S 34 5 5 15 3 4 5 5 5 5 5 6 8 8 10 12 15 15 15 17 17 17 17 18 LCS_GDT D 35 D 35 5 5 15 3 4 5 5 5 5 5 6 8 9 11 13 15 15 15 17 17 17 17 18 LCS_GDT T 36 T 36 5 5 15 3 4 5 5 5 5 5 6 9 10 12 13 15 15 15 17 17 17 17 18 LCS_GDT K 37 K 37 5 5 15 3 4 5 5 5 5 6 8 9 10 12 13 15 15 15 17 17 17 17 18 LCS_GDT Y 38 Y 38 4 4 10 0 4 4 4 4 4 5 6 8 8 9 11 11 14 15 17 17 17 17 18 LCS_GDT T 39 T 39 4 4 10 3 4 4 4 4 4 5 6 8 8 9 10 10 10 10 10 13 14 16 17 LCS_GDT L 40 L 40 4 4 10 3 4 4 4 4 4 4 6 8 8 9 10 10 10 10 10 12 12 12 13 LCS_GDT C 41 C 41 4 4 10 3 4 4 4 4 4 5 5 7 8 9 10 10 10 10 10 11 11 12 13 LCS_AVERAGE LCS_A: 27.25 ( 17.07 23.44 41.23 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 10 14 15 16 16 16 17 18 19 19 19 19 19 19 20 20 20 20 20 GDT PERCENT_AT 17.07 24.39 34.15 36.59 39.02 39.02 39.02 41.46 43.90 46.34 46.34 46.34 46.34 46.34 46.34 48.78 48.78 48.78 48.78 48.78 GDT RMS_LOCAL 0.19 0.79 1.04 1.13 1.26 1.26 1.26 1.86 2.51 3.04 3.04 3.04 3.04 3.04 3.04 3.90 3.90 3.90 3.90 3.90 GDT RMS_ALL_AT 26.99 25.50 25.72 25.77 25.61 25.61 25.61 25.09 24.38 23.75 23.75 23.75 23.75 23.75 23.75 23.13 23.13 23.13 23.13 23.13 # Checking swapping # possible swapping detected: F 15 F 15 # possible swapping detected: E 19 E 19 # possible swapping detected: E 24 E 24 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 1.685 0 0.541 0.654 3.111 46.364 40.303 3.029 LGA Q 2 Q 2 2.310 0 0.201 0.627 7.785 51.364 24.848 7.785 LGA E 3 E 3 0.819 0 0.031 1.084 5.944 82.273 48.889 5.944 LGA T 4 T 4 0.781 0 0.007 1.086 2.870 86.364 71.948 2.870 LGA R 5 R 5 1.224 0 0.049 1.125 5.801 77.727 45.455 5.801 LGA K 6 K 6 1.134 0 0.048 0.666 1.664 77.727 64.444 1.664 LGA K 7 K 7 1.000 0 0.121 0.637 1.818 70.000 69.293 1.091 LGA C 8 C 8 0.793 0 0.112 0.119 1.366 81.818 79.091 1.366 LGA T 9 T 9 0.639 0 0.043 0.085 0.981 81.818 81.818 0.981 LGA E 10 E 10 0.714 0 0.618 0.948 4.486 61.818 48.687 4.486 LGA M 11 M 11 0.583 0 0.108 1.042 2.131 81.818 66.591 2.131 LGA K 12 K 12 2.093 0 0.104 0.616 4.430 42.273 30.909 4.430 LGA K 13 K 13 2.820 0 0.024 0.970 5.391 32.727 20.404 3.982 LGA K 14 K 14 1.411 0 0.043 0.589 4.035 70.000 49.293 2.593 LGA F 15 F 15 0.808 0 0.499 1.307 7.552 61.818 33.223 7.552 LGA K 16 K 16 1.602 0 0.193 0.962 5.739 44.545 26.061 5.739 LGA N 17 N 17 5.101 0 0.081 0.653 8.228 6.818 3.409 6.792 LGA C 18 C 18 8.304 0 0.594 0.659 10.192 0.000 0.000 8.112 LGA E 19 E 19 10.272 0 0.567 1.326 14.519 0.000 0.000 13.166 LGA V 20 V 20 13.216 0 0.611 0.662 16.707 0.000 0.000 14.705 LGA R 21 R 21 19.603 0 0.614 1.511 24.744 0.000 0.000 24.744 LGA C 22 C 22 23.094 0 0.588 1.107 26.459 0.000 0.000 22.862 LGA D 23 D 23 26.999 0 0.560 0.874 30.165 0.000 0.000 23.904 LGA E 24 E 24 32.560 0 0.094 0.706 36.846 0.000 0.000 33.573 LGA S 25 S 25 36.791 0 0.063 0.712 39.611 0.000 0.000 37.639 LGA N 26 N 26 35.800 0 0.145 1.190 37.543 0.000 0.000 32.108 LGA H 27 H 27 35.564 0 0.379 1.185 40.452 0.000 0.000 40.452 LGA C 28 C 28 34.697 0 0.616 0.617 35.779 0.000 0.000 35.779 LGA V 29 V 29 32.372 0 0.599 0.706 32.998 0.000 0.000 30.574 LGA E 30 E 30 31.223 0 0.671 0.741 31.459 0.000 0.000 27.581 LGA V 31 V 31 29.483 0 0.648 0.693 31.467 0.000 0.000 27.989 LGA R 32 R 32 29.365 0 0.579 1.236 32.052 0.000 0.000 32.052 LGA C 33 C 33 26.625 0 0.145 0.210 28.065 0.000 0.000 24.728 LGA S 34 S 34 27.031 0 0.227 0.684 30.859 0.000 0.000 23.190 LGA D 35 D 35 30.829 0 0.136 1.178 34.863 0.000 0.000 30.935 LGA T 36 T 36 33.003 0 0.622 0.724 35.299 0.000 0.000 29.920 LGA K 37 K 37 37.042 0 0.651 1.560 40.538 0.000 0.000 37.799 LGA Y 38 Y 38 41.194 0 0.577 1.302 44.005 0.000 0.000 39.800 LGA T 39 T 39 46.024 0 0.128 0.149 48.658 0.000 0.000 46.014 LGA L 40 L 40 47.789 0 0.625 1.264 49.650 0.000 0.000 44.227 LGA C 41 C 41 53.696 1 0.516 0.605 56.910 0.000 0.000 56.910 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 334 99.70 41 41 SUMMARY(RMSD_GDC): 14.581 14.567 15.127 25.787 19.626 9.667 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 17 1.86 37.805 35.673 0.868 LGA_LOCAL RMSD: 1.858 Number of atoms: 17 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 25.088 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 14.581 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.922092 * X + 0.134170 * Y + 0.362966 * Z + 7.448586 Y_new = -0.335917 * X + 0.743176 * Y + 0.578661 * Z + 14.439213 Z_new = -0.192109 * X + -0.655505 * Y + 0.730347 * Z + 6.940566 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.349356 0.193311 -0.731447 [DEG: -20.0166 11.0759 -41.9088 ] ZXZ: 2.581376 0.751966 -2.856506 [DEG: 147.9019 43.0845 -163.6657 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS288_5 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS288_5.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 17 1.86 35.673 14.58 REMARK ---------------------------------------------------------- MOLECULE T0955TS288_5 PFRMAT TS TARGET T0955 MODEL 5 REFINED PARENT N/A ATOM 1 N SER 1 -0.740 -14.942 -1.058 1.00 6.70 ATOM 2 CA SER 1 -1.400 -14.174 0.033 1.00 6.70 ATOM 3 C SER 1 -0.479 -13.124 0.672 1.00 6.70 ATOM 4 O SER 1 -0.709 -11.927 0.498 1.00 6.70 ATOM 5 CB SER 1 -1.997 -15.113 1.095 1.00 7.20 ATOM 6 OG SER 1 -0.997 -15.967 1.639 1.00 7.20 ATOM 7 N GLN 2 0.572 -13.533 1.400 1.00 4.90 ATOM 8 CA GLN 2 1.381 -12.666 2.277 1.00 4.90 ATOM 9 C GLN 2 2.042 -11.439 1.621 1.00 4.90 ATOM 10 O GLN 2 2.179 -10.415 2.286 1.00 4.90 ATOM 11 CB GLN 2 2.418 -13.523 3.027 1.00 6.10 ATOM 12 CG GLN 2 3.517 -14.144 2.140 1.00 6.10 ATOM 13 CD GLN 2 4.608 -14.863 2.940 1.00 6.10 ATOM 14 OE1 GLN 2 4.482 -15.168 4.121 1.00 6.10 ATOM 15 NE2 GLN 2 5.734 -15.165 2.325 1.00 6.10 ATOM 16 N GLU 3 2.414 -11.479 0.337 1.00 3.70 ATOM 17 CA GLU 3 3.032 -10.312 -0.326 1.00 3.70 ATOM 18 C GLU 3 2.053 -9.136 -0.480 1.00 3.70 ATOM 19 O GLU 3 2.467 -7.982 -0.375 1.00 3.70 ATOM 20 CB GLU 3 3.641 -10.698 -1.683 1.00 4.90 ATOM 21 CG GLU 3 4.805 -11.692 -1.533 1.00 4.90 ATOM 22 CD GLU 3 5.768 -11.672 -2.740 1.00 4.90 ATOM 23 OE1 GLU 3 5.320 -11.500 -3.901 1.00 4.90 ATOM 24 OE2 GLU 3 6.996 -11.844 -2.536 1.00 4.90 ATOM 25 N THR 4 0.750 -9.406 -0.633 1.00 3.50 ATOM 26 CA THR 4 -0.297 -8.362 -0.647 1.00 3.50 ATOM 27 C THR 4 -0.399 -7.673 0.720 1.00 3.50 ATOM 28 O THR 4 -0.471 -6.444 0.791 1.00 3.50 ATOM 29 CB THR 4 -1.665 -8.940 -1.065 1.00 4.30 ATOM 30 OG1 THR 4 -1.603 -9.466 -2.379 1.00 4.30 ATOM 31 CG2 THR 4 -2.782 -7.893 -1.080 1.00 4.30 ATOM 32 N ARG 5 -0.334 -8.444 1.819 1.00 3.00 ATOM 33 CA ARG 5 -0.314 -7.905 3.193 1.00 3.00 ATOM 34 C ARG 5 0.981 -7.146 3.506 1.00 3.00 ATOM 35 O ARG 5 0.909 -6.056 4.074 1.00 3.00 ATOM 36 CB ARG 5 -0.573 -9.024 4.220 1.00 5.30 ATOM 37 CG ARG 5 -2.045 -9.468 4.212 1.00 5.30 ATOM 38 CD ARG 5 -2.328 -10.455 5.350 1.00 5.30 ATOM 39 NE ARG 5 -3.775 -10.727 5.481 1.00 5.30 ATOM 40 CZ ARG 5 -4.397 -11.209 6.544 1.00 5.30 ATOM 41 NH1 ARG 5 -5.693 -11.349 6.545 1.00 5.30 ATOM 42 NH2 ARG 5 -3.758 -11.562 7.626 1.00 5.30 ATOM 43 N LYS 6 2.143 -7.648 3.064 1.00 2.60 ATOM 44 CA LYS 6 3.440 -6.955 3.207 1.00 2.60 ATOM 45 C LYS 6 3.427 -5.597 2.496 1.00 2.60 ATOM 46 O LYS 6 3.709 -4.590 3.138 1.00 2.60 ATOM 47 CB LYS 6 4.602 -7.846 2.719 1.00 4.20 ATOM 48 CG LYS 6 5.959 -7.188 3.036 1.00 4.20 ATOM 49 CD LYS 6 7.158 -8.004 2.537 1.00 4.20 ATOM 50 CE LYS 6 8.447 -7.216 2.816 1.00 4.20 ATOM 51 NZ LYS 6 9.655 -7.912 2.296 1.00 4.20 ATOM 52 N LYS 7 3.033 -5.562 1.214 1.00 2.80 ATOM 53 CA LYS 7 2.907 -4.336 0.394 1.00 2.80 ATOM 54 C LYS 7 1.803 -3.372 0.865 1.00 2.80 ATOM 55 O LYS 7 1.756 -2.231 0.401 1.00 2.80 ATOM 56 CB LYS 7 2.682 -4.720 -1.079 1.00 4.40 ATOM 57 CG LYS 7 3.947 -5.287 -1.742 1.00 4.40 ATOM 58 CD LYS 7 3.643 -5.736 -3.178 1.00 4.40 ATOM 59 CE LYS 7 4.928 -6.168 -3.895 1.00 4.40 ATOM 60 NZ LYS 7 4.651 -6.646 -5.278 1.00 4.40 ATOM 61 N CYS 8 0.907 -3.820 1.751 1.00 2.70 ATOM 62 CA CYS 8 -0.036 -2.954 2.451 1.00 2.70 ATOM 63 C CYS 8 0.625 -2.306 3.680 1.00 2.70 ATOM 64 O CYS 8 0.878 -1.104 3.656 1.00 2.70 ATOM 65 CB CYS 8 -1.324 -3.718 2.782 1.00 3.30 ATOM 66 SG CYS 8 -2.497 -2.576 3.575 1.00 3.30 ATOM 67 N THR 9 0.929 -3.068 4.741 1.00 2.50 ATOM 68 CA THR 9 1.412 -2.489 6.015 1.00 2.50 ATOM 69 C THR 9 2.752 -1.770 5.837 1.00 2.50 ATOM 70 O THR 9 2.881 -0.605 6.220 1.00 2.50 ATOM 71 CB THR 9 1.477 -3.542 7.132 1.00 3.10 ATOM 72 OG1 THR 9 0.188 -4.100 7.317 1.00 3.10 ATOM 73 CG2 THR 9 1.913 -2.943 8.472 1.00 3.10 ATOM 74 N GLU 10 3.742 -2.421 5.219 1.00 2.60 ATOM 75 CA GLU 10 4.938 -1.727 4.733 1.00 2.60 ATOM 76 C GLU 10 4.565 -1.028 3.404 1.00 2.60 ATOM 77 O GLU 10 3.741 -1.529 2.642 1.00 2.60 ATOM 78 CB GLU 10 6.143 -2.687 4.645 1.00 3.80 ATOM 79 CG GLU 10 7.437 -1.974 4.216 1.00 3.80 ATOM 80 CD GLU 10 8.728 -2.653 4.720 1.00 3.80 ATOM 81 OE1 GLU 10 8.762 -3.892 4.925 1.00 3.80 ATOM 82 OE2 GLU 10 9.741 -1.929 4.897 1.00 3.80 ATOM 83 N MET 11 5.150 0.141 3.127 1.00 2.60 ATOM 84 CA MET 11 4.769 1.088 2.059 1.00 2.60 ATOM 85 C MET 11 3.544 1.975 2.363 1.00 2.60 ATOM 86 O MET 11 3.676 3.175 2.147 1.00 2.60 ATOM 87 CB MET 11 4.726 0.440 0.660 1.00 3.90 ATOM 88 CG MET 11 4.768 1.485 -0.465 1.00 3.90 ATOM 89 SD MET 11 4.461 0.837 -2.134 1.00 3.90 ATOM 90 CE MET 11 5.886 -0.266 -2.342 1.00 3.90 ATOM 91 N LYS 12 2.415 1.516 2.938 1.00 2.40 ATOM 92 CA LYS 12 1.355 2.462 3.399 1.00 2.40 ATOM 93 C LYS 12 1.856 3.318 4.566 1.00 2.40 ATOM 94 O LYS 12 1.774 4.547 4.518 1.00 2.40 ATOM 95 CB LYS 12 0.042 1.738 3.761 1.00 3.90 ATOM 96 CG LYS 12 -1.115 2.709 4.052 1.00 3.90 ATOM 97 CD LYS 12 -2.409 1.960 4.409 1.00 3.90 ATOM 98 CE LYS 12 -3.546 2.965 4.645 1.00 3.90 ATOM 99 NZ LYS 12 -4.825 2.286 4.994 1.00 3.90 ATOM 100 N LYS 13 2.458 2.668 5.571 1.00 2.60 ATOM 101 CA LYS 13 3.095 3.321 6.731 1.00 2.60 ATOM 102 C LYS 13 4.223 4.262 6.295 1.00 2.60 ATOM 103 O LYS 13 4.258 5.409 6.729 1.00 2.60 ATOM 104 CB LYS 13 3.566 2.228 7.709 1.00 4.10 ATOM 105 CG LYS 13 4.150 2.781 9.018 1.00 4.10 ATOM 106 CD LYS 13 4.450 1.633 9.996 1.00 4.10 ATOM 107 CE LYS 13 5.054 2.170 11.301 1.00 4.10 ATOM 108 NZ LYS 13 5.305 1.076 12.280 1.00 4.10 ATOM 109 N LYS 14 5.100 3.818 5.385 1.00 2.90 ATOM 110 CA LYS 14 6.211 4.638 4.860 1.00 2.90 ATOM 111 C LYS 14 5.755 5.770 3.933 1.00 2.90 ATOM 112 O LYS 14 6.290 6.862 4.055 1.00 2.90 ATOM 113 CB LYS 14 7.296 3.760 4.210 1.00 4.30 ATOM 114 CG LYS 14 8.070 2.975 5.281 1.00 4.30 ATOM 115 CD LYS 14 9.213 2.144 4.679 1.00 4.30 ATOM 116 CE LYS 14 10.042 1.511 5.806 1.00 4.30 ATOM 117 NZ LYS 14 11.029 0.527 5.289 1.00 4.30 ATOM 118 N PHE 15 4.737 5.585 3.089 1.00 2.50 ATOM 119 CA PHE 15 4.172 6.676 2.277 1.00 2.50 ATOM 120 C PHE 15 3.634 7.801 3.169 1.00 2.50 ATOM 121 O PHE 15 4.026 8.958 3.003 1.00 2.50 ATOM 122 CB PHE 15 3.078 6.152 1.334 1.00 4.00 ATOM 123 CG PHE 15 2.389 7.253 0.543 1.00 4.00 ATOM 124 CD1 PHE 15 3.038 7.836 -0.562 1.00 4.00 ATOM 125 CD2 PHE 15 1.121 7.728 0.937 1.00 4.00 ATOM 126 CE1 PHE 15 2.427 8.890 -1.267 1.00 4.00 ATOM 127 CE2 PHE 15 0.511 8.781 0.232 1.00 4.00 ATOM 128 CZ PHE 15 1.164 9.364 -0.869 1.00 4.00 ATOM 129 N LYS 16 2.812 7.453 4.174 1.00 2.20 ATOM 130 CA LYS 16 2.324 8.410 5.177 1.00 2.20 ATOM 131 C LYS 16 3.485 9.054 5.938 1.00 2.20 ATOM 132 O LYS 16 3.590 10.275 5.955 1.00 2.20 ATOM 133 CB LYS 16 1.314 7.717 6.109 1.00 3.70 ATOM 134 CG LYS 16 0.721 8.691 7.142 1.00 3.70 ATOM 135 CD LYS 16 -0.367 8.017 7.988 1.00 3.70 ATOM 136 CE LYS 16 -0.876 8.991 9.060 1.00 3.70 ATOM 137 NZ LYS 16 -1.946 8.382 9.897 1.00 3.70 ATOM 138 N ASN 17 4.386 8.264 6.525 1.00 2.90 ATOM 139 CA ASN 17 5.455 8.785 7.381 1.00 2.90 ATOM 140 C ASN 17 6.492 9.629 6.617 1.00 2.90 ATOM 141 O ASN 17 6.888 10.672 7.126 1.00 2.90 ATOM 142 CB ASN 17 6.107 7.636 8.174 1.00 3.80 ATOM 143 CG ASN 17 5.199 7.022 9.238 1.00 3.80 ATOM 144 OD1 ASN 17 4.055 7.405 9.450 1.00 3.80 ATOM 145 ND2 ASN 17 5.703 6.063 9.984 1.00 3.80 ATOM 146 N CYS 18 6.896 9.260 5.397 1.00 3.00 ATOM 147 CA CYS 18 7.806 10.071 4.577 1.00 3.00 ATOM 148 C CYS 18 7.167 11.396 4.131 1.00 3.00 ATOM 149 O CYS 18 7.812 12.441 4.226 1.00 3.00 ATOM 150 CB CYS 18 8.289 9.265 3.362 1.00 3.50 ATOM 151 SG CYS 18 9.401 7.928 3.894 1.00 3.50 ATOM 152 N GLU 19 5.900 11.393 3.699 1.00 2.20 ATOM 153 CA GLU 19 5.190 12.636 3.362 1.00 2.20 ATOM 154 C GLU 19 4.942 13.514 4.600 1.00 2.20 ATOM 155 O GLU 19 5.135 14.725 4.527 1.00 2.20 ATOM 156 CB GLU 19 3.872 12.335 2.630 1.00 3.30 ATOM 157 CG GLU 19 4.083 11.825 1.192 1.00 3.30 ATOM 158 CD GLU 19 4.799 12.841 0.276 1.00 3.30 ATOM 159 OE1 GLU 19 4.487 14.056 0.325 1.00 3.30 ATOM 160 OE2 GLU 19 5.675 12.427 -0.524 1.00 3.30 ATOM 161 N VAL 20 4.605 12.928 5.757 1.00 2.30 ATOM 162 CA VAL 20 4.465 13.664 7.026 1.00 2.30 ATOM 163 C VAL 20 5.810 14.223 7.507 1.00 2.30 ATOM 164 O VAL 20 5.853 15.385 7.899 1.00 2.30 ATOM 165 CB VAL 20 3.767 12.811 8.108 1.00 2.90 ATOM 166 CG1 VAL 20 3.798 13.458 9.499 1.00 2.90 ATOM 167 CG2 VAL 20 2.284 12.606 7.757 1.00 2.90 ATOM 168 N ARG 21 6.923 13.477 7.418 1.00 3.10 ATOM 169 CA ARG 21 8.273 14.004 7.715 1.00 3.10 ATOM 170 C ARG 21 8.662 15.151 6.776 1.00 3.10 ATOM 171 O ARG 21 9.206 16.152 7.238 1.00 3.10 ATOM 172 CB ARG 21 9.340 12.890 7.665 1.00 5.10 ATOM 173 CG ARG 21 9.360 12.022 8.934 1.00 5.10 ATOM 174 CD ARG 21 10.618 11.142 9.021 1.00 5.10 ATOM 175 NE ARG 21 10.671 10.098 7.972 1.00 5.10 ATOM 176 CZ ARG 21 10.539 8.791 8.131 1.00 5.10 ATOM 177 NH1 ARG 21 10.728 7.982 7.128 1.00 5.10 ATOM 178 NH2 ARG 21 10.227 8.253 9.277 1.00 5.10 ATOM 179 N CYS 22 8.352 15.038 5.483 1.00 2.70 ATOM 180 CA CYS 22 8.589 16.097 4.497 1.00 2.70 ATOM 181 C CYS 22 7.743 17.355 4.789 1.00 2.70 ATOM 182 O CYS 22 8.273 18.468 4.834 1.00 2.70 ATOM 183 CB CYS 22 8.320 15.519 3.101 1.00 3.30 ATOM 184 SG CYS 22 8.751 16.734 1.823 1.00 3.30 ATOM 185 N ASP 23 6.448 17.182 5.070 1.00 1.90 ATOM 186 CA ASP 23 5.535 18.268 5.442 1.00 1.90 ATOM 187 C ASP 23 5.921 18.934 6.772 1.00 1.90 ATOM 188 O ASP 23 5.950 20.159 6.835 1.00 1.90 ATOM 189 CB ASP 23 4.081 17.769 5.503 1.00 2.60 ATOM 190 CG ASP 23 3.444 17.444 4.138 1.00 2.60 ATOM 191 OD1 ASP 23 3.961 17.869 3.074 1.00 2.60 ATOM 192 OD2 ASP 23 2.353 16.822 4.129 1.00 2.60 ATOM 193 N GLU 24 6.274 18.172 7.813 1.00 2.50 ATOM 194 CA GLU 24 6.780 18.715 9.082 1.00 2.50 ATOM 195 C GLU 24 8.100 19.473 8.890 1.00 2.50 ATOM 196 O GLU 24 8.242 20.580 9.409 1.00 2.50 ATOM 197 CB GLU 24 6.980 17.600 10.123 1.00 3.80 ATOM 198 CG GLU 24 5.655 17.134 10.745 1.00 3.80 ATOM 199 CD GLU 24 5.840 16.070 11.850 1.00 3.80 ATOM 200 OE1 GLU 24 6.891 15.385 11.914 1.00 3.80 ATOM 201 OE2 GLU 24 4.915 15.910 12.685 1.00 3.80 ATOM 202 N SER 25 9.038 18.931 8.105 1.00 3.00 ATOM 203 CA SER 25 10.297 19.604 7.767 1.00 3.00 ATOM 204 C SER 25 10.037 20.967 7.113 1.00 3.00 ATOM 205 O SER 25 10.518 21.990 7.606 1.00 3.00 ATOM 206 CB SER 25 11.151 18.701 6.867 1.00 3.60 ATOM 207 OG SER 25 12.360 19.345 6.493 1.00 3.60 ATOM 208 N ASN 26 9.199 21.019 6.070 1.00 2.40 ATOM 209 CA ASN 26 8.860 22.266 5.375 1.00 2.40 ATOM 210 C ASN 26 8.060 23.248 6.258 1.00 2.40 ATOM 211 O ASN 26 8.400 24.432 6.319 1.00 2.40 ATOM 212 CB ASN 26 8.103 21.931 4.076 1.00 3.10 ATOM 213 CG ASN 26 8.948 21.206 3.034 1.00 3.10 ATOM 214 OD1 ASN 26 10.171 21.265 3.012 1.00 3.10 ATOM 215 ND2 ASN 26 8.318 20.520 2.106 1.00 3.10 ATOM 216 N HIS 27 7.031 22.768 6.966 1.00 1.80 ATOM 217 CA HIS 27 6.152 23.576 7.824 1.00 1.80 ATOM 218 C HIS 27 6.907 24.207 8.999 1.00 1.80 ATOM 219 O HIS 27 6.727 25.391 9.286 1.00 1.80 ATOM 220 CB HIS 27 4.992 22.704 8.329 1.00 3.20 ATOM 221 CG HIS 27 3.994 23.444 9.187 1.00 3.20 ATOM 222 ND1 HIS 27 3.090 24.410 8.730 1.00 3.20 ATOM 223 CD2 HIS 27 3.803 23.259 10.525 1.00 3.20 ATOM 224 CE1 HIS 27 2.379 24.788 9.808 1.00 3.20 ATOM 225 NE2 HIS 27 2.786 24.113 10.898 1.00 3.20 ATOM 226 N CYS 28 7.798 23.448 9.647 1.00 2.40 ATOM 227 CA CYS 28 8.677 23.983 10.685 1.00 2.40 ATOM 228 C CYS 28 9.738 24.928 10.105 1.00 2.40 ATOM 229 O CYS 28 9.958 25.983 10.690 1.00 2.40 ATOM 230 CB CYS 28 9.300 22.837 11.495 1.00 3.00 ATOM 231 SG CYS 28 7.998 21.985 12.441 1.00 3.00 ATOM 232 N VAL 29 10.358 24.638 8.953 1.00 2.60 ATOM 233 CA VAL 29 11.345 25.543 8.321 1.00 2.60 ATOM 234 C VAL 29 10.753 26.924 8.019 1.00 2.60 ATOM 235 O VAL 29 11.363 27.929 8.381 1.00 2.60 ATOM 236 CB VAL 29 11.978 24.892 7.070 1.00 3.30 ATOM 237 CG1 VAL 29 12.643 25.880 6.102 1.00 3.30 ATOM 238 CG2 VAL 29 13.069 23.903 7.504 1.00 3.30 ATOM 239 N GLU 30 9.546 27.011 7.449 1.00 2.10 ATOM 240 CA GLU 30 8.897 28.307 7.161 1.00 2.10 ATOM 241 C GLU 30 8.372 29.058 8.411 1.00 2.10 ATOM 242 O GLU 30 7.841 30.164 8.286 1.00 2.10 ATOM 243 CB GLU 30 7.847 28.164 6.044 1.00 3.40 ATOM 244 CG GLU 30 6.540 27.466 6.446 1.00 3.40 ATOM 245 CD GLU 30 5.483 27.483 5.319 1.00 3.40 ATOM 246 OE1 GLU 30 5.831 27.606 4.117 1.00 3.40 ATOM 247 OE2 GLU 30 4.271 27.365 5.627 1.00 3.40 ATOM 248 N VAL 31 8.549 28.486 9.612 1.00 2.00 ATOM 249 CA VAL 31 8.324 29.126 10.926 1.00 2.00 ATOM 250 C VAL 31 9.652 29.422 11.649 1.00 2.00 ATOM 251 O VAL 31 9.801 30.463 12.288 1.00 2.00 ATOM 252 CB VAL 31 7.386 28.244 11.781 1.00 2.70 ATOM 253 CG1 VAL 31 7.293 28.682 13.248 1.00 2.70 ATOM 254 CG2 VAL 31 5.962 28.262 11.207 1.00 2.70 ATOM 255 N ARG 32 10.640 28.525 11.536 1.00 2.30 ATOM 256 CA ARG 32 11.966 28.624 12.171 1.00 2.30 ATOM 257 C ARG 32 12.868 29.647 11.489 1.00 2.30 ATOM 258 O ARG 32 13.492 30.442 12.185 1.00 2.30 ATOM 259 CB ARG 32 12.629 27.235 12.210 1.00 4.30 ATOM 260 CG ARG 32 11.963 26.341 13.268 1.00 4.30 ATOM 261 CD ARG 32 12.499 24.907 13.225 1.00 4.30 ATOM 262 NE ARG 32 11.844 24.078 14.258 1.00 4.30 ATOM 263 CZ ARG 32 11.949 22.772 14.426 1.00 4.30 ATOM 264 NH1 ARG 32 11.297 22.181 15.384 1.00 4.30 ATOM 265 NH2 ARG 32 12.690 22.029 13.652 1.00 4.30 ATOM 266 N CYS 33 12.904 29.694 10.155 1.00 2.10 ATOM 267 CA CYS 33 13.680 30.703 9.423 1.00 2.10 ATOM 268 C CYS 33 13.120 32.119 9.631 1.00 2.10 ATOM 269 O CYS 33 13.892 33.049 9.866 1.00 2.10 ATOM 270 CB CYS 33 13.737 30.334 7.933 1.00 2.80 ATOM 271 SG CYS 33 14.744 28.836 7.719 1.00 2.80 ATOM 272 N SER 34 11.794 32.288 9.616 1.00 2.30 ATOM 273 CA SER 34 11.144 33.586 9.863 1.00 2.30 ATOM 274 C SER 34 11.270 34.058 11.322 1.00 2.30 ATOM 275 O SER 34 11.201 35.260 11.571 1.00 2.30 ATOM 276 CB SER 34 9.682 33.550 9.403 1.00 2.80 ATOM 277 OG SER 34 8.940 32.561 10.095 1.00 2.80 ATOM 278 N ASP 35 11.518 33.161 12.284 1.00 2.60 ATOM 279 CA ASP 35 11.907 33.514 13.658 1.00 2.60 ATOM 280 C ASP 35 13.407 33.873 13.726 1.00 2.60 ATOM 281 O ASP 35 13.778 34.967 14.149 1.00 2.60 ATOM 282 CB ASP 35 11.562 32.344 14.597 1.00 3.30 ATOM 283 CG ASP 35 11.927 32.588 16.075 1.00 3.30 ATOM 284 OD1 ASP 35 11.944 33.754 16.535 1.00 3.30 ATOM 285 OD2 ASP 35 12.164 31.592 16.801 1.00 3.30 ATOM 286 N THR 36 14.273 32.981 13.228 1.00 2.30 ATOM 287 CA THR 36 15.746 33.084 13.280 1.00 2.30 ATOM 288 C THR 36 16.293 34.333 12.576 1.00 2.30 ATOM 289 O THR 36 17.206 34.981 13.096 1.00 2.30 ATOM 290 CB THR 36 16.368 31.803 12.679 1.00 2.90 ATOM 291 OG1 THR 36 16.177 30.719 13.569 1.00 2.90 ATOM 292 CG2 THR 36 17.872 31.865 12.400 1.00 2.90 ATOM 293 N LYS 37 15.745 34.698 11.408 1.00 2.50 ATOM 294 CA LYS 37 16.184 35.875 10.631 1.00 2.50 ATOM 295 C LYS 37 15.601 37.203 11.144 1.00 2.50 ATOM 296 O LYS 37 16.208 38.253 10.926 1.00 2.50 ATOM 297 CB LYS 37 15.864 35.663 9.140 1.00 4.30 ATOM 298 CG LYS 37 16.664 34.491 8.540 1.00 4.30 ATOM 299 CD LYS 37 16.399 34.347 7.035 1.00 4.30 ATOM 300 CE LYS 37 17.206 33.173 6.463 1.00 4.30 ATOM 301 NZ LYS 37 17.039 33.057 4.988 1.00 4.30 ATOM 302 N TYR 38 14.450 37.171 11.825 1.00 3.30 ATOM 303 CA TYR 38 13.774 38.361 12.368 1.00 3.30 ATOM 304 C TYR 38 14.263 38.718 13.785 1.00 3.30 ATOM 305 O TYR 38 14.653 39.858 14.045 1.00 3.30 ATOM 306 CB TYR 38 12.259 38.122 12.329 1.00 5.10 ATOM 307 CG TYR 38 11.412 39.356 12.569 1.00 5.10 ATOM 308 CD1 TYR 38 11.101 40.203 11.486 1.00 5.10 ATOM 309 CD2 TYR 38 10.912 39.645 13.854 1.00 5.10 ATOM 310 CE1 TYR 38 10.294 41.340 11.685 1.00 5.10 ATOM 311 CE2 TYR 38 10.103 40.782 14.056 1.00 5.10 ATOM 312 CZ TYR 38 9.794 41.634 12.972 1.00 5.10 ATOM 313 OH TYR 38 9.015 42.734 13.177 1.00 5.10 ATOM 314 N THR 39 14.301 37.730 14.684 1.00 3.50 ATOM 315 CA THR 39 14.882 37.806 16.036 1.00 3.50 ATOM 316 C THR 39 16.349 37.363 15.956 1.00 3.50 ATOM 317 O THR 39 16.699 36.211 16.228 1.00 3.50 ATOM 318 CB THR 39 14.051 36.964 17.025 1.00 3.90 ATOM 319 OG1 THR 39 12.709 37.424 17.025 1.00 3.90 ATOM 320 CG2 THR 39 14.544 37.073 18.472 1.00 3.90 ATOM 321 N LEU 40 17.208 38.282 15.497 1.00 3.50 ATOM 322 CA LEU 40 18.597 38.006 15.111 1.00 3.50 ATOM 323 C LEU 40 19.524 37.602 16.279 1.00 3.50 ATOM 324 O LEU 40 20.403 36.754 16.095 1.00 3.50 ATOM 325 CB LEU 40 19.114 39.256 14.369 1.00 4.10 ATOM 326 CG LEU 40 20.523 39.136 13.758 1.00 4.10 ATOM 327 CD1 LEU 40 20.602 38.040 12.692 1.00 4.10 ATOM 328 CD2 LEU 40 20.900 40.464 13.098 1.00 4.10 ATOM 329 N CYS 41 19.335 38.198 17.463 1.00 4.90 ATOM 330 CA CYS 41 20.122 37.929 18.680 1.00 4.90 ATOM 331 C CYS 41 19.557 36.747 19.496 1.00 4.90 ATOM 332 O CYS 41 18.387 36.816 19.942 1.00 4.90 ATOM 333 CB CYS 41 20.236 39.213 19.518 1.00 5.40 ATOM 334 SG CYS 41 21.080 40.512 18.563 1.00 5.40 TER END