####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 334), selected 41 , name T0955TS288_4 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS288_4.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 32 10 - 41 4.54 12.13 LCS_AVERAGE: 72.28 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 1 - 17 1.63 19.46 LCS_AVERAGE: 30.34 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 2 - 16 0.69 19.62 LCS_AVERAGE: 22.43 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 17 20 3 3 4 11 13 16 17 17 17 18 19 19 19 20 22 26 27 27 28 28 LCS_GDT Q 2 Q 2 15 17 20 9 14 15 15 15 16 17 17 17 18 19 19 19 20 22 26 27 27 28 28 LCS_GDT E 3 E 3 15 17 20 10 14 15 15 15 16 17 17 17 18 19 19 19 21 23 26 27 27 28 28 LCS_GDT T 4 T 4 15 17 20 10 14 15 15 15 16 17 17 17 18 19 19 19 20 23 26 27 27 28 28 LCS_GDT R 5 R 5 15 17 20 10 14 15 15 15 16 17 17 17 18 19 19 19 20 23 26 27 27 28 28 LCS_GDT K 6 K 6 15 17 20 10 14 15 15 15 16 17 17 17 18 19 19 20 22 23 26 27 27 28 29 LCS_GDT K 7 K 7 15 17 20 10 14 15 15 15 16 17 17 17 18 19 19 20 22 23 26 27 28 29 30 LCS_GDT C 8 C 8 15 17 20 10 14 15 15 15 16 17 17 17 18 19 19 20 22 23 26 27 27 28 30 LCS_GDT T 9 T 9 15 17 31 10 14 15 15 15 16 17 17 17 18 19 19 20 22 23 26 27 28 29 32 LCS_GDT E 10 E 10 15 17 32 10 14 15 15 15 16 17 17 17 19 20 24 26 28 30 31 31 32 32 32 LCS_GDT M 11 M 11 15 17 32 10 14 15 15 15 16 17 17 17 19 21 24 28 29 30 31 31 32 32 32 LCS_GDT K 12 K 12 15 17 32 10 14 15 15 15 16 17 17 18 20 23 26 29 29 30 31 31 32 32 32 LCS_GDT K 13 K 13 15 17 32 8 14 15 15 15 16 17 17 19 22 24 28 29 29 30 31 31 32 32 32 LCS_GDT K 14 K 14 15 17 32 7 14 15 15 15 16 21 23 25 27 28 28 29 29 30 31 31 32 32 32 LCS_GDT F 15 F 15 15 17 32 7 14 15 15 16 18 21 23 25 27 28 28 29 29 30 31 31 32 32 32 LCS_GDT K 16 K 16 15 17 32 7 14 15 15 16 18 21 23 25 27 28 28 29 29 30 31 31 32 32 32 LCS_GDT N 17 N 17 5 17 32 4 6 8 13 16 18 21 23 25 27 28 28 29 29 30 31 31 32 32 32 LCS_GDT C 18 C 18 5 12 32 4 6 8 13 16 18 21 23 25 27 28 28 29 29 30 31 31 32 32 32 LCS_GDT E 19 E 19 5 12 32 3 5 7 11 15 18 21 23 25 27 28 28 29 29 30 31 31 32 32 32 LCS_GDT V 20 V 20 5 12 32 3 5 8 13 16 18 21 23 25 27 28 28 29 29 30 31 31 32 32 32 LCS_GDT R 21 R 21 5 12 32 3 5 8 13 16 18 21 23 25 27 28 28 29 29 30 31 31 32 32 32 LCS_GDT C 22 C 22 5 12 32 3 5 7 11 16 18 21 23 25 27 28 28 29 29 30 31 31 32 32 32 LCS_GDT D 23 D 23 5 12 32 3 5 7 13 16 18 21 23 25 27 28 28 29 29 30 31 31 32 32 32 LCS_GDT E 24 E 24 5 12 32 4 5 8 13 16 18 21 23 25 27 28 28 29 29 30 31 31 32 32 32 LCS_GDT S 25 S 25 4 12 32 4 4 5 10 12 15 18 22 25 27 28 28 29 29 30 31 31 32 32 32 LCS_GDT N 26 N 26 4 12 32 4 5 8 10 13 17 21 23 25 27 28 28 29 29 30 31 31 32 32 32 LCS_GDT H 27 H 27 7 8 32 7 7 7 13 16 18 21 23 25 27 28 28 29 29 30 31 31 32 32 32 LCS_GDT C 28 C 28 7 8 32 7 7 7 13 16 18 21 23 25 27 28 28 29 29 30 31 31 32 32 32 LCS_GDT V 29 V 29 7 8 32 7 7 7 11 16 18 21 23 25 27 28 28 29 29 30 31 31 32 32 32 LCS_GDT E 30 E 30 7 8 32 7 7 8 13 16 18 21 23 25 27 28 28 29 29 30 31 31 32 32 32 LCS_GDT V 31 V 31 7 8 32 7 7 7 13 16 18 21 23 25 27 28 28 29 29 30 31 31 32 32 32 LCS_GDT R 32 R 32 7 8 32 7 7 7 9 14 18 19 23 25 27 28 28 29 29 30 31 31 32 32 32 LCS_GDT C 33 C 33 7 8 32 7 7 8 13 16 18 21 23 25 27 28 28 29 29 30 31 31 32 32 32 LCS_GDT S 34 S 34 3 8 32 3 6 8 13 16 18 21 23 25 27 28 28 29 29 30 31 31 32 32 32 LCS_GDT D 35 D 35 7 7 32 4 6 7 7 11 16 21 23 25 27 28 28 29 29 30 31 31 32 32 32 LCS_GDT T 36 T 36 7 7 32 4 6 7 7 7 9 12 21 25 27 28 28 29 29 30 31 31 32 32 32 LCS_GDT K 37 K 37 7 7 32 4 6 7 7 7 16 21 23 25 27 28 28 29 29 30 31 31 32 32 32 LCS_GDT Y 38 Y 38 7 7 32 4 5 7 7 7 9 17 22 25 27 28 28 29 29 30 31 31 32 32 32 LCS_GDT T 39 T 39 7 7 32 3 6 7 7 7 16 21 23 25 27 28 28 29 29 30 31 31 32 32 32 LCS_GDT L 40 L 40 7 7 32 3 6 7 7 7 9 11 16 22 25 28 28 28 28 29 30 31 32 32 32 LCS_GDT C 41 C 41 7 7 32 3 6 7 7 7 12 19 23 25 27 28 28 29 29 30 31 31 32 32 32 LCS_AVERAGE LCS_A: 41.68 ( 22.43 30.34 72.28 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 14 15 15 16 18 21 23 25 27 28 28 29 29 30 31 31 32 32 32 GDT PERCENT_AT 24.39 34.15 36.59 36.59 39.02 43.90 51.22 56.10 60.98 65.85 68.29 68.29 70.73 70.73 73.17 75.61 75.61 78.05 78.05 78.05 GDT RMS_LOCAL 0.31 0.65 0.69 0.69 1.71 1.93 2.46 2.62 2.86 3.11 3.30 3.30 3.73 3.73 3.99 4.38 4.17 4.54 4.54 4.54 GDT RMS_ALL_AT 20.14 19.47 19.62 19.62 13.75 13.82 13.59 13.37 13.52 13.19 13.35 13.35 12.56 12.56 12.36 11.98 12.51 12.13 12.13 12.13 # Checking swapping # possible swapping detected: F 15 F 15 # possible swapping detected: E 30 E 30 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 37.987 0 0.453 0.881 42.343 0.000 0.000 42.343 LGA Q 2 Q 2 34.726 0 0.235 1.232 37.968 0.000 0.000 37.279 LGA E 3 E 3 28.863 0 0.056 1.052 32.992 0.000 0.000 32.992 LGA T 4 T 4 27.635 0 0.027 1.156 30.177 0.000 0.000 30.177 LGA R 5 R 5 27.396 0 0.061 1.502 37.752 0.000 0.000 37.559 LGA K 6 K 6 23.722 0 0.027 0.724 25.465 0.000 0.000 22.965 LGA K 7 K 7 18.718 0 0.097 0.656 20.896 0.000 0.000 19.437 LGA C 8 C 8 18.477 0 0.039 0.805 20.662 0.000 0.000 20.627 LGA T 9 T 9 17.614 0 0.019 0.116 22.028 0.000 0.000 22.028 LGA E 10 E 10 13.172 0 0.049 0.561 15.150 0.000 0.000 11.214 LGA M 11 M 11 9.390 0 0.063 1.097 12.348 0.000 0.000 10.634 LGA K 12 K 12 9.203 0 0.115 0.616 17.170 0.000 0.000 17.170 LGA K 13 K 13 9.236 0 0.037 0.535 20.115 0.000 0.000 20.115 LGA K 14 K 14 4.131 0 0.022 0.925 5.988 17.727 10.101 5.831 LGA F 15 F 15 2.208 0 0.305 1.332 5.222 36.364 18.512 3.998 LGA K 16 K 16 1.731 0 0.136 0.990 3.725 62.273 37.576 3.725 LGA N 17 N 17 0.795 0 0.180 0.802 3.957 77.727 61.591 1.789 LGA C 18 C 18 1.258 0 0.019 0.163 2.502 49.091 49.697 1.612 LGA E 19 E 19 3.357 0 0.345 0.935 6.246 25.000 14.545 4.241 LGA V 20 V 20 1.466 0 0.130 0.189 2.452 61.818 51.688 2.132 LGA R 21 R 21 1.364 0 0.121 1.125 3.391 65.455 47.934 2.796 LGA C 22 C 22 2.213 0 0.079 0.811 6.521 47.727 34.848 6.521 LGA D 23 D 23 2.250 0 0.594 0.828 4.314 27.273 26.364 2.185 LGA E 24 E 24 0.888 0 0.643 0.494 7.621 56.364 28.283 7.621 LGA S 25 S 25 5.734 0 0.109 0.117 8.329 2.727 1.818 8.329 LGA N 26 N 26 3.611 0 0.126 1.162 9.336 40.909 20.455 8.055 LGA H 27 H 27 2.902 0 0.310 1.238 11.080 34.545 13.818 10.606 LGA C 28 C 28 2.137 0 0.157 0.247 5.997 48.182 33.939 5.997 LGA V 29 V 29 3.247 0 0.069 0.110 7.315 25.455 14.545 6.743 LGA E 30 E 30 2.413 0 0.088 0.685 9.766 31.364 14.141 9.766 LGA V 31 V 31 2.426 0 0.240 0.225 6.124 30.000 17.403 5.613 LGA R 32 R 32 3.518 0 0.297 1.284 14.190 28.636 10.413 11.837 LGA C 33 C 33 1.737 0 0.523 0.558 4.002 37.727 30.606 4.002 LGA S 34 S 34 0.305 0 0.323 0.328 1.728 86.818 77.273 1.728 LGA D 35 D 35 3.586 0 0.625 0.953 5.244 10.909 11.136 2.723 LGA T 36 T 36 5.969 0 0.066 0.141 9.993 0.455 0.260 9.993 LGA K 37 K 37 3.758 0 0.103 1.556 7.729 5.455 3.636 7.729 LGA Y 38 Y 38 5.593 0 0.056 1.337 13.845 0.909 0.303 13.845 LGA T 39 T 39 3.811 0 0.022 0.064 5.160 4.545 7.532 3.860 LGA L 40 L 40 7.535 0 0.148 0.785 14.380 0.000 0.000 13.351 LGA C 41 C 41 4.672 1 0.531 0.623 7.087 0.455 3.377 3.991 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 334 99.70 41 41 SUMMARY(RMSD_GDC): 9.538 9.329 10.623 22.339 15.654 8.248 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 23 2.62 50.610 46.620 0.844 LGA_LOCAL RMSD: 2.625 Number of atoms: 23 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 13.370 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 9.538 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.552385 * X + -0.342245 * Y + 0.760091 * Z + 5.164835 Y_new = 0.804881 * X + -0.456219 * Y + 0.379514 * Z + -0.708941 Z_new = 0.216881 * X + 0.821421 * Y + 0.527475 * Z + -4.450991 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.172265 -0.218618 0.999960 [DEG: 124.4616 -12.5259 57.2935 ] ZXZ: 2.033885 1.015170 0.258141 [DEG: 116.5330 58.1650 14.7904 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS288_4 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS288_4.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 23 2.62 46.620 9.54 REMARK ---------------------------------------------------------- MOLECULE T0955TS288_4 PFRMAT TS TARGET T0955 MODEL 4 REFINED PARENT N/A ATOM 1 N SER 1 22.137 9.580 16.192 1.00 6.50 ATOM 2 CA SER 1 21.635 10.979 16.094 1.00 6.50 ATOM 3 C SER 1 21.051 11.301 14.707 1.00 6.50 ATOM 4 O SER 1 19.872 11.025 14.475 1.00 6.50 ATOM 5 CB SER 1 22.684 12.000 16.582 1.00 6.90 ATOM 6 OG SER 1 22.208 13.334 16.468 1.00 6.90 ATOM 7 N GLN 2 21.832 11.835 13.755 1.00 4.90 ATOM 8 CA GLN 2 21.306 12.392 12.492 1.00 4.90 ATOM 9 C GLN 2 20.704 11.344 11.541 1.00 4.90 ATOM 10 O GLN 2 19.671 11.601 10.925 1.00 4.90 ATOM 11 CB GLN 2 22.413 13.193 11.780 1.00 5.80 ATOM 12 CG GLN 2 22.903 14.432 12.558 1.00 5.80 ATOM 13 CD GLN 2 21.900 15.588 12.634 1.00 5.80 ATOM 14 OE1 GLN 2 20.786 15.548 12.122 1.00 5.80 ATOM 15 NE2 GLN 2 22.260 16.683 13.269 1.00 5.80 ATOM 16 N GLU 3 21.290 10.145 11.449 1.00 5.40 ATOM 17 CA GLU 3 20.757 9.064 10.599 1.00 5.40 ATOM 18 C GLU 3 19.384 8.572 11.091 1.00 5.40 ATOM 19 O GLU 3 18.480 8.335 10.287 1.00 5.40 ATOM 20 CB GLU 3 21.748 7.890 10.526 1.00 6.80 ATOM 21 CG GLU 3 23.096 8.289 9.904 1.00 6.80 ATOM 22 CD GLU 3 23.929 7.067 9.463 1.00 6.80 ATOM 23 OE1 GLU 3 23.954 6.033 10.175 1.00 6.80 ATOM 24 OE2 GLU 3 24.590 7.139 8.397 1.00 6.80 ATOM 25 N THR 4 19.194 8.493 12.413 1.00 5.00 ATOM 26 CA THR 4 17.906 8.143 13.040 1.00 5.00 ATOM 27 C THR 4 16.852 9.215 12.754 1.00 5.00 ATOM 28 O THR 4 15.747 8.889 12.320 1.00 5.00 ATOM 29 CB THR 4 18.056 7.944 14.561 1.00 6.00 ATOM 30 OG1 THR 4 19.123 7.054 14.832 1.00 6.00 ATOM 31 CG2 THR 4 16.792 7.362 15.198 1.00 6.00 ATOM 32 N ARG 5 17.204 10.503 12.907 1.00 3.50 ATOM 33 CA ARG 5 16.317 11.636 12.580 1.00 3.50 ATOM 34 C ARG 5 15.892 11.616 11.109 1.00 3.50 ATOM 35 O ARG 5 14.703 11.759 10.818 1.00 3.50 ATOM 36 CB ARG 5 17.011 12.958 12.961 1.00 5.50 ATOM 37 CG ARG 5 16.070 14.170 12.823 1.00 5.50 ATOM 38 CD ARG 5 16.775 15.495 13.143 1.00 5.50 ATOM 39 NE ARG 5 17.858 15.798 12.184 1.00 5.50 ATOM 40 CZ ARG 5 17.754 16.305 10.968 1.00 5.50 ATOM 41 NH1 ARG 5 18.833 16.476 10.265 1.00 5.50 ATOM 42 NH2 ARG 5 16.612 16.639 10.433 1.00 5.50 ATOM 43 N LYS 6 16.833 11.372 10.188 1.00 3.20 ATOM 44 CA LYS 6 16.567 11.241 8.742 1.00 3.20 ATOM 45 C LYS 6 15.604 10.086 8.445 1.00 3.20 ATOM 46 O LYS 6 14.615 10.293 7.742 1.00 3.20 ATOM 47 CB LYS 6 17.904 11.097 7.990 1.00 5.20 ATOM 48 CG LYS 6 17.719 11.169 6.465 1.00 5.20 ATOM 49 CD LYS 6 19.068 11.101 5.735 1.00 5.20 ATOM 50 CE LYS 6 18.854 11.238 4.221 1.00 5.20 ATOM 51 NZ LYS 6 20.143 11.213 3.477 1.00 5.20 ATOM 52 N LYS 7 15.831 8.906 9.037 1.00 3.70 ATOM 53 CA LYS 7 14.963 7.722 8.890 1.00 3.70 ATOM 54 C LYS 7 13.537 7.981 9.392 1.00 3.70 ATOM 55 O LYS 7 12.583 7.738 8.654 1.00 3.70 ATOM 56 CB LYS 7 15.623 6.520 9.588 1.00 5.80 ATOM 57 CG LYS 7 14.846 5.214 9.356 1.00 5.80 ATOM 58 CD LYS 7 15.625 4.003 9.887 1.00 5.80 ATOM 59 CE LYS 7 14.841 2.711 9.623 1.00 5.80 ATOM 60 NZ LYS 7 15.609 1.507 10.041 1.00 5.80 ATOM 61 N CYS 8 13.378 8.541 10.592 1.00 3.10 ATOM 62 CA CYS 8 12.064 8.890 11.147 1.00 3.10 ATOM 63 C CYS 8 11.336 9.962 10.310 1.00 3.10 ATOM 64 O CYS 8 10.142 9.824 10.045 1.00 3.10 ATOM 65 CB CYS 8 12.233 9.336 12.606 1.00 3.90 ATOM 66 SG CYS 8 12.816 7.940 13.616 1.00 3.90 ATOM 67 N THR 9 12.053 10.989 9.835 1.00 2.90 ATOM 68 CA THR 9 11.501 12.038 8.951 1.00 2.90 ATOM 69 C THR 9 11.021 11.455 7.618 1.00 2.90 ATOM 70 O THR 9 9.910 11.752 7.175 1.00 2.90 ATOM 71 CB THR 9 12.535 13.155 8.706 1.00 3.50 ATOM 72 OG1 THR 9 12.841 13.810 9.922 1.00 3.50 ATOM 73 CG2 THR 9 12.048 14.239 7.740 1.00 3.50 ATOM 74 N GLU 10 11.818 10.579 6.995 1.00 3.30 ATOM 75 CA GLU 10 11.452 9.893 5.752 1.00 3.30 ATOM 76 C GLU 10 10.229 8.986 5.943 1.00 3.30 ATOM 77 O GLU 10 9.262 9.107 5.194 1.00 3.30 ATOM 78 CB GLU 10 12.667 9.119 5.208 1.00 4.90 ATOM 79 CG GLU 10 12.341 8.347 3.917 1.00 4.90 ATOM 80 CD GLU 10 13.578 7.761 3.202 1.00 4.90 ATOM 81 OE1 GLU 10 14.699 7.743 3.769 1.00 4.90 ATOM 82 OE2 GLU 10 13.428 7.294 2.046 1.00 4.90 ATOM 83 N MET 11 10.220 8.126 6.968 1.00 3.00 ATOM 84 CA MET 11 9.103 7.208 7.234 1.00 3.00 ATOM 85 C MET 11 7.796 7.943 7.572 1.00 3.00 ATOM 86 O MET 11 6.733 7.529 7.108 1.00 3.00 ATOM 87 CB MET 11 9.477 6.218 8.349 1.00 4.50 ATOM 88 CG MET 11 10.543 5.214 7.884 1.00 4.50 ATOM 89 SD MET 11 11.124 4.060 9.162 1.00 4.50 ATOM 90 CE MET 11 9.642 3.036 9.392 1.00 4.50 ATOM 91 N LYS 12 7.856 9.071 8.296 1.00 3.40 ATOM 92 CA LYS 12 6.691 9.937 8.562 1.00 3.40 ATOM 93 C LYS 12 6.067 10.447 7.261 1.00 3.40 ATOM 94 O LYS 12 4.873 10.258 7.036 1.00 3.40 ATOM 95 CB LYS 12 7.118 11.083 9.501 1.00 5.10 ATOM 96 CG LYS 12 5.977 12.061 9.826 1.00 5.10 ATOM 97 CD LYS 12 6.444 13.130 10.824 1.00 5.10 ATOM 98 CE LYS 12 5.317 14.136 11.100 1.00 5.10 ATOM 99 NZ LYS 12 5.736 15.178 12.076 1.00 5.10 ATOM 100 N LYS 13 6.863 11.039 6.369 1.00 4.50 ATOM 101 CA LYS 13 6.367 11.575 5.088 1.00 4.50 ATOM 102 C LYS 13 5.901 10.458 4.141 1.00 4.50 ATOM 103 O LYS 13 4.775 10.505 3.648 1.00 4.50 ATOM 104 CB LYS 13 7.428 12.503 4.467 1.00 6.00 ATOM 105 CG LYS 13 7.559 13.783 5.313 1.00 6.00 ATOM 106 CD LYS 13 8.571 14.778 4.731 1.00 6.00 ATOM 107 CE LYS 13 8.616 16.031 5.619 1.00 6.00 ATOM 108 NZ LYS 13 9.544 17.064 5.082 1.00 6.00 ATOM 109 N LYS 14 6.726 9.423 3.954 1.00 4.30 ATOM 110 CA LYS 14 6.506 8.320 2.999 1.00 4.30 ATOM 111 C LYS 14 5.373 7.359 3.397 1.00 4.30 ATOM 112 O LYS 14 4.672 6.872 2.510 1.00 4.30 ATOM 113 CB LYS 14 7.850 7.588 2.805 1.00 5.60 ATOM 114 CG LYS 14 7.902 6.730 1.532 1.00 5.60 ATOM 115 CD LYS 14 9.315 6.161 1.321 1.00 5.60 ATOM 116 CE LYS 14 9.382 5.350 0.019 1.00 5.60 ATOM 117 NZ LYS 14 10.746 4.798 -0.215 1.00 5.60 ATOM 118 N PHE 15 5.178 7.104 4.699 1.00 3.90 ATOM 119 CA PHE 15 4.276 6.052 5.205 1.00 3.90 ATOM 120 C PHE 15 3.272 6.474 6.302 1.00 3.90 ATOM 121 O PHE 15 2.448 5.640 6.695 1.00 3.90 ATOM 122 CB PHE 15 5.107 4.834 5.654 1.00 5.20 ATOM 123 CG PHE 15 6.046 4.257 4.607 1.00 5.20 ATOM 124 CD1 PHE 15 7.425 4.150 4.869 1.00 5.20 ATOM 125 CD2 PHE 15 5.534 3.794 3.378 1.00 5.20 ATOM 126 CE1 PHE 15 8.286 3.587 3.909 1.00 5.20 ATOM 127 CE2 PHE 15 6.395 3.237 2.416 1.00 5.20 ATOM 128 CZ PHE 15 7.772 3.132 2.682 1.00 5.20 ATOM 129 N LYS 16 3.284 7.729 6.787 1.00 5.20 ATOM 130 CA LYS 16 2.227 8.274 7.673 1.00 5.20 ATOM 131 C LYS 16 1.407 9.388 7.009 1.00 5.20 ATOM 132 O LYS 16 0.178 9.371 7.101 1.00 5.20 ATOM 133 CB LYS 16 2.813 8.687 9.037 1.00 7.00 ATOM 134 CG LYS 16 1.713 8.746 10.111 1.00 7.00 ATOM 135 CD LYS 16 2.278 9.017 11.512 1.00 7.00 ATOM 136 CE LYS 16 1.149 8.896 12.549 1.00 7.00 ATOM 137 NZ LYS 16 1.646 9.074 13.940 1.00 7.00 ATOM 138 N ASN 17 2.060 10.319 6.304 1.00 5.30 ATOM 139 CA ASN 17 1.387 11.330 5.478 1.00 5.30 ATOM 140 C ASN 17 0.796 10.685 4.207 1.00 5.30 ATOM 141 O ASN 17 -0.423 10.707 4.016 1.00 5.30 ATOM 142 CB ASN 17 2.367 12.489 5.167 1.00 6.10 ATOM 143 CG ASN 17 1.828 13.861 5.555 1.00 6.10 ATOM 144 OD1 ASN 17 1.164 14.046 6.566 1.00 6.10 ATOM 145 ND2 ASN 17 2.109 14.879 4.772 1.00 6.10 ATOM 146 N CYS 18 1.641 10.072 3.370 1.00 4.30 ATOM 147 CA CYS 18 1.206 9.231 2.248 1.00 4.30 ATOM 148 C CYS 18 0.934 7.785 2.749 1.00 4.30 ATOM 149 O CYS 18 1.457 7.391 3.796 1.00 4.30 ATOM 150 CB CYS 18 2.234 9.307 1.103 1.00 4.60 ATOM 151 SG CYS 18 3.137 10.881 0.826 1.00 4.60 ATOM 152 N GLU 19 0.115 6.985 2.049 1.00 4.10 ATOM 153 CA GLU 19 -0.383 5.684 2.562 1.00 4.10 ATOM 154 C GLU 19 -0.626 4.601 1.484 1.00 4.10 ATOM 155 O GLU 19 -0.488 4.841 0.284 1.00 4.10 ATOM 156 CB GLU 19 -1.640 5.921 3.428 1.00 5.40 ATOM 157 CG GLU 19 -2.892 6.330 2.633 1.00 5.40 ATOM 158 CD GLU 19 -4.132 6.561 3.524 1.00 5.40 ATOM 159 OE1 GLU 19 -4.228 5.997 4.642 1.00 5.40 ATOM 160 OE2 GLU 19 -5.050 7.303 3.093 1.00 5.40 ATOM 161 N VAL 20 -0.978 3.380 1.916 1.00 3.80 ATOM 162 CA VAL 20 -1.150 2.179 1.068 1.00 3.80 ATOM 163 C VAL 20 -2.415 1.389 1.451 1.00 3.80 ATOM 164 O VAL 20 -2.786 1.319 2.626 1.00 3.80 ATOM 165 CB VAL 20 0.113 1.284 1.131 1.00 4.20 ATOM 166 CG1 VAL 20 -0.012 -0.008 0.308 1.00 4.20 ATOM 167 CG2 VAL 20 1.359 2.026 0.626 1.00 4.20 ATOM 168 N ARG 21 -3.057 0.772 0.450 1.00 4.10 ATOM 169 CA ARG 21 -4.234 -0.114 0.535 1.00 4.10 ATOM 170 C ARG 21 -4.011 -1.397 -0.278 1.00 4.10 ATOM 171 O ARG 21 -3.170 -1.436 -1.177 1.00 4.10 ATOM 172 CB ARG 21 -5.464 0.636 -0.015 1.00 6.10 ATOM 173 CG ARG 21 -6.093 1.626 0.982 1.00 6.10 ATOM 174 CD ARG 21 -7.145 2.521 0.306 1.00 6.10 ATOM 175 NE ARG 21 -8.129 1.737 -0.477 1.00 6.10 ATOM 176 CZ ARG 21 -8.667 2.062 -1.641 1.00 6.10 ATOM 177 NH1 ARG 21 -9.373 1.191 -2.303 1.00 6.10 ATOM 178 NH2 ARG 21 -8.513 3.242 -2.173 1.00 6.10 ATOM 179 N CYS 22 -4.798 -2.441 -0.021 1.00 4.30 ATOM 180 CA CYS 22 -4.837 -3.624 -0.884 1.00 4.30 ATOM 181 C CYS 22 -6.206 -4.330 -0.840 1.00 4.30 ATOM 182 O CYS 22 -6.749 -4.567 0.244 1.00 4.30 ATOM 183 CB CYS 22 -3.673 -4.566 -0.539 1.00 4.70 ATOM 184 SG CYS 22 -3.366 -5.803 -1.823 1.00 4.70 ATOM 185 N ASP 23 -6.772 -4.649 -2.010 1.00 4.90 ATOM 186 CA ASP 23 -8.122 -5.228 -2.133 1.00 4.90 ATOM 187 C ASP 23 -8.111 -6.769 -2.131 1.00 4.90 ATOM 188 O ASP 23 -8.989 -7.395 -1.532 1.00 4.90 ATOM 189 CB ASP 23 -8.812 -4.695 -3.402 1.00 5.60 ATOM 190 CG ASP 23 -9.132 -3.184 -3.393 1.00 5.60 ATOM 191 OD1 ASP 23 -9.014 -2.502 -2.345 1.00 5.60 ATOM 192 OD2 ASP 23 -9.554 -2.668 -4.458 1.00 5.60 ATOM 193 N GLU 24 -7.105 -7.383 -2.760 1.00 5.50 ATOM 194 CA GLU 24 -6.827 -8.828 -2.731 1.00 5.50 ATOM 195 C GLU 24 -5.344 -9.104 -3.044 1.00 5.50 ATOM 196 O GLU 24 -4.627 -8.221 -3.517 1.00 5.50 ATOM 197 CB GLU 24 -7.758 -9.595 -3.697 1.00 6.80 ATOM 198 CG GLU 24 -7.566 -9.266 -5.188 1.00 6.80 ATOM 199 CD GLU 24 -8.350 -10.226 -6.109 1.00 6.80 ATOM 200 OE1 GLU 24 -9.454 -10.698 -5.741 1.00 6.80 ATOM 201 OE2 GLU 24 -7.863 -10.515 -7.231 1.00 6.80 ATOM 202 N SER 25 -4.880 -10.339 -2.826 1.00 4.80 ATOM 203 CA SER 25 -3.462 -10.739 -2.935 1.00 4.80 ATOM 204 C SER 25 -2.796 -10.411 -4.286 1.00 4.80 ATOM 205 O SER 25 -1.577 -10.242 -4.348 1.00 4.80 ATOM 206 CB SER 25 -3.345 -12.253 -2.700 1.00 5.20 ATOM 207 OG SER 25 -4.032 -12.646 -1.515 1.00 5.20 ATOM 208 N ASN 26 -3.589 -10.312 -5.361 1.00 4.10 ATOM 209 CA ASN 26 -3.143 -10.004 -6.726 1.00 4.10 ATOM 210 C ASN 26 -3.334 -8.523 -7.142 1.00 4.10 ATOM 211 O ASN 26 -3.070 -8.179 -8.297 1.00 4.10 ATOM 212 CB ASN 26 -3.866 -10.956 -7.698 1.00 4.80 ATOM 213 CG ASN 26 -3.701 -12.431 -7.357 1.00 4.80 ATOM 214 OD1 ASN 26 -2.629 -12.912 -7.011 1.00 4.80 ATOM 215 ND2 ASN 26 -4.764 -13.203 -7.430 1.00 4.80 ATOM 216 N HIS 27 -3.831 -7.648 -6.255 1.00 3.30 ATOM 217 CA HIS 27 -4.256 -6.282 -6.602 1.00 3.30 ATOM 218 C HIS 27 -4.173 -5.312 -5.407 1.00 3.30 ATOM 219 O HIS 27 -5.108 -5.206 -4.605 1.00 3.30 ATOM 220 CB HIS 27 -5.683 -6.360 -7.174 1.00 4.40 ATOM 221 CG HIS 27 -6.252 -5.075 -7.735 1.00 4.40 ATOM 222 ND1 HIS 27 -7.607 -4.873 -8.017 1.00 4.40 ATOM 223 CD2 HIS 27 -5.551 -3.977 -8.150 1.00 4.40 ATOM 224 CE1 HIS 27 -7.695 -3.653 -8.572 1.00 4.40 ATOM 225 NE2 HIS 27 -6.477 -3.094 -8.666 1.00 4.40 ATOM 226 N CYS 28 -3.060 -4.575 -5.311 1.00 2.60 ATOM 227 CA CYS 28 -2.844 -3.528 -4.303 1.00 2.60 ATOM 228 C CYS 28 -2.836 -2.107 -4.906 1.00 2.60 ATOM 229 O CYS 28 -2.758 -1.926 -6.123 1.00 2.60 ATOM 230 CB CYS 28 -1.586 -3.820 -3.469 1.00 3.20 ATOM 231 SG CYS 28 -1.504 -5.410 -2.581 1.00 3.20 ATOM 232 N VAL 29 -2.953 -1.083 -4.049 1.00 2.30 ATOM 233 CA VAL 29 -3.176 0.324 -4.432 1.00 2.30 ATOM 234 C VAL 29 -2.367 1.258 -3.529 1.00 2.30 ATOM 235 O VAL 29 -2.404 1.142 -2.306 1.00 2.30 ATOM 236 CB VAL 29 -4.683 0.666 -4.379 1.00 2.80 ATOM 237 CG1 VAL 29 -4.973 2.121 -4.768 1.00 2.80 ATOM 238 CG2 VAL 29 -5.497 -0.244 -5.310 1.00 2.80 ATOM 239 N GLU 30 -1.637 2.206 -4.112 1.00 2.30 ATOM 240 CA GLU 30 -0.766 3.132 -3.381 1.00 2.30 ATOM 241 C GLU 30 -1.266 4.577 -3.509 1.00 2.30 ATOM 242 O GLU 30 -1.476 5.090 -4.611 1.00 2.30 ATOM 243 CB GLU 30 0.694 2.982 -3.836 1.00 3.60 ATOM 244 CG GLU 30 1.248 1.568 -3.572 1.00 3.60 ATOM 245 CD GLU 30 2.766 1.433 -3.826 1.00 3.60 ATOM 246 OE1 GLU 30 3.505 2.443 -3.809 1.00 3.60 ATOM 247 OE2 GLU 30 3.238 0.281 -4.025 1.00 3.60 ATOM 248 N VAL 31 -1.447 5.243 -2.367 1.00 2.80 ATOM 249 CA VAL 31 -1.930 6.623 -2.273 1.00 2.80 ATOM 250 C VAL 31 -0.756 7.528 -1.902 1.00 2.80 ATOM 251 O VAL 31 -0.502 7.821 -0.728 1.00 2.80 ATOM 252 CB VAL 31 -3.118 6.750 -1.295 1.00 3.20 ATOM 253 CG1 VAL 31 -3.728 8.157 -1.359 1.00 3.20 ATOM 254 CG2 VAL 31 -4.235 5.743 -1.607 1.00 3.20 ATOM 255 N ARG 32 -0.002 7.945 -2.927 1.00 3.50 ATOM 256 CA ARG 32 1.000 9.016 -2.804 1.00 3.50 ATOM 257 C ARG 32 0.294 10.287 -2.311 1.00 3.50 ATOM 258 O ARG 32 -0.918 10.452 -2.456 1.00 3.50 ATOM 259 CB ARG 32 1.690 9.275 -4.162 1.00 5.20 ATOM 260 CG ARG 32 2.578 8.124 -4.661 1.00 5.20 ATOM 261 CD ARG 32 3.884 7.979 -3.862 1.00 5.20 ATOM 262 NE ARG 32 4.686 6.843 -4.362 1.00 5.20 ATOM 263 CZ ARG 32 4.464 5.561 -4.128 1.00 5.20 ATOM 264 NH1 ARG 32 5.134 4.624 -4.725 1.00 5.20 ATOM 265 NH2 ARG 32 3.552 5.141 -3.305 1.00 5.20 ATOM 266 N CYS 33 1.043 11.213 -1.728 1.00 4.20 ATOM 267 CA CYS 33 0.449 12.463 -1.267 1.00 4.20 ATOM 268 C CYS 33 -0.149 13.239 -2.466 1.00 4.20 ATOM 269 O CYS 33 0.536 13.496 -3.460 1.00 4.20 ATOM 270 CB CYS 33 1.486 13.235 -0.453 1.00 4.60 ATOM 271 SG CYS 33 1.871 12.468 1.154 1.00 4.60 ATOM 272 N SER 34 -1.450 13.542 -2.379 1.00 5.00 ATOM 273 CA SER 34 -2.317 14.133 -3.423 1.00 5.00 ATOM 274 C SER 34 -2.641 13.278 -4.675 1.00 5.00 ATOM 275 O SER 34 -3.487 13.705 -5.464 1.00 5.00 ATOM 276 CB SER 34 -1.816 15.529 -3.838 1.00 5.60 ATOM 277 OG SER 34 -1.592 16.365 -2.705 1.00 5.60 ATOM 278 N ASP 35 -2.054 12.087 -4.873 1.00 4.80 ATOM 279 CA ASP 35 -2.175 11.263 -6.104 1.00 4.80 ATOM 280 C ASP 35 -2.344 9.748 -5.829 1.00 4.80 ATOM 281 O ASP 35 -1.790 9.217 -4.871 1.00 4.80 ATOM 282 CB ASP 35 -0.940 11.467 -7.008 1.00 5.40 ATOM 283 CG ASP 35 -0.758 12.880 -7.595 1.00 5.40 ATOM 284 OD1 ASP 35 -1.754 13.537 -7.980 1.00 5.40 ATOM 285 OD2 ASP 35 0.409 13.315 -7.755 1.00 5.40 ATOM 286 N THR 36 -3.055 9.011 -6.696 1.00 4.10 ATOM 287 CA THR 36 -3.279 7.550 -6.550 1.00 4.10 ATOM 288 C THR 36 -2.677 6.746 -7.710 1.00 4.10 ATOM 289 O THR 36 -2.802 7.142 -8.872 1.00 4.10 ATOM 290 CB THR 36 -4.778 7.226 -6.392 1.00 4.60 ATOM 291 OG1 THR 36 -5.321 7.907 -5.275 1.00 4.60 ATOM 292 CG2 THR 36 -5.048 5.736 -6.158 1.00 4.60 ATOM 293 N LYS 37 -2.068 5.590 -7.399 1.00 3.60 ATOM 294 CA LYS 37 -1.549 4.593 -8.358 1.00 3.60 ATOM 295 C LYS 37 -2.048 3.179 -8.019 1.00 3.60 ATOM 296 O LYS 37 -2.224 2.840 -6.849 1.00 3.60 ATOM 297 CB LYS 37 -0.010 4.646 -8.410 1.00 4.90 ATOM 298 CG LYS 37 0.511 5.983 -8.965 1.00 4.90 ATOM 299 CD LYS 37 2.031 5.962 -9.173 1.00 4.90 ATOM 300 CE LYS 37 2.491 7.303 -9.764 1.00 4.90 ATOM 301 NZ LYS 37 3.951 7.312 -10.059 1.00 4.90 ATOM 302 N TYR 38 -2.261 2.351 -9.041 1.00 3.50 ATOM 303 CA TYR 38 -2.862 1.010 -8.936 1.00 3.50 ATOM 304 C TYR 38 -1.895 -0.074 -9.454 1.00 3.50 ATOM 305 O TYR 38 -1.233 0.133 -10.477 1.00 3.50 ATOM 306 CB TYR 38 -4.193 0.985 -9.710 1.00 5.40 ATOM 307 CG TYR 38 -5.198 2.067 -9.331 1.00 5.40 ATOM 308 CD1 TYR 38 -5.167 3.323 -9.975 1.00 5.40 ATOM 309 CD2 TYR 38 -6.181 1.813 -8.355 1.00 5.40 ATOM 310 CE1 TYR 38 -6.103 4.321 -9.637 1.00 5.40 ATOM 311 CE2 TYR 38 -7.115 2.810 -8.007 1.00 5.40 ATOM 312 CZ TYR 38 -7.081 4.066 -8.649 1.00 5.40 ATOM 313 OH TYR 38 -7.998 5.018 -8.319 1.00 5.40 ATOM 314 N THR 39 -1.828 -1.231 -8.782 1.00 3.50 ATOM 315 CA THR 39 -0.822 -2.282 -9.048 1.00 3.50 ATOM 316 C THR 39 -1.448 -3.678 -9.117 1.00 3.50 ATOM 317 O THR 39 -1.849 -4.253 -8.102 1.00 3.50 ATOM 318 CB THR 39 0.302 -2.245 -7.991 1.00 3.80 ATOM 319 OG1 THR 39 0.905 -0.963 -7.959 1.00 3.80 ATOM 320 CG2 THR 39 1.418 -3.253 -8.287 1.00 3.80 ATOM 321 N LEU 40 -1.511 -4.236 -10.330 1.00 4.30 ATOM 322 CA LEU 40 -1.866 -5.635 -10.605 1.00 4.30 ATOM 323 C LEU 40 -0.622 -6.544 -10.546 1.00 4.30 ATOM 324 O LEU 40 0.473 -6.126 -10.945 1.00 4.30 ATOM 325 CB LEU 40 -2.520 -5.726 -11.998 1.00 5.20 ATOM 326 CG LEU 40 -3.909 -5.066 -12.088 1.00 5.20 ATOM 327 CD1 LEU 40 -4.237 -4.727 -13.544 1.00 5.20 ATOM 328 CD2 LEU 40 -5.000 -5.993 -11.549 1.00 5.20 ATOM 329 N CYS 41 -0.807 -7.794 -10.108 1.00 4.90 ATOM 330 CA CYS 41 0.231 -8.835 -10.020 1.00 4.90 ATOM 331 C CYS 41 -0.153 -10.087 -10.839 1.00 4.90 ATOM 332 O CYS 41 -1.052 -10.850 -10.413 1.00 4.90 ATOM 333 CB CYS 41 0.524 -9.156 -8.543 1.00 5.30 ATOM 334 SG CYS 41 1.025 -7.666 -7.625 1.00 5.30 TER END