####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS282_5 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS282_5.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 32 9 - 40 4.81 11.10 LONGEST_CONTINUOUS_SEGMENT: 32 10 - 41 4.89 11.55 LCS_AVERAGE: 72.34 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 16 - 35 1.85 11.74 LCS_AVERAGE: 43.90 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 2 - 16 0.96 21.88 LONGEST_CONTINUOUS_SEGMENT: 15 3 - 17 0.99 21.61 LCS_AVERAGE: 25.22 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 17 20 3 3 6 10 17 17 17 17 18 18 19 19 21 22 22 23 24 26 26 27 LCS_GDT Q 2 Q 2 15 17 20 6 13 14 16 17 17 17 17 18 18 19 19 21 22 22 23 24 26 26 27 LCS_GDT E 3 E 3 15 17 20 6 13 14 16 17 17 17 17 18 18 19 19 21 22 22 23 24 26 26 27 LCS_GDT T 4 T 4 15 17 20 7 13 14 16 17 17 17 17 18 18 19 19 21 22 22 23 24 24 25 26 LCS_GDT R 5 R 5 15 17 20 7 13 14 16 17 17 17 17 18 18 19 19 21 22 22 23 24 26 26 27 LCS_GDT K 6 K 6 15 17 20 7 13 14 16 17 17 17 17 18 18 19 19 21 22 22 24 28 31 32 32 LCS_GDT K 7 K 7 15 17 20 7 13 14 16 17 17 17 17 18 18 19 19 21 22 22 23 24 26 28 32 LCS_GDT C 8 C 8 15 17 20 7 13 14 16 17 17 17 17 18 18 19 19 21 22 22 23 24 26 26 27 LCS_GDT T 9 T 9 15 17 32 7 13 14 16 17 17 17 17 18 18 19 19 21 25 28 29 30 31 32 32 LCS_GDT E 10 E 10 15 17 32 7 13 14 16 17 17 17 17 18 21 23 26 27 28 29 29 30 31 32 32 LCS_GDT M 11 M 11 15 17 32 7 13 14 16 17 17 17 17 18 18 19 19 21 25 27 29 30 31 32 32 LCS_GDT K 12 K 12 15 17 32 7 13 14 16 17 17 17 17 18 23 24 26 27 28 29 29 30 31 32 32 LCS_GDT K 13 K 13 15 17 32 7 13 14 17 19 23 24 24 25 25 25 26 27 28 29 29 30 31 32 32 LCS_GDT K 14 K 14 15 17 32 5 13 14 16 17 17 18 21 21 22 23 24 26 28 29 29 30 31 32 32 LCS_GDT F 15 F 15 15 17 32 4 8 14 16 17 17 17 17 18 22 22 24 26 28 29 29 30 31 32 32 LCS_GDT K 16 K 16 15 20 32 4 10 13 17 19 23 24 24 25 25 25 26 27 28 29 29 30 31 32 32 LCS_GDT N 17 N 17 15 20 32 6 10 14 17 19 23 24 24 25 25 25 26 27 28 29 29 30 31 32 32 LCS_GDT C 18 C 18 5 20 32 6 10 13 17 19 23 24 24 25 25 25 26 27 28 29 29 30 31 32 32 LCS_GDT E 19 E 19 5 20 32 3 5 7 14 19 23 24 24 25 25 25 26 27 28 29 29 30 31 32 32 LCS_GDT V 20 V 20 5 20 32 4 10 13 17 19 23 24 24 25 25 25 26 27 28 29 29 30 31 32 32 LCS_GDT R 21 R 21 5 20 32 4 10 13 17 19 23 24 24 25 25 25 26 27 28 29 29 30 31 32 32 LCS_GDT C 22 C 22 5 20 32 4 9 10 15 17 21 24 24 25 25 25 26 27 28 29 29 30 31 32 32 LCS_GDT D 23 D 23 4 20 32 4 4 6 10 17 23 24 24 25 25 25 26 27 28 29 29 30 31 32 32 LCS_GDT E 24 E 24 4 20 32 4 5 9 14 19 23 24 24 25 25 25 26 27 28 29 29 30 31 32 32 LCS_GDT S 25 S 25 10 20 32 4 9 10 17 19 23 24 24 25 25 25 26 27 28 29 29 30 31 32 32 LCS_GDT N 26 N 26 10 20 32 4 9 11 17 19 23 24 24 25 25 25 26 27 28 29 29 30 31 32 32 LCS_GDT H 27 H 27 10 20 32 3 10 13 17 19 23 24 24 25 25 25 26 27 28 29 29 30 31 32 32 LCS_GDT C 28 C 28 10 20 32 4 10 13 17 19 23 24 24 25 25 25 26 27 28 29 29 30 31 32 32 LCS_GDT V 29 V 29 10 20 32 6 10 13 17 19 23 24 24 25 25 25 26 27 28 29 29 30 31 32 32 LCS_GDT E 30 E 30 10 20 32 6 10 13 17 19 23 24 24 25 25 25 26 27 28 29 29 30 31 32 32 LCS_GDT V 31 V 31 10 20 32 6 10 13 17 19 23 24 24 25 25 25 26 27 28 29 29 30 31 32 32 LCS_GDT R 32 R 32 10 20 32 6 10 13 17 19 23 24 24 25 25 25 26 27 28 29 29 30 31 32 32 LCS_GDT C 33 C 33 10 20 32 3 9 11 17 19 23 24 24 25 25 25 26 27 28 29 29 30 31 32 32 LCS_GDT S 34 S 34 10 20 32 3 6 13 17 19 23 24 24 25 25 25 26 27 28 29 29 30 31 32 32 LCS_GDT D 35 D 35 9 20 32 3 6 10 17 19 23 24 24 25 25 25 26 27 28 29 29 30 31 32 32 LCS_GDT T 36 T 36 8 15 32 3 6 11 14 18 23 24 24 25 25 25 26 27 28 29 29 30 31 32 32 LCS_GDT K 37 K 37 8 15 32 3 6 11 14 19 23 24 24 25 25 25 26 27 28 29 29 30 31 32 32 LCS_GDT Y 38 Y 38 8 15 32 4 5 9 13 16 23 24 24 25 25 25 26 27 28 29 29 30 31 32 32 LCS_GDT T 39 T 39 7 15 32 4 5 9 11 12 15 17 24 25 25 25 25 27 28 29 29 30 31 32 32 LCS_GDT L 40 L 40 4 12 32 4 4 7 11 12 12 16 17 18 19 22 25 26 26 26 29 30 30 30 32 LCS_GDT C 41 C 41 4 11 32 4 4 5 7 10 12 13 14 17 17 18 20 21 23 24 26 26 27 30 31 LCS_AVERAGE LCS_A: 47.15 ( 25.22 43.90 72.34 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 13 14 17 19 23 24 24 25 25 25 26 27 28 29 29 30 31 32 32 GDT PERCENT_AT 17.07 31.71 34.15 41.46 46.34 56.10 58.54 58.54 60.98 60.98 60.98 63.41 65.85 68.29 70.73 70.73 73.17 75.61 78.05 78.05 GDT RMS_LOCAL 0.26 0.66 0.82 1.50 1.63 2.15 2.21 2.21 2.47 2.47 2.47 3.08 3.26 3.54 3.75 3.75 4.07 4.55 5.14 4.81 GDT RMS_ALL_AT 22.22 22.10 22.02 11.60 11.55 11.68 11.77 11.77 11.84 11.84 11.84 11.30 11.36 11.33 11.39 11.39 11.54 10.97 10.57 11.10 # Checking swapping # possible swapping detected: E 3 E 3 # possible swapping detected: F 15 F 15 # possible swapping detected: E 19 E 19 # possible swapping detected: E 24 E 24 # possible swapping detected: D 35 D 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 33.116 0 0.646 0.689 35.306 0.000 0.000 35.306 LGA Q 2 Q 2 27.186 0 0.208 0.930 29.709 0.000 0.000 27.587 LGA E 3 E 3 25.775 0 0.049 1.216 33.467 0.000 0.000 33.467 LGA T 4 T 4 27.040 0 0.035 1.160 31.392 0.000 0.000 30.174 LGA R 5 R 5 22.329 0 0.024 1.033 32.066 0.000 0.000 32.066 LGA K 6 K 6 16.568 0 0.032 1.204 18.996 0.000 0.000 15.069 LGA K 7 K 7 18.852 0 0.031 0.654 29.963 0.000 0.000 29.963 LGA C 8 C 8 17.718 0 0.042 0.047 19.658 0.000 0.000 19.658 LGA T 9 T 9 11.085 0 0.022 0.933 13.745 0.000 0.000 12.439 LGA E 10 E 10 9.514 0 0.030 0.792 15.594 0.000 0.000 15.594 LGA M 11 M 11 12.730 0 0.112 0.867 18.132 0.000 0.000 17.710 LGA K 12 K 12 7.533 0 0.038 0.649 16.297 5.000 2.222 16.297 LGA K 13 K 13 2.510 0 0.055 0.244 5.573 8.636 29.899 4.296 LGA K 14 K 14 9.613 0 0.079 0.692 16.034 0.000 0.000 15.434 LGA F 15 F 15 8.956 0 0.474 1.420 14.258 0.000 0.000 13.495 LGA K 16 K 16 1.621 0 0.645 1.355 11.013 50.909 24.646 11.013 LGA N 17 N 17 1.128 0 0.018 0.052 2.581 69.545 54.091 2.011 LGA C 18 C 18 1.019 0 0.630 0.628 2.306 66.818 63.939 1.532 LGA E 19 E 19 2.622 0 0.199 0.826 7.041 46.364 22.828 6.486 LGA V 20 V 20 1.318 0 0.131 1.016 3.613 61.818 46.234 2.087 LGA R 21 R 21 1.901 0 0.030 1.537 7.976 41.818 26.116 4.788 LGA C 22 C 22 3.118 0 0.034 0.671 3.547 37.273 29.697 3.307 LGA D 23 D 23 2.989 0 0.707 1.095 4.871 18.636 16.591 3.474 LGA E 24 E 24 2.318 0 0.142 0.940 6.086 36.364 21.212 6.086 LGA S 25 S 25 2.159 0 0.101 0.120 2.730 38.636 40.606 1.949 LGA N 26 N 26 2.347 0 0.678 0.918 4.264 30.000 28.636 2.924 LGA H 27 H 27 1.807 0 0.226 1.094 7.041 50.909 28.364 5.904 LGA C 28 C 28 1.787 0 0.045 0.717 2.551 50.909 46.970 2.551 LGA V 29 V 29 1.589 0 0.084 1.043 3.562 50.909 47.273 3.562 LGA E 30 E 30 2.009 0 0.019 0.811 5.568 51.364 28.889 5.568 LGA V 31 V 31 1.363 0 0.077 0.207 1.755 65.909 65.974 0.879 LGA R 32 R 32 1.174 0 0.225 1.057 5.309 50.000 32.397 5.309 LGA C 33 C 33 2.091 0 0.440 0.488 3.099 48.182 39.697 3.099 LGA S 34 S 34 2.239 0 0.213 0.658 4.227 36.364 29.697 4.227 LGA D 35 D 35 1.373 0 0.183 0.876 3.687 50.000 41.364 3.687 LGA T 36 T 36 3.389 0 0.028 0.898 7.011 33.182 19.740 4.326 LGA K 37 K 37 2.514 0 0.086 1.155 9.422 20.909 13.535 9.422 LGA Y 38 Y 38 3.767 0 0.118 1.293 9.702 13.182 6.667 9.702 LGA T 39 T 39 6.143 0 0.188 1.011 7.997 0.000 0.000 6.197 LGA L 40 L 40 9.160 0 0.608 1.385 11.461 0.000 0.000 11.461 LGA C 41 C 41 12.743 0 0.210 0.316 14.860 0.000 0.000 12.516 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 9.360 9.140 10.468 25.211 19.690 9.978 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 24 2.21 50.610 50.674 1.039 LGA_LOCAL RMSD: 2.210 Number of atoms: 24 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 11.770 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 9.360 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.569743 * X + -0.068542 * Y + -0.818960 * Z + 2.688217 Y_new = 0.031532 * X + -0.997605 * Y + 0.061557 * Z + 2.438145 Z_new = -0.821218 * X + 0.009248 * Y + 0.570540 * Z + 4.486098 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 3.086305 0.963542 0.016208 [DEG: 176.8322 55.2069 0.9287 ] ZXZ: -1.645820 0.963633 -1.559535 [DEG: -94.2986 55.2121 -89.3548 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS282_5 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS282_5.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 24 2.21 50.674 9.36 REMARK ---------------------------------------------------------- MOLECULE T0955TS282_5 PFRMAT TS TARGET T0955 MODEL 5 PARENT N/A ATOM 1 CB SER 1 21.068 -1.224 21.697 1.00 0.00 C ATOM 2 OG SER 1 20.887 -2.466 22.360 1.00 0.00 O ATOM 4 C SER 1 18.956 -1.302 20.324 1.00 0.00 C ATOM 5 O SER 1 19.095 -0.996 19.132 1.00 0.00 O ATOM 8 N SER 1 18.931 -0.414 22.663 1.00 0.00 N ATOM 10 CA SER 1 19.727 -0.536 21.409 1.00 0.00 C ATOM 11 N GLN 2 18.151 -2.286 20.751 1.00 0.00 N ATOM 13 CA GLN 2 17.330 -3.132 19.861 1.00 0.00 C ATOM 14 CB GLN 2 17.536 -4.620 20.182 1.00 0.00 C ATOM 15 CG GLN 2 18.917 -5.165 19.831 1.00 0.00 C ATOM 16 CD GLN 2 19.065 -6.637 20.168 1.00 0.00 C ATOM 17 OE1 GLN 2 19.489 -6.993 21.267 1.00 0.00 O ATOM 18 NE2 GLN 2 18.717 -7.501 19.219 1.00 0.00 N ATOM 21 C GLN 2 15.838 -2.782 19.965 1.00 0.00 C ATOM 22 O GLN 2 15.114 -2.856 18.964 1.00 0.00 O ATOM 23 N GLU 3 15.400 -2.398 21.174 1.00 0.00 N ATOM 25 CA GLU 3 14.002 -2.020 21.486 1.00 0.00 C ATOM 26 CB GLU 3 13.788 -1.949 23.004 1.00 0.00 C ATOM 27 CG GLU 3 13.841 -3.296 23.721 1.00 0.00 C ATOM 28 CD GLU 3 13.623 -3.173 25.219 1.00 0.00 C ATOM 29 OE1 GLU 3 14.619 -3.005 25.954 1.00 0.00 O ATOM 30 OE2 GLU 3 12.457 -3.247 25.660 1.00 0.00 O ATOM 31 C GLU 3 13.542 -0.701 20.837 1.00 0.00 C ATOM 32 O GLU 3 12.390 -0.599 20.395 1.00 0.00 O ATOM 33 N THR 4 14.453 0.282 20.772 1.00 0.00 N ATOM 35 CA THR 4 14.205 1.620 20.187 1.00 0.00 C ATOM 36 CB THR 4 15.341 2.625 20.546 1.00 0.00 C ATOM 37 OG1 THR 4 16.617 2.044 20.243 1.00 0.00 O ATOM 39 CG2 THR 4 15.288 2.998 22.024 1.00 0.00 C ATOM 40 C THR 4 13.998 1.592 18.656 1.00 0.00 C ATOM 41 O THR 4 13.121 2.295 18.136 1.00 0.00 O ATOM 42 N ARG 5 14.788 0.755 17.964 1.00 0.00 N ATOM 44 CA ARG 5 14.737 0.571 16.497 1.00 0.00 C ATOM 45 CB ARG 5 15.958 -0.218 16.004 1.00 0.00 C ATOM 46 CG ARG 5 17.286 0.527 16.109 1.00 0.00 C ATOM 47 CD ARG 5 18.438 -0.324 15.602 1.00 0.00 C ATOM 48 NE ARG 5 19.723 0.374 15.694 1.00 0.00 N ATOM 50 CZ ARG 5 20.900 -0.129 15.323 1.00 0.00 C ATOM 51 NH1 ARG 5 21.997 0.605 15.457 1.00 0.00 N ATOM 54 NH2 ARG 5 20.997 -1.356 14.817 1.00 0.00 N ATOM 57 C ARG 5 13.444 -0.127 16.039 1.00 0.00 C ATOM 58 O ARG 5 12.860 0.253 15.015 1.00 0.00 O ATOM 59 N LYS 6 13.004 -1.127 16.820 1.00 0.00 N ATOM 61 CA LYS 6 11.781 -1.919 16.569 1.00 0.00 C ATOM 62 CB LYS 6 11.742 -3.165 17.467 1.00 0.00 C ATOM 63 CG LYS 6 12.787 -4.224 17.136 1.00 0.00 C ATOM 64 CD LYS 6 12.679 -5.422 18.073 1.00 0.00 C ATOM 65 CE LYS 6 13.718 -6.496 17.759 1.00 0.00 C ATOM 66 NZ LYS 6 13.483 -7.192 16.458 1.00 0.00 N ATOM 70 C LYS 6 10.490 -1.098 16.752 1.00 0.00 C ATOM 71 O LYS 6 9.581 -1.181 15.917 1.00 0.00 O ATOM 72 N LYS 7 10.439 -0.301 17.832 1.00 0.00 N ATOM 74 CA LYS 7 9.297 0.573 18.177 1.00 0.00 C ATOM 75 CB LYS 7 9.433 1.111 19.608 1.00 0.00 C ATOM 76 CG LYS 7 9.231 0.067 20.702 1.00 0.00 C ATOM 77 CD LYS 7 9.382 0.681 22.084 1.00 0.00 C ATOM 78 CE LYS 7 9.180 -0.360 23.175 1.00 0.00 C ATOM 79 NZ LYS 7 9.326 0.227 24.535 1.00 0.00 N ATOM 83 C LYS 7 9.130 1.746 17.193 1.00 0.00 C ATOM 84 O LYS 7 8.000 2.116 16.853 1.00 0.00 O ATOM 85 N CYS 8 10.266 2.303 16.739 1.00 0.00 N ATOM 87 CA CYS 8 10.328 3.426 15.782 1.00 0.00 C ATOM 88 CB CYS 8 11.754 3.995 15.723 1.00 0.00 C ATOM 89 SG CYS 8 11.936 5.528 14.770 1.00 0.00 S ATOM 90 C CYS 8 9.855 3.018 14.373 1.00 0.00 C ATOM 91 O CYS 8 9.102 3.761 13.733 1.00 0.00 O ATOM 92 N THR 9 10.284 1.827 13.922 1.00 0.00 N ATOM 94 CA THR 9 9.932 1.256 12.603 1.00 0.00 C ATOM 95 CB THR 9 10.830 0.036 12.242 1.00 0.00 C ATOM 96 OG1 THR 9 10.869 -0.880 13.344 1.00 0.00 O ATOM 98 CG2 THR 9 12.246 0.488 11.901 1.00 0.00 C ATOM 99 C THR 9 8.443 0.861 12.493 1.00 0.00 C ATOM 100 O THR 9 7.802 1.143 11.473 1.00 0.00 O ATOM 101 N GLU 10 7.906 0.248 13.560 1.00 0.00 N ATOM 103 CA GLU 10 6.498 -0.191 13.652 1.00 0.00 C ATOM 104 CB GLU 10 6.290 -1.112 14.862 1.00 0.00 C ATOM 105 CG GLU 10 6.894 -2.505 14.712 1.00 0.00 C ATOM 106 CD GLU 10 6.663 -3.378 15.932 1.00 0.00 C ATOM 107 OE1 GLU 10 7.514 -3.362 16.847 1.00 0.00 O ATOM 108 OE2 GLU 10 5.633 -4.084 15.975 1.00 0.00 O ATOM 109 C GLU 10 5.519 0.993 13.722 1.00 0.00 C ATOM 110 O GLU 10 4.444 0.943 13.115 1.00 0.00 O ATOM 111 N MET 11 5.925 2.056 14.431 1.00 0.00 N ATOM 113 CA MET 11 5.135 3.292 14.608 1.00 0.00 C ATOM 114 CG MET 11 4.802 4.772 16.732 1.00 0.00 C ATOM 115 SD MET 11 3.746 6.115 16.124 1.00 0.00 S ATOM 116 CE MET 11 2.166 5.276 15.975 1.00 0.00 C ATOM 117 C MET 11 5.004 4.064 13.277 1.00 0.00 C ATOM 118 O MET 11 3.891 4.429 12.889 1.00 0.00 O ATOM 119 CB MET 11 5.772 4.182 15.691 1.00 0.00 C ATOM 120 N LYS 12 6.129 4.207 12.556 1.00 0.00 N ATOM 122 CA LYS 12 6.207 4.911 11.256 1.00 0.00 C ATOM 123 CB LYS 12 7.664 5.058 10.797 1.00 0.00 C ATOM 124 CG LYS 12 8.476 6.082 11.582 1.00 0.00 C ATOM 125 CD LYS 12 9.904 6.167 11.067 1.00 0.00 C ATOM 126 CE LYS 12 10.713 7.188 11.850 1.00 0.00 C ATOM 127 NZ LYS 12 12.115 7.282 11.356 1.00 0.00 N ATOM 131 C LYS 12 5.381 4.204 10.168 1.00 0.00 C ATOM 132 O LYS 12 4.722 4.869 9.360 1.00 0.00 O ATOM 133 N LYS 13 5.435 2.864 10.166 1.00 0.00 N ATOM 135 CA LYS 13 4.693 1.998 9.229 1.00 0.00 C ATOM 136 CB LYS 13 5.231 0.562 9.267 1.00 0.00 C ATOM 137 CG LYS 13 6.585 0.374 8.593 1.00 0.00 C ATOM 138 CD LYS 13 7.049 -1.076 8.675 1.00 0.00 C ATOM 139 CE LYS 13 8.404 -1.287 8.005 1.00 0.00 C ATOM 140 NZ LYS 13 8.367 -1.134 6.519 1.00 0.00 N ATOM 144 C LYS 13 3.176 1.996 9.495 1.00 0.00 C ATOM 145 O LYS 13 2.383 1.953 8.547 1.00 0.00 O ATOM 146 N LYS 14 2.795 2.042 10.783 1.00 0.00 N ATOM 148 CA LYS 14 1.385 2.039 11.230 1.00 0.00 C ATOM 149 CB LYS 14 1.288 1.679 12.718 1.00 0.00 C ATOM 150 CG LYS 14 1.377 0.187 13.009 1.00 0.00 C ATOM 151 CD LYS 14 1.272 -0.092 14.505 1.00 0.00 C ATOM 152 CE LYS 14 1.359 -1.584 14.820 1.00 0.00 C ATOM 153 NZ LYS 14 0.175 -2.364 14.350 1.00 0.00 N ATOM 157 C LYS 14 0.532 3.288 10.938 1.00 0.00 C ATOM 158 O LYS 14 -0.581 3.140 10.421 1.00 0.00 O ATOM 159 N PHE 15 1.034 4.495 11.256 1.00 0.00 N ATOM 161 CA PHE 15 0.283 5.742 10.993 1.00 0.00 C ATOM 162 CB PHE 15 0.689 6.932 11.923 1.00 0.00 C ATOM 163 CG PHE 15 2.164 7.360 11.871 1.00 0.00 C ATOM 164 CD1 PHE 15 2.706 8.040 10.748 1.00 0.00 C ATOM 165 CD2 PHE 15 2.989 7.178 12.999 1.00 0.00 C ATOM 166 CE1 PHE 15 4.040 8.530 10.756 1.00 0.00 C ATOM 167 CE2 PHE 15 4.326 7.662 13.024 1.00 0.00 C ATOM 168 CZ PHE 15 4.852 8.342 11.899 1.00 0.00 C ATOM 169 C PHE 15 0.150 6.177 9.520 1.00 0.00 C ATOM 170 O PHE 15 -0.938 6.569 9.089 1.00 0.00 O ATOM 171 N LYS 16 1.262 6.084 8.768 1.00 0.00 N ATOM 173 CA LYS 16 1.393 6.444 7.327 1.00 0.00 C ATOM 174 CB LYS 16 0.630 5.464 6.409 1.00 0.00 C ATOM 175 CG LYS 16 1.204 4.053 6.370 1.00 0.00 C ATOM 176 CD LYS 16 0.391 3.151 5.456 1.00 0.00 C ATOM 177 CE LYS 16 0.960 1.742 5.425 1.00 0.00 C ATOM 178 NZ LYS 16 0.174 0.844 4.536 1.00 0.00 N ATOM 182 C LYS 16 1.048 7.898 6.946 1.00 0.00 C ATOM 183 O LYS 16 0.083 8.469 7.470 1.00 0.00 O ATOM 184 N ASN 17 1.844 8.473 6.032 1.00 0.00 N ATOM 186 CA ASN 17 1.680 9.855 5.541 1.00 0.00 C ATOM 187 CB ASN 17 3.019 10.611 5.603 1.00 0.00 C ATOM 188 CG ASN 17 3.519 10.819 7.029 1.00 0.00 C ATOM 189 OD1 ASN 17 3.214 11.830 7.665 1.00 0.00 O ATOM 190 ND2 ASN 17 4.304 9.868 7.527 1.00 0.00 N ATOM 193 C ASN 17 1.127 9.897 4.107 1.00 0.00 C ATOM 194 O ASN 17 0.425 10.849 3.741 1.00 0.00 O ATOM 195 N CYS 18 1.438 8.857 3.319 1.00 0.00 N ATOM 197 CA CYS 18 1.005 8.723 1.916 1.00 0.00 C ATOM 198 CB CYS 18 2.162 8.210 1.051 1.00 0.00 C ATOM 199 SG CYS 18 3.617 9.283 1.039 1.00 0.00 S ATOM 200 C CYS 18 -0.212 7.799 1.754 1.00 0.00 C ATOM 201 O CYS 18 -1.077 8.058 0.909 1.00 0.00 O ATOM 202 N GLU 19 -0.272 6.739 2.583 1.00 0.00 N ATOM 204 CA GLU 19 -1.341 5.701 2.625 1.00 0.00 C ATOM 205 CB GLU 19 -2.654 6.243 3.235 1.00 0.00 C ATOM 206 CG GLU 19 -2.572 6.593 4.718 1.00 0.00 C ATOM 207 CD GLU 19 -3.884 7.121 5.268 1.00 0.00 C ATOM 208 OE1 GLU 19 -4.096 8.351 5.228 1.00 0.00 O ATOM 209 OE2 GLU 19 -4.702 6.306 5.744 1.00 0.00 O ATOM 210 C GLU 19 -1.641 4.954 1.308 1.00 0.00 C ATOM 211 O GLU 19 -1.779 5.581 0.249 1.00 0.00 O ATOM 212 N VAL 20 -1.725 3.618 1.396 1.00 0.00 N ATOM 214 CA VAL 20 -2.006 2.722 0.253 1.00 0.00 C ATOM 215 CB VAL 20 -0.961 1.535 0.148 1.00 0.00 C ATOM 216 CG1 VAL 20 0.393 2.064 -0.290 1.00 0.00 C ATOM 217 CG2 VAL 20 -0.805 0.781 1.491 1.00 0.00 C ATOM 218 C VAL 20 -3.450 2.168 0.277 1.00 0.00 C ATOM 219 O VAL 20 -3.995 1.916 1.361 1.00 0.00 O ATOM 220 N ARG 21 -4.052 2.007 -0.910 1.00 0.00 N ATOM 222 CA ARG 21 -5.420 1.480 -1.064 1.00 0.00 C ATOM 223 CB ARG 21 -6.308 2.497 -1.816 1.00 0.00 C ATOM 224 CG ARG 21 -7.794 2.491 -1.406 1.00 0.00 C ATOM 225 CD ARG 21 -8.628 3.490 -2.202 1.00 0.00 C ATOM 226 NE ARG 21 -8.333 4.884 -1.855 1.00 0.00 N ATOM 228 CZ ARG 21 -8.983 5.947 -2.331 1.00 0.00 C ATOM 229 NH1 ARG 21 -8.623 7.162 -1.940 1.00 0.00 N ATOM 232 NH2 ARG 21 -9.989 5.812 -3.190 1.00 0.00 N ATOM 235 C ARG 21 -5.373 0.122 -1.801 1.00 0.00 C ATOM 236 O ARG 21 -4.867 0.036 -2.930 1.00 0.00 O ATOM 237 N CYS 22 -5.861 -0.929 -1.124 1.00 0.00 N ATOM 239 CA CYS 22 -5.917 -2.311 -1.641 1.00 0.00 C ATOM 240 CB CYS 22 -4.766 -3.161 -1.068 1.00 0.00 C ATOM 241 SG CYS 22 -4.656 -3.179 0.739 1.00 0.00 S ATOM 242 C CYS 22 -7.268 -2.959 -1.297 1.00 0.00 C ATOM 243 O CYS 22 -7.939 -2.519 -0.355 1.00 0.00 O ATOM 244 N ASP 23 -7.652 -3.991 -2.062 1.00 0.00 N ATOM 246 CA ASP 23 -8.912 -4.738 -1.878 1.00 0.00 C ATOM 247 CB ASP 23 -9.679 -4.867 -3.221 1.00 0.00 C ATOM 248 CG ASP 23 -8.807 -5.375 -4.376 1.00 0.00 C ATOM 249 OD1 ASP 23 -8.222 -4.537 -5.096 1.00 0.00 O ATOM 250 OD2 ASP 23 -8.722 -6.607 -4.567 1.00 0.00 O ATOM 251 C ASP 23 -8.698 -6.116 -1.206 1.00 0.00 C ATOM 252 O ASP 23 -9.664 -6.859 -0.973 1.00 0.00 O ATOM 253 N GLU 24 -7.428 -6.416 -0.874 1.00 0.00 N ATOM 255 CA GLU 24 -6.945 -7.668 -0.223 1.00 0.00 C ATOM 256 CB GLU 24 -7.557 -7.870 1.185 1.00 0.00 C ATOM 257 CG GLU 24 -7.110 -6.847 2.226 1.00 0.00 C ATOM 258 CD GLU 24 -7.734 -7.086 3.588 1.00 0.00 C ATOM 259 OE1 GLU 24 -8.822 -6.530 3.851 1.00 0.00 O ATOM 260 OE2 GLU 24 -7.135 -7.824 4.398 1.00 0.00 O ATOM 261 C GLU 24 -7.081 -8.956 -1.072 1.00 0.00 C ATOM 262 O GLU 24 -6.652 -10.039 -0.646 1.00 0.00 O ATOM 263 N SER 25 -7.625 -8.805 -2.289 1.00 0.00 N ATOM 265 CA SER 25 -7.838 -9.905 -3.246 1.00 0.00 C ATOM 266 CB SER 25 -9.205 -9.759 -3.926 1.00 0.00 C ATOM 267 OG SER 25 -10.256 -9.788 -2.976 1.00 0.00 O ATOM 269 C SER 25 -6.726 -9.958 -4.311 1.00 0.00 C ATOM 270 O SER 25 -6.454 -11.026 -4.876 1.00 0.00 O ATOM 271 N ASN 26 -6.085 -8.804 -4.551 1.00 0.00 N ATOM 273 CA ASN 26 -4.991 -8.648 -5.529 1.00 0.00 C ATOM 274 CB ASN 26 -5.189 -7.364 -6.354 1.00 0.00 C ATOM 275 CG ASN 26 -6.390 -7.440 -7.291 1.00 0.00 C ATOM 276 OD1 ASN 26 -7.503 -7.057 -6.927 1.00 0.00 O ATOM 277 ND2 ASN 26 -6.162 -7.919 -8.511 1.00 0.00 N ATOM 280 C ASN 26 -3.611 -8.626 -4.846 1.00 0.00 C ATOM 281 O ASN 26 -3.517 -8.327 -3.651 1.00 0.00 O ATOM 282 N HIS 27 -2.560 -8.945 -5.618 1.00 0.00 N ATOM 284 CA HIS 27 -1.162 -8.987 -5.147 1.00 0.00 C ATOM 285 CG HIS 27 -0.578 -10.353 -7.251 1.00 0.00 C ATOM 286 CD2 HIS 27 -1.200 -11.302 -7.991 1.00 0.00 C ATOM 287 ND1 HIS 27 -0.038 -9.460 -8.153 1.00 0.00 N ATOM 289 CE1 HIS 27 -0.321 -9.850 -9.383 1.00 0.00 C ATOM 290 NE2 HIS 27 -1.026 -10.966 -9.312 1.00 0.00 N ATOM 292 C HIS 27 -0.376 -7.673 -5.370 1.00 0.00 C ATOM 293 O HIS 27 0.720 -7.500 -4.819 1.00 0.00 O ATOM 294 CB HIS 27 -0.419 -10.204 -5.761 1.00 0.00 C ATOM 295 N CYS 28 -0.971 -6.751 -6.142 1.00 0.00 N ATOM 297 CA CYS 28 -0.378 -5.442 -6.474 1.00 0.00 C ATOM 298 CB CYS 28 -0.720 -5.060 -7.921 1.00 0.00 C ATOM 299 SG CYS 28 0.133 -3.592 -8.556 1.00 0.00 S ATOM 300 C CYS 28 -0.832 -4.330 -5.506 1.00 0.00 C ATOM 301 O CYS 28 -2.023 -4.234 -5.181 1.00 0.00 O ATOM 302 N VAL 29 0.136 -3.529 -5.035 1.00 0.00 N ATOM 304 CA VAL 29 -0.092 -2.408 -4.101 1.00 0.00 C ATOM 305 CB VAL 29 0.675 -2.645 -2.711 1.00 0.00 C ATOM 306 CG1 VAL 29 2.208 -2.658 -2.882 1.00 0.00 C ATOM 307 CG2 VAL 29 0.223 -1.645 -1.634 1.00 0.00 C ATOM 308 C VAL 29 0.260 -1.053 -4.777 1.00 0.00 C ATOM 309 O VAL 29 1.311 -0.933 -5.423 1.00 0.00 O ATOM 310 N GLU 30 -0.642 -0.072 -4.634 1.00 0.00 N ATOM 312 CA GLU 30 -0.487 1.288 -5.191 1.00 0.00 C ATOM 313 CB GLU 30 -1.588 1.591 -6.219 1.00 0.00 C ATOM 314 CG GLU 30 -1.445 0.836 -7.538 1.00 0.00 C ATOM 315 CD GLU 30 -2.519 1.205 -8.546 1.00 0.00 C ATOM 316 OE1 GLU 30 -2.316 2.175 -9.307 1.00 0.00 O ATOM 317 OE2 GLU 30 -3.562 0.519 -8.581 1.00 0.00 O ATOM 318 C GLU 30 -0.505 2.330 -4.061 1.00 0.00 C ATOM 319 O GLU 30 -1.266 2.182 -3.098 1.00 0.00 O ATOM 320 N VAL 31 0.331 3.371 -4.196 1.00 0.00 N ATOM 322 CA VAL 31 0.480 4.455 -3.198 1.00 0.00 C ATOM 323 CB VAL 31 1.992 4.664 -2.781 1.00 0.00 C ATOM 324 CG1 VAL 31 2.100 5.315 -1.390 1.00 0.00 C ATOM 325 CG2 VAL 31 2.757 3.338 -2.790 1.00 0.00 C ATOM 326 C VAL 31 -0.116 5.799 -3.678 1.00 0.00 C ATOM 327 O VAL 31 -0.130 6.081 -4.881 1.00 0.00 O ATOM 328 N ARG 32 -0.588 6.608 -2.716 1.00 0.00 N ATOM 330 CA ARG 32 -1.188 7.935 -2.957 1.00 0.00 C ATOM 331 CB ARG 32 -2.450 8.124 -2.101 1.00 0.00 C ATOM 332 CG ARG 32 -3.625 7.217 -2.468 1.00 0.00 C ATOM 333 CD ARG 32 -4.836 7.448 -1.564 1.00 0.00 C ATOM 334 NE ARG 32 -5.459 8.760 -1.768 1.00 0.00 N ATOM 336 CZ ARG 32 -6.466 9.253 -1.047 1.00 0.00 C ATOM 337 NH1 ARG 32 -6.945 10.457 -1.329 1.00 0.00 N ATOM 340 NH2 ARG 32 -7.002 8.559 -0.046 1.00 0.00 N ATOM 343 C ARG 32 -0.188 9.069 -2.656 1.00 0.00 C ATOM 344 O ARG 32 0.575 8.983 -1.683 1.00 0.00 O ATOM 345 N CYS 33 -0.188 10.101 -3.514 1.00 0.00 N ATOM 347 CA CYS 33 0.692 11.280 -3.396 1.00 0.00 C ATOM 348 CB CYS 33 1.616 11.381 -4.622 1.00 0.00 C ATOM 349 SG CYS 33 2.700 9.954 -4.859 1.00 0.00 S ATOM 350 C CYS 33 -0.138 12.571 -3.237 1.00 0.00 C ATOM 351 O CYS 33 -1.373 12.506 -3.190 1.00 0.00 O ATOM 352 N SER 34 0.544 13.725 -3.166 1.00 0.00 N ATOM 354 CA SER 34 -0.075 15.056 -3.004 1.00 0.00 C ATOM 355 CB SER 34 0.927 16.025 -2.360 1.00 0.00 C ATOM 356 OG SER 34 2.139 16.085 -3.094 1.00 0.00 O ATOM 358 C SER 34 -0.642 15.667 -4.303 1.00 0.00 C ATOM 359 O SER 34 -1.604 16.446 -4.250 1.00 0.00 O ATOM 360 N ASP 35 -0.055 15.291 -5.449 1.00 0.00 N ATOM 362 CA ASP 35 -0.468 15.773 -6.782 1.00 0.00 C ATOM 363 CB ASP 35 0.775 16.161 -7.616 1.00 0.00 C ATOM 364 CG ASP 35 0.478 17.222 -8.679 1.00 0.00 C ATOM 365 OD1 ASP 35 0.131 16.848 -9.820 1.00 0.00 O ATOM 366 OD2 ASP 35 0.608 18.429 -8.376 1.00 0.00 O ATOM 367 C ASP 35 -1.322 14.702 -7.501 1.00 0.00 C ATOM 368 O ASP 35 -2.516 14.927 -7.736 1.00 0.00 O ATOM 369 N THR 36 -0.705 13.557 -7.840 1.00 0.00 N ATOM 371 CA THR 36 -1.366 12.424 -8.517 1.00 0.00 C ATOM 372 CB THR 36 -0.722 12.105 -9.910 1.00 0.00 C ATOM 373 OG1 THR 36 0.701 11.994 -9.775 1.00 0.00 O ATOM 375 CG2 THR 36 -1.054 13.196 -10.921 1.00 0.00 C ATOM 376 C THR 36 -1.320 11.175 -7.614 1.00 0.00 C ATOM 377 O THR 36 -0.242 10.782 -7.144 1.00 0.00 O ATOM 378 N LYS 37 -2.496 10.590 -7.351 1.00 0.00 N ATOM 380 CA LYS 37 -2.640 9.393 -6.498 1.00 0.00 C ATOM 381 CB LYS 37 -3.711 9.608 -5.399 1.00 0.00 C ATOM 382 CG LYS 37 -5.056 10.225 -5.839 1.00 0.00 C ATOM 383 CD LYS 37 -6.008 10.379 -4.658 1.00 0.00 C ATOM 384 CE LYS 37 -7.347 10.988 -5.071 1.00 0.00 C ATOM 385 NZ LYS 37 -7.249 12.421 -5.483 1.00 0.00 N ATOM 389 C LYS 37 -2.902 8.080 -7.255 1.00 0.00 C ATOM 390 O LYS 37 -3.645 8.068 -8.245 1.00 0.00 O ATOM 391 N TYR 38 -2.276 6.996 -6.777 1.00 0.00 N ATOM 393 CA TYR 38 -2.418 5.644 -7.341 1.00 0.00 C ATOM 394 CB TYR 38 -1.035 5.034 -7.691 1.00 0.00 C ATOM 395 CG TYR 38 -0.204 5.772 -8.749 1.00 0.00 C ATOM 396 CD1 TYR 38 -0.310 5.444 -10.124 1.00 0.00 C ATOM 397 CE1 TYR 38 0.484 6.102 -11.104 1.00 0.00 C ATOM 398 CD2 TYR 38 0.721 6.781 -8.379 1.00 0.00 C ATOM 399 CE2 TYR 38 1.518 7.443 -9.354 1.00 0.00 C ATOM 400 CZ TYR 38 1.392 7.097 -10.709 1.00 0.00 C ATOM 401 OH TYR 38 2.161 7.734 -11.656 1.00 0.00 O ATOM 403 C TYR 38 -3.139 4.762 -6.312 1.00 0.00 C ATOM 404 O TYR 38 -2.672 4.620 -5.172 1.00 0.00 O ATOM 405 N THR 39 -4.298 4.222 -6.711 1.00 0.00 N ATOM 407 CA THR 39 -5.137 3.345 -5.871 1.00 0.00 C ATOM 408 CB THR 39 -6.431 4.074 -5.370 1.00 0.00 C ATOM 409 OG1 THR 39 -7.124 4.655 -6.484 1.00 0.00 O ATOM 411 CG2 THR 39 -6.090 5.169 -4.364 1.00 0.00 C ATOM 412 C THR 39 -5.526 2.087 -6.669 1.00 0.00 C ATOM 413 O THR 39 -5.617 2.144 -7.903 1.00 0.00 O ATOM 414 N LEU 40 -5.732 0.965 -5.963 1.00 0.00 N ATOM 416 CA LEU 40 -6.109 -0.327 -6.564 1.00 0.00 C ATOM 417 CB LEU 40 -5.249 -1.472 -5.953 1.00 0.00 C ATOM 418 CG LEU 40 -4.718 -2.797 -6.582 1.00 0.00 C ATOM 419 CD1 LEU 40 -5.841 -3.749 -7.027 1.00 0.00 C ATOM 420 CD2 LEU 40 -3.718 -2.557 -7.727 1.00 0.00 C ATOM 421 C LEU 40 -7.611 -0.604 -6.357 1.00 0.00 C ATOM 422 O LEU 40 -8.226 -1.323 -7.155 1.00 0.00 O ATOM 423 N CYS 41 -8.184 -0.003 -5.298 1.00 0.00 N ATOM 425 CA CYS 41 -9.609 -0.104 -4.876 1.00 0.00 C ATOM 426 CB CYS 41 -10.542 0.669 -5.832 1.00 0.00 C ATOM 427 SG CYS 41 -10.189 2.439 -5.948 1.00 0.00 S ATOM 428 C CYS 41 -10.171 -1.507 -4.613 1.00 0.00 C ATOM 429 O CYS 41 -10.880 -1.666 -3.597 1.00 0.00 O ATOM 430 OXT CYS 41 -9.899 -2.428 -5.414 1.00 0.00 O TER END