####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS282_4 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS282_4.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 1 - 23 4.89 9.75 LCS_AVERAGE: 48.78 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 1 - 17 1.84 9.81 LCS_AVERAGE: 27.19 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 2 - 16 0.60 9.78 LCS_AVERAGE: 19.69 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 17 23 0 3 3 3 7 10 17 17 18 19 20 23 26 29 30 33 33 34 34 34 LCS_GDT Q 2 Q 2 15 17 23 6 15 15 15 16 17 18 20 22 25 27 28 30 31 32 33 33 34 36 37 LCS_GDT E 3 E 3 15 17 23 6 15 15 15 16 17 18 20 22 25 27 28 30 31 32 33 33 34 36 37 LCS_GDT T 4 T 4 15 17 23 7 15 15 15 16 17 18 20 22 25 27 28 30 31 32 33 33 34 36 37 LCS_GDT R 5 R 5 15 17 23 10 15 15 15 16 17 18 20 22 25 27 28 30 31 32 33 33 34 36 37 LCS_GDT K 6 K 6 15 17 23 10 15 15 15 16 17 18 20 22 25 27 28 30 31 32 33 33 34 36 37 LCS_GDT K 7 K 7 15 17 23 10 15 15 15 16 17 18 20 22 25 27 28 30 31 32 33 33 34 36 37 LCS_GDT C 8 C 8 15 17 23 10 15 15 15 16 17 18 20 22 25 27 28 30 31 32 33 33 34 36 37 LCS_GDT T 9 T 9 15 17 23 10 15 15 15 16 17 18 20 22 25 27 28 30 31 32 33 33 34 36 37 LCS_GDT E 10 E 10 15 17 23 10 15 15 15 16 17 18 20 22 25 27 28 30 31 32 33 33 34 36 37 LCS_GDT M 11 M 11 15 17 23 10 15 15 15 16 17 18 20 22 25 27 28 30 31 32 33 33 34 36 37 LCS_GDT K 12 K 12 15 17 23 10 15 15 15 16 17 18 20 22 25 27 28 30 31 32 33 33 34 36 37 LCS_GDT K 13 K 13 15 17 23 10 15 15 15 16 17 18 20 22 25 27 28 30 31 32 33 33 34 36 37 LCS_GDT K 14 K 14 15 17 23 10 15 15 15 16 17 18 20 22 25 27 28 30 31 32 33 33 34 36 37 LCS_GDT F 15 F 15 15 17 23 10 15 15 15 16 17 18 20 22 25 27 28 30 31 32 33 33 34 36 37 LCS_GDT K 16 K 16 15 17 23 6 15 15 15 16 17 18 20 22 25 27 28 30 31 32 33 33 34 36 37 LCS_GDT N 17 N 17 3 17 23 3 3 4 7 11 14 17 20 22 25 27 28 30 31 32 33 33 34 36 37 LCS_GDT C 18 C 18 3 5 23 3 3 3 6 8 10 12 20 22 25 27 28 30 31 32 33 33 34 36 37 LCS_GDT E 19 E 19 3 6 23 3 3 4 7 10 12 16 18 18 25 27 28 30 31 32 33 33 34 36 37 LCS_GDT V 20 V 20 4 6 23 3 4 4 6 16 16 17 18 18 23 27 28 30 31 32 33 33 34 36 37 LCS_GDT R 21 R 21 4 6 23 3 4 4 5 8 15 16 17 18 18 21 22 26 29 32 33 33 34 36 37 LCS_GDT C 22 C 22 4 6 23 3 4 4 5 7 8 10 12 12 13 17 21 23 25 27 31 32 34 36 37 LCS_GDT D 23 D 23 4 9 23 3 4 4 7 9 10 10 12 12 13 15 21 23 25 27 29 31 32 33 36 LCS_GDT E 24 E 24 4 9 17 3 4 5 7 9 10 10 12 12 13 15 21 23 25 25 26 28 30 33 34 LCS_GDT S 25 S 25 4 9 17 3 4 5 6 9 10 10 12 12 14 16 21 23 25 27 29 30 32 33 34 LCS_GDT N 26 N 26 4 9 17 3 4 5 5 9 10 10 12 13 17 18 20 23 26 27 31 32 34 36 37 LCS_GDT H 27 H 27 4 9 17 3 4 5 7 9 10 10 12 14 17 21 22 25 26 28 31 33 34 36 37 LCS_GDT C 28 C 28 5 9 17 3 4 5 7 9 10 12 15 17 19 25 28 30 31 32 33 33 34 36 37 LCS_GDT V 29 V 29 5 9 17 3 4 5 7 9 10 11 15 17 19 25 28 30 31 32 33 33 34 36 37 LCS_GDT E 30 E 30 5 9 17 3 4 5 7 9 14 18 20 22 25 27 28 30 31 32 33 33 34 36 37 LCS_GDT V 31 V 31 5 9 17 3 4 5 7 9 10 10 12 14 15 18 21 28 31 31 33 33 34 36 37 LCS_GDT R 32 R 32 5 8 17 3 4 5 6 9 10 11 20 22 25 27 28 30 31 32 33 33 34 36 37 LCS_GDT C 33 C 33 5 6 17 3 4 5 6 8 9 11 15 22 25 27 28 30 31 32 33 33 34 36 37 LCS_GDT S 34 S 34 5 6 16 3 4 5 5 7 9 17 20 22 25 27 28 30 31 32 33 33 34 36 37 LCS_GDT D 35 D 35 5 6 15 3 3 5 5 6 8 9 12 19 25 27 28 30 31 32 33 33 34 36 37 LCS_GDT T 36 T 36 3 6 15 3 3 6 14 15 17 18 20 22 25 27 28 30 31 32 33 33 34 36 37 LCS_GDT K 37 K 37 3 6 15 3 3 4 8 15 17 18 20 22 25 27 28 30 31 32 33 33 34 36 37 LCS_GDT Y 38 Y 38 4 5 15 3 3 4 4 5 7 9 12 14 19 27 28 30 31 32 33 33 34 36 37 LCS_GDT T 39 T 39 4 5 15 0 3 4 4 5 7 8 11 13 17 21 27 30 31 32 33 33 34 36 37 LCS_GDT L 40 L 40 4 5 15 2 3 4 4 5 5 8 11 12 15 19 23 23 28 32 33 33 34 36 37 LCS_GDT C 41 C 41 4 5 15 0 3 4 4 5 5 7 10 12 14 17 21 23 25 27 30 31 33 35 37 LCS_AVERAGE LCS_A: 31.89 ( 19.69 27.19 48.78 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 15 15 15 16 17 18 20 22 25 27 28 30 31 32 33 33 34 36 37 GDT PERCENT_AT 24.39 36.59 36.59 36.59 39.02 41.46 43.90 48.78 53.66 60.98 65.85 68.29 73.17 75.61 78.05 80.49 80.49 82.93 87.80 90.24 GDT RMS_LOCAL 0.33 0.60 0.60 0.60 1.02 1.73 1.88 2.39 2.74 3.18 3.45 3.75 4.07 4.17 4.50 4.59 4.60 4.82 5.85 6.08 GDT RMS_ALL_AT 9.83 9.78 9.78 9.78 9.99 9.10 9.05 9.18 9.35 9.40 9.38 9.04 8.84 8.91 8.64 8.71 9.05 8.92 7.98 7.89 # Checking swapping # possible swapping detected: E 3 E 3 # possible swapping detected: E 10 E 10 # possible swapping detected: F 15 F 15 # possible swapping detected: D 23 D 23 # possible swapping detected: E 24 E 24 # possible swapping detected: E 30 E 30 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 7.143 0 0.068 0.107 10.470 1.818 1.212 10.470 LGA Q 2 Q 2 1.155 0 0.660 0.996 6.616 53.636 26.465 6.616 LGA E 3 E 3 1.244 0 0.051 1.214 5.859 69.545 42.626 3.086 LGA T 4 T 4 0.442 0 0.028 1.164 3.101 95.455 76.104 1.849 LGA R 5 R 5 0.893 0 0.020 1.039 6.378 81.818 46.116 4.092 LGA K 6 K 6 1.161 0 0.030 1.248 9.141 69.545 37.172 9.141 LGA K 7 K 7 1.679 0 0.045 0.845 3.476 51.364 40.808 3.476 LGA C 8 C 8 1.726 0 0.098 0.122 3.205 61.818 48.788 3.205 LGA T 9 T 9 1.074 0 0.017 0.040 2.812 73.636 58.701 2.182 LGA E 10 E 10 1.860 0 0.029 0.945 6.561 54.545 27.475 6.561 LGA M 11 M 11 1.821 0 0.034 0.583 4.274 54.545 37.500 3.523 LGA K 12 K 12 1.092 0 0.050 0.608 3.010 73.636 53.333 3.010 LGA K 13 K 13 1.515 0 0.030 0.591 4.935 65.909 36.970 4.336 LGA K 14 K 14 1.617 0 0.090 0.622 4.424 51.364 32.525 4.154 LGA F 15 F 15 2.641 0 0.521 0.870 5.159 24.091 27.107 2.597 LGA K 16 K 16 3.325 0 0.218 1.145 9.298 30.455 13.535 9.298 LGA N 17 N 17 4.448 0 0.606 0.571 6.775 5.909 2.955 6.775 LGA C 18 C 18 5.447 0 0.061 0.758 9.919 1.364 0.909 9.919 LGA E 19 E 19 6.120 0 0.296 0.870 6.120 1.364 2.222 4.687 LGA V 20 V 20 5.954 0 0.177 0.934 9.630 0.000 0.260 4.952 LGA R 21 R 21 9.535 0 0.178 1.284 15.291 0.000 0.000 15.291 LGA C 22 C 22 13.267 0 0.358 0.805 16.958 0.000 0.000 13.867 LGA D 23 D 23 18.323 0 0.655 1.319 21.587 0.000 0.000 18.776 LGA E 24 E 24 23.522 0 0.643 0.868 28.542 0.000 0.000 27.977 LGA S 25 S 25 26.138 0 0.187 0.596 26.785 0.000 0.000 26.324 LGA N 26 N 26 20.313 0 0.053 1.151 22.074 0.000 0.000 20.535 LGA H 27 H 27 15.890 0 0.494 1.434 23.354 0.000 0.000 22.896 LGA C 28 C 28 8.756 0 0.240 0.274 11.530 0.000 0.000 9.087 LGA V 29 V 29 7.963 0 0.111 1.104 12.133 1.364 0.779 10.785 LGA E 30 E 30 3.630 0 0.241 0.399 7.418 2.727 14.747 3.396 LGA V 31 V 31 7.050 0 0.160 1.098 9.815 0.455 0.260 8.803 LGA R 32 R 32 5.423 0 0.163 1.167 6.663 0.000 3.471 5.510 LGA C 33 C 33 6.600 0 0.144 0.825 7.335 0.000 0.000 6.836 LGA S 34 S 34 4.867 0 0.431 0.645 6.218 0.909 1.515 4.496 LGA D 35 D 35 5.482 0 0.577 0.897 7.224 1.818 0.909 6.104 LGA T 36 T 36 2.593 0 0.049 1.249 3.298 42.727 39.740 1.569 LGA K 37 K 37 2.780 0 0.231 1.302 6.233 16.364 11.717 3.878 LGA Y 38 Y 38 6.014 0 0.181 0.786 14.831 4.091 1.364 14.831 LGA T 39 T 39 7.160 0 0.177 0.829 10.668 0.000 0.000 9.065 LGA L 40 L 40 8.775 0 0.522 1.261 10.934 0.000 0.000 5.030 LGA C 41 C 41 14.996 0 0.488 1.306 18.542 0.000 0.000 16.710 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 7.691 7.603 8.496 24.202 16.763 7.450 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 20 2.39 50.610 44.954 0.803 LGA_LOCAL RMSD: 2.389 Number of atoms: 20 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 9.179 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 7.691 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.075106 * X + -0.768083 * Y + -0.635930 * Z + 1.392465 Y_new = -0.820501 * X + 0.410021 * Y + -0.398323 * Z + 2.159382 Z_new = 0.566690 * X + 0.491865 * Y + -0.661008 * Z + -1.138660 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.662079 -0.602482 2.501870 [DEG: -95.2301 -34.5197 143.3466 ] ZXZ: -1.011217 2.292958 0.855967 [DEG: -57.9385 131.3768 49.0433 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS282_4 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS282_4.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 20 2.39 44.954 7.69 REMARK ---------------------------------------------------------- MOLECULE T0955TS282_4 PFRMAT TS TARGET T0955 MODEL 4 PARENT N/A ATOM 1 CB SER 1 -2.749 -12.389 6.476 1.00 0.00 C ATOM 2 OG SER 1 -3.532 -12.129 7.628 1.00 0.00 O ATOM 4 C SER 1 -2.733 -13.216 4.105 1.00 0.00 C ATOM 5 O SER 1 -2.143 -14.290 3.930 1.00 0.00 O ATOM 8 N SER 1 -4.188 -14.297 5.817 1.00 0.00 N ATOM 10 CA SER 1 -3.593 -13.008 5.358 1.00 0.00 C ATOM 11 N GLN 2 -2.678 -12.188 3.247 1.00 0.00 N ATOM 13 CA GLN 2 -1.906 -12.199 1.988 1.00 0.00 C ATOM 14 CB GLN 2 -2.786 -11.750 0.788 1.00 0.00 C ATOM 15 CG GLN 2 -3.685 -10.493 0.967 1.00 0.00 C ATOM 16 CD GLN 2 -5.129 -10.827 1.330 1.00 0.00 C ATOM 17 OE1 GLN 2 -5.992 -10.932 0.458 1.00 0.00 O ATOM 18 NE2 GLN 2 -5.393 -10.993 2.622 1.00 0.00 N ATOM 21 C GLN 2 -0.592 -11.389 2.061 1.00 0.00 C ATOM 22 O GLN 2 -0.440 -10.536 2.943 1.00 0.00 O ATOM 23 N GLU 3 0.332 -11.671 1.129 1.00 0.00 N ATOM 25 CA GLU 3 1.658 -11.024 1.019 1.00 0.00 C ATOM 26 CB GLU 3 2.559 -11.802 0.051 1.00 0.00 C ATOM 27 CG GLU 3 3.002 -13.176 0.553 1.00 0.00 C ATOM 28 CD GLU 3 3.890 -13.904 -0.439 1.00 0.00 C ATOM 29 OE1 GLU 3 3.352 -14.645 -1.289 1.00 0.00 O ATOM 30 OE2 GLU 3 5.126 -13.738 -0.368 1.00 0.00 O ATOM 31 C GLU 3 1.624 -9.540 0.610 1.00 0.00 C ATOM 32 O GLU 3 2.421 -8.743 1.120 1.00 0.00 O ATOM 33 N THR 4 0.686 -9.184 -0.282 1.00 0.00 N ATOM 35 CA THR 4 0.501 -7.809 -0.802 1.00 0.00 C ATOM 36 CB THR 4 -0.529 -7.769 -1.970 1.00 0.00 C ATOM 37 OG1 THR 4 -1.730 -8.445 -1.580 1.00 0.00 O ATOM 39 CG2 THR 4 0.045 -8.425 -3.222 1.00 0.00 C ATOM 40 C THR 4 0.107 -6.779 0.277 1.00 0.00 C ATOM 41 O THR 4 0.656 -5.668 0.304 1.00 0.00 O ATOM 42 N ARG 5 -0.810 -7.177 1.174 1.00 0.00 N ATOM 44 CA ARG 5 -1.301 -6.342 2.289 1.00 0.00 C ATOM 45 CB ARG 5 -2.543 -6.967 2.938 1.00 0.00 C ATOM 46 CG ARG 5 -3.814 -6.880 2.092 1.00 0.00 C ATOM 47 CD ARG 5 -5.029 -7.463 2.814 1.00 0.00 C ATOM 48 NE ARG 5 -5.464 -6.646 3.951 1.00 0.00 N ATOM 50 CZ ARG 5 -6.496 -6.925 4.748 1.00 0.00 C ATOM 51 NH1 ARG 5 -6.791 -6.105 5.748 1.00 0.00 N ATOM 54 NH2 ARG 5 -7.237 -8.013 4.560 1.00 0.00 N ATOM 57 C ARG 5 -0.220 -6.098 3.353 1.00 0.00 C ATOM 58 O ARG 5 -0.118 -4.990 3.886 1.00 0.00 O ATOM 59 N LYS 6 0.604 -7.126 3.612 1.00 0.00 N ATOM 61 CA LYS 6 1.707 -7.085 4.597 1.00 0.00 C ATOM 62 CB LYS 6 2.255 -8.496 4.861 1.00 0.00 C ATOM 63 CG LYS 6 1.305 -9.422 5.612 1.00 0.00 C ATOM 64 CD LYS 6 1.930 -10.790 5.835 1.00 0.00 C ATOM 65 CE LYS 6 0.986 -11.712 6.589 1.00 0.00 C ATOM 66 NZ LYS 6 1.585 -13.056 6.815 1.00 0.00 N ATOM 70 C LYS 6 2.854 -6.144 4.185 1.00 0.00 C ATOM 71 O LYS 6 3.307 -5.329 5.003 1.00 0.00 O ATOM 72 N LYS 7 3.283 -6.234 2.914 1.00 0.00 N ATOM 74 CA LYS 7 4.364 -5.390 2.369 1.00 0.00 C ATOM 75 CB LYS 7 4.947 -5.948 1.047 1.00 0.00 C ATOM 76 CG LYS 7 3.982 -6.245 -0.114 1.00 0.00 C ATOM 77 CD LYS 7 4.770 -6.540 -1.388 1.00 0.00 C ATOM 78 CE LYS 7 3.875 -6.952 -2.550 1.00 0.00 C ATOM 79 NZ LYS 7 3.361 -8.346 -2.418 1.00 0.00 N ATOM 83 C LYS 7 3.981 -3.903 2.245 1.00 0.00 C ATOM 84 O LYS 7 4.796 -3.032 2.561 1.00 0.00 O ATOM 85 N CYS 8 2.736 -3.633 1.819 1.00 0.00 N ATOM 87 CA CYS 8 2.204 -2.262 1.672 1.00 0.00 C ATOM 88 CB CYS 8 0.941 -2.231 0.816 1.00 0.00 C ATOM 89 SG CYS 8 0.129 -0.623 0.600 1.00 0.00 S ATOM 90 C CYS 8 1.994 -1.525 3.008 1.00 0.00 C ATOM 91 O CYS 8 2.167 -0.305 3.055 1.00 0.00 O ATOM 92 N THR 9 1.594 -2.252 4.066 1.00 0.00 N ATOM 94 CA THR 9 1.386 -1.675 5.417 1.00 0.00 C ATOM 95 CB THR 9 0.660 -2.684 6.379 1.00 0.00 C ATOM 96 OG1 THR 9 -0.515 -3.187 5.733 1.00 0.00 O ATOM 98 CG2 THR 9 0.214 -2.002 7.687 1.00 0.00 C ATOM 99 C THR 9 2.763 -1.236 5.981 1.00 0.00 C ATOM 100 O THR 9 2.871 -0.162 6.588 1.00 0.00 O ATOM 101 N GLU 10 3.797 -2.059 5.736 1.00 0.00 N ATOM 103 CA GLU 10 5.190 -1.784 6.153 1.00 0.00 C ATOM 104 CB GLU 10 6.081 -3.015 5.935 1.00 0.00 C ATOM 105 CG GLU 10 5.779 -4.197 6.854 1.00 0.00 C ATOM 106 CD GLU 10 6.685 -5.386 6.599 1.00 0.00 C ATOM 107 OE1 GLU 10 6.325 -6.243 5.765 1.00 0.00 O ATOM 108 OE2 GLU 10 7.759 -5.466 7.234 1.00 0.00 O ATOM 109 C GLU 10 5.710 -0.598 5.322 1.00 0.00 C ATOM 110 O GLU 10 6.425 0.270 5.839 1.00 0.00 O ATOM 111 N MET 11 5.302 -0.573 4.043 1.00 0.00 N ATOM 113 CA MET 11 5.632 0.474 3.056 1.00 0.00 C ATOM 114 CG MET 11 6.395 -0.483 0.768 1.00 0.00 C ATOM 115 SD MET 11 7.160 -2.054 1.260 1.00 0.00 S ATOM 116 CE MET 11 8.719 -1.483 1.943 1.00 0.00 C ATOM 117 C MET 11 4.944 1.809 3.383 1.00 0.00 C ATOM 118 O MET 11 5.517 2.870 3.149 1.00 0.00 O ATOM 119 CB MET 11 5.240 0.032 1.640 1.00 0.00 C ATOM 120 N LYS 12 3.714 1.727 3.914 1.00 0.00 N ATOM 122 CA LYS 12 2.870 2.876 4.307 1.00 0.00 C ATOM 123 CB LYS 12 1.465 2.368 4.695 1.00 0.00 C ATOM 124 CG LYS 12 0.452 3.402 5.220 1.00 0.00 C ATOM 125 CD LYS 12 -0.817 2.728 5.715 1.00 0.00 C ATOM 126 CE LYS 12 -1.783 3.741 6.309 1.00 0.00 C ATOM 127 NZ LYS 12 -3.032 3.095 6.799 1.00 0.00 N ATOM 131 C LYS 12 3.523 3.673 5.453 1.00 0.00 C ATOM 132 O LYS 12 3.514 4.911 5.429 1.00 0.00 O ATOM 133 N LYS 13 4.074 2.949 6.436 1.00 0.00 N ATOM 135 CA LYS 13 4.769 3.540 7.592 1.00 0.00 C ATOM 136 CB LYS 13 5.076 2.473 8.653 1.00 0.00 C ATOM 137 CG LYS 13 3.851 1.914 9.370 1.00 0.00 C ATOM 138 CD LYS 13 4.245 0.864 10.404 1.00 0.00 C ATOM 139 CE LYS 13 3.033 0.290 11.134 1.00 0.00 C ATOM 140 NZ LYS 13 2.155 -0.552 10.266 1.00 0.00 N ATOM 144 C LYS 13 6.073 4.190 7.100 1.00 0.00 C ATOM 145 O LYS 13 6.442 5.275 7.560 1.00 0.00 O ATOM 146 N LYS 14 6.750 3.502 6.167 1.00 0.00 N ATOM 148 CA LYS 14 8.016 3.938 5.544 1.00 0.00 C ATOM 149 CB LYS 14 8.691 2.731 4.870 1.00 0.00 C ATOM 150 CG LYS 14 9.311 1.727 5.836 1.00 0.00 C ATOM 151 CD LYS 14 9.957 0.565 5.088 1.00 0.00 C ATOM 152 CE LYS 14 10.584 -0.454 6.037 1.00 0.00 C ATOM 153 NZ LYS 14 11.788 0.062 6.756 1.00 0.00 N ATOM 157 C LYS 14 7.950 5.112 4.533 1.00 0.00 C ATOM 158 O LYS 14 8.695 6.088 4.677 1.00 0.00 O ATOM 159 N PHE 15 7.058 4.999 3.535 1.00 0.00 N ATOM 161 CA PHE 15 6.860 5.989 2.456 1.00 0.00 C ATOM 162 CB PHE 15 6.235 5.288 1.220 1.00 0.00 C ATOM 163 CG PHE 15 7.227 4.500 0.366 1.00 0.00 C ATOM 164 CD1 PHE 15 7.845 5.102 -0.758 1.00 0.00 C ATOM 165 CD2 PHE 15 7.526 3.147 0.656 1.00 0.00 C ATOM 166 CE1 PHE 15 8.747 4.371 -1.580 1.00 0.00 C ATOM 167 CE2 PHE 15 8.427 2.404 -0.159 1.00 0.00 C ATOM 168 CZ PHE 15 9.038 3.019 -1.279 1.00 0.00 C ATOM 169 C PHE 15 6.136 7.322 2.722 1.00 0.00 C ATOM 170 O PHE 15 6.716 8.382 2.450 1.00 0.00 O ATOM 171 N LYS 16 4.922 7.253 3.304 1.00 0.00 N ATOM 173 CA LYS 16 4.021 8.392 3.654 1.00 0.00 C ATOM 174 CB LYS 16 4.132 9.594 2.679 1.00 0.00 C ATOM 175 CG LYS 16 4.848 10.807 3.260 1.00 0.00 C ATOM 176 CD LYS 16 4.918 11.945 2.247 1.00 0.00 C ATOM 177 CE LYS 16 5.632 13.173 2.809 1.00 0.00 C ATOM 178 NZ LYS 16 7.095 12.963 3.032 1.00 0.00 N ATOM 182 C LYS 16 2.530 7.993 3.751 1.00 0.00 C ATOM 183 O LYS 16 1.933 8.108 4.828 1.00 0.00 O ATOM 184 N ASN 17 1.954 7.527 2.630 1.00 0.00 N ATOM 186 CA ASN 17 0.528 7.148 2.506 1.00 0.00 C ATOM 187 CB ASN 17 -0.095 7.939 1.333 1.00 0.00 C ATOM 188 CG ASN 17 -0.122 9.442 1.587 1.00 0.00 C ATOM 189 OD1 ASN 17 -1.127 9.987 2.044 1.00 0.00 O ATOM 190 ND2 ASN 17 0.988 10.117 1.294 1.00 0.00 N ATOM 193 C ASN 17 0.257 5.629 2.355 1.00 0.00 C ATOM 194 O ASN 17 1.197 4.834 2.410 1.00 0.00 O ATOM 195 N CYS 18 -1.013 5.256 2.112 1.00 0.00 N ATOM 197 CA CYS 18 -1.499 3.862 1.956 1.00 0.00 C ATOM 198 CB CYS 18 -2.831 3.730 2.674 1.00 0.00 C ATOM 199 SG CYS 18 -3.427 2.032 2.912 1.00 0.00 S ATOM 200 C CYS 18 -1.732 3.430 0.504 1.00 0.00 C ATOM 201 O CYS 18 -1.652 4.267 -0.395 1.00 0.00 O ATOM 202 N GLU 19 -2.069 2.135 0.293 1.00 0.00 N ATOM 204 CA GLU 19 -2.370 1.503 -1.033 1.00 0.00 C ATOM 205 CB GLU 19 -3.638 2.129 -1.633 1.00 0.00 C ATOM 206 CG GLU 19 -4.907 1.716 -0.879 1.00 0.00 C ATOM 207 CD GLU 19 -6.104 2.584 -1.195 1.00 0.00 C ATOM 208 OE1 GLU 19 -6.794 2.318 -2.201 1.00 0.00 O ATOM 209 OE2 GLU 19 -6.361 3.534 -0.426 1.00 0.00 O ATOM 210 C GLU 19 -1.168 1.650 -1.974 1.00 0.00 C ATOM 211 O GLU 19 -0.490 2.653 -1.855 1.00 0.00 O ATOM 212 N VAL 20 -0.892 0.749 -2.931 1.00 0.00 N ATOM 214 CA VAL 20 0.344 0.998 -3.706 1.00 0.00 C ATOM 215 CB VAL 20 1.283 -0.248 -3.717 1.00 0.00 C ATOM 216 CG1 VAL 20 1.843 -0.525 -2.342 1.00 0.00 C ATOM 217 CG2 VAL 20 0.543 -1.512 -4.225 1.00 0.00 C ATOM 218 C VAL 20 0.477 1.605 -5.117 1.00 0.00 C ATOM 219 O VAL 20 0.143 0.995 -6.137 1.00 0.00 O ATOM 220 N ARG 21 0.893 2.877 -5.081 1.00 0.00 N ATOM 222 CA ARG 21 1.349 3.758 -6.175 1.00 0.00 C ATOM 223 CB ARG 21 0.314 4.686 -6.838 1.00 0.00 C ATOM 224 CG ARG 21 0.842 5.500 -8.047 1.00 0.00 C ATOM 225 CD ARG 21 -0.260 6.035 -8.972 1.00 0.00 C ATOM 226 NE ARG 21 -0.186 5.520 -10.350 1.00 0.00 N ATOM 228 CZ ARG 21 0.666 5.931 -11.298 1.00 0.00 C ATOM 229 NH1 ARG 21 0.620 5.384 -12.504 1.00 0.00 N ATOM 232 NH2 ARG 21 1.576 6.867 -11.043 1.00 0.00 N ATOM 235 C ARG 21 2.227 4.571 -5.263 1.00 0.00 C ATOM 236 O ARG 21 1.744 5.007 -4.228 1.00 0.00 O ATOM 237 N CYS 22 3.502 4.745 -5.548 1.00 0.00 N ATOM 239 CA CYS 22 4.273 5.565 -4.635 1.00 0.00 C ATOM 240 CB CYS 22 4.963 4.708 -3.580 1.00 0.00 C ATOM 241 SG CYS 22 6.108 3.477 -4.246 1.00 0.00 S ATOM 242 C CYS 22 5.153 6.504 -5.441 1.00 0.00 C ATOM 243 O CYS 22 6.383 6.381 -5.495 1.00 0.00 O ATOM 244 N ASP 23 4.426 7.398 -6.130 1.00 0.00 N ATOM 246 CA ASP 23 4.870 8.480 -7.032 1.00 0.00 C ATOM 247 CB ASP 23 3.828 9.616 -6.937 1.00 0.00 C ATOM 248 CG ASP 23 4.054 10.734 -7.969 1.00 0.00 C ATOM 249 OD1 ASP 23 3.809 10.517 -9.177 1.00 0.00 O ATOM 250 OD2 ASP 23 4.489 11.832 -7.562 1.00 0.00 O ATOM 251 C ASP 23 6.308 9.014 -6.841 1.00 0.00 C ATOM 252 O ASP 23 6.927 9.498 -7.798 1.00 0.00 O ATOM 253 N GLU 24 6.813 8.898 -5.609 1.00 0.00 N ATOM 255 CA GLU 24 8.158 9.330 -5.215 1.00 0.00 C ATOM 256 CB GLU 24 8.110 9.920 -3.799 1.00 0.00 C ATOM 257 CG GLU 24 7.392 11.265 -3.689 1.00 0.00 C ATOM 258 CD GLU 24 7.373 11.804 -2.270 1.00 0.00 C ATOM 259 OE1 GLU 24 6.417 11.497 -1.528 1.00 0.00 O ATOM 260 OE2 GLU 24 8.313 12.539 -1.898 1.00 0.00 O ATOM 261 C GLU 24 9.173 8.167 -5.297 1.00 0.00 C ATOM 262 O GLU 24 8.876 7.046 -4.864 1.00 0.00 O ATOM 263 N SER 25 10.347 8.453 -5.887 1.00 0.00 N ATOM 265 CA SER 25 11.505 7.538 -6.104 1.00 0.00 C ATOM 266 CB SER 25 12.125 7.045 -4.773 1.00 0.00 C ATOM 267 OG SER 25 11.228 6.228 -4.039 1.00 0.00 O ATOM 269 C SER 25 11.407 6.381 -7.136 1.00 0.00 C ATOM 270 O SER 25 11.834 6.562 -8.282 1.00 0.00 O ATOM 271 N ASN 26 10.856 5.221 -6.737 1.00 0.00 N ATOM 273 CA ASN 26 10.737 4.026 -7.604 1.00 0.00 C ATOM 274 CB ASN 26 11.268 2.781 -6.867 1.00 0.00 C ATOM 275 CG ASN 26 12.765 2.849 -6.588 1.00 0.00 C ATOM 276 OD1 ASN 26 13.581 2.400 -7.397 1.00 0.00 O ATOM 277 ND2 ASN 26 13.131 3.396 -5.433 1.00 0.00 N ATOM 280 C ASN 26 9.334 3.728 -8.164 1.00 0.00 C ATOM 281 O ASN 26 9.209 3.140 -9.247 1.00 0.00 O ATOM 282 N HIS 27 8.296 4.163 -7.433 1.00 0.00 N ATOM 284 CA HIS 27 6.848 3.999 -7.740 1.00 0.00 C ATOM 285 CG HIS 27 6.959 5.417 -9.897 1.00 0.00 C ATOM 286 CD2 HIS 27 6.548 5.191 -11.169 1.00 0.00 C ATOM 287 ND1 HIS 27 8.217 5.972 -9.996 1.00 0.00 N ATOM 289 CE1 HIS 27 8.554 6.078 -11.269 1.00 0.00 C ATOM 290 NE2 HIS 27 7.559 5.611 -12.001 1.00 0.00 N ATOM 292 C HIS 27 6.229 2.652 -8.196 1.00 0.00 C ATOM 293 O HIS 27 6.897 1.795 -8.787 1.00 0.00 O ATOM 294 CB HIS 27 6.273 5.181 -8.578 1.00 0.00 C ATOM 295 N CYS 28 4.931 2.533 -7.885 1.00 0.00 N ATOM 297 CA CYS 28 4.007 1.407 -8.133 1.00 0.00 C ATOM 298 CB CYS 28 3.690 0.697 -6.810 1.00 0.00 C ATOM 299 SG CYS 28 5.134 0.010 -5.965 1.00 0.00 S ATOM 300 C CYS 28 2.742 2.123 -8.630 1.00 0.00 C ATOM 301 O CYS 28 2.734 3.351 -8.590 1.00 0.00 O ATOM 302 N VAL 29 1.812 1.435 -9.311 1.00 0.00 N ATOM 304 CA VAL 29 0.540 2.073 -9.752 1.00 0.00 C ATOM 305 CB VAL 29 0.307 1.921 -11.279 1.00 0.00 C ATOM 306 CG1 VAL 29 0.212 0.440 -11.699 1.00 0.00 C ATOM 307 CG2 VAL 29 -0.917 2.717 -11.766 1.00 0.00 C ATOM 308 C VAL 29 -0.675 1.712 -8.835 1.00 0.00 C ATOM 309 O VAL 29 -0.783 0.571 -8.373 1.00 0.00 O ATOM 310 N GLU 30 -1.611 2.667 -8.692 1.00 0.00 N ATOM 312 CA GLU 30 -2.759 2.618 -7.751 1.00 0.00 C ATOM 313 CB GLU 30 -2.500 3.626 -6.624 1.00 0.00 C ATOM 314 CG GLU 30 -2.470 3.018 -5.221 1.00 0.00 C ATOM 315 CD GLU 30 -2.116 4.017 -4.169 1.00 0.00 C ATOM 316 OE1 GLU 30 -3.006 4.759 -3.699 1.00 0.00 O ATOM 317 OE2 GLU 30 -0.935 4.053 -3.796 1.00 0.00 O ATOM 318 C GLU 30 -4.298 2.573 -7.895 1.00 0.00 C ATOM 319 O GLU 30 -4.902 2.824 -8.944 1.00 0.00 O ATOM 320 N VAL 31 -4.831 2.137 -6.740 1.00 0.00 N ATOM 322 CA VAL 31 -6.217 2.038 -6.244 1.00 0.00 C ATOM 323 CB VAL 31 -6.397 0.721 -5.366 1.00 0.00 C ATOM 324 CG1 VAL 31 -5.281 0.513 -4.338 1.00 0.00 C ATOM 325 CG2 VAL 31 -7.791 0.662 -4.723 1.00 0.00 C ATOM 326 C VAL 31 -6.110 3.343 -5.378 1.00 0.00 C ATOM 327 O VAL 31 -5.010 3.641 -4.933 1.00 0.00 O ATOM 328 N ARG 32 -7.177 4.070 -5.037 1.00 0.00 N ATOM 330 CA ARG 32 -6.912 5.348 -4.336 1.00 0.00 C ATOM 331 CB ARG 32 -7.702 6.499 -4.965 1.00 0.00 C ATOM 332 CG ARG 32 -9.223 6.275 -5.154 1.00 0.00 C ATOM 333 CD ARG 32 -9.910 7.483 -5.789 1.00 0.00 C ATOM 334 NE ARG 32 -9.960 8.644 -4.895 1.00 0.00 N ATOM 336 CZ ARG 32 -10.503 9.824 -5.198 1.00 0.00 C ATOM 337 NH1 ARG 32 -10.486 10.801 -4.302 1.00 0.00 N ATOM 340 NH2 ARG 32 -11.063 10.040 -6.384 1.00 0.00 N ATOM 343 C ARG 32 -6.840 5.568 -2.819 1.00 0.00 C ATOM 344 O ARG 32 -7.709 5.139 -2.048 1.00 0.00 O ATOM 345 N CYS 33 -5.752 6.275 -2.459 1.00 0.00 N ATOM 347 CA CYS 33 -5.357 6.673 -1.100 1.00 0.00 C ATOM 348 CB CYS 33 -3.968 6.082 -0.770 1.00 0.00 C ATOM 349 SG CYS 33 -3.292 6.631 0.817 1.00 0.00 S ATOM 350 C CYS 33 -5.351 8.222 -0.967 1.00 0.00 C ATOM 351 O CYS 33 -6.419 8.826 -0.810 1.00 0.00 O ATOM 352 N SER 34 -4.156 8.841 -1.018 1.00 0.00 N ATOM 354 CA SER 34 -3.944 10.301 -0.887 1.00 0.00 C ATOM 355 CB SER 34 -3.911 10.691 0.606 1.00 0.00 C ATOM 356 OG SER 34 -3.915 12.098 0.785 1.00 0.00 O ATOM 358 C SER 34 -2.620 10.709 -1.582 1.00 0.00 C ATOM 359 O SER 34 -2.074 9.920 -2.361 1.00 0.00 O ATOM 360 N ASP 35 -2.127 11.936 -1.305 1.00 0.00 N ATOM 362 CA ASP 35 -0.872 12.549 -1.840 1.00 0.00 C ATOM 363 CB ASP 35 0.385 11.764 -1.361 1.00 0.00 C ATOM 364 CG ASP 35 1.529 12.680 -0.926 1.00 0.00 C ATOM 365 OD1 ASP 35 1.589 13.037 0.270 1.00 0.00 O ATOM 366 OD2 ASP 35 2.377 13.027 -1.777 1.00 0.00 O ATOM 367 C ASP 35 -0.851 12.735 -3.378 1.00 0.00 C ATOM 368 O ASP 35 -1.906 12.625 -4.016 1.00 0.00 O ATOM 369 N THR 36 0.331 13.054 -3.943 1.00 0.00 N ATOM 371 CA THR 36 0.570 13.231 -5.399 1.00 0.00 C ATOM 372 CB THR 36 2.092 13.589 -5.702 1.00 0.00 C ATOM 373 OG1 THR 36 2.364 13.450 -7.103 1.00 0.00 O ATOM 375 CG2 THR 36 3.090 12.743 -4.871 1.00 0.00 C ATOM 376 C THR 36 0.183 11.899 -6.062 1.00 0.00 C ATOM 377 O THR 36 0.739 10.867 -5.667 1.00 0.00 O ATOM 378 N LYS 37 -0.789 11.888 -6.998 1.00 0.00 N ATOM 380 CA LYS 37 -1.254 10.619 -7.627 1.00 0.00 C ATOM 381 CB LYS 37 -0.115 9.740 -8.230 1.00 0.00 C ATOM 382 CG LYS 37 0.701 10.383 -9.411 1.00 0.00 C ATOM 383 CD LYS 37 -0.046 10.671 -10.765 1.00 0.00 C ATOM 384 CE LYS 37 -0.223 9.454 -11.687 1.00 0.00 C ATOM 385 NZ LYS 37 -1.165 8.444 -11.124 1.00 0.00 N ATOM 389 C LYS 37 -2.039 9.855 -6.549 1.00 0.00 C ATOM 390 O LYS 37 -2.082 10.316 -5.398 1.00 0.00 O ATOM 391 N TYR 38 -2.724 8.764 -6.910 1.00 0.00 N ATOM 393 CA TYR 38 -3.477 7.987 -5.911 1.00 0.00 C ATOM 394 CB TYR 38 -4.363 6.938 -6.617 1.00 0.00 C ATOM 395 CG TYR 38 -5.079 7.380 -7.905 1.00 0.00 C ATOM 396 CD1 TYR 38 -4.553 7.048 -9.178 1.00 0.00 C ATOM 397 CE1 TYR 38 -5.219 7.428 -10.376 1.00 0.00 C ATOM 398 CD2 TYR 38 -6.296 8.107 -7.864 1.00 0.00 C ATOM 399 CE2 TYR 38 -6.969 8.491 -9.058 1.00 0.00 C ATOM 400 CZ TYR 38 -6.423 8.147 -10.304 1.00 0.00 C ATOM 401 OH TYR 38 -7.073 8.518 -11.459 1.00 0.00 O ATOM 403 C TYR 38 -2.219 7.266 -5.448 1.00 0.00 C ATOM 404 O TYR 38 -1.617 6.511 -6.207 1.00 0.00 O ATOM 405 N THR 39 -1.794 7.560 -4.211 1.00 0.00 N ATOM 407 CA THR 39 -0.527 7.033 -3.691 1.00 0.00 C ATOM 408 CB THR 39 0.627 8.019 -3.929 1.00 0.00 C ATOM 409 OG1 THR 39 0.190 9.353 -3.647 1.00 0.00 O ATOM 411 CG2 THR 39 1.150 7.921 -5.331 1.00 0.00 C ATOM 412 C THR 39 -0.337 6.468 -2.286 1.00 0.00 C ATOM 413 O THR 39 -1.114 6.729 -1.369 1.00 0.00 O ATOM 414 N LEU 40 0.774 5.727 -2.170 1.00 0.00 N ATOM 416 CA LEU 40 1.290 5.045 -0.984 1.00 0.00 C ATOM 417 CB LEU 40 1.859 3.664 -1.426 1.00 0.00 C ATOM 418 CG LEU 40 2.605 2.541 -0.637 1.00 0.00 C ATOM 419 CD1 LEU 40 4.099 2.833 -0.487 1.00 0.00 C ATOM 420 CD2 LEU 40 1.960 2.187 0.707 1.00 0.00 C ATOM 421 C LEU 40 2.397 5.944 -0.422 1.00 0.00 C ATOM 422 O LEU 40 3.008 5.630 0.611 1.00 0.00 O ATOM 423 N CYS 41 2.600 7.082 -1.093 1.00 0.00 N ATOM 425 CA CYS 41 3.637 8.049 -0.743 1.00 0.00 C ATOM 426 CB CYS 41 4.935 7.610 -1.411 1.00 0.00 C ATOM 427 SG CYS 41 6.415 8.532 -0.912 1.00 0.00 S ATOM 428 C CYS 41 3.286 9.486 -1.141 1.00 0.00 C ATOM 429 O CYS 41 2.736 9.694 -2.241 1.00 0.00 O ATOM 430 OXT CYS 41 3.585 10.400 -0.343 1.00 0.00 O TER END