####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 334), selected 41 , name T0955TS266_3 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS266_3.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 15 - 37 4.94 20.49 LCS_AVERAGE: 50.57 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 1 - 17 1.93 22.16 LCS_AVERAGE: 29.80 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 2 - 16 0.96 22.90 LCS_AVERAGE: 23.68 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 17 20 3 3 4 7 11 16 16 18 18 18 19 19 21 21 22 23 25 26 26 27 LCS_GDT Q 2 Q 2 15 17 20 5 8 13 15 15 16 16 18 18 18 19 19 21 21 22 23 25 26 26 27 LCS_GDT E 3 E 3 15 17 20 6 12 14 15 15 16 16 18 18 18 19 19 21 21 22 23 25 26 26 27 LCS_GDT T 4 T 4 15 17 20 6 12 14 15 15 16 16 18 18 18 19 19 21 21 22 23 25 26 26 27 LCS_GDT R 5 R 5 15 17 20 6 12 14 15 15 16 16 18 18 18 19 19 21 21 22 23 25 26 26 27 LCS_GDT K 6 K 6 15 17 20 8 12 14 15 15 16 16 18 18 18 19 19 21 21 22 23 25 26 26 27 LCS_GDT K 7 K 7 15 17 20 6 12 14 15 15 16 16 18 18 18 19 19 21 21 22 23 25 26 26 27 LCS_GDT C 8 C 8 15 17 20 8 12 14 15 15 16 16 18 18 18 19 19 21 21 22 23 25 26 26 27 LCS_GDT T 9 T 9 15 17 20 8 12 14 15 15 16 16 18 18 18 19 19 21 21 22 23 25 26 26 27 LCS_GDT E 10 E 10 15 17 20 8 12 14 15 15 16 16 18 18 18 19 19 21 21 22 23 25 26 26 27 LCS_GDT M 11 M 11 15 17 20 8 12 14 15 15 16 16 18 18 18 19 19 21 21 22 23 25 26 26 27 LCS_GDT K 12 K 12 15 17 20 8 12 14 15 15 16 16 18 18 18 19 19 21 21 22 23 25 26 26 27 LCS_GDT K 13 K 13 15 17 20 8 12 14 15 15 16 16 18 18 18 18 19 20 20 21 23 25 26 26 27 LCS_GDT K 14 K 14 15 17 21 8 12 14 15 15 16 16 18 18 18 19 19 21 21 22 23 25 26 26 27 LCS_GDT F 15 F 15 15 17 23 5 12 14 15 15 16 16 18 18 18 19 19 21 21 22 23 25 26 26 27 LCS_GDT K 16 K 16 15 17 23 4 7 14 15 15 16 16 18 18 18 18 19 21 21 22 23 25 26 26 27 LCS_GDT N 17 N 17 5 17 23 4 5 6 8 9 12 16 18 18 18 19 20 21 21 22 23 25 26 26 27 LCS_GDT C 18 C 18 8 10 23 4 6 8 9 9 10 14 18 18 18 19 20 21 21 22 23 25 26 26 27 LCS_GDT E 19 E 19 8 10 23 3 6 8 9 9 10 12 15 16 18 19 20 20 21 22 23 25 26 26 27 LCS_GDT V 20 V 20 8 10 23 3 6 8 9 9 10 12 15 16 18 19 20 20 21 22 23 24 24 24 25 LCS_GDT R 21 R 21 8 10 23 3 6 8 9 9 10 12 15 16 18 19 20 20 21 22 23 24 24 24 25 LCS_GDT C 22 C 22 8 10 23 3 6 8 9 9 10 12 15 16 18 19 20 20 21 22 23 24 24 24 25 LCS_GDT D 23 D 23 8 10 23 3 6 8 9 9 10 12 15 16 18 19 20 20 21 22 23 24 24 24 25 LCS_GDT E 24 E 24 8 10 23 3 6 8 9 9 10 12 15 16 18 19 20 20 21 22 23 24 24 24 25 LCS_GDT S 25 S 25 8 10 23 3 6 8 9 9 10 12 15 16 18 19 20 20 21 22 23 24 24 24 25 LCS_GDT N 26 N 26 7 10 23 3 5 8 9 9 10 10 11 14 16 19 20 20 21 22 23 24 24 24 25 LCS_GDT H 27 H 27 4 10 23 3 5 5 5 8 9 12 15 16 18 19 20 20 21 22 23 24 24 24 25 LCS_GDT C 28 C 28 7 8 23 5 7 7 7 8 9 11 15 16 18 19 20 20 21 22 23 24 24 24 25 LCS_GDT V 29 V 29 7 8 23 5 7 7 7 8 8 9 10 14 18 19 20 20 20 22 22 24 24 24 25 LCS_GDT E 30 E 30 7 8 23 5 7 7 7 8 9 12 15 16 18 19 20 20 21 22 23 24 24 24 25 LCS_GDT V 31 V 31 7 8 23 5 7 7 7 8 8 11 13 16 18 19 20 20 21 22 23 24 24 24 25 LCS_GDT R 32 R 32 7 8 23 5 7 7 7 8 9 12 15 16 18 19 20 20 21 22 23 24 24 26 27 LCS_GDT C 33 C 33 7 8 23 3 7 7 7 8 8 10 14 16 18 19 20 20 21 22 23 25 26 26 27 LCS_GDT S 34 S 34 7 8 23 3 7 7 8 8 10 12 15 16 18 19 20 21 21 22 23 25 26 26 27 LCS_GDT D 35 D 35 5 8 23 3 3 5 8 8 9 12 15 16 18 19 20 21 21 22 23 25 26 26 27 LCS_GDT T 36 T 36 6 8 23 4 7 7 8 8 10 11 11 15 18 19 20 21 21 22 23 25 26 26 27 LCS_GDT K 37 K 37 6 8 23 5 7 7 8 8 10 11 11 13 15 17 18 21 21 22 23 25 26 26 27 LCS_GDT Y 38 Y 38 6 8 10 5 7 7 8 8 10 11 11 13 15 17 18 19 21 22 23 25 26 26 27 LCS_GDT T 39 T 39 6 8 10 5 7 7 8 8 10 11 11 13 15 17 18 19 21 21 23 25 26 26 27 LCS_GDT L 40 L 40 6 8 10 5 7 7 8 8 10 11 11 13 15 17 18 19 20 21 23 24 24 26 27 LCS_GDT C 41 C 41 6 8 10 5 7 7 8 8 10 11 11 13 15 17 18 19 20 21 23 24 24 26 27 LCS_AVERAGE LCS_A: 34.68 ( 23.68 29.80 50.57 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 12 14 15 15 16 16 18 18 18 19 20 21 21 22 23 25 26 26 27 GDT PERCENT_AT 19.51 29.27 34.15 36.59 36.59 39.02 39.02 43.90 43.90 43.90 46.34 48.78 51.22 51.22 53.66 56.10 60.98 63.41 63.41 65.85 GDT RMS_LOCAL 0.15 0.61 0.84 0.96 0.96 1.31 1.31 2.40 2.40 2.40 3.61 3.81 4.40 4.40 4.71 5.11 5.42 5.60 5.60 5.92 GDT RMS_ALL_AT 23.19 23.28 22.82 22.90 22.90 22.71 22.71 21.72 21.72 21.72 21.95 21.74 19.95 19.95 19.78 19.76 19.28 18.98 18.98 18.71 # Checking swapping # possible swapping detected: E 3 E 3 # possible swapping detected: F 15 F 15 # possible swapping detected: E 19 E 19 # possible swapping detected: D 23 D 23 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 2.603 0 0.228 0.692 4.346 22.273 26.364 3.338 LGA Q 2 Q 2 2.706 0 0.224 0.748 6.732 41.818 21.212 6.732 LGA E 3 E 3 1.243 0 0.096 0.883 3.271 65.909 51.515 2.841 LGA T 4 T 4 1.601 0 0.046 1.018 3.860 61.818 48.052 3.860 LGA R 5 R 5 1.101 0 0.053 1.646 8.964 65.455 34.876 8.964 LGA K 6 K 6 0.953 0 0.036 0.946 5.337 73.636 51.717 5.337 LGA K 7 K 7 1.041 0 0.083 0.811 3.914 69.545 50.303 3.914 LGA C 8 C 8 1.669 0 0.030 0.781 4.725 54.545 45.152 4.725 LGA T 9 T 9 1.625 0 0.035 1.083 3.057 50.909 48.312 1.524 LGA E 10 E 10 1.001 0 0.040 0.670 2.782 65.455 63.030 2.782 LGA M 11 M 11 1.046 0 0.077 0.914 4.264 65.455 47.727 4.264 LGA K 12 K 12 2.321 0 0.069 0.995 7.790 38.636 26.869 7.790 LGA K 13 K 13 2.640 0 0.041 0.606 3.026 27.727 36.566 1.155 LGA K 14 K 14 2.129 0 0.064 0.640 3.413 38.182 32.929 3.094 LGA F 15 F 15 2.064 0 0.477 1.364 10.358 41.364 17.521 10.358 LGA K 16 K 16 1.251 0 0.081 1.021 7.241 62.273 33.131 7.241 LGA N 17 N 17 4.280 0 0.060 0.295 7.447 10.909 5.455 7.447 LGA C 18 C 18 5.837 0 0.079 0.947 7.330 1.364 3.939 3.487 LGA E 19 E 19 11.456 0 0.294 1.084 17.988 0.000 0.000 17.543 LGA V 20 V 20 16.120 0 0.175 1.164 18.206 0.000 0.000 16.380 LGA R 21 R 21 22.584 0 0.065 1.208 32.164 0.000 0.000 29.948 LGA C 22 C 22 28.178 0 0.062 0.863 30.440 0.000 0.000 28.790 LGA D 23 D 23 35.081 0 0.126 0.592 37.398 0.000 0.000 34.184 LGA E 24 E 24 41.655 0 0.678 1.249 45.127 0.000 0.000 40.876 LGA S 25 S 25 46.716 0 0.566 0.731 48.205 0.000 0.000 48.205 LGA N 26 N 26 45.955 0 0.510 0.657 46.366 0.000 0.000 45.643 LGA H 27 H 27 42.525 0 0.052 1.145 45.106 0.000 0.000 44.507 LGA C 28 C 28 41.612 0 0.580 0.587 45.711 0.000 0.000 45.711 LGA V 29 V 29 34.923 0 0.162 0.983 37.322 0.000 0.000 32.707 LGA E 30 E 30 29.070 0 0.036 0.891 32.200 0.000 0.000 30.869 LGA V 31 V 31 22.417 0 0.038 0.077 24.764 0.000 0.000 19.792 LGA R 32 R 32 17.685 0 0.235 0.931 23.545 0.000 0.000 23.545 LGA C 33 C 33 11.294 0 0.541 0.963 13.594 0.000 0.000 10.736 LGA S 34 S 34 12.429 0 0.512 0.976 15.277 0.000 0.000 12.875 LGA D 35 D 35 17.396 0 0.588 1.035 20.571 0.000 0.000 16.975 LGA T 36 T 36 20.282 0 0.196 1.064 22.698 0.000 0.000 22.698 LGA K 37 K 37 21.522 0 0.107 1.206 30.971 0.000 0.000 30.971 LGA Y 38 Y 38 22.537 0 0.061 0.341 22.537 0.000 0.000 12.068 LGA T 39 T 39 24.513 0 0.223 1.001 27.906 0.000 0.000 27.906 LGA L 40 L 40 22.913 0 0.243 0.315 24.870 0.000 0.000 18.478 LGA C 41 C 41 27.763 1 0.070 0.857 31.999 0.000 0.000 31.999 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 334 99.70 41 41 SUMMARY(RMSD_GDC): 13.923 13.632 14.138 20.909 15.724 6.208 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 18 2.40 41.463 38.516 0.719 LGA_LOCAL RMSD: 2.404 Number of atoms: 18 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 21.720 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 13.923 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.963334 * X + 0.164715 * Y + 0.211794 * Z + -14.642952 Y_new = -0.247132 * X + 0.237381 * Y + 0.939455 * Z + 41.463951 Z_new = 0.104467 * X + -0.957350 * Y + 0.269383 * Z + 32.503742 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.251123 -0.104658 -1.296505 [DEG: -14.3883 -5.9965 -74.2842 ] ZXZ: 2.919857 1.298044 3.032902 [DEG: 167.2955 74.3724 173.7725 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS266_3 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS266_3.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 18 2.40 38.516 13.92 REMARK ---------------------------------------------------------- MOLECULE T0955TS266_3 PFRMAT TS TARGET T0955 MODEL 3 PARENT 1PUG_A ATOM 1 N SER 1 -2.266 -13.094 0.247 1.00 0.00 ATOM 2 CA SER 1 -1.449 -13.802 1.254 1.00 0.00 ATOM 3 C SER 1 -0.647 -12.799 2.017 1.00 0.00 ATOM 4 O SER 1 -0.893 -11.597 1.925 1.00 0.00 ATOM 5 CB SER 1 -0.507 -14.801 0.554 1.00 0.00 ATOM 6 OG SER 1 0.203 -15.583 1.503 1.00 0.00 ATOM 7 N GLN 2 0.327 -13.272 2.810 1.00 0.00 ATOM 8 CA GLN 2 1.135 -12.382 3.584 1.00 0.00 ATOM 9 C GLN 2 1.941 -11.557 2.638 1.00 0.00 ATOM 10 O GLN 2 2.198 -10.383 2.891 1.00 0.00 ATOM 11 CB GLN 2 2.102 -13.103 4.538 1.00 0.00 ATOM 12 CG GLN 2 2.945 -12.140 5.381 1.00 0.00 ATOM 13 CD GLN 2 3.793 -12.950 6.352 1.00 0.00 ATOM 14 OE1 GLN 2 3.872 -14.175 6.267 1.00 0.00 ATOM 15 NE2 GLN 2 4.446 -12.243 7.315 1.00 0.00 ATOM 16 N GLU 3 2.354 -12.158 1.510 1.00 0.00 ATOM 17 CA GLU 3 3.192 -11.465 0.577 1.00 0.00 ATOM 18 C GLU 3 2.483 -10.243 0.083 1.00 0.00 ATOM 19 O GLU 3 3.055 -9.154 0.055 1.00 0.00 ATOM 20 CB GLU 3 3.514 -12.337 -0.648 1.00 0.00 ATOM 21 CG GLU 3 2.260 -12.754 -1.425 1.00 0.00 ATOM 22 CD GLU 3 2.647 -13.754 -2.504 1.00 0.00 ATOM 23 OE1 GLU 3 3.673 -14.462 -2.321 0.50 0.50 ATOM 24 OE2 GLU 3 1.910 -13.833 -3.523 1.00 0.00 ATOM 25 N THR 4 1.205 -10.386 -0.311 1.00 0.00 ATOM 26 CA THR 4 0.491 -9.268 -0.849 1.00 0.00 ATOM 27 C THR 4 0.332 -8.245 0.222 1.00 0.00 ATOM 28 O THR 4 0.551 -7.054 0.002 1.00 0.00 ATOM 29 CB THR 4 -0.884 -9.640 -1.328 1.00 0.00 ATOM 30 OG1 THR 4 -1.675 -10.092 -0.240 1.00 0.00 ATOM 31 CG2 THR 4 -0.756 -10.749 -2.384 1.00 0.00 ATOM 32 N ARG 5 -0.036 -8.704 1.428 1.00 0.00 ATOM 33 CA ARG 5 -0.313 -7.814 2.515 1.00 0.00 ATOM 34 C ARG 5 0.935 -7.075 2.873 1.00 0.00 ATOM 35 O ARG 5 0.895 -5.877 3.144 1.00 0.00 ATOM 36 CB ARG 5 -0.800 -8.558 3.772 1.00 0.00 ATOM 37 CG ARG 5 -1.408 -7.644 4.839 1.00 0.00 ATOM 38 CD ARG 5 -2.727 -6.998 4.405 1.00 0.00 ATOM 39 NE ARG 5 -3.342 -6.363 5.603 1.00 0.00 ATOM 40 CZ ARG 5 -3.005 -5.090 5.963 1.00 0.00 ATOM 41 NH1 ARG 5 -2.086 -4.389 5.235 1.00 0.00 ATOM 42 NH2 ARG 5 -3.593 -4.512 7.049 1.00 0.00 ATOM 43 N LYS 6 2.084 -7.773 2.859 1.00 0.00 ATOM 44 CA LYS 6 3.324 -7.186 3.276 1.00 0.00 ATOM 45 C LYS 6 3.634 -6.025 2.391 1.00 0.00 ATOM 46 O LYS 6 4.016 -4.960 2.869 1.00 0.00 ATOM 47 CB LYS 6 4.505 -8.168 3.163 1.00 0.00 ATOM 48 CG LYS 6 5.782 -7.710 3.874 1.00 0.00 ATOM 49 CD LYS 6 5.683 -7.763 5.400 1.00 0.00 ATOM 50 CE LYS 6 6.991 -7.400 6.106 1.00 0.00 ATOM 51 NZ LYS 6 6.808 -7.450 7.575 1.00 0.00 ATOM 52 N LYS 7 3.465 -6.200 1.069 1.00 0.00 ATOM 53 CA LYS 7 3.793 -5.150 0.151 1.00 0.00 ATOM 54 C LYS 7 2.903 -3.975 0.402 1.00 0.00 ATOM 55 O LYS 7 3.365 -2.838 0.496 1.00 0.00 ATOM 56 CB LYS 7 3.581 -5.568 -1.314 1.00 0.00 ATOM 57 CG LYS 7 4.499 -6.708 -1.764 1.00 0.00 ATOM 58 CD LYS 7 4.071 -7.353 -3.084 1.00 0.00 ATOM 59 CE LYS 7 5.007 -8.468 -3.555 1.00 0.00 ATOM 60 NZ LYS 7 4.911 -9.634 -2.647 1.00 0.00 ATOM 61 N CYS 8 1.588 -4.232 0.532 1.00 0.00 ATOM 62 CA CYS 8 0.631 -3.178 0.693 1.00 0.00 ATOM 63 C CYS 8 0.867 -2.458 1.980 1.00 0.00 ATOM 64 O CYS 8 0.840 -1.229 2.025 1.00 0.00 ATOM 65 CB CYS 8 -0.818 -3.694 0.712 1.00 0.00 ATOM 66 SG CYS 8 -1.319 -4.406 -0.885 1.00 0.00 ATOM 67 N THR 9 1.119 -3.211 3.064 1.00 0.00 ATOM 68 CA THR 9 1.262 -2.619 4.363 1.00 0.00 ATOM 69 C THR 9 2.450 -1.709 4.399 1.00 0.00 ATOM 70 O THR 9 2.384 -0.621 4.968 1.00 0.00 ATOM 71 CB THR 9 1.418 -3.640 5.455 1.00 0.00 ATOM 72 OG1 THR 9 1.403 -3.003 6.723 1.00 0.00 ATOM 73 CG2 THR 9 2.741 -4.395 5.250 1.00 0.00 ATOM 74 N GLU 10 3.573 -2.125 3.786 1.00 0.00 ATOM 75 CA GLU 10 4.764 -1.331 3.845 1.00 0.00 ATOM 76 C GLU 10 4.520 -0.024 3.160 1.00 0.00 ATOM 77 O GLU 10 4.928 1.026 3.657 1.00 0.00 ATOM 78 CB GLU 10 5.969 -2.013 3.168 1.00 0.00 ATOM 79 CG GLU 10 7.302 -1.309 3.433 1.00 0.00 ATOM 80 CD GLU 10 8.413 -2.113 2.768 1.00 0.00 ATOM 81 OE1 GLU 10 8.088 -3.049 1.990 1.00 0.00 ATOM 82 OE2 GLU 10 9.605 -1.800 3.033 1.00 0.00 ATOM 83 N MET 11 3.831 -0.054 2.004 1.00 0.00 ATOM 84 CA MET 11 3.592 1.145 1.256 1.00 0.00 ATOM 85 C MET 11 2.730 2.054 2.067 1.00 0.00 ATOM 86 O MET 11 2.947 3.263 2.097 1.00 0.00 ATOM 87 CB MET 11 2.874 0.893 -0.081 1.00 0.00 ATOM 88 CG MET 11 2.705 2.160 -0.927 1.00 0.00 ATOM 89 SD MET 11 2.063 1.865 -2.602 1.00 0.00 ATOM 90 CE MET 11 3.604 1.133 -3.227 1.00 0.00 ATOM 91 N LYS 12 1.736 1.478 2.766 1.00 0.00 ATOM 92 CA LYS 12 0.812 2.258 3.534 1.00 0.00 ATOM 93 C LYS 12 1.578 3.002 4.580 1.00 0.00 ATOM 94 O LYS 12 1.308 4.174 4.836 1.00 0.00 ATOM 95 CB LYS 12 -0.232 1.391 4.256 1.00 0.00 ATOM 96 CG LYS 12 -1.186 0.670 3.305 1.00 0.00 ATOM 97 CD LYS 12 -2.011 1.622 2.435 1.00 0.00 ATOM 98 CE LYS 12 -2.981 0.911 1.494 1.00 0.00 ATOM 99 NZ LYS 12 -3.750 1.909 0.718 1.00 0.00 ATOM 100 N LYS 13 2.566 2.340 5.207 1.00 0.00 ATOM 101 CA LYS 13 3.314 2.985 6.243 1.00 0.00 ATOM 102 C LYS 13 4.034 4.160 5.670 1.00 0.00 ATOM 103 O LYS 13 4.061 5.229 6.277 1.00 0.00 ATOM 104 CB LYS 13 4.377 2.081 6.894 1.00 0.00 ATOM 105 CG LYS 13 3.792 0.980 7.774 1.00 0.00 ATOM 106 CD LYS 13 4.809 -0.093 8.169 1.00 0.00 ATOM 107 CE LYS 13 4.228 -1.177 9.077 1.00 0.00 ATOM 108 NZ LYS 13 5.264 -2.183 9.400 1.00 0.00 ATOM 109 N LYS 14 4.632 4.001 4.475 1.00 0.00 ATOM 110 CA LYS 14 5.387 5.078 3.904 1.00 0.00 ATOM 111 C LYS 14 4.482 6.237 3.625 1.00 0.00 ATOM 112 O LYS 14 4.839 7.384 3.893 1.00 0.00 ATOM 113 CB LYS 14 6.094 4.703 2.588 1.00 0.00 ATOM 114 CG LYS 14 7.334 3.822 2.782 1.00 0.00 ATOM 115 CD LYS 14 8.446 4.508 3.582 1.00 0.00 ATOM 116 CE LYS 14 9.724 3.673 3.719 1.00 0.00 ATOM 117 NZ LYS 14 9.439 2.424 4.460 1.00 0.00 ATOM 118 N PHE 15 3.276 5.969 3.091 1.00 0.00 ATOM 119 CA PHE 15 2.364 7.023 2.742 1.00 0.00 ATOM 120 C PHE 15 1.974 7.773 3.969 1.00 0.00 ATOM 121 O PHE 15 2.024 9.003 3.999 1.00 0.00 ATOM 122 CB PHE 15 1.073 6.501 2.088 1.00 0.00 ATOM 123 CG PHE 15 0.156 7.659 1.891 1.00 0.00 ATOM 124 CD1 PHE 15 0.340 8.536 0.847 1.00 0.00 ATOM 125 CD2 PHE 15 -0.893 7.856 2.753 1.00 0.00 ATOM 126 CE1 PHE 15 -0.514 9.601 0.673 1.00 0.00 ATOM 127 CE2 PHE 15 -1.749 8.918 2.584 1.00 0.00 ATOM 128 CZ PHE 15 -1.562 9.794 1.542 1.00 0.00 ATOM 129 N LYS 16 1.615 7.044 5.038 1.00 0.00 ATOM 130 CA LYS 16 1.159 7.677 6.237 1.00 0.00 ATOM 131 C LYS 16 2.254 8.538 6.782 1.00 0.00 ATOM 132 O LYS 16 1.993 9.559 7.416 1.00 0.00 ATOM 133 CB LYS 16 0.665 6.678 7.303 1.00 0.00 ATOM 134 CG LYS 16 1.615 5.531 7.639 1.00 0.00 ATOM 135 CD LYS 16 1.083 4.670 8.786 1.00 0.00 ATOM 136 CE LYS 16 1.812 3.338 8.955 1.00 0.00 ATOM 137 NZ LYS 16 1.080 2.491 9.923 1.00 0.00 ATOM 138 N ASN 17 3.514 8.145 6.538 1.00 0.00 ATOM 139 CA ASN 17 4.655 8.864 7.026 1.00 0.00 ATOM 140 C ASN 17 4.693 10.244 6.450 1.00 0.00 ATOM 141 O ASN 17 5.103 11.176 7.139 1.00 0.00 ATOM 142 CB ASN 17 5.999 8.197 6.674 1.00 0.00 ATOM 143 CG ASN 17 6.202 6.993 7.587 1.00 0.00 ATOM 144 OD1 ASN 17 6.051 7.089 8.805 1.00 0.00 ATOM 145 ND2 ASN 17 6.558 5.826 6.985 1.00 0.00 ATOM 146 N CYS 18 4.280 10.430 5.180 1.00 0.00 ATOM 147 CA CYS 18 4.399 11.741 4.604 1.00 0.00 ATOM 148 C CYS 18 3.577 12.689 5.410 1.00 0.00 ATOM 149 O CYS 18 2.449 12.389 5.796 1.00 0.00 ATOM 150 CB CYS 18 3.920 11.841 3.145 1.00 0.00 ATOM 151 SG CYS 18 2.118 11.685 2.987 1.00 0.00 ATOM 152 N GLU 19 4.147 13.875 5.692 1.00 0.00 ATOM 153 CA GLU 19 3.471 14.842 6.497 1.00 0.00 ATOM 154 C GLU 19 3.728 16.177 5.886 1.00 0.00 ATOM 155 O GLU 19 4.812 16.431 5.361 1.00 0.00 ATOM 156 CB GLU 19 4.029 14.879 7.925 1.00 0.00 ATOM 157 CG GLU 19 3.810 13.559 8.662 1.00 0.00 ATOM 158 CD GLU 19 4.848 13.434 9.770 1.00 0.00 ATOM 159 OE1 GLU 19 6.022 13.822 9.530 1.00 0.00 ATOM 160 OE2 GLU 19 4.478 12.939 10.868 1.00 0.00 ATOM 161 N VAL 20 2.715 17.062 5.924 1.00 0.00 ATOM 162 CA VAL 20 2.907 18.381 5.409 1.00 0.00 ATOM 163 C VAL 20 2.332 19.308 6.423 1.00 0.00 ATOM 164 O VAL 20 1.359 18.975 7.099 1.00 0.00 ATOM 165 CB VAL 20 2.185 18.653 4.121 1.00 0.00 ATOM 166 CG1 VAL 20 2.714 17.697 3.037 1.00 0.00 ATOM 167 CG2 VAL 20 0.675 18.535 4.376 1.00 0.00 ATOM 168 N ARG 21 2.946 20.493 6.577 1.00 0.00 ATOM 169 CA ARG 21 2.424 21.444 7.507 1.00 0.00 ATOM 170 C ARG 21 2.186 22.704 6.753 1.00 0.00 ATOM 171 O ARG 21 3.043 23.157 5.997 1.00 0.00 ATOM 172 CB ARG 21 3.385 21.782 8.660 1.00 0.00 ATOM 173 CG ARG 21 2.809 22.802 9.646 1.00 0.00 ATOM 174 CD ARG 21 3.789 23.228 10.741 1.00 0.00 ATOM 175 NE ARG 21 4.097 22.017 11.553 1.00 0.00 ATOM 176 CZ ARG 21 5.013 22.087 12.563 1.00 0.00 ATOM 177 NH1 ARG 21 5.628 23.272 12.850 1.00 0.00 ATOM 178 NH2 ARG 21 5.317 20.967 13.280 1.00 0.00 ATOM 179 N CYS 22 0.992 23.300 6.932 1.00 0.00 ATOM 180 CA CYS 22 0.721 24.540 6.268 1.00 0.00 ATOM 181 C CYS 22 0.792 25.596 7.317 1.00 0.00 ATOM 182 O CYS 22 0.535 25.330 8.492 1.00 0.00 ATOM 183 CB CYS 22 -0.671 24.617 5.623 1.00 0.00 ATOM 184 SG CYS 22 -0.962 26.210 4.798 1.00 0.00 ATOM 185 N ASP 23 1.184 26.822 6.925 1.00 0.00 ATOM 186 CA ASP 23 1.307 27.860 7.902 1.00 0.00 ATOM 187 C ASP 23 0.589 29.075 7.415 1.00 0.00 ATOM 188 O ASP 23 0.546 29.348 6.217 1.00 0.00 ATOM 189 CB ASP 23 2.766 28.275 8.153 1.00 0.00 ATOM 190 CG ASP 23 3.477 27.076 8.757 1.00 0.00 ATOM 191 OD1 ASP 23 2.798 26.313 9.492 1.00 0.00 ATOM 192 OD2 ASP 23 4.697 26.899 8.493 1.00 0.00 ATOM 193 N GLU 24 -0.024 29.828 8.350 1.00 0.00 ATOM 194 CA GLU 24 -0.649 31.073 8.011 1.00 0.00 ATOM 195 C GLU 24 0.115 32.120 8.745 1.00 0.00 ATOM 196 O GLU 24 0.585 31.889 9.859 1.00 0.00 ATOM 197 CB GLU 24 -2.129 31.197 8.422 1.00 0.00 ATOM 198 CG GLU 24 -3.111 30.527 7.456 1.00 0.00 ATOM 199 CD GLU 24 -3.238 29.048 7.795 1.00 0.00 ATOM 200 OE1 GLU 24 -2.189 28.388 8.017 1.00 0.00 ATOM 201 OE2 GLU 24 -4.398 28.558 7.841 1.00 0.00 ATOM 202 N SER 25 0.296 33.303 8.121 1.00 0.00 ATOM 203 CA SER 25 1.102 34.301 8.753 1.00 0.00 ATOM 204 C SER 25 2.454 33.679 8.874 1.00 0.00 ATOM 205 O SER 25 2.741 32.674 8.231 1.00 0.00 ATOM 206 CB SER 25 0.604 34.745 10.138 1.00 0.00 ATOM 207 OG SER 25 1.420 35.798 10.626 1.00 0.00 ATOM 208 N ASN 26 3.363 34.260 9.667 1.00 0.00 ATOM 209 CA ASN 26 4.607 33.567 9.737 1.00 0.00 ATOM 210 C ASN 26 4.510 32.564 10.838 1.00 0.00 ATOM 211 O ASN 26 4.908 32.799 11.977 1.00 0.00 ATOM 212 CB ASN 26 5.828 34.490 9.948 1.00 0.00 ATOM 213 CG ASN 26 5.655 35.318 11.216 1.00 0.00 ATOM 214 OD1 ASN 26 4.537 35.563 11.665 1.00 0.00 ATOM 215 ND2 ASN 26 6.795 35.769 11.807 1.00 0.00 ATOM 216 N HIS 27 3.962 31.388 10.494 1.00 0.00 ATOM 217 CA HIS 27 3.852 30.300 11.411 1.00 0.00 ATOM 218 C HIS 27 3.050 30.715 12.605 1.00 0.00 ATOM 219 O HIS 27 3.247 30.175 13.692 1.00 0.00 ATOM 220 CB HIS 27 5.224 29.814 11.910 1.00 0.00 ATOM 221 CG HIS 27 6.124 29.331 10.810 1.00 0.00 ATOM 222 ND1 HIS 27 6.870 30.164 10.007 1.00 0.00 ATOM 223 CD2 HIS 27 6.393 28.068 10.385 1.00 0.00 ATOM 224 CE1 HIS 27 7.546 29.370 9.141 1.00 0.00 ATOM 225 NE2 HIS 27 7.290 28.089 9.331 1.00 0.00 ATOM 226 N CYS 28 2.108 31.668 12.455 1.00 0.00 ATOM 227 CA CYS 28 1.327 31.990 13.615 1.00 0.00 ATOM 228 C CYS 28 0.578 30.752 13.958 1.00 0.00 ATOM 229 O CYS 28 0.535 30.332 15.114 1.00 0.00 ATOM 230 CB CYS 28 0.301 33.114 13.387 1.00 0.00 ATOM 231 SG CYS 28 1.064 34.759 13.312 1.00 0.00 ATOM 232 N VAL 29 -0.024 30.124 12.937 1.00 0.00 ATOM 233 CA VAL 29 -0.707 28.896 13.179 1.00 0.00 ATOM 234 C VAL 29 -0.209 27.949 12.145 1.00 0.00 ATOM 235 O VAL 29 0.061 28.343 11.011 1.00 0.00 ATOM 236 CB VAL 29 -2.194 28.985 13.011 1.00 0.00 ATOM 237 CG1 VAL 29 -2.507 29.219 11.523 1.00 0.00 ATOM 238 CG2 VAL 29 -2.821 27.704 13.584 1.00 0.00 ATOM 239 N GLU 30 -0.040 26.669 12.521 1.00 0.00 ATOM 240 CA GLU 30 0.402 25.712 11.557 1.00 0.00 ATOM 241 C GLU 30 -0.537 24.555 11.606 1.00 0.00 ATOM 242 O GLU 30 -1.053 24.197 12.664 1.00 0.00 ATOM 243 CB GLU 30 1.830 25.176 11.793 1.00 0.00 ATOM 244 CG GLU 30 2.093 24.612 13.190 1.00 0.00 ATOM 245 CD GLU 30 2.615 25.758 14.044 1.00 0.00 ATOM 246 OE1 GLU 30 3.047 26.785 13.455 1.00 0.00 ATOM 247 OE2 GLU 30 2.587 25.620 15.296 1.00 0.00 ATOM 248 N VAL 31 -0.797 23.956 10.431 1.00 0.00 ATOM 249 CA VAL 31 -1.659 22.817 10.357 1.00 0.00 ATOM 250 C VAL 31 -0.781 21.673 9.985 1.00 0.00 ATOM 251 O VAL 31 0.103 21.809 9.142 1.00 0.00 ATOM 252 CB VAL 31 -2.702 22.921 9.287 1.00 0.00 ATOM 253 CG1 VAL 31 -3.495 21.601 9.236 1.00 0.00 ATOM 254 CG2 VAL 31 -3.562 24.163 9.571 1.00 0.00 ATOM 255 N ARG 32 -0.989 20.512 10.628 1.00 0.00 ATOM 256 CA ARG 32 -0.156 19.401 10.290 1.00 0.00 ATOM 257 C ARG 32 -1.016 18.303 9.771 1.00 0.00 ATOM 258 O ARG 32 -2.096 18.032 10.294 1.00 0.00 ATOM 259 CB ARG 32 0.633 18.814 11.473 1.00 0.00 ATOM 260 CG ARG 32 1.500 17.622 11.066 1.00 0.00 ATOM 261 CD ARG 32 0.863 16.266 11.375 1.00 0.00 ATOM 262 NE ARG 32 1.140 15.959 12.808 1.00 0.00 ATOM 263 CZ ARG 32 2.259 15.246 13.128 1.00 0.00 ATOM 264 NH1 ARG 32 3.102 14.835 12.136 1.00 0.00 ATOM 265 NH2 ARG 32 2.532 14.948 14.434 1.00 0.00 ATOM 266 N CYS 33 -0.543 17.651 8.695 1.00 0.00 ATOM 267 CA CYS 33 -1.268 16.545 8.160 1.00 0.00 ATOM 268 C CYS 33 -0.325 15.386 8.180 1.00 0.00 ATOM 269 O CYS 33 0.794 15.478 7.678 1.00 0.00 ATOM 270 CB CYS 33 -1.694 16.761 6.702 1.00 0.00 ATOM 271 SG CYS 33 -2.618 15.351 6.032 1.00 0.00 ATOM 272 N SER 34 -0.756 14.269 8.798 1.00 0.00 ATOM 273 CA SER 34 0.035 13.076 8.860 1.00 0.00 ATOM 274 C SER 34 -0.897 12.000 9.305 1.00 0.00 ATOM 275 O SER 34 -2.041 12.282 9.647 1.00 0.00 ATOM 276 CB SER 34 1.163 13.142 9.901 1.00 0.00 ATOM 277 OG SER 34 0.613 13.286 11.202 1.00 0.00 ATOM 278 N ASP 35 -0.446 10.729 9.277 1.00 0.00 ATOM 279 CA ASP 35 -1.277 9.652 9.734 1.00 0.00 ATOM 280 C ASP 35 -0.900 9.334 11.143 1.00 0.00 ATOM 281 O ASP 35 -0.289 10.146 11.839 1.00 0.00 ATOM 282 CB ASP 35 -1.140 8.359 8.921 1.00 0.00 ATOM 283 CG ASP 35 -1.782 8.594 7.562 1.00 0.00 ATOM 284 OD1 ASP 35 -1.778 9.769 7.102 1.00 0.00 ATOM 285 OD2 ASP 35 -2.276 7.603 6.962 1.00 0.00 ATOM 286 N THR 36 -1.287 8.128 11.604 1.00 0.00 ATOM 287 CA THR 36 -0.970 7.705 12.934 1.00 0.00 ATOM 288 C THR 36 0.490 7.399 12.960 1.00 0.00 ATOM 289 O THR 36 1.119 7.243 11.914 1.00 0.00 ATOM 290 CB THR 36 -1.704 6.467 13.364 1.00 0.00 ATOM 291 OG1 THR 36 -1.509 6.236 14.751 1.00 0.00 ATOM 292 CG2 THR 36 -1.177 5.274 12.549 1.00 0.00 ATOM 293 N LYS 37 1.076 7.325 14.170 1.00 0.00 ATOM 294 CA LYS 37 2.487 7.102 14.261 1.00 0.00 ATOM 295 C LYS 37 2.729 5.717 14.764 1.00 0.00 ATOM 296 O LYS 37 1.984 5.200 15.595 1.00 0.00 ATOM 297 CB LYS 37 3.189 8.075 15.222 1.00 0.00 ATOM 298 CG LYS 37 2.714 7.941 16.669 1.00 0.00 ATOM 299 CD LYS 37 3.499 8.808 17.654 1.00 0.00 ATOM 300 CE LYS 37 4.973 8.421 17.785 1.00 0.00 ATOM 301 NZ LYS 37 5.645 9.314 18.756 1.00 0.00 ATOM 302 N TYR 38 3.788 5.077 14.230 1.00 0.00 ATOM 303 CA TYR 38 4.157 3.752 14.634 1.00 0.00 ATOM 304 C TYR 38 5.630 3.787 14.882 1.00 0.00 ATOM 305 O TYR 38 6.343 4.602 14.297 1.00 0.00 ATOM 306 CB TYR 38 3.901 2.692 13.547 1.00 0.00 ATOM 307 CG TYR 38 4.786 3.015 12.390 1.00 0.00 ATOM 308 CD1 TYR 38 4.365 3.888 11.413 1.00 0.00 ATOM 309 CD2 TYR 38 6.041 2.461 12.287 1.00 0.00 ATOM 310 CE1 TYR 38 5.177 4.192 10.347 1.00 0.00 ATOM 311 CE2 TYR 38 6.857 2.762 11.222 1.00 0.00 ATOM 312 CZ TYR 38 6.426 3.628 10.248 1.00 0.00 ATOM 313 OH TYR 38 7.262 3.938 9.154 1.00 0.00 ATOM 314 N THR 39 6.131 2.916 15.779 1.00 0.00 ATOM 315 CA THR 39 7.545 2.918 16.020 1.00 0.00 ATOM 316 C THR 39 8.033 1.512 15.890 1.00 0.00 ATOM 317 O THR 39 7.268 0.558 16.031 1.00 0.00 ATOM 318 CB THR 39 7.927 3.405 17.388 1.00 0.00 ATOM 319 OG1 THR 39 9.331 3.607 17.466 1.00 0.00 ATOM 320 CG2 THR 39 7.482 2.361 18.425 1.00 0.00 ATOM 321 N LEU 40 9.335 1.361 15.584 1.00 0.00 ATOM 322 CA LEU 40 9.923 0.062 15.457 1.00 0.00 ATOM 323 C LEU 40 10.854 -0.111 16.610 1.00 0.00 ATOM 324 O LEU 40 11.235 0.857 17.265 1.00 0.00 ATOM 325 CB LEU 40 10.756 -0.126 14.179 1.00 0.00 ATOM 326 CG LEU 40 9.930 -0.064 12.883 1.00 0.00 ATOM 327 CD1 LEU 40 9.287 1.318 12.703 1.00 0.00 ATOM 328 CD2 LEU 40 10.767 -0.503 11.670 1.00 0.00 ATOM 329 N CYS 41 11.218 -1.372 16.900 1.00 0.00 ATOM 330 CA CYS 41 12.117 -1.636 17.982 1.00 0.00 ATOM 331 C CYS 41 13.366 -0.802 17.754 1.00 0.00 ATOM 332 O CYS 41 13.632 0.102 18.590 1.00 0.00 ATOM 333 CB CYS 41 12.546 -3.110 18.079 1.00 0.00 ATOM 334 SG CYS 41 13.686 -3.423 19.463 1.00 0.00 TER END