####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS257_4 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS257_4.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 1 - 20 4.86 27.50 LCS_AVERAGE: 43.96 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 1 - 17 1.90 30.11 LCS_AVERAGE: 31.11 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 2 - 16 0.94 31.27 LCS_AVERAGE: 22.25 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 17 20 3 3 5 13 16 16 17 17 17 17 17 18 19 19 19 19 19 19 19 19 LCS_GDT Q 2 Q 2 15 17 20 8 12 14 15 16 16 17 17 17 17 17 18 19 19 19 19 19 19 19 19 LCS_GDT E 3 E 3 15 17 20 8 12 14 15 16 16 17 17 17 17 17 18 19 19 19 19 19 19 19 19 LCS_GDT T 4 T 4 15 17 20 8 12 14 15 16 16 17 17 17 17 17 18 19 19 19 19 19 19 19 19 LCS_GDT R 5 R 5 15 17 20 8 12 14 15 16 16 17 17 17 17 17 18 19 19 19 19 19 19 19 19 LCS_GDT K 6 K 6 15 17 20 8 12 14 15 16 16 17 17 17 17 17 18 19 19 19 19 19 19 19 19 LCS_GDT K 7 K 7 15 17 20 8 12 14 15 16 16 17 17 17 17 17 18 19 19 19 19 19 19 19 19 LCS_GDT C 8 C 8 15 17 20 8 12 14 15 16 16 17 17 17 17 17 18 19 19 19 19 19 19 19 19 LCS_GDT T 9 T 9 15 17 20 7 12 14 15 16 16 17 17 17 17 17 18 19 19 19 19 19 19 19 19 LCS_GDT E 10 E 10 15 17 20 7 12 14 15 16 16 17 17 17 17 17 18 19 19 19 19 19 19 19 19 LCS_GDT M 11 M 11 15 17 20 7 12 14 15 16 16 17 17 17 17 17 18 19 19 19 19 19 19 19 19 LCS_GDT K 12 K 12 15 17 20 8 12 14 15 16 16 17 17 17 17 17 18 19 19 19 19 19 19 19 19 LCS_GDT K 13 K 13 15 17 20 5 12 14 15 16 16 17 17 17 17 17 18 19 19 19 19 19 19 19 19 LCS_GDT K 14 K 14 15 17 20 6 12 14 15 16 16 17 17 17 17 17 18 19 19 19 19 19 19 19 19 LCS_GDT F 15 F 15 15 17 20 6 12 14 15 16 16 17 17 17 17 17 18 19 19 19 19 19 19 19 19 LCS_GDT K 16 K 16 15 17 20 4 6 11 15 16 16 17 17 17 17 17 18 19 19 19 19 19 19 19 19 LCS_GDT N 17 N 17 4 17 20 3 4 5 6 10 14 17 17 17 17 17 18 19 19 19 19 19 19 19 19 LCS_GDT C 18 C 18 5 8 20 3 5 5 6 7 8 9 10 11 13 14 18 19 19 19 19 19 19 19 19 LCS_GDT E 19 E 19 5 8 20 3 5 5 6 7 8 9 10 11 11 14 17 19 19 19 19 19 19 19 19 LCS_GDT V 20 V 20 5 8 20 3 5 5 6 7 8 9 10 11 11 12 12 13 13 14 15 16 16 16 17 LCS_GDT R 21 R 21 5 8 17 3 5 5 6 7 8 9 10 11 11 12 12 13 13 14 15 16 16 17 18 LCS_GDT C 22 C 22 5 8 17 3 5 5 6 7 8 8 9 10 11 14 15 15 16 16 16 17 17 17 18 LCS_GDT D 23 D 23 5 8 17 3 5 5 6 7 8 9 10 14 14 14 15 15 16 16 16 17 17 17 18 LCS_GDT E 24 E 24 3 12 17 3 3 3 8 10 13 13 13 14 14 14 15 15 16 16 16 17 17 17 18 LCS_GDT S 25 S 25 3 12 17 3 3 3 6 10 13 13 13 14 14 14 15 15 16 16 16 17 17 17 18 LCS_GDT N 26 N 26 3 12 17 0 4 7 8 10 13 13 13 14 14 14 15 15 16 16 16 17 17 17 18 LCS_GDT H 27 H 27 8 12 17 5 8 8 8 10 13 13 13 14 14 14 15 15 16 16 16 17 17 17 18 LCS_GDT C 28 C 28 8 12 17 5 8 8 8 10 13 13 13 14 14 14 15 15 16 16 16 17 17 17 18 LCS_GDT V 29 V 29 8 12 17 5 8 8 8 10 13 13 13 14 14 14 15 15 16 16 16 17 17 17 18 LCS_GDT E 30 E 30 8 12 17 5 8 8 8 10 13 13 13 14 14 14 15 15 16 16 16 17 17 17 18 LCS_GDT V 31 V 31 8 12 17 5 8 8 8 10 13 13 13 14 14 14 15 15 16 16 16 17 17 17 18 LCS_GDT R 32 R 32 8 12 17 4 8 8 8 10 13 13 13 14 14 14 15 15 16 16 16 17 17 17 18 LCS_GDT C 33 C 33 8 12 17 4 8 8 8 10 13 13 13 14 14 14 15 15 16 16 16 17 17 17 18 LCS_GDT S 34 S 34 8 12 17 4 8 8 8 10 13 13 13 14 14 14 15 15 16 16 16 17 17 17 18 LCS_GDT D 35 D 35 3 12 17 3 3 4 5 10 13 13 13 14 14 14 15 15 16 16 16 17 17 17 18 LCS_GDT T 36 T 36 6 12 17 3 4 6 6 10 13 13 13 14 14 14 15 15 16 16 16 17 17 17 18 LCS_GDT K 37 K 37 6 6 17 4 5 6 6 6 6 8 9 11 14 14 15 15 16 16 16 17 17 17 18 LCS_GDT Y 38 Y 38 6 6 17 4 5 6 6 6 6 8 9 9 9 11 15 15 16 16 16 17 17 17 18 LCS_GDT T 39 T 39 6 6 11 4 5 6 6 6 6 8 9 9 9 10 10 10 10 10 11 11 11 11 12 LCS_GDT L 40 L 40 6 6 11 4 5 6 6 6 6 8 9 9 9 10 10 10 10 10 11 11 11 11 12 LCS_GDT C 41 C 41 6 6 11 3 5 6 6 6 6 8 9 9 9 10 10 10 10 10 11 11 11 11 12 LCS_AVERAGE LCS_A: 32.44 ( 22.25 31.11 43.96 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 12 14 15 16 16 17 17 17 17 17 18 19 19 19 19 19 19 19 19 GDT PERCENT_AT 19.51 29.27 34.15 36.59 39.02 39.02 41.46 41.46 41.46 41.46 41.46 43.90 46.34 46.34 46.34 46.34 46.34 46.34 46.34 46.34 GDT RMS_LOCAL 0.34 0.57 0.75 0.94 1.21 1.21 1.90 1.90 1.90 1.90 1.90 2.79 3.56 3.56 3.56 3.56 3.56 3.56 3.56 3.56 GDT RMS_ALL_AT 32.02 31.82 31.53 31.27 31.02 31.02 30.11 30.11 30.11 30.11 30.11 28.96 28.26 28.26 28.26 28.26 28.26 28.26 28.26 28.26 # Checking swapping # possible swapping detected: E 10 E 10 # possible swapping detected: E 19 E 19 # possible swapping detected: E 24 E 24 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 2.494 0 0.644 0.688 3.883 34.545 27.879 3.883 LGA Q 2 Q 2 2.138 0 0.235 0.906 5.783 55.000 28.889 5.783 LGA E 3 E 3 0.945 0 0.054 1.221 6.520 77.727 46.263 3.742 LGA T 4 T 4 1.076 0 0.013 1.301 4.045 73.636 59.481 4.045 LGA R 5 R 5 0.895 0 0.021 0.785 4.802 81.818 50.744 4.802 LGA K 6 K 6 0.583 0 0.028 1.212 5.869 81.818 52.323 5.618 LGA K 7 K 7 0.633 0 0.028 0.840 3.683 81.818 58.586 3.683 LGA C 8 C 8 1.192 0 0.033 0.044 2.107 69.545 61.212 2.107 LGA T 9 T 9 1.248 0 0.027 1.108 2.394 65.455 59.481 1.895 LGA E 10 E 10 0.800 0 0.028 0.768 4.090 81.818 55.152 4.090 LGA M 11 M 11 0.699 0 0.077 0.682 2.256 73.636 70.227 2.256 LGA K 12 K 12 2.117 0 0.040 0.947 7.127 38.636 25.253 7.127 LGA K 13 K 13 2.456 0 0.029 0.518 4.950 41.364 25.051 4.950 LGA K 14 K 14 0.992 0 0.027 0.629 2.546 86.818 67.879 2.546 LGA F 15 F 15 0.800 0 0.473 1.451 6.229 56.364 32.727 6.229 LGA K 16 K 16 1.776 0 0.652 1.440 10.460 48.636 23.636 10.460 LGA N 17 N 17 5.244 0 0.188 1.127 8.139 6.818 3.409 6.679 LGA C 18 C 18 10.054 0 0.622 0.790 12.274 0.000 0.000 11.926 LGA E 19 E 19 12.035 0 0.183 1.154 15.812 0.000 0.000 10.936 LGA V 20 V 20 17.632 0 0.136 0.267 21.036 0.000 0.000 21.036 LGA R 21 R 21 22.310 0 0.023 1.060 27.168 0.000 0.000 24.380 LGA C 22 C 22 28.957 0 0.648 0.734 31.630 0.000 0.000 27.629 LGA D 23 D 23 32.107 0 0.082 1.029 33.169 0.000 0.000 28.228 LGA E 24 E 24 36.328 0 0.061 0.750 39.458 0.000 0.000 35.914 LGA S 25 S 25 38.526 0 0.570 0.897 40.049 0.000 0.000 40.049 LGA N 26 N 26 37.479 0 0.644 0.821 40.501 0.000 0.000 35.822 LGA H 27 H 27 39.814 0 0.383 1.184 42.248 0.000 0.000 41.575 LGA C 28 C 28 39.793 0 0.082 0.088 42.914 0.000 0.000 42.914 LGA V 29 V 29 37.277 0 0.064 0.986 38.307 0.000 0.000 33.632 LGA E 30 E 30 37.759 0 0.050 1.337 38.431 0.000 0.000 38.029 LGA V 31 V 31 36.152 0 0.043 1.099 37.830 0.000 0.000 36.103 LGA R 32 R 32 35.979 0 0.167 1.269 39.323 0.000 0.000 39.323 LGA C 33 C 33 35.581 0 0.175 0.764 37.907 0.000 0.000 37.907 LGA S 34 S 34 36.349 0 0.255 0.251 38.350 0.000 0.000 35.614 LGA D 35 D 35 36.029 0 0.624 1.375 40.579 0.000 0.000 33.593 LGA T 36 T 36 40.128 0 0.578 0.817 41.785 0.000 0.000 40.516 LGA K 37 K 37 45.871 0 0.106 1.489 55.018 0.000 0.000 55.018 LGA Y 38 Y 38 49.644 0 0.036 1.375 52.335 0.000 0.000 45.312 LGA T 39 T 39 56.223 0 0.157 0.343 59.887 0.000 0.000 55.709 LGA L 40 L 40 60.354 0 0.608 1.328 63.039 0.000 0.000 59.473 LGA C 41 C 41 67.213 0 0.241 0.759 69.194 0.000 0.000 67.791 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 18.498 18.450 19.032 25.743 18.249 4.922 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 17 1.90 38.415 37.399 0.851 LGA_LOCAL RMSD: 1.899 Number of atoms: 17 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 30.107 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 18.498 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.068906 * X + 0.585066 * Y + 0.808053 * Z + -0.072097 Y_new = -0.993377 * X + 0.114887 * Y + 0.001526 * Z + 18.323454 Z_new = -0.091942 * X + -0.802807 * Y + 0.589108 * Z + 5.520733 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.501542 0.092072 -0.937738 [DEG: -86.0320 5.2753 -53.7284 ] ZXZ: 1.572685 0.940842 -3.027564 [DEG: 90.1082 53.9063 -173.4666 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS257_4 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS257_4.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 17 1.90 37.399 18.50 REMARK ---------------------------------------------------------- MOLECULE T0955TS257_4 PFRMAT TS TARGET T0955 MODEL 4 PARENT N/A ATOM 1 CB SER 1 -3.089 -14.390 1.037 1.00 1.38 C ATOM 2 OG SER 1 -2.595 -15.437 1.856 1.00 1.38 O ATOM 4 C SER 1 -1.125 -12.838 1.313 1.00 1.38 C ATOM 5 O SER 1 -1.407 -11.652 1.527 1.00 1.38 O ATOM 8 N SER 1 -1.105 -14.629 -0.434 1.00 1.38 N ATOM 10 CA SER 1 -1.954 -13.656 0.313 1.00 1.38 C ATOM 11 N GLN 2 -0.109 -13.481 1.909 1.00 1.38 N ATOM 13 CA GLN 2 0.810 -12.877 2.901 1.00 1.38 C ATOM 14 CB GLN 2 1.640 -13.964 3.600 1.00 1.38 C ATOM 15 CG GLN 2 0.844 -14.884 4.520 1.00 1.38 C ATOM 16 CD GLN 2 1.709 -15.946 5.173 1.00 1.38 C ATOM 17 OE1 GLN 2 2.225 -15.750 6.274 1.00 1.38 O ATOM 18 NE2 GLN 2 1.871 -17.078 4.497 1.00 1.38 N ATOM 21 C GLN 2 1.749 -11.809 2.314 1.00 1.38 C ATOM 22 O GLN 2 1.988 -10.778 2.954 1.00 1.38 O ATOM 23 N GLU 3 2.236 -12.052 1.087 1.00 1.49 N ATOM 25 CA GLU 3 3.152 -11.150 0.358 1.00 1.49 C ATOM 26 CB GLU 3 3.726 -11.844 -0.887 1.00 1.49 C ATOM 27 CG GLU 3 4.699 -12.982 -0.593 1.00 1.49 C ATOM 28 CD GLU 3 5.250 -13.621 -1.854 1.00 1.49 C ATOM 29 OE1 GLU 3 6.301 -13.161 -2.346 1.00 1.49 O ATOM 30 OE2 GLU 3 4.632 -14.588 -2.351 1.00 1.49 O ATOM 31 C GLU 3 2.481 -9.826 -0.047 1.00 1.49 C ATOM 32 O GLU 3 3.101 -8.761 0.062 1.00 1.49 O ATOM 33 N THR 4 1.206 -9.908 -0.463 1.00 1.27 N ATOM 35 CA THR 4 0.383 -8.754 -0.884 1.00 1.27 C ATOM 36 CB THR 4 -0.942 -9.220 -1.577 1.00 1.27 C ATOM 37 OG1 THR 4 -0.748 -10.519 -2.153 1.00 1.27 O ATOM 39 CG2 THR 4 -1.345 -8.253 -2.699 1.00 1.27 C ATOM 40 C THR 4 0.066 -7.846 0.328 1.00 1.27 C ATOM 41 O THR 4 0.146 -6.614 0.219 1.00 1.27 O ATOM 42 N ARG 5 -0.242 -8.476 1.474 1.00 0.92 N ATOM 44 CA ARG 5 -0.559 -7.794 2.745 1.00 0.92 C ATOM 45 CB ARG 5 -1.141 -8.780 3.767 1.00 0.92 C ATOM 46 CG ARG 5 -2.550 -9.280 3.439 1.00 0.92 C ATOM 47 CD ARG 5 -3.105 -10.205 4.520 1.00 0.92 C ATOM 48 NE ARG 5 -2.428 -11.505 4.564 1.00 0.92 N ATOM 50 CZ ARG 5 -2.735 -12.503 5.394 1.00 0.92 C ATOM 51 NH1 ARG 5 -2.047 -13.635 5.338 1.00 0.92 N ATOM 54 NH2 ARG 5 -3.718 -12.383 6.281 1.00 0.92 N ATOM 57 C ARG 5 0.672 -7.087 3.336 1.00 0.92 C ATOM 58 O ARG 5 0.552 -5.970 3.855 1.00 0.92 O ATOM 59 N LYS 6 1.844 -7.730 3.206 1.00 1.06 N ATOM 61 CA LYS 6 3.139 -7.211 3.695 1.00 1.06 C ATOM 62 CB LYS 6 4.216 -8.305 3.674 1.00 1.06 C ATOM 63 CG LYS 6 4.116 -9.308 4.816 1.00 1.06 C ATOM 64 CD LYS 6 5.215 -10.356 4.728 1.00 1.06 C ATOM 65 CE LYS 6 5.117 -11.357 5.868 1.00 1.06 C ATOM 66 NZ LYS 6 6.186 -12.390 5.796 1.00 1.06 N ATOM 70 C LYS 6 3.623 -5.974 2.917 1.00 1.06 C ATOM 71 O LYS 6 4.024 -4.981 3.536 1.00 1.06 O ATOM 72 N LYS 7 3.553 -6.030 1.576 1.00 1.03 N ATOM 74 CA LYS 7 3.959 -4.912 0.702 1.00 1.03 C ATOM 75 CB LYS 7 4.184 -5.346 -0.766 1.00 1.03 C ATOM 76 CG LYS 7 3.028 -6.029 -1.515 1.00 1.03 C ATOM 77 CD LYS 7 3.361 -6.160 -2.998 1.00 1.03 C ATOM 78 CE LYS 7 2.310 -6.953 -3.765 1.00 1.03 C ATOM 79 NZ LYS 7 2.399 -8.422 -3.516 1.00 1.03 N ATOM 83 C LYS 7 3.014 -3.696 0.808 1.00 1.03 C ATOM 84 O LYS 7 3.471 -2.551 0.754 1.00 1.03 O ATOM 85 N CYS 8 1.713 -3.976 0.981 1.00 1.07 N ATOM 87 CA CYS 8 0.649 -2.959 1.119 1.00 1.07 C ATOM 88 CB CYS 8 -0.733 -3.622 1.028 1.00 1.07 C ATOM 89 SG CYS 8 -2.139 -2.483 0.940 1.00 1.07 S ATOM 90 C CYS 8 0.775 -2.160 2.434 1.00 1.07 C ATOM 91 O CYS 8 0.678 -0.926 2.416 1.00 1.07 O ATOM 92 N THR 9 1.018 -2.866 3.553 1.00 1.17 N ATOM 94 CA THR 9 1.181 -2.253 4.889 1.00 1.17 C ATOM 95 CB THR 9 1.042 -3.311 6.058 1.00 1.17 C ATOM 96 OG1 THR 9 1.082 -2.642 7.325 1.00 1.17 O ATOM 98 CG2 THR 9 2.142 -4.388 6.016 1.00 1.17 C ATOM 99 C THR 9 2.482 -1.421 4.999 1.00 1.17 C ATOM 100 O THR 9 2.477 -0.335 5.589 1.00 1.17 O ATOM 101 N GLU 10 3.568 -1.938 4.401 1.00 1.10 N ATOM 103 CA GLU 10 4.894 -1.286 4.374 1.00 1.10 C ATOM 104 CB GLU 10 5.975 -2.257 3.883 1.00 1.10 C ATOM 105 CG GLU 10 6.390 -3.309 4.906 1.00 1.10 C ATOM 106 CD GLU 10 7.449 -4.257 4.376 1.00 1.10 C ATOM 107 OE1 GLU 10 8.652 -3.959 4.537 1.00 1.10 O ATOM 108 OE2 GLU 10 7.080 -5.303 3.801 1.00 1.10 O ATOM 109 C GLU 10 4.897 -0.013 3.510 1.00 1.10 C ATOM 110 O GLU 10 5.528 0.983 3.879 1.00 1.10 O ATOM 111 N MET 11 4.165 -0.055 2.384 1.00 1.17 N ATOM 113 CA MET 11 4.027 1.069 1.431 1.00 1.17 C ATOM 114 CG MET 11 3.845 1.247 -1.177 1.00 1.17 C ATOM 115 SD MET 11 5.495 0.734 -1.726 1.00 1.17 S ATOM 116 CE MET 11 6.469 2.178 -1.296 1.00 1.17 C ATOM 117 C MET 11 3.218 2.224 2.062 1.00 1.17 C ATOM 118 O MET 11 3.595 3.393 1.919 1.00 1.17 O ATOM 119 CB MET 11 3.357 0.585 0.129 1.00 1.17 C ATOM 120 N LYS 12 2.134 1.873 2.774 1.00 1.47 N ATOM 122 CA LYS 12 1.244 2.831 3.464 1.00 1.47 C ATOM 123 CB LYS 12 -0.048 2.145 3.924 1.00 1.47 C ATOM 124 CG LYS 12 -1.064 1.911 2.814 1.00 1.47 C ATOM 125 CD LYS 12 -2.349 1.295 3.359 1.00 1.47 C ATOM 126 CE LYS 12 -3.446 1.216 2.298 1.00 1.47 C ATOM 127 NZ LYS 12 -3.147 0.265 1.186 1.00 1.47 N ATOM 131 C LYS 12 1.929 3.521 4.655 1.00 1.47 C ATOM 132 O LYS 12 1.743 4.726 4.861 1.00 1.47 O ATOM 133 N LYS 13 2.711 2.747 5.425 1.00 1.63 N ATOM 135 CA LYS 13 3.474 3.232 6.595 1.00 1.63 C ATOM 136 CB LYS 13 3.984 2.059 7.442 1.00 1.63 C ATOM 137 CG LYS 13 2.919 1.395 8.306 1.00 1.63 C ATOM 138 CD LYS 13 3.515 0.283 9.162 1.00 1.63 C ATOM 139 CE LYS 13 2.497 -0.304 10.138 1.00 1.63 C ATOM 140 NZ LYS 13 1.395 -1.063 9.476 1.00 1.63 N ATOM 144 C LYS 13 4.645 4.156 6.207 1.00 1.63 C ATOM 145 O LYS 13 4.852 5.191 6.849 1.00 1.63 O ATOM 146 N LYS 14 5.390 3.764 5.161 1.00 1.57 N ATOM 148 CA LYS 14 6.548 4.515 4.626 1.00 1.57 C ATOM 149 CB LYS 14 7.380 3.637 3.683 1.00 1.57 C ATOM 150 CG LYS 14 8.247 2.599 4.386 1.00 1.57 C ATOM 151 CD LYS 14 9.049 1.777 3.384 1.00 1.57 C ATOM 152 CE LYS 14 9.924 0.728 4.066 1.00 1.57 C ATOM 153 NZ LYS 14 11.052 1.312 4.854 1.00 1.57 N ATOM 157 C LYS 14 6.193 5.840 3.926 1.00 1.57 C ATOM 158 O LYS 14 6.932 6.823 4.057 1.00 1.57 O ATOM 159 N PHE 15 5.066 5.852 3.198 1.00 1.70 N ATOM 161 CA PHE 15 4.563 7.030 2.455 1.00 1.70 C ATOM 162 CB PHE 15 3.426 6.601 1.484 1.00 1.70 C ATOM 163 CG PHE 15 3.249 7.502 0.254 1.00 1.70 C ATOM 164 CD1 PHE 15 3.946 7.230 -0.949 1.00 1.70 C ATOM 165 CD2 PHE 15 2.357 8.601 0.283 1.00 1.70 C ATOM 166 CE1 PHE 15 3.759 8.037 -2.104 1.00 1.70 C ATOM 167 CE2 PHE 15 2.160 9.417 -0.865 1.00 1.70 C ATOM 168 CZ PHE 15 2.863 9.134 -2.062 1.00 1.70 C ATOM 169 C PHE 15 4.084 8.166 3.391 1.00 1.70 C ATOM 170 O PHE 15 4.420 9.335 3.165 1.00 1.70 O ATOM 171 N LYS 16 3.307 7.803 4.422 1.00 1.97 N ATOM 173 CA LYS 16 2.763 8.743 5.423 1.00 1.97 C ATOM 174 CB LYS 16 1.233 8.875 5.295 1.00 1.97 C ATOM 175 CG LYS 16 0.754 9.581 4.031 1.00 1.97 C ATOM 176 CD LYS 16 -0.768 9.674 3.992 1.00 1.97 C ATOM 177 CE LYS 16 -1.271 10.391 2.741 1.00 1.97 C ATOM 178 NZ LYS 16 -1.053 9.619 1.481 1.00 1.97 N ATOM 182 C LYS 16 3.135 8.284 6.843 1.00 1.97 C ATOM 183 O LYS 16 2.900 7.121 7.204 1.00 1.97 O ATOM 184 N ASN 17 3.751 9.190 7.616 1.00 2.60 N ATOM 186 CA ASN 17 4.177 8.932 9.006 1.00 2.60 C ATOM 187 CB ASN 17 5.716 8.970 9.133 1.00 2.60 C ATOM 188 CG ASN 17 6.404 7.853 8.356 1.00 2.60 C ATOM 189 OD1 ASN 17 6.753 8.018 7.185 1.00 2.60 O ATOM 190 ND2 ASN 17 6.615 6.715 9.012 1.00 2.60 N ATOM 193 C ASN 17 3.531 9.932 9.982 1.00 2.60 C ATOM 194 O ASN 17 2.745 9.525 10.845 1.00 2.60 O ATOM 195 N CYS 18 3.868 11.223 9.835 1.00 3.55 N ATOM 197 CA CYS 18 3.351 12.321 10.675 1.00 3.55 C ATOM 198 CB CYS 18 4.414 12.789 11.685 1.00 3.55 C ATOM 199 SG CYS 18 6.005 13.261 10.956 1.00 3.55 S ATOM 200 C CYS 18 2.894 13.509 9.817 1.00 3.55 C ATOM 201 O CYS 18 1.894 14.159 10.143 1.00 3.55 O ATOM 202 N GLU 19 3.630 13.767 8.720 1.00 3.81 N ATOM 204 CA GLU 19 3.404 14.862 7.734 1.00 3.81 C ATOM 205 CB GLU 19 2.169 14.598 6.843 1.00 3.81 C ATOM 206 CG GLU 19 2.313 13.420 5.884 1.00 3.81 C ATOM 207 CD GLU 19 1.085 13.218 5.014 1.00 3.81 C ATOM 208 OE1 GLU 19 1.029 13.807 3.915 1.00 3.81 O ATOM 209 OE2 GLU 19 0.177 12.466 5.430 1.00 3.81 O ATOM 210 C GLU 19 3.353 16.296 8.304 1.00 3.81 C ATOM 211 O GLU 19 2.613 16.565 9.259 1.00 3.81 O ATOM 212 N VAL 20 4.162 17.192 7.716 1.00 4.85 N ATOM 214 CA VAL 20 4.259 18.613 8.116 1.00 4.85 C ATOM 215 CB VAL 20 5.753 19.044 8.440 1.00 4.85 C ATOM 216 CG1 VAL 20 5.789 20.341 9.269 1.00 4.85 C ATOM 217 CG2 VAL 20 6.491 17.935 9.192 1.00 4.85 C ATOM 218 C VAL 20 3.686 19.484 6.972 1.00 4.85 C ATOM 219 O VAL 20 3.871 19.161 5.789 1.00 4.85 O ATOM 220 N ARG 21 2.974 20.556 7.346 1.00 5.87 N ATOM 222 CA ARG 21 2.353 21.506 6.403 1.00 5.87 C ATOM 223 CB ARG 21 0.816 21.583 6.607 1.00 5.87 C ATOM 224 CG ARG 21 0.303 21.701 8.058 1.00 5.87 C ATOM 225 CD ARG 21 -1.218 21.698 8.109 1.00 5.87 C ATOM 226 NE ARG 21 -1.724 21.793 9.479 1.00 5.87 N ATOM 228 CZ ARG 21 -3.002 21.660 9.837 1.00 5.87 C ATOM 229 NH1 ARG 21 -3.338 21.768 11.115 1.00 5.87 N ATOM 232 NH2 ARG 21 -3.949 21.421 8.933 1.00 5.87 N ATOM 235 C ARG 21 3.000 22.907 6.443 1.00 5.87 C ATOM 236 O ARG 21 3.164 23.487 7.524 1.00 5.87 O ATOM 237 N CYS 22 3.387 23.412 5.262 1.00 6.85 N ATOM 239 CA CYS 22 4.023 24.731 5.093 1.00 6.85 C ATOM 240 CB CYS 22 5.418 24.580 4.464 1.00 6.85 C ATOM 241 SG CYS 22 5.456 23.665 2.901 1.00 6.85 S ATOM 242 C CYS 22 3.160 25.669 4.235 1.00 6.85 C ATOM 243 O CYS 22 3.156 26.887 4.460 1.00 6.85 O ATOM 244 N ASP 23 2.437 25.088 3.267 1.00 7.09 N ATOM 246 CA ASP 23 1.552 25.818 2.338 1.00 7.09 C ATOM 247 CB ASP 23 1.773 25.339 0.880 1.00 7.09 C ATOM 248 CG ASP 23 1.771 23.810 0.732 1.00 7.09 C ATOM 249 OD1 ASP 23 2.856 23.196 0.833 1.00 7.09 O ATOM 250 OD2 ASP 23 0.686 23.232 0.501 1.00 7.09 O ATOM 251 C ASP 23 0.059 25.759 2.725 1.00 7.09 C ATOM 252 O ASP 23 -0.345 24.878 3.493 1.00 7.09 O ATOM 253 N GLU 24 -0.736 26.702 2.184 1.00 10.18 N ATOM 255 CA GLU 24 -2.204 26.868 2.391 1.00 10.18 C ATOM 256 CB GLU 24 -3.010 25.646 1.899 1.00 10.18 C ATOM 257 CG GLU 24 -2.990 25.434 0.387 1.00 10.18 C ATOM 258 CD GLU 24 -3.797 24.225 -0.046 1.00 10.18 C ATOM 259 OE1 GLU 24 -5.008 24.379 -0.311 1.00 10.18 O ATOM 260 OE2 GLU 24 -3.219 23.119 -0.124 1.00 10.18 O ATOM 261 C GLU 24 -2.671 27.273 3.802 1.00 10.18 C ATOM 262 O GLU 24 -3.628 28.047 3.935 1.00 10.18 O ATOM 263 N SER 25 -1.984 26.761 4.840 1.00 8.78 N ATOM 265 CA SER 25 -2.246 27.002 6.288 1.00 8.78 C ATOM 266 CB SER 25 -1.833 28.428 6.718 1.00 8.78 C ATOM 267 OG SER 25 -2.545 29.423 6.002 1.00 8.78 O ATOM 269 C SER 25 -3.663 26.669 6.809 1.00 8.78 C ATOM 270 O SER 25 -4.631 26.697 6.041 1.00 8.78 O ATOM 271 N ASN 26 -3.761 26.360 8.112 1.00 7.87 N ATOM 273 CA ASN 26 -5.026 26.010 8.787 1.00 7.87 C ATOM 274 CB ASN 26 -4.802 24.875 9.816 1.00 7.87 C ATOM 275 CG ASN 26 -3.619 25.133 10.760 1.00 7.87 C ATOM 276 OD1 ASN 26 -3.786 25.701 11.841 1.00 7.87 O ATOM 277 ND2 ASN 26 -2.429 24.703 10.353 1.00 7.87 N ATOM 280 C ASN 26 -5.776 27.199 9.424 1.00 7.87 C ATOM 281 O ASN 26 -5.163 28.027 10.110 1.00 7.87 O ATOM 282 N HIS 27 -7.097 27.259 9.177 1.00 11.27 N ATOM 284 CA HIS 27 -8.054 28.293 9.663 1.00 11.27 C ATOM 285 CG HIS 27 -9.340 26.711 11.219 1.00 11.27 C ATOM 286 CD2 HIS 27 -10.646 26.498 11.511 1.00 11.27 C ATOM 287 ND1 HIS 27 -8.780 25.461 11.050 1.00 11.27 N ATOM 289 CE1 HIS 27 -9.705 24.536 11.232 1.00 11.27 C ATOM 290 NE2 HIS 27 -10.845 25.138 11.512 1.00 11.27 N ATOM 292 C HIS 27 -7.638 29.775 9.542 1.00 11.27 C ATOM 293 O HIS 27 -6.689 30.218 10.205 1.00 11.27 O ATOM 294 CB HIS 27 -8.547 27.981 11.100 1.00 11.27 C ATOM 295 N CYS 28 -8.360 30.517 8.682 1.00 12.54 N ATOM 297 CA CYS 28 -8.182 31.964 8.373 1.00 12.54 C ATOM 298 CB CYS 28 -8.874 32.852 9.425 1.00 12.54 C ATOM 299 SG CYS 28 -10.658 32.596 9.563 1.00 12.54 S ATOM 300 C CYS 28 -6.754 32.488 8.093 1.00 12.54 C ATOM 301 O CYS 28 -5.829 32.237 8.877 1.00 12.54 O ATOM 302 N VAL 29 -6.601 33.207 6.971 1.00 9.72 N ATOM 304 CA VAL 29 -5.318 33.798 6.535 1.00 9.72 C ATOM 305 CB VAL 29 -4.891 33.328 5.083 1.00 9.72 C ATOM 306 CG1 VAL 29 -4.364 31.903 5.136 1.00 9.72 C ATOM 307 CG2 VAL 29 -6.063 33.412 4.080 1.00 9.72 C ATOM 308 C VAL 29 -5.302 35.339 6.649 1.00 9.72 C ATOM 309 O VAL 29 -6.228 36.012 6.173 1.00 9.72 O ATOM 310 N GLU 30 -4.270 35.868 7.322 1.00 8.59 N ATOM 312 CA GLU 30 -4.080 37.316 7.537 1.00 8.59 C ATOM 313 CB GLU 30 -4.136 37.675 9.050 1.00 8.59 C ATOM 314 CG GLU 30 -3.313 36.799 10.046 1.00 8.59 C ATOM 315 CD GLU 30 -1.928 37.362 10.352 1.00 8.59 C ATOM 316 OE1 GLU 30 -0.961 36.974 9.663 1.00 8.59 O ATOM 317 OE2 GLU 30 -1.814 38.193 11.279 1.00 8.59 O ATOM 318 C GLU 30 -2.793 37.859 6.887 1.00 8.59 C ATOM 319 O GLU 30 -1.746 37.201 6.943 1.00 8.59 O ATOM 320 N VAL 31 -2.897 39.045 6.270 1.00 9.15 N ATOM 322 CA VAL 31 -1.778 39.735 5.597 1.00 9.15 C ATOM 323 CB VAL 31 -2.120 40.041 4.061 1.00 9.15 C ATOM 324 CG1 VAL 31 -3.301 41.023 3.909 1.00 9.15 C ATOM 325 CG2 VAL 31 -0.878 40.509 3.283 1.00 9.15 C ATOM 326 C VAL 31 -1.373 40.998 6.406 1.00 9.15 C ATOM 327 O VAL 31 -2.245 41.758 6.848 1.00 9.15 O ATOM 328 N ARG 32 -0.059 41.178 6.605 1.00 7.39 N ATOM 330 CA ARG 32 0.509 42.318 7.350 1.00 7.39 C ATOM 331 CB ARG 32 1.384 41.836 8.537 1.00 7.39 C ATOM 332 CG ARG 32 2.407 40.708 8.245 1.00 7.39 C ATOM 333 CD ARG 32 3.193 40.305 9.491 1.00 7.39 C ATOM 334 NE ARG 32 2.366 39.617 10.488 1.00 7.39 N ATOM 336 CZ ARG 32 2.799 39.164 11.666 1.00 7.39 C ATOM 337 NH1 ARG 32 1.951 38.557 12.484 1.00 7.39 N ATOM 340 NH2 ARG 32 4.068 39.311 12.036 1.00 7.39 N ATOM 343 C ARG 32 1.270 43.325 6.462 1.00 7.39 C ATOM 344 O ARG 32 2.141 42.930 5.675 1.00 7.39 O ATOM 345 N CYS 33 0.901 44.609 6.582 1.00 7.97 N ATOM 347 CA CYS 33 1.508 45.722 5.829 1.00 7.97 C ATOM 348 CB CYS 33 0.501 46.320 4.830 1.00 7.97 C ATOM 349 SG CYS 33 -1.076 46.840 5.554 1.00 7.97 S ATOM 350 C CYS 33 2.006 46.814 6.788 1.00 7.97 C ATOM 351 O CYS 33 3.069 47.403 6.557 1.00 7.97 O ATOM 352 N SER 34 1.229 47.067 7.852 1.00 7.74 N ATOM 354 CA SER 34 1.530 48.076 8.885 1.00 7.74 C ATOM 355 CB SER 34 0.352 49.050 9.036 1.00 7.74 C ATOM 356 OG SER 34 0.090 49.730 7.820 1.00 7.74 O ATOM 358 C SER 34 1.836 47.408 10.236 1.00 7.74 C ATOM 359 O SER 34 2.427 48.038 11.125 1.00 7.74 O ATOM 360 N ASP 35 1.449 46.124 10.364 1.00 8.94 N ATOM 362 CA ASP 35 1.618 45.252 11.560 1.00 8.94 C ATOM 363 CB ASP 35 3.116 44.986 11.871 1.00 8.94 C ATOM 364 CG ASP 35 3.368 43.605 12.484 1.00 8.94 C ATOM 365 OD1 ASP 35 3.340 43.487 13.729 1.00 8.94 O ATOM 366 OD2 ASP 35 3.606 42.644 11.719 1.00 8.94 O ATOM 367 C ASP 35 0.872 45.742 12.823 1.00 8.94 C ATOM 368 O ASP 35 0.870 46.941 13.120 1.00 8.94 O ATOM 369 N THR 36 0.267 44.786 13.554 1.00 10.65 N ATOM 371 CA THR 36 -0.524 44.972 14.806 1.00 10.65 C ATOM 372 CB THR 36 0.374 45.144 16.088 1.00 10.65 C ATOM 373 OG1 THR 36 1.296 46.224 15.889 1.00 10.65 O ATOM 375 CG2 THR 36 1.145 43.863 16.388 1.00 10.65 C ATOM 376 C THR 36 -1.649 46.034 14.797 1.00 10.65 C ATOM 377 O THR 36 -2.820 45.683 14.987 1.00 10.65 O ATOM 378 N LYS 37 -1.287 47.309 14.581 1.00 8.50 N ATOM 380 CA LYS 37 -2.232 48.441 14.535 1.00 8.50 C ATOM 381 CB LYS 37 -1.861 49.510 15.576 1.00 8.50 C ATOM 382 CG LYS 37 -2.069 49.086 17.027 1.00 8.50 C ATOM 383 CD LYS 37 -1.687 50.199 17.990 1.00 8.50 C ATOM 384 CE LYS 37 -1.900 49.775 19.433 1.00 8.50 C ATOM 385 NZ LYS 37 -1.534 50.856 20.390 1.00 8.50 N ATOM 389 C LYS 37 -2.270 49.073 13.136 1.00 8.50 C ATOM 390 O LYS 37 -1.245 49.105 12.441 1.00 8.50 O ATOM 391 N TYR 38 -3.455 49.559 12.737 1.00 8.02 N ATOM 393 CA TYR 38 -3.688 50.202 11.430 1.00 8.02 C ATOM 394 CB TYR 38 -4.838 49.481 10.672 1.00 8.02 C ATOM 395 CG TYR 38 -4.891 49.653 9.144 1.00 8.02 C ATOM 396 CD1 TYR 38 -4.228 48.745 8.282 1.00 8.02 C ATOM 397 CE1 TYR 38 -4.302 48.882 6.867 1.00 8.02 C ATOM 398 CD2 TYR 38 -5.634 50.704 8.551 1.00 8.02 C ATOM 399 CE2 TYR 38 -5.715 50.847 7.138 1.00 8.02 C ATOM 400 CZ TYR 38 -5.046 49.933 6.308 1.00 8.02 C ATOM 401 OH TYR 38 -5.118 50.065 4.940 1.00 8.02 O ATOM 403 C TYR 38 -4.025 51.693 11.634 1.00 8.02 C ATOM 404 O TYR 38 -4.714 52.047 12.600 1.00 8.02 O ATOM 405 N THR 39 -3.523 52.544 10.726 1.00 8.18 N ATOM 407 CA THR 39 -3.733 54.005 10.747 1.00 8.18 C ATOM 408 CB THR 39 -2.373 54.783 10.650 1.00 8.18 C ATOM 409 OG1 THR 39 -1.323 53.976 11.197 1.00 8.18 O ATOM 411 CG2 THR 39 -2.431 56.098 11.443 1.00 8.18 C ATOM 412 C THR 39 -4.660 54.409 9.576 1.00 8.18 C ATOM 413 O THR 39 -4.583 53.819 8.488 1.00 8.18 O ATOM 414 N LEU 40 -5.543 55.386 9.831 1.00 11.96 N ATOM 416 CA LEU 40 -6.507 55.908 8.845 1.00 11.96 C ATOM 417 CB LEU 40 -7.953 55.843 9.424 1.00 11.96 C ATOM 418 CG LEU 40 -9.359 55.832 8.741 1.00 11.96 C ATOM 419 CD1 LEU 40 -9.700 57.165 8.052 1.00 11.96 C ATOM 420 CD2 LEU 40 -9.556 54.646 7.780 1.00 11.96 C ATOM 421 C LEU 40 -6.137 57.357 8.471 1.00 11.96 C ATOM 422 O LEU 40 -6.327 57.767 7.319 1.00 11.96 O ATOM 423 N CYS 41 -5.610 58.106 9.451 1.00 12.35 N ATOM 425 CA CYS 41 -5.193 59.511 9.287 1.00 12.35 C ATOM 426 CB CYS 41 -5.788 60.379 10.408 1.00 12.35 C ATOM 427 SG CYS 41 -5.416 59.815 12.088 1.00 12.35 S ATOM 428 C CYS 41 -3.670 59.661 9.257 1.00 12.35 C ATOM 429 O CYS 41 -3.180 60.557 8.536 1.00 12.35 O ATOM 430 OXT CYS 41 -2.986 58.872 9.944 1.00 12.35 O TER END