####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS241_2 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS241_2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 1.70 1.70 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 1.70 1.70 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 2 - 21 0.95 2.07 LCS_AVERAGE: 38.43 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 15 41 41 3 3 3 5 23 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Q 2 Q 2 20 41 41 6 16 27 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 3 E 3 20 41 41 11 18 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 4 T 4 20 41 41 11 20 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 5 R 5 20 41 41 11 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 6 K 6 20 41 41 11 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 7 K 7 20 41 41 11 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 8 C 8 20 41 41 11 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 9 T 9 20 41 41 11 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 10 E 10 20 41 41 11 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT M 11 M 11 20 41 41 11 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 12 K 12 20 41 41 11 20 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 13 K 13 20 41 41 9 20 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 14 K 14 20 41 41 11 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT F 15 F 15 20 41 41 7 20 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 16 K 16 20 41 41 3 14 25 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 17 N 17 20 41 41 9 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 18 C 18 20 41 41 6 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 19 E 19 20 41 41 8 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 20 V 20 20 41 41 7 16 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 21 R 21 20 41 41 7 16 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 22 C 22 7 41 41 3 16 24 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 23 D 23 7 41 41 4 16 28 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 24 E 24 5 41 41 6 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 25 S 25 5 41 41 9 20 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 26 N 26 5 41 41 4 11 17 32 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT H 27 H 27 14 41 41 7 15 19 28 35 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 28 C 28 14 41 41 8 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 29 V 29 14 41 41 7 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 30 E 30 14 41 41 7 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 31 V 31 14 41 41 9 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 32 R 32 14 41 41 9 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 33 C 33 14 41 41 6 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 34 S 34 14 41 41 3 15 19 28 35 37 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 35 D 35 14 41 41 3 3 18 21 31 37 39 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 36 T 36 14 41 41 5 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 37 K 37 14 41 41 5 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Y 38 Y 38 14 41 41 7 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 39 T 39 14 41 41 7 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT L 40 L 40 14 41 41 7 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 41 C 41 6 41 41 0 20 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_AVERAGE LCS_A: 79.48 ( 38.43 100.00 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 11 21 30 34 37 38 40 40 41 41 41 41 41 41 41 41 41 41 41 41 GDT PERCENT_AT 26.83 51.22 73.17 82.93 90.24 92.68 97.56 97.56 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.29 0.75 0.90 1.06 1.26 1.36 1.55 1.55 1.70 1.70 1.70 1.70 1.70 1.70 1.70 1.70 1.70 1.70 1.70 1.70 GDT RMS_ALL_AT 2.60 1.75 1.76 1.75 1.78 1.76 1.71 1.71 1.70 1.70 1.70 1.70 1.70 1.70 1.70 1.70 1.70 1.70 1.70 1.70 # Checking swapping # possible swapping detected: E 3 E 3 # possible swapping detected: D 23 D 23 # possible swapping detected: E 30 E 30 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 3.153 0 0.589 0.901 6.023 19.545 14.848 6.023 LGA Q 2 Q 2 2.354 0 0.248 0.876 4.684 44.545 26.869 4.684 LGA E 3 E 3 1.431 0 0.040 1.736 7.617 65.909 35.556 6.602 LGA T 4 T 4 1.152 0 0.062 1.258 3.709 69.545 56.104 3.709 LGA R 5 R 5 0.689 0 0.040 1.107 2.786 81.818 65.620 2.786 LGA K 6 K 6 0.691 0 0.057 0.798 2.897 86.364 67.475 1.508 LGA K 7 K 7 0.632 0 0.058 0.783 4.562 81.818 53.737 4.562 LGA C 8 C 8 0.677 0 0.039 0.770 3.323 81.818 71.212 3.323 LGA T 9 T 9 0.592 0 0.030 0.051 0.873 86.364 84.416 0.675 LGA E 10 E 10 0.439 0 0.055 0.679 1.747 100.000 76.162 1.729 LGA M 11 M 11 0.717 0 0.065 0.806 1.949 81.818 70.000 1.949 LGA K 12 K 12 1.156 0 0.123 1.305 6.480 61.818 44.646 6.480 LGA K 13 K 13 1.115 0 0.062 0.536 3.236 73.636 57.576 1.699 LGA K 14 K 14 0.426 0 0.032 0.613 2.132 86.818 81.414 2.132 LGA F 15 F 15 1.085 0 0.213 0.337 2.363 59.091 64.959 1.508 LGA K 16 K 16 2.145 0 0.433 1.162 9.995 58.636 27.879 9.995 LGA N 17 N 17 0.350 0 0.442 1.215 5.736 86.818 56.136 3.185 LGA C 18 C 18 1.113 0 0.059 0.861 4.393 69.545 58.182 4.393 LGA E 19 E 19 0.921 0 0.254 0.396 1.423 73.636 72.727 1.423 LGA V 20 V 20 1.523 0 0.073 0.092 2.028 47.727 49.091 1.862 LGA R 21 R 21 1.726 0 0.122 1.420 7.464 51.364 30.744 4.209 LGA C 22 C 22 2.400 0 0.030 0.050 2.927 44.545 38.788 2.927 LGA D 23 D 23 2.069 0 0.205 1.197 5.416 30.455 21.364 3.991 LGA E 24 E 24 0.454 0 0.142 0.881 5.485 82.273 49.495 4.711 LGA S 25 S 25 1.228 0 0.205 0.728 3.058 59.091 50.909 3.058 LGA N 26 N 26 3.367 0 0.128 1.155 9.896 44.091 22.045 8.331 LGA H 27 H 27 3.455 0 0.194 1.253 11.243 25.909 10.364 10.815 LGA C 28 C 28 0.647 0 0.253 0.763 3.252 73.636 65.758 3.252 LGA V 29 V 29 1.136 0 0.025 0.207 1.349 65.455 65.455 1.200 LGA E 30 E 30 0.980 0 0.022 0.656 2.276 77.727 66.465 1.936 LGA V 31 V 31 0.546 0 0.131 0.158 1.022 86.364 82.078 0.849 LGA R 32 R 32 0.308 0 0.018 1.066 4.165 86.364 69.421 1.540 LGA C 33 C 33 1.167 0 0.508 0.608 2.169 62.727 61.212 1.521 LGA S 34 S 34 3.375 0 0.516 0.491 6.558 11.818 10.606 3.558 LGA D 35 D 35 4.950 0 0.071 0.164 6.970 4.545 2.273 6.970 LGA T 36 T 36 1.472 0 0.178 1.085 2.486 66.818 60.779 2.233 LGA K 37 K 37 0.716 0 0.134 0.720 1.794 81.818 73.131 1.794 LGA Y 38 Y 38 1.137 0 0.032 1.261 6.138 69.545 42.727 6.138 LGA T 39 T 39 1.086 0 0.184 0.252 1.961 61.818 63.636 0.846 LGA L 40 L 40 0.904 0 0.284 1.291 3.400 74.091 55.682 3.400 LGA C 41 C 41 1.031 0 0.390 0.783 6.214 43.636 30.390 6.214 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 1.696 1.765 2.950 63.936 51.413 28.204 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 40 1.55 82.927 91.592 2.430 LGA_LOCAL RMSD: 1.546 Number of atoms: 40 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 1.712 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 1.696 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.527869 * X + 0.446546 * Y + -0.722461 * Z + -11.342617 Y_new = 0.457871 * X + 0.566817 * Y + 0.684889 * Z + -78.269043 Z_new = 0.715338 * X + -0.692326 * Y + 0.094745 * Z + -5.934416 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.714506 -0.797108 -1.434791 [DEG: 40.9382 -45.6709 -82.2075 ] ZXZ: -2.329504 1.475909 2.339848 [DEG: -133.4707 84.5634 134.0634 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS241_2 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS241_2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 40 1.55 91.592 1.70 REMARK ---------------------------------------------------------- MOLECULE T0955TS241_2 PFRMAT TS TARGET T0955 MODEL 2 PARENT N/A ATOM 1 N SER 1 -0.891 -13.730 0.118 1.00 0.00 ATOM 5 CA SER 1 -1.966 -12.929 0.709 1.00 0.00 ATOM 7 CB SER 1 -3.161 -13.859 0.954 1.00 0.00 ATOM 10 OG SER 1 -4.260 -13.199 1.540 1.00 0.00 ATOM 12 C SER 1 -1.450 -12.235 1.991 1.00 0.00 ATOM 13 O SER 1 -1.584 -11.022 2.231 1.00 0.00 ATOM 14 N GLN 2 -0.697 -13.003 2.779 1.00 0.00 ATOM 16 CA GLN 2 0.184 -12.463 3.815 1.00 0.00 ATOM 18 CB GLN 2 0.868 -13.618 4.586 1.00 0.00 ATOM 21 CG GLN 2 -0.108 -14.587 5.280 1.00 0.00 ATOM 24 CD GLN 2 0.610 -15.646 6.122 1.00 0.00 ATOM 25 OE1 GLN 2 0.827 -15.484 7.309 1.00 0.00 ATOM 26 NE2 GLN 2 0.985 -16.778 5.565 1.00 0.00 ATOM 29 C GLN 2 1.252 -11.541 3.205 1.00 0.00 ATOM 30 O GLN 2 1.540 -10.479 3.747 1.00 0.00 ATOM 31 N GLU 3 1.808 -11.915 2.047 1.00 0.00 ATOM 33 CA GLU 3 2.867 -11.167 1.361 1.00 0.00 ATOM 35 CB GLU 3 3.524 -12.070 0.297 1.00 0.00 ATOM 38 CG GLU 3 4.751 -12.820 0.829 1.00 0.00 ATOM 41 CD GLU 3 5.801 -11.835 1.355 1.00 0.00 ATOM 42 OE1 GLU 3 6.387 -11.071 0.549 1.00 0.00 ATOM 43 OE2 GLU 3 5.943 -11.706 2.586 1.00 0.00 ATOM 44 C GLU 3 2.394 -9.851 0.715 1.00 0.00 ATOM 45 O GLU 3 3.145 -8.863 0.699 1.00 0.00 ATOM 46 N THR 4 1.168 -9.825 0.187 1.00 0.00 ATOM 48 CA THR 4 0.513 -8.595 -0.278 1.00 0.00 ATOM 50 CB THR 4 -0.791 -8.872 -1.049 1.00 0.00 ATOM 52 CG2 THR 4 -0.503 -9.116 -2.526 1.00 0.00 ATOM 56 OG1 THR 4 -1.386 -10.038 -0.553 1.00 0.00 ATOM 58 C THR 4 0.214 -7.671 0.888 1.00 0.00 ATOM 59 O THR 4 0.653 -6.524 0.837 1.00 0.00 ATOM 60 N ARG 5 -0.404 -8.149 1.986 1.00 0.00 ATOM 62 CA ARG 5 -0.603 -7.281 3.177 1.00 0.00 ATOM 64 CB ARG 5 -1.385 -8.012 4.276 1.00 0.00 ATOM 67 CG ARG 5 -2.860 -8.173 3.904 1.00 0.00 ATOM 70 CD ARG 5 -3.643 -8.837 5.048 1.00 0.00 ATOM 73 NE ARG 5 -4.972 -9.280 4.591 1.00 0.00 ATOM 75 CZ ARG 5 -5.177 -10.322 3.807 1.00 0.00 ATOM 76 NH1 ARG 5 -6.341 -10.562 3.281 1.00 0.00 ATOM 79 NH2 ARG 5 -4.223 -11.131 3.459 1.00 0.00 ATOM 82 C ARG 5 0.694 -6.715 3.774 1.00 0.00 ATOM 83 O ARG 5 0.739 -5.531 4.129 1.00 0.00 ATOM 84 N LYS 6 1.760 -7.525 3.853 1.00 0.00 ATOM 86 CA LYS 6 3.092 -7.075 4.295 1.00 0.00 ATOM 88 CB LYS 6 4.086 -8.249 4.311 1.00 0.00 ATOM 91 CG LYS 6 5.410 -7.855 4.998 1.00 0.00 ATOM 94 CD LYS 6 6.545 -8.827 4.658 1.00 0.00 ATOM 97 CE LYS 6 7.077 -8.556 3.245 1.00 0.00 ATOM 100 NZ LYS 6 7.792 -9.740 2.720 1.00 0.00 ATOM 104 C LYS 6 3.601 -5.943 3.410 1.00 0.00 ATOM 105 O LYS 6 3.907 -4.872 3.940 1.00 0.00 ATOM 106 N LYS 7 3.600 -6.132 2.082 1.00 0.00 ATOM 108 CA LYS 7 4.034 -5.063 1.165 1.00 0.00 ATOM 110 CB LYS 7 4.073 -5.549 -0.290 1.00 0.00 ATOM 113 CG LYS 7 5.258 -6.498 -0.476 1.00 0.00 ATOM 116 CD LYS 7 5.329 -7.061 -1.902 1.00 0.00 ATOM 119 CE LYS 7 6.138 -8.359 -1.885 1.00 0.00 ATOM 122 NZ LYS 7 5.337 -9.446 -1.277 1.00 0.00 ATOM 126 C LYS 7 3.190 -3.784 1.295 1.00 0.00 ATOM 127 O LYS 7 3.757 -2.693 1.330 1.00 0.00 ATOM 128 N CYS 8 1.862 -3.886 1.448 1.00 0.00 ATOM 130 CA CYS 8 1.003 -2.724 1.730 1.00 0.00 ATOM 132 CB CYS 8 -0.470 -3.142 1.918 1.00 0.00 ATOM 135 SG CYS 8 -1.380 -3.898 0.545 1.00 0.00 ATOM 137 C CYS 8 1.438 -1.976 2.994 1.00 0.00 ATOM 138 O CYS 8 1.480 -0.748 3.001 1.00 0.00 ATOM 139 N THR 9 1.789 -2.695 4.064 1.00 0.00 ATOM 141 CA THR 9 2.170 -2.097 5.358 1.00 0.00 ATOM 143 CB THR 9 2.170 -3.173 6.455 1.00 0.00 ATOM 145 CG2 THR 9 2.357 -2.591 7.859 1.00 0.00 ATOM 149 OG1 THR 9 0.936 -3.846 6.472 1.00 0.00 ATOM 151 C THR 9 3.547 -1.421 5.336 1.00 0.00 ATOM 152 O THR 9 3.743 -0.335 5.896 1.00 0.00 ATOM 153 N GLU 10 4.509 -2.046 4.651 1.00 0.00 ATOM 155 CA GLU 10 5.797 -1.440 4.332 1.00 0.00 ATOM 157 CB GLU 10 6.587 -2.349 3.380 1.00 0.00 ATOM 160 CG GLU 10 7.156 -3.682 3.879 1.00 0.00 ATOM 163 CD GLU 10 7.819 -4.394 2.682 1.00 0.00 ATOM 164 OE1 GLU 10 7.486 -5.574 2.420 1.00 0.00 ATOM 165 OE2 GLU 10 8.617 -3.696 2.004 1.00 0.00 ATOM 166 C GLU 10 5.614 -0.113 3.600 1.00 0.00 ATOM 167 O GLU 10 6.155 0.907 4.027 1.00 0.00 ATOM 168 N MET 11 4.859 -0.120 2.495 1.00 0.00 ATOM 170 CA MET 11 4.733 1.057 1.643 1.00 0.00 ATOM 172 CB MET 11 4.183 0.675 0.265 1.00 0.00 ATOM 175 CG MET 11 5.112 -0.307 -0.479 1.00 0.00 ATOM 178 SD MET 11 6.871 0.121 -0.674 1.00 0.00 ATOM 179 CE MET 11 6.774 1.786 -1.378 1.00 0.00 ATOM 183 C MET 11 3.938 2.179 2.325 1.00 0.00 ATOM 184 O MET 11 4.322 3.343 2.213 1.00 0.00 ATOM 185 N LYS 12 2.927 1.844 3.138 1.00 0.00 ATOM 187 CA LYS 12 2.267 2.753 4.094 1.00 0.00 ATOM 189 CB LYS 12 1.249 1.920 4.909 1.00 0.00 ATOM 192 CG LYS 12 0.584 2.552 6.142 1.00 0.00 ATOM 195 CD LYS 12 -0.313 3.771 5.888 1.00 0.00 ATOM 198 CE LYS 12 0.500 5.069 5.892 1.00 0.00 ATOM 201 NZ LYS 12 -0.352 6.265 6.014 1.00 0.00 ATOM 205 C LYS 12 3.280 3.458 4.976 1.00 0.00 ATOM 206 O LYS 12 3.289 4.687 5.013 1.00 0.00 ATOM 207 N LYS 13 4.151 2.710 5.663 1.00 0.00 ATOM 209 CA LYS 13 5.165 3.330 6.531 1.00 0.00 ATOM 211 CB LYS 13 5.918 2.255 7.330 1.00 0.00 ATOM 214 CG LYS 13 4.996 1.644 8.400 1.00 0.00 ATOM 217 CD LYS 13 5.681 0.529 9.193 1.00 0.00 ATOM 220 CE LYS 13 4.676 -0.059 10.187 1.00 0.00 ATOM 223 NZ LYS 13 5.295 -1.075 11.074 1.00 0.00 ATOM 227 C LYS 13 6.108 4.258 5.747 1.00 0.00 ATOM 228 O LYS 13 6.200 5.435 6.074 1.00 0.00 ATOM 229 N LYS 14 6.726 3.759 4.671 1.00 0.00 ATOM 231 CA LYS 14 7.671 4.493 3.803 1.00 0.00 ATOM 233 CB LYS 14 8.133 3.559 2.660 1.00 0.00 ATOM 236 CG LYS 14 8.940 2.312 3.090 1.00 0.00 ATOM 239 CD LYS 14 8.933 1.259 1.962 1.00 0.00 ATOM 242 CE LYS 14 9.498 -0.107 2.373 1.00 0.00 ATOM 245 NZ LYS 14 9.261 -1.142 1.323 1.00 0.00 ATOM 249 C LYS 14 7.100 5.776 3.188 1.00 0.00 ATOM 250 O LYS 14 7.843 6.721 2.947 1.00 0.00 ATOM 251 N PHE 15 5.788 5.825 2.968 1.00 0.00 ATOM 253 CA PHE 15 5.092 6.968 2.386 1.00 0.00 ATOM 255 CB PHE 15 4.430 6.557 1.061 1.00 0.00 ATOM 258 CG PHE 15 5.362 6.114 -0.062 1.00 0.00 ATOM 259 CD1 PHE 15 4.927 5.119 -0.960 1.00 0.00 ATOM 261 CE1 PHE 15 5.709 4.771 -2.075 1.00 0.00 ATOM 263 CZ PHE 15 6.958 5.382 -2.276 1.00 0.00 ATOM 265 CE2 PHE 15 7.414 6.354 -1.371 1.00 0.00 ATOM 267 CD2 PHE 15 6.612 6.731 -0.279 1.00 0.00 ATOM 269 C PHE 15 4.151 7.670 3.364 1.00 0.00 ATOM 270 O PHE 15 3.342 8.489 2.930 1.00 0.00 ATOM 271 N LYS 16 4.387 7.493 4.676 1.00 0.00 ATOM 273 CA LYS 16 4.030 8.447 5.741 1.00 0.00 ATOM 275 CB LYS 16 5.115 9.575 5.811 1.00 0.00 ATOM 278 CG LYS 16 5.777 10.162 4.520 1.00 0.00 ATOM 281 CD LYS 16 4.969 11.110 3.591 1.00 0.00 ATOM 284 CE LYS 16 5.634 11.324 2.216 1.00 0.00 ATOM 287 NZ LYS 16 4.635 11.422 1.114 1.00 0.00 ATOM 291 C LYS 16 2.572 8.929 5.625 1.00 0.00 ATOM 292 O LYS 16 1.628 8.183 5.894 1.00 0.00 ATOM 293 N ASN 17 2.383 10.168 5.196 1.00 0.00 ATOM 295 CA ASN 17 1.108 10.777 4.851 1.00 0.00 ATOM 297 CB ASN 17 1.248 12.308 4.978 1.00 0.00 ATOM 300 CG ASN 17 -0.069 12.912 5.420 1.00 0.00 ATOM 301 OD1 ASN 17 -0.353 12.990 6.597 1.00 0.00 ATOM 302 ND2 ASN 17 -0.934 13.301 4.517 1.00 0.00 ATOM 305 C ASN 17 0.505 10.330 3.499 1.00 0.00 ATOM 306 O ASN 17 0.368 11.099 2.534 1.00 0.00 ATOM 307 N CYS 18 0.124 9.053 3.458 1.00 0.00 ATOM 309 CA CYS 18 -0.616 8.446 2.362 1.00 0.00 ATOM 311 CB CYS 18 0.346 7.576 1.536 1.00 0.00 ATOM 314 SG CYS 18 0.935 6.146 2.492 1.00 0.00 ATOM 316 C CYS 18 -1.847 7.639 2.805 1.00 0.00 ATOM 317 O CYS 18 -1.863 7.000 3.863 1.00 0.00 ATOM 318 N GLU 19 -2.863 7.600 1.953 1.00 0.00 ATOM 320 CA GLU 19 -3.749 6.446 1.809 1.00 0.00 ATOM 322 CB GLU 19 -4.934 6.870 0.908 1.00 0.00 ATOM 325 CG GLU 19 -5.736 5.710 0.287 1.00 0.00 ATOM 328 CD GLU 19 -6.796 6.158 -0.723 1.00 0.00 ATOM 329 OE1 GLU 19 -6.754 5.675 -1.881 1.00 0.00 ATOM 330 OE2 GLU 19 -7.780 6.821 -0.328 1.00 0.00 ATOM 331 C GLU 19 -2.993 5.271 1.187 1.00 0.00 ATOM 332 O GLU 19 -2.170 5.444 0.285 1.00 0.00 ATOM 333 N VAL 20 -3.394 4.064 1.591 1.00 0.00 ATOM 335 CA VAL 20 -3.042 2.802 0.937 1.00 0.00 ATOM 337 CB VAL 20 -1.954 2.067 1.754 1.00 0.00 ATOM 339 CG1 VAL 20 -1.605 0.688 1.182 1.00 0.00 ATOM 343 CG2 VAL 20 -0.656 2.876 1.795 1.00 0.00 ATOM 347 C VAL 20 -4.293 1.944 0.853 1.00 0.00 ATOM 348 O VAL 20 -4.969 1.720 1.862 1.00 0.00 ATOM 349 N ARG 21 -4.587 1.439 -0.340 1.00 0.00 ATOM 351 CA ARG 21 -5.678 0.509 -0.624 1.00 0.00 ATOM 353 CB ARG 21 -6.791 1.176 -1.456 1.00 0.00 ATOM 356 CG ARG 21 -7.473 2.345 -0.732 1.00 0.00 ATOM 359 CD ARG 21 -8.647 2.881 -1.557 1.00 0.00 ATOM 362 NE ARG 21 -9.097 4.185 -1.042 1.00 0.00 ATOM 364 CZ ARG 21 -10.038 4.464 -0.163 1.00 0.00 ATOM 365 NH1 ARG 21 -10.137 5.671 0.301 1.00 0.00 ATOM 368 NH2 ARG 21 -10.875 3.564 0.281 1.00 0.00 ATOM 371 C ARG 21 -5.096 -0.692 -1.359 1.00 0.00 ATOM 372 O ARG 21 -4.854 -0.621 -2.560 1.00 0.00 ATOM 373 N CYS 22 -4.836 -1.786 -0.636 1.00 0.00 ATOM 375 CA CYS 22 -4.653 -3.090 -1.281 1.00 0.00 ATOM 377 CB CYS 22 -4.410 -4.184 -0.224 1.00 0.00 ATOM 380 SG CYS 22 -3.316 -3.827 1.194 1.00 0.00 ATOM 382 C CYS 22 -5.917 -3.421 -2.107 1.00 0.00 ATOM 383 O CYS 22 -6.996 -2.978 -1.698 1.00 0.00 ATOM 384 N ASP 23 -5.855 -4.291 -3.117 1.00 0.00 ATOM 386 CA ASP 23 -6.968 -5.232 -3.233 1.00 0.00 ATOM 388 CB ASP 23 -7.930 -4.958 -4.390 1.00 0.00 ATOM 391 CG ASP 23 -9.036 -6.019 -4.375 1.00 0.00 ATOM 392 OD1 ASP 23 -9.236 -6.678 -5.415 1.00 0.00 ATOM 393 OD2 ASP 23 -9.599 -6.258 -3.285 1.00 0.00 ATOM 394 C ASP 23 -6.477 -6.682 -3.172 1.00 0.00 ATOM 395 O ASP 23 -5.578 -7.140 -3.872 1.00 0.00 ATOM 396 N GLU 24 -7.077 -7.413 -2.243 1.00 0.00 ATOM 398 CA GLU 24 -6.670 -8.764 -1.880 1.00 0.00 ATOM 400 CB GLU 24 -7.074 -9.013 -0.417 1.00 0.00 ATOM 403 CG GLU 24 -5.914 -8.649 0.519 1.00 0.00 ATOM 406 CD GLU 24 -4.834 -9.742 0.555 1.00 0.00 ATOM 407 OE1 GLU 24 -3.629 -9.398 0.545 1.00 0.00 ATOM 408 OE2 GLU 24 -5.198 -10.926 0.760 1.00 0.00 ATOM 409 C GLU 24 -7.212 -9.845 -2.822 1.00 0.00 ATOM 410 O GLU 24 -6.916 -11.022 -2.637 1.00 0.00 ATOM 411 N SER 25 -7.946 -9.478 -3.880 1.00 0.00 ATOM 413 CA SER 25 -8.340 -10.426 -4.929 1.00 0.00 ATOM 415 CB SER 25 -9.365 -9.799 -5.877 1.00 0.00 ATOM 418 OG SER 25 -8.763 -8.817 -6.687 1.00 0.00 ATOM 420 C SER 25 -7.186 -11.028 -5.747 1.00 0.00 ATOM 421 O SER 25 -7.426 -11.924 -6.561 1.00 0.00 ATOM 422 N ASN 26 -5.967 -10.526 -5.514 1.00 0.00 ATOM 424 CA ASN 26 -4.686 -10.622 -6.236 1.00 0.00 ATOM 426 CB ASN 26 -4.539 -11.831 -7.182 1.00 0.00 ATOM 429 CG ASN 26 -4.365 -13.123 -6.403 1.00 0.00 ATOM 430 OD1 ASN 26 -3.269 -13.487 -6.007 1.00 0.00 ATOM 431 ND2 ASN 26 -5.428 -13.831 -6.123 1.00 0.00 ATOM 434 C ASN 26 -4.333 -9.262 -6.895 1.00 0.00 ATOM 435 O ASN 26 -3.353 -9.153 -7.629 1.00 0.00 ATOM 436 N HIS 27 -5.118 -8.214 -6.623 1.00 0.00 ATOM 438 CA HIS 27 -5.087 -6.938 -7.325 1.00 0.00 ATOM 440 CB HIS 27 -6.485 -6.577 -7.839 1.00 0.00 ATOM 443 CG HIS 27 -6.481 -5.343 -8.707 1.00 0.00 ATOM 444 ND1 HIS 27 -5.846 -5.227 -9.946 1.00 0.00 ATOM 445 CE1 HIS 27 -6.049 -3.962 -10.342 1.00 0.00 ATOM 447 NE2 HIS 27 -6.752 -3.284 -9.419 1.00 0.00 ATOM 449 CD2 HIS 27 -7.032 -4.139 -8.378 1.00 0.00 ATOM 451 C HIS 27 -4.408 -5.813 -6.534 1.00 0.00 ATOM 452 O HIS 27 -5.015 -4.868 -6.030 1.00 0.00 ATOM 453 N CYS 28 -3.078 -5.897 -6.569 1.00 0.00 ATOM 455 CA CYS 28 -2.169 -4.774 -6.358 1.00 0.00 ATOM 457 CB CYS 28 -2.191 -3.919 -7.655 1.00 0.00 ATOM 460 SG CYS 28 -3.515 -2.666 -7.685 1.00 0.00 ATOM 462 C CYS 28 -2.381 -3.994 -5.048 1.00 0.00 ATOM 463 O CYS 28 -2.988 -4.434 -4.068 1.00 0.00 ATOM 464 N VAL 29 -1.775 -2.815 -5.035 1.00 0.00 ATOM 466 CA VAL 29 -1.953 -1.781 -4.035 1.00 0.00 ATOM 468 CB VAL 29 -0.796 -1.780 -3.011 1.00 0.00 ATOM 470 CG1 VAL 29 -1.191 -0.986 -1.769 1.00 0.00 ATOM 474 CG2 VAL 29 -0.343 -3.171 -2.555 1.00 0.00 ATOM 478 C VAL 29 -1.978 -0.444 -4.761 1.00 0.00 ATOM 479 O VAL 29 -0.978 -0.043 -5.358 1.00 0.00 ATOM 480 N GLU 30 -3.078 0.292 -4.712 1.00 0.00 ATOM 482 CA GLU 30 -3.014 1.727 -4.946 1.00 0.00 ATOM 484 CB GLU 30 -4.396 2.313 -5.262 1.00 0.00 ATOM 487 CG GLU 30 -4.983 1.841 -6.597 1.00 0.00 ATOM 490 CD GLU 30 -6.040 2.843 -7.064 1.00 0.00 ATOM 491 OE1 GLU 30 -7.050 3.042 -6.352 1.00 0.00 ATOM 492 OE2 GLU 30 -5.788 3.542 -8.073 1.00 0.00 ATOM 493 C GLU 30 -2.474 2.450 -3.712 1.00 0.00 ATOM 494 O GLU 30 -2.791 2.102 -2.577 1.00 0.00 ATOM 495 N VAL 31 -1.700 3.508 -3.930 1.00 0.00 ATOM 497 CA VAL 31 -1.162 4.321 -2.844 1.00 0.00 ATOM 499 CB VAL 31 0.313 3.971 -2.549 1.00 0.00 ATOM 501 CG1 VAL 31 0.867 4.860 -1.432 1.00 0.00 ATOM 505 CG2 VAL 31 0.497 2.499 -2.150 1.00 0.00 ATOM 509 C VAL 31 -1.307 5.795 -3.208 1.00 0.00 ATOM 510 O VAL 31 -0.606 6.304 -4.090 1.00 0.00 ATOM 511 N ARG 32 -2.232 6.488 -2.547 1.00 0.00 ATOM 513 CA ARG 32 -2.502 7.912 -2.782 1.00 0.00 ATOM 515 CB ARG 32 -4.012 8.204 -2.839 1.00 0.00 ATOM 518 CG ARG 32 -4.691 7.658 -4.098 1.00 0.00 ATOM 521 CD ARG 32 -6.193 7.986 -4.097 1.00 0.00 ATOM 524 NE ARG 32 -6.888 7.389 -5.255 1.00 0.00 ATOM 526 CZ ARG 32 -7.077 6.098 -5.484 1.00 0.00 ATOM 527 NH1 ARG 32 -7.520 5.704 -6.640 1.00 0.00 ATOM 530 NH2 ARG 32 -6.817 5.165 -4.620 1.00 0.00 ATOM 533 C ARG 32 -1.804 8.744 -1.691 1.00 0.00 ATOM 534 O ARG 32 -2.354 8.978 -0.616 1.00 0.00 ATOM 535 N CYS 33 -0.571 9.158 -1.951 1.00 0.00 ATOM 537 CA CYS 33 0.186 10.098 -1.130 1.00 0.00 ATOM 539 CB CYS 33 1.660 10.022 -1.544 1.00 0.00 ATOM 542 SG CYS 33 2.299 8.329 -1.434 1.00 0.00 ATOM 544 C CYS 33 -0.307 11.532 -1.304 1.00 0.00 ATOM 545 O CYS 33 -0.642 11.922 -2.422 1.00 0.00 ATOM 546 N SER 34 -0.253 12.355 -0.248 1.00 0.00 ATOM 548 CA SER 34 -0.557 13.805 -0.332 1.00 0.00 ATOM 550 CB SER 34 -0.767 14.358 1.080 1.00 0.00 ATOM 553 OG SER 34 -1.718 13.558 1.764 1.00 0.00 ATOM 555 C SER 34 0.503 14.641 -1.093 1.00 0.00 ATOM 556 O SER 34 0.895 15.717 -0.656 1.00 0.00 ATOM 557 N ASP 35 0.980 14.100 -2.217 1.00 0.00 ATOM 559 CA ASP 35 2.160 14.472 -3.004 1.00 0.00 ATOM 561 CB ASP 35 3.427 14.418 -2.105 1.00 0.00 ATOM 564 CG ASP 35 3.617 13.146 -1.255 1.00 0.00 ATOM 565 OD1 ASP 35 2.892 12.933 -0.253 1.00 0.00 ATOM 566 OD2 ASP 35 4.577 12.372 -1.477 1.00 0.00 ATOM 567 C ASP 35 2.349 13.581 -4.252 1.00 0.00 ATOM 568 O ASP 35 3.067 13.986 -5.163 1.00 0.00 ATOM 569 N THR 36 1.718 12.393 -4.346 1.00 0.00 ATOM 571 CA THR 36 1.860 11.501 -5.522 1.00 0.00 ATOM 573 CB THR 36 3.285 10.911 -5.629 1.00 0.00 ATOM 575 CG2 THR 36 3.644 9.864 -4.575 1.00 0.00 ATOM 579 OG1 THR 36 3.460 10.322 -6.898 1.00 0.00 ATOM 581 C THR 36 0.789 10.411 -5.592 1.00 0.00 ATOM 582 O THR 36 0.058 10.189 -4.632 1.00 0.00 ATOM 583 N LYS 37 0.694 9.663 -6.690 1.00 0.00 ATOM 585 CA LYS 37 -0.178 8.487 -6.783 1.00 0.00 ATOM 587 CB LYS 37 -1.473 8.839 -7.542 1.00 0.00 ATOM 590 CG LYS 37 -2.560 7.759 -7.416 1.00 0.00 ATOM 593 CD LYS 37 -2.417 6.586 -8.395 1.00 0.00 ATOM 596 CE LYS 37 -3.567 5.610 -8.172 1.00 0.00 ATOM 599 NZ LYS 37 -3.481 4.437 -9.066 1.00 0.00 ATOM 603 C LYS 37 0.603 7.332 -7.376 1.00 0.00 ATOM 604 O LYS 37 0.699 7.169 -8.592 1.00 0.00 ATOM 605 N TYR 38 1.156 6.520 -6.487 1.00 0.00 ATOM 607 CA TYR 38 1.699 5.223 -6.845 1.00 0.00 ATOM 609 CB TYR 38 2.581 4.688 -5.692 1.00 0.00 ATOM 612 CG TYR 38 4.062 4.698 -5.998 1.00 0.00 ATOM 613 CD1 TYR 38 4.903 5.656 -5.400 1.00 0.00 ATOM 615 CE1 TYR 38 6.277 5.679 -5.711 1.00 0.00 ATOM 617 CZ TYR 38 6.810 4.745 -6.624 1.00 0.00 ATOM 618 OH TYR 38 8.133 4.782 -6.929 1.00 0.00 ATOM 620 CE2 TYR 38 5.972 3.774 -7.209 1.00 0.00 ATOM 622 CD2 TYR 38 4.600 3.750 -6.891 1.00 0.00 ATOM 624 C TYR 38 0.561 4.229 -7.145 1.00 0.00 ATOM 625 O TYR 38 -0.526 4.268 -6.572 1.00 0.00 ATOM 626 N THR 39 0.892 3.236 -7.960 1.00 0.00 ATOM 628 CA THR 39 0.351 1.884 -7.811 1.00 0.00 ATOM 630 CB THR 39 -0.611 1.527 -8.956 1.00 0.00 ATOM 632 CG2 THR 39 -0.928 0.036 -9.087 1.00 0.00 ATOM 636 OG1 THR 39 -1.871 2.123 -8.731 1.00 0.00 ATOM 638 C THR 39 1.559 0.954 -7.767 1.00 0.00 ATOM 639 O THR 39 2.556 1.201 -8.446 1.00 0.00 ATOM 640 N LEU 40 1.489 -0.092 -6.953 1.00 0.00 ATOM 642 CA LEU 40 2.530 -1.096 -6.765 1.00 0.00 ATOM 644 CB LEU 40 3.520 -0.634 -5.675 1.00 0.00 ATOM 647 CG LEU 40 2.927 -0.328 -4.287 1.00 0.00 ATOM 649 CD1 LEU 40 2.927 -1.565 -3.382 1.00 0.00 ATOM 653 CD2 LEU 40 3.754 0.768 -3.619 1.00 0.00 ATOM 657 C LEU 40 1.912 -2.482 -6.585 1.00 0.00 ATOM 658 O LEU 40 0.692 -2.606 -6.636 1.00 0.00 ATOM 659 N CYS 41 2.707 -3.546 -6.471 1.00 0.00 ATOM 661 CA CYS 41 2.220 -4.925 -6.647 1.00 0.00 ATOM 663 CB CYS 41 1.513 -5.410 -5.369 1.00 0.00 ATOM 666 SG CYS 41 2.641 -5.437 -3.948 1.00 0.00 ATOM 668 C CYS 41 1.347 -5.089 -7.904 1.00 0.00 ATOM 669 O CYS 41 1.084 -4.167 -8.677 1.00 0.00 ATOM 670 OXT CYS 41 0.919 -6.194 -8.226 1.00 0.00 TER END