####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS214_5 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS214_5.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 1.87 1.87 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 1.87 1.87 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 2 - 17 0.94 3.11 LONGEST_CONTINUOUS_SEGMENT: 16 4 - 19 0.99 2.71 LONGEST_CONTINUOUS_SEGMENT: 16 5 - 20 0.99 2.63 LONGEST_CONTINUOUS_SEGMENT: 16 18 - 33 0.87 2.09 LCS_AVERAGE: 36.05 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 41 41 3 3 7 8 13 34 38 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Q 2 Q 2 16 41 41 9 13 16 24 30 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 3 E 3 16 41 41 9 13 16 24 33 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 4 T 4 16 41 41 9 13 16 27 35 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 5 R 5 16 41 41 10 13 25 34 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 6 K 6 16 41 41 10 13 25 34 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 7 K 7 16 41 41 10 13 24 34 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 8 C 8 16 41 41 10 13 27 34 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 9 T 9 16 41 41 10 19 27 34 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 10 E 10 16 41 41 10 19 27 34 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT M 11 M 11 16 41 41 10 14 27 34 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 12 K 12 16 41 41 10 14 27 34 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 13 K 13 16 41 41 10 19 27 34 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 14 K 14 16 41 41 10 15 27 34 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT F 15 F 15 16 41 41 5 14 27 34 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 16 K 16 16 41 41 3 7 15 29 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 17 N 17 16 41 41 4 12 26 34 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 18 C 18 16 41 41 5 19 27 34 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 19 E 19 16 41 41 4 19 27 34 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 20 V 20 16 41 41 6 17 27 34 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 21 R 21 16 41 41 4 19 27 34 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 22 C 22 16 41 41 4 19 27 34 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 23 D 23 16 41 41 5 19 27 34 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 24 E 24 16 41 41 7 19 27 34 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 25 S 25 16 41 41 7 19 27 34 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 26 N 26 16 41 41 3 15 25 34 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT H 27 H 27 16 41 41 4 16 27 34 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 28 C 28 16 41 41 4 18 27 34 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 29 V 29 16 41 41 7 19 27 34 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 30 E 30 16 41 41 5 19 27 34 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 31 V 31 16 41 41 6 19 27 34 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 32 R 32 16 41 41 7 19 27 34 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 33 C 33 16 41 41 5 19 27 34 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 34 S 34 12 41 41 3 7 23 31 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 35 D 35 12 41 41 3 15 24 31 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 36 T 36 12 41 41 3 19 27 34 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 37 K 37 12 41 41 7 19 27 34 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Y 38 Y 38 12 41 41 7 19 27 34 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 39 T 39 12 41 41 6 19 27 34 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT L 40 L 40 12 41 41 6 19 27 34 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 41 C 41 7 41 41 4 18 26 34 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_AVERAGE LCS_A: 78.68 ( 36.05 100.00 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 19 27 34 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 41 GDT PERCENT_AT 24.39 46.34 65.85 82.93 90.24 92.68 97.56 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.23 0.66 0.93 1.26 1.44 1.52 1.74 1.87 1.87 1.87 1.87 1.87 1.87 1.87 1.87 1.87 1.87 1.87 1.87 1.87 GDT RMS_ALL_AT 4.05 2.25 2.26 2.00 2.01 1.97 1.88 1.87 1.87 1.87 1.87 1.87 1.87 1.87 1.87 1.87 1.87 1.87 1.87 1.87 # Checking swapping # possible swapping detected: E 3 E 3 # possible swapping detected: E 10 E 10 # possible swapping detected: D 23 D 23 # possible swapping detected: E 24 E 24 # possible swapping detected: E 30 E 30 # possible swapping detected: D 35 D 35 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 4.457 0 0.172 0.812 7.120 4.545 4.242 4.708 LGA Q 2 Q 2 3.560 0 0.214 1.390 3.808 16.818 17.980 2.830 LGA E 3 E 3 3.392 0 0.037 1.493 8.950 22.727 10.707 7.845 LGA T 4 T 4 2.647 0 0.032 1.114 4.668 32.727 34.545 4.668 LGA R 5 R 5 1.275 0 0.040 1.401 9.578 70.000 34.050 9.578 LGA K 6 K 6 1.189 0 0.013 1.262 7.907 69.545 37.778 7.849 LGA K 7 K 7 1.680 0 0.070 0.728 2.346 50.909 57.576 0.441 LGA C 8 C 8 1.509 0 0.052 0.765 4.459 61.818 53.030 4.459 LGA T 9 T 9 0.743 0 0.028 0.081 1.105 77.727 84.675 0.311 LGA E 10 E 10 0.421 0 0.043 0.966 5.154 82.273 49.293 5.035 LGA M 11 M 11 1.565 0 0.068 0.198 2.548 54.545 48.182 2.548 LGA K 12 K 12 1.828 0 0.047 0.784 4.467 47.727 44.646 4.467 LGA K 13 K 13 1.542 0 0.055 0.628 1.835 50.909 60.808 1.191 LGA K 14 K 14 1.738 0 0.076 0.672 4.487 50.909 43.030 4.487 LGA F 15 F 15 1.598 0 0.057 0.436 3.232 62.273 50.413 2.844 LGA K 16 K 16 2.690 0 0.036 1.246 7.638 32.727 17.980 7.638 LGA N 17 N 17 1.796 0 0.253 0.497 3.329 51.364 43.864 2.054 LGA C 18 C 18 0.396 0 0.021 0.100 0.949 100.000 93.939 0.949 LGA E 19 E 19 0.944 0 0.298 0.794 4.492 81.818 48.081 4.492 LGA V 20 V 20 1.655 0 0.167 1.125 3.716 51.364 45.455 1.908 LGA R 21 R 21 1.494 0 0.011 1.288 3.459 65.455 46.942 3.459 LGA C 22 C 22 1.641 0 0.100 0.862 4.479 50.909 43.333 4.479 LGA D 23 D 23 1.677 0 0.309 1.062 4.418 36.364 30.909 3.316 LGA E 24 E 24 1.396 0 0.084 0.562 3.653 65.455 42.020 3.098 LGA S 25 S 25 1.852 0 0.077 0.109 2.477 50.909 46.667 2.477 LGA N 26 N 26 2.198 0 0.085 0.208 3.576 44.545 35.227 2.039 LGA H 27 H 27 0.949 0 0.038 0.250 1.787 73.636 72.364 1.301 LGA C 28 C 28 0.680 0 0.165 0.225 1.043 77.727 79.091 0.819 LGA V 29 V 29 0.832 0 0.056 0.088 1.346 77.727 72.468 1.327 LGA E 30 E 30 1.034 0 0.058 0.545 2.354 69.545 57.980 2.354 LGA V 31 V 31 1.007 0 0.107 0.150 1.356 65.455 65.455 1.121 LGA R 32 R 32 1.106 0 0.081 1.162 5.312 77.727 43.471 5.312 LGA C 33 C 33 0.260 0 0.483 0.573 1.879 83.182 80.000 1.046 LGA S 34 S 34 2.798 0 0.549 0.813 5.130 20.909 23.333 2.406 LGA D 35 D 35 2.999 0 0.205 1.031 6.356 25.000 16.136 6.356 LGA T 36 T 36 2.211 0 0.238 1.133 2.863 41.364 38.442 2.292 LGA K 37 K 37 1.150 0 0.079 1.266 3.998 61.818 54.141 3.998 LGA Y 38 Y 38 1.275 0 0.024 1.313 5.166 65.455 41.515 5.166 LGA T 39 T 39 1.466 0 0.101 0.101 2.166 55.000 51.429 1.803 LGA L 40 L 40 1.489 0 0.177 1.016 3.558 61.818 46.818 2.334 LGA C 41 C 41 1.673 0 0.456 1.120 2.720 50.909 45.714 2.302 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 1.868 1.938 2.742 55.942 46.676 31.131 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 41 1.87 82.317 90.789 2.083 LGA_LOCAL RMSD: 1.868 Number of atoms: 41 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 1.868 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 1.868 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.762878 * X + -0.282483 * Y + -0.581568 * Z + 4.587335 Y_new = 0.598364 * X + -0.649199 * Y + -0.469577 * Z + -0.399136 Z_new = -0.244906 * X + -0.706219 * Y + 0.664286 * Z + 4.765564 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.476467 0.247423 -0.815985 [DEG: 141.8911 14.1763 -46.7525 ] ZXZ: -0.891540 0.844258 -2.807785 [DEG: -51.0815 48.3724 -160.8742 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS214_5 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS214_5.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 41 1.87 90.789 1.87 REMARK ---------------------------------------------------------- MOLECULE T0955TS214_5 PFRMAT TS TARGET T0955 MODEL 5 PARENT N/A ATOM 1 N SER 1 -4.684 -13.339 2.402 1.00 3.68 ATOM 2 CA SER 1 -3.241 -13.497 2.252 1.00 3.68 ATOM 3 C SER 1 -2.443 -12.646 3.219 1.00 3.68 ATOM 4 O SER 1 -2.226 -11.452 2.986 1.00 3.68 ATOM 5 CB SER 1 -2.808 -13.127 0.849 1.00 3.68 ATOM 6 OG SER 1 -1.393 -13.183 0.723 1.00 3.68 ATOM 14 N GLN 2 -1.913 -13.272 4.266 1.00 3.04 ATOM 15 CA GLN 2 -1.125 -12.507 5.223 1.00 3.04 ATOM 16 C GLN 2 0.154 -11.975 4.596 1.00 3.04 ATOM 17 O GLN 2 0.593 -10.875 4.928 1.00 3.04 ATOM 18 CB GLN 2 -0.797 -13.342 6.457 1.00 3.04 ATOM 19 CG GLN 2 -2.003 -13.643 7.329 1.00 3.04 ATOM 20 CD GLN 2 -2.628 -12.358 7.851 1.00 3.04 ATOM 21 OE1 GLN 2 -1.903 -11.455 8.303 1.00 3.04 ATOM 22 NE2 GLN 2 -3.958 -12.267 7.803 1.00 3.04 ATOM 31 N GLU 3 0.737 -12.724 3.664 1.00 2.71 ATOM 32 CA GLU 3 1.971 -12.257 3.054 1.00 2.71 ATOM 33 C GLU 3 1.696 -11.020 2.196 1.00 2.71 ATOM 34 O GLU 3 2.512 -10.090 2.162 1.00 2.71 ATOM 35 CB GLU 3 2.632 -13.372 2.247 1.00 2.71 ATOM 36 CG GLU 3 3.147 -14.541 3.120 1.00 2.71 ATOM 37 CD GLU 3 4.195 -14.131 4.156 1.00 2.71 ATOM 38 OE1 GLU 3 5.169 -13.520 3.795 1.00 2.71 ATOM 39 OE2 GLU 3 3.997 -14.429 5.323 1.00 2.71 ATOM 46 N THR 4 0.529 -10.977 1.530 1.00 2.21 ATOM 47 CA THR 4 0.198 -9.800 0.743 1.00 2.21 ATOM 48 C THR 4 0.020 -8.627 1.690 1.00 2.21 ATOM 49 O THR 4 0.539 -7.540 1.436 1.00 2.21 ATOM 50 CB THR 4 -1.072 -9.997 -0.096 1.00 2.21 ATOM 51 OG1 THR 4 -0.874 -11.099 -1.009 1.00 2.21 ATOM 52 CG2 THR 4 -1.380 -8.735 -0.876 1.00 2.21 ATOM 60 N ARG 5 -0.689 -8.856 2.803 1.00 2.18 ATOM 61 CA ARG 5 -0.924 -7.805 3.782 1.00 2.18 ATOM 62 C ARG 5 0.413 -7.241 4.275 1.00 2.18 ATOM 63 O ARG 5 0.570 -6.020 4.404 1.00 2.18 ATOM 64 CB ARG 5 -1.746 -8.317 4.962 1.00 2.18 ATOM 65 CG ARG 5 -2.157 -7.234 5.976 1.00 2.18 ATOM 66 CD ARG 5 -2.986 -7.771 7.116 1.00 2.18 ATOM 67 NE ARG 5 -2.237 -8.639 8.018 1.00 2.18 ATOM 68 CZ ARG 5 -1.433 -8.220 9.008 1.00 2.18 ATOM 69 NH1 ARG 5 -1.252 -6.938 9.252 1.00 2.18 ATOM 70 NH2 ARG 5 -0.836 -9.134 9.732 1.00 2.18 ATOM 84 N LYS 6 1.389 -8.120 4.545 1.00 2.17 ATOM 85 CA LYS 6 2.694 -7.653 5.005 1.00 2.17 ATOM 86 C LYS 6 3.349 -6.771 3.949 1.00 2.17 ATOM 87 O LYS 6 3.861 -5.696 4.267 1.00 2.17 ATOM 88 CB LYS 6 3.614 -8.840 5.296 1.00 2.17 ATOM 89 CG LYS 6 3.270 -9.668 6.528 1.00 2.17 ATOM 90 CD LYS 6 4.206 -10.872 6.616 1.00 2.17 ATOM 91 CE LYS 6 3.865 -11.796 7.765 1.00 2.17 ATOM 92 NZ LYS 6 4.717 -13.028 7.739 1.00 2.17 ATOM 106 N LYS 7 3.285 -7.179 2.676 1.00 2.02 ATOM 107 CA LYS 7 3.863 -6.345 1.628 1.00 2.02 ATOM 108 C LYS 7 3.169 -4.999 1.585 1.00 2.02 ATOM 109 O LYS 7 3.823 -3.957 1.522 1.00 2.02 ATOM 110 CB LYS 7 3.780 -7.001 0.250 1.00 2.02 ATOM 111 CG LYS 7 4.394 -6.130 -0.863 1.00 2.02 ATOM 112 CD LYS 7 4.398 -6.818 -2.224 1.00 2.02 ATOM 113 CE LYS 7 4.932 -5.872 -3.310 1.00 2.02 ATOM 114 NZ LYS 7 5.007 -6.524 -4.644 1.00 2.02 ATOM 128 N CYS 8 1.841 -5.023 1.647 1.00 1.86 ATOM 129 CA CYS 8 1.054 -3.804 1.579 1.00 1.86 ATOM 130 C CYS 8 1.386 -2.872 2.738 1.00 1.86 ATOM 131 O CYS 8 1.468 -1.653 2.566 1.00 1.86 ATOM 132 CB CYS 8 -0.437 -4.132 1.604 1.00 1.86 ATOM 133 SG CYS 8 -1.062 -4.968 0.104 1.00 1.86 ATOM 138 N THR 9 1.617 -3.456 3.911 1.00 1.96 ATOM 139 CA THR 9 1.965 -2.699 5.094 1.00 1.96 ATOM 140 C THR 9 3.290 -1.982 4.862 1.00 1.96 ATOM 141 O THR 9 3.417 -0.788 5.162 1.00 1.96 ATOM 142 CB THR 9 2.082 -3.624 6.316 1.00 1.96 ATOM 143 OG1 THR 9 0.817 -4.275 6.543 1.00 1.96 ATOM 144 CG2 THR 9 2.480 -2.817 7.533 1.00 1.96 ATOM 152 N GLU 10 4.266 -2.691 4.291 1.00 1.89 ATOM 153 CA GLU 10 5.559 -2.079 4.028 1.00 1.89 ATOM 154 C GLU 10 5.413 -0.958 2.995 1.00 1.89 ATOM 155 O GLU 10 6.103 0.065 3.077 1.00 1.89 ATOM 156 CB GLU 10 6.580 -3.123 3.565 1.00 1.89 ATOM 157 CG GLU 10 6.992 -4.155 4.654 1.00 1.89 ATOM 158 CD GLU 10 7.686 -3.558 5.872 1.00 1.89 ATOM 159 OE1 GLU 10 8.641 -2.840 5.710 1.00 1.89 ATOM 160 OE2 GLU 10 7.243 -3.825 6.978 1.00 1.89 ATOM 167 N MET 11 4.505 -1.124 2.024 1.00 1.98 ATOM 168 CA MET 11 4.344 -0.068 1.038 1.00 1.98 ATOM 169 C MET 11 3.814 1.188 1.729 1.00 1.98 ATOM 170 O MET 11 4.251 2.302 1.429 1.00 1.98 ATOM 171 CB MET 11 3.361 -0.458 -0.059 1.00 1.98 ATOM 172 CG MET 11 3.778 -1.636 -0.934 1.00 1.98 ATOM 173 SD MET 11 5.346 -1.441 -1.727 1.00 1.98 ATOM 174 CE MET 11 6.307 -2.402 -0.548 1.00 1.98 ATOM 184 N LYS 12 2.910 1.001 2.698 1.00 2.01 ATOM 185 CA LYS 12 2.351 2.128 3.435 1.00 2.01 ATOM 186 C LYS 12 3.459 2.833 4.201 1.00 2.01 ATOM 187 O LYS 12 3.497 4.059 4.274 1.00 2.01 ATOM 188 CB LYS 12 1.259 1.685 4.403 1.00 2.01 ATOM 189 CG LYS 12 0.554 2.852 5.095 1.00 2.01 ATOM 190 CD LYS 12 -0.589 2.386 5.983 1.00 2.01 ATOM 191 CE LYS 12 -1.423 3.573 6.468 1.00 2.01 ATOM 192 NZ LYS 12 -0.628 4.528 7.291 1.00 2.01 ATOM 206 N LYS 13 4.370 2.050 4.786 1.00 2.07 ATOM 207 CA LYS 13 5.479 2.623 5.537 1.00 2.07 ATOM 208 C LYS 13 6.357 3.498 4.647 1.00 2.07 ATOM 209 O LYS 13 6.870 4.518 5.104 1.00 2.07 ATOM 210 CB LYS 13 6.349 1.539 6.174 1.00 2.07 ATOM 211 CG LYS 13 5.727 0.778 7.337 1.00 2.07 ATOM 212 CD LYS 13 6.705 -0.282 7.828 1.00 2.07 ATOM 213 CE LYS 13 6.160 -1.114 8.967 1.00 2.07 ATOM 214 NZ LYS 13 7.112 -2.202 9.335 1.00 2.07 ATOM 228 N LYS 14 6.540 3.105 3.376 1.00 2.19 ATOM 229 CA LYS 14 7.346 3.932 2.480 1.00 2.19 ATOM 230 C LYS 14 6.590 5.225 2.158 1.00 2.19 ATOM 231 O LYS 14 7.124 6.337 2.228 1.00 2.19 ATOM 232 CB LYS 14 7.620 3.217 1.148 1.00 2.19 ATOM 233 CG LYS 14 8.529 2.003 1.207 1.00 2.19 ATOM 234 CD LYS 14 8.753 1.442 -0.203 1.00 2.19 ATOM 235 CE LYS 14 9.589 0.176 -0.188 1.00 2.19 ATOM 236 NZ LYS 14 9.926 -0.284 -1.576 1.00 2.19 ATOM 250 N PHE 15 5.305 5.081 1.869 1.00 2.34 ATOM 251 CA PHE 15 4.458 6.203 1.497 1.00 2.34 ATOM 252 C PHE 15 3.812 6.858 2.719 1.00 2.34 ATOM 253 O PHE 15 2.596 6.850 2.921 1.00 2.34 ATOM 254 CB PHE 15 3.492 5.721 0.426 1.00 2.34 ATOM 255 CG PHE 15 4.223 5.509 -0.867 1.00 2.34 ATOM 256 CD1 PHE 15 4.696 4.279 -1.242 1.00 2.34 ATOM 257 CD2 PHE 15 4.450 6.581 -1.715 1.00 2.34 ATOM 258 CE1 PHE 15 5.390 4.125 -2.425 1.00 2.34 ATOM 259 CE2 PHE 15 5.128 6.420 -2.891 1.00 2.34 ATOM 260 CZ PHE 15 5.599 5.194 -3.249 1.00 2.34 ATOM 270 N LYS 16 4.686 7.501 3.489 1.00 2.41 ATOM 271 CA LYS 16 4.391 8.121 4.783 1.00 2.41 ATOM 272 C LYS 16 3.349 9.235 4.732 1.00 2.41 ATOM 273 O LYS 16 2.669 9.504 5.719 1.00 2.41 ATOM 274 CB LYS 16 5.681 8.694 5.365 1.00 2.41 ATOM 275 CG LYS 16 6.683 7.643 5.776 1.00 2.41 ATOM 276 CD LYS 16 7.958 8.246 6.334 1.00 2.41 ATOM 277 CE LYS 16 8.951 7.156 6.707 1.00 2.41 ATOM 278 NZ LYS 16 10.237 7.720 7.217 1.00 2.41 ATOM 292 N ASN 17 3.254 9.895 3.585 1.00 2.95 ATOM 293 CA ASN 17 2.344 11.016 3.380 1.00 2.95 ATOM 294 C ASN 17 1.132 10.599 2.554 1.00 2.95 ATOM 295 O ASN 17 0.472 11.451 1.931 1.00 2.95 ATOM 296 CB ASN 17 3.067 12.159 2.694 1.00 2.95 ATOM 297 CG ASN 17 4.145 12.774 3.558 1.00 2.95 ATOM 298 OD1 ASN 17 3.967 12.962 4.766 1.00 2.95 ATOM 299 ND2 ASN 17 5.264 13.094 2.952 1.00 2.95 ATOM 306 N CYS 18 0.863 9.286 2.502 1.00 2.51 ATOM 307 CA CYS 18 -0.211 8.806 1.652 1.00 2.51 ATOM 308 C CYS 18 -1.165 7.841 2.356 1.00 2.51 ATOM 309 O CYS 18 -0.815 7.205 3.352 1.00 2.51 ATOM 310 CB CYS 18 0.411 8.091 0.469 1.00 2.51 ATOM 311 SG CYS 18 1.797 9.017 -0.270 1.00 2.51 ATOM 316 N GLU 19 -2.364 7.693 1.794 1.00 2.55 ATOM 317 CA GLU 19 -3.333 6.698 2.249 1.00 2.55 ATOM 318 C GLU 19 -3.226 5.520 1.296 1.00 2.55 ATOM 319 O GLU 19 -2.989 5.725 0.107 1.00 2.55 ATOM 320 CB GLU 19 -4.755 7.251 2.215 1.00 2.55 ATOM 321 CG GLU 19 -5.024 8.428 3.112 1.00 2.55 ATOM 322 CD GLU 19 -6.447 8.947 2.980 1.00 2.55 ATOM 323 OE1 GLU 19 -7.203 8.415 2.175 1.00 2.55 ATOM 324 OE2 GLU 19 -6.778 9.876 3.678 1.00 2.55 ATOM 331 N VAL 20 -3.413 4.296 1.772 1.00 2.31 ATOM 332 CA VAL 20 -3.296 3.186 0.831 1.00 2.31 ATOM 333 C VAL 20 -4.457 2.202 0.865 1.00 2.31 ATOM 334 O VAL 20 -5.164 2.089 1.870 1.00 2.31 ATOM 335 CB VAL 20 -2.024 2.376 1.120 1.00 2.31 ATOM 336 CG1 VAL 20 -0.765 3.252 1.012 1.00 2.31 ATOM 337 CG2 VAL 20 -2.149 1.744 2.468 1.00 2.31 ATOM 347 N ARG 21 -4.583 1.431 -0.220 1.00 2.32 ATOM 348 CA ARG 21 -5.529 0.320 -0.286 1.00 2.32 ATOM 349 C ARG 21 -4.837 -0.929 -0.825 1.00 2.32 ATOM 350 O ARG 21 -4.202 -0.902 -1.881 1.00 2.32 ATOM 351 CB ARG 21 -6.721 0.643 -1.182 1.00 2.32 ATOM 352 CG ARG 21 -7.793 -0.463 -1.268 1.00 2.32 ATOM 353 CD ARG 21 -8.999 -0.021 -2.056 1.00 2.32 ATOM 354 NE ARG 21 -8.697 0.159 -3.481 1.00 2.32 ATOM 355 CZ ARG 21 -8.810 -0.805 -4.417 1.00 2.32 ATOM 356 NH1 ARG 21 -9.233 -2.008 -4.102 1.00 2.32 ATOM 357 NH2 ARG 21 -8.482 -0.515 -5.653 1.00 2.32 ATOM 371 N CYS 22 -4.962 -2.024 -0.085 1.00 2.49 ATOM 372 CA CYS 22 -4.350 -3.305 -0.442 1.00 2.49 ATOM 373 C CYS 22 -5.382 -4.192 -1.132 1.00 2.49 ATOM 374 O CYS 22 -6.447 -4.433 -0.558 1.00 2.49 ATOM 375 CB CYS 22 -3.842 -3.987 0.825 1.00 2.49 ATOM 376 SG CYS 22 -2.957 -5.551 0.590 1.00 2.49 ATOM 381 N ASP 23 -5.106 -4.661 -2.356 1.00 2.74 ATOM 382 CA ASP 23 -6.118 -5.456 -3.057 1.00 2.74 ATOM 383 C ASP 23 -5.588 -6.777 -3.613 1.00 2.74 ATOM 384 O ASP 23 -4.876 -6.828 -4.630 1.00 2.74 ATOM 385 CB ASP 23 -6.775 -4.619 -4.158 1.00 2.74 ATOM 386 CG ASP 23 -8.009 -5.298 -4.884 1.00 2.74 ATOM 387 OD1 ASP 23 -8.169 -6.516 -4.820 1.00 2.74 ATOM 388 OD2 ASP 23 -8.810 -4.559 -5.444 1.00 2.74 ATOM 393 N GLU 24 -6.026 -7.857 -2.961 1.00 3.13 ATOM 394 CA GLU 24 -5.632 -9.237 -3.234 1.00 3.13 ATOM 395 C GLU 24 -6.062 -9.726 -4.616 1.00 3.13 ATOM 396 O GLU 24 -5.598 -10.767 -5.074 1.00 3.13 ATOM 397 CB GLU 24 -6.169 -10.185 -2.167 1.00 3.13 ATOM 398 CG GLU 24 -5.541 -9.990 -0.806 1.00 3.13 ATOM 399 CD GLU 24 -6.003 -10.999 0.203 1.00 3.13 ATOM 400 OE1 GLU 24 -6.824 -11.820 -0.123 1.00 3.13 ATOM 401 OE2 GLU 24 -5.509 -10.966 1.312 1.00 3.13 ATOM 408 N SER 25 -6.951 -8.988 -5.294 1.00 2.92 ATOM 409 CA SER 25 -7.376 -9.370 -6.637 1.00 2.92 ATOM 410 C SER 25 -6.147 -9.479 -7.540 1.00 2.92 ATOM 411 O SER 25 -6.127 -10.266 -8.488 1.00 2.92 ATOM 412 CB SER 25 -8.309 -8.333 -7.229 1.00 2.92 ATOM 413 OG SER 25 -9.488 -8.228 -6.491 1.00 2.92 ATOM 419 N ASN 26 -5.140 -8.638 -7.270 1.00 2.85 ATOM 420 CA ASN 26 -3.902 -8.649 -8.027 1.00 2.85 ATOM 421 C ASN 26 -2.694 -8.462 -7.108 1.00 2.85 ATOM 422 O ASN 26 -1.548 -8.499 -7.554 1.00 2.85 ATOM 423 CB ASN 26 -3.975 -7.641 -9.164 1.00 2.85 ATOM 424 CG ASN 26 -4.255 -6.239 -8.708 1.00 2.85 ATOM 425 OD1 ASN 26 -4.325 -5.962 -7.511 1.00 2.85 ATOM 426 ND2 ASN 26 -4.426 -5.343 -9.653 1.00 2.85 ATOM 433 N HIS 27 -2.968 -8.371 -5.799 1.00 2.91 ATOM 434 CA HIS 27 -1.963 -8.222 -4.740 1.00 2.91 ATOM 435 C HIS 27 -1.142 -6.949 -4.906 1.00 2.91 ATOM 436 O HIS 27 0.066 -6.931 -4.656 1.00 2.91 ATOM 437 CB HIS 27 -1.048 -9.457 -4.716 1.00 2.91 ATOM 438 CG HIS 27 -1.811 -10.749 -4.538 1.00 2.91 ATOM 439 ND1 HIS 27 -2.368 -11.133 -3.332 1.00 2.91 ATOM 440 CD2 HIS 27 -2.134 -11.717 -5.425 1.00 2.91 ATOM 441 CE1 HIS 27 -3.003 -12.283 -3.491 1.00 2.91 ATOM 442 NE2 HIS 27 -2.871 -12.661 -4.749 1.00 2.91 ATOM 450 N CYS 28 -1.827 -5.884 -5.302 1.00 2.45 ATOM 451 CA CYS 28 -1.218 -4.585 -5.562 1.00 2.45 ATOM 452 C CYS 28 -1.696 -3.535 -4.559 1.00 2.45 ATOM 453 O CYS 28 -2.657 -3.758 -3.817 1.00 2.45 ATOM 454 CB CYS 28 -1.546 -4.108 -6.980 1.00 2.45 ATOM 455 SG CYS 28 -0.999 -5.228 -8.342 1.00 2.45 ATOM 460 N VAL 29 -0.989 -2.398 -4.507 1.00 2.29 ATOM 461 CA VAL 29 -1.371 -1.300 -3.619 1.00 2.29 ATOM 462 C VAL 29 -1.663 0.015 -4.341 1.00 2.29 ATOM 463 O VAL 29 -0.866 0.509 -5.147 1.00 2.29 ATOM 464 CB VAL 29 -0.280 -1.024 -2.567 1.00 2.29 ATOM 465 CG1 VAL 29 -0.674 0.152 -1.695 1.00 2.29 ATOM 466 CG2 VAL 29 -0.096 -2.205 -1.728 1.00 2.29 ATOM 476 N GLU 30 -2.828 0.581 -4.038 1.00 2.50 ATOM 477 CA GLU 30 -3.221 1.876 -4.578 1.00 2.50 ATOM 478 C GLU 30 -2.786 2.913 -3.548 1.00 2.50 ATOM 479 O GLU 30 -3.101 2.753 -2.367 1.00 2.50 ATOM 480 CB GLU 30 -4.736 1.922 -4.820 1.00 2.50 ATOM 481 CG GLU 30 -5.268 3.189 -5.507 1.00 2.50 ATOM 482 CD GLU 30 -6.788 3.145 -5.723 1.00 2.50 ATOM 483 OE1 GLU 30 -7.413 2.261 -5.176 1.00 2.50 ATOM 484 OE2 GLU 30 -7.312 3.974 -6.453 1.00 2.50 ATOM 491 N VAL 31 -2.044 3.943 -3.965 1.00 2.48 ATOM 492 CA VAL 31 -1.549 4.939 -3.014 1.00 2.48 ATOM 493 C VAL 31 -2.044 6.364 -3.325 1.00 2.48 ATOM 494 O VAL 31 -1.781 6.898 -4.405 1.00 2.48 ATOM 495 CB VAL 31 -0.025 4.975 -3.090 1.00 2.48 ATOM 496 CG1 VAL 31 0.491 5.930 -2.140 1.00 2.48 ATOM 497 CG2 VAL 31 0.570 3.636 -2.893 1.00 2.48 ATOM 507 N ARG 32 -2.699 7.004 -2.352 1.00 2.50 ATOM 508 CA ARG 32 -3.241 8.362 -2.489 1.00 2.50 ATOM 509 C ARG 32 -2.409 9.358 -1.693 1.00 2.50 ATOM 510 O ARG 32 -2.471 9.381 -0.462 1.00 2.50 ATOM 511 CB ARG 32 -4.668 8.424 -1.972 1.00 2.50 ATOM 512 CG ARG 32 -5.672 7.556 -2.699 1.00 2.50 ATOM 513 CD ARG 32 -7.052 7.715 -2.121 1.00 2.50 ATOM 514 NE ARG 32 -7.159 7.205 -0.740 1.00 2.50 ATOM 515 CZ ARG 32 -7.377 5.925 -0.409 1.00 2.50 ATOM 516 NH1 ARG 32 -7.511 4.997 -1.331 1.00 2.50 ATOM 517 NH2 ARG 32 -7.459 5.629 0.863 1.00 2.50 ATOM 531 N CYS 33 -1.590 10.143 -2.377 1.00 2.65 ATOM 532 CA CYS 33 -0.639 11.006 -1.689 1.00 2.65 ATOM 533 C CYS 33 -0.991 12.455 -1.759 1.00 2.65 ATOM 534 O CYS 33 -1.636 12.900 -2.708 1.00 2.65 ATOM 535 CB CYS 33 0.718 10.865 -2.317 1.00 2.65 ATOM 536 SG CYS 33 1.372 9.264 -2.232 1.00 2.65 ATOM 541 N SER 34 -0.524 13.229 -0.793 1.00 3.54 ATOM 542 CA SER 34 -0.744 14.651 -0.953 1.00 3.54 ATOM 543 C SER 34 -0.164 15.054 -2.318 1.00 3.54 ATOM 544 O SER 34 1.002 14.776 -2.607 1.00 3.54 ATOM 545 CB SER 34 -0.071 15.422 0.169 1.00 3.54 ATOM 546 OG SER 34 -0.243 16.808 0.019 1.00 3.54 ATOM 552 N ASP 35 -1.013 15.666 -3.147 1.00 4.29 ATOM 553 CA ASP 35 -0.718 16.146 -4.505 1.00 4.29 ATOM 554 C ASP 35 -0.358 15.095 -5.590 1.00 4.29 ATOM 555 O ASP 35 -0.001 15.491 -6.703 1.00 4.29 ATOM 556 CB ASP 35 0.406 17.186 -4.444 1.00 4.29 ATOM 557 CG ASP 35 0.011 18.410 -3.626 1.00 4.29 ATOM 558 OD1 ASP 35 -1.089 18.884 -3.786 1.00 4.29 ATOM 559 OD2 ASP 35 0.799 18.832 -2.814 1.00 4.29 ATOM 564 N THR 36 -0.449 13.786 -5.307 1.00 4.35 ATOM 565 CA THR 36 -0.134 12.794 -6.354 1.00 4.35 ATOM 566 C THR 36 -0.751 11.392 -6.122 1.00 4.35 ATOM 567 O THR 36 -1.565 11.175 -5.221 1.00 4.35 ATOM 568 CB THR 36 1.403 12.702 -6.592 1.00 4.35 ATOM 569 OG1 THR 36 1.666 11.919 -7.778 1.00 4.35 ATOM 570 CG2 THR 36 2.099 12.086 -5.426 1.00 4.35 ATOM 578 N LYS 37 -0.388 10.445 -6.985 1.00 4.35 ATOM 579 CA LYS 37 -0.917 9.085 -6.880 1.00 4.35 ATOM 580 C LYS 37 0.058 8.041 -7.426 1.00 4.35 ATOM 581 O LYS 37 0.705 8.271 -8.451 1.00 4.35 ATOM 582 CB LYS 37 -2.268 8.981 -7.600 1.00 4.35 ATOM 583 CG LYS 37 -2.985 7.668 -7.360 1.00 4.35 ATOM 584 CD LYS 37 -4.374 7.631 -7.929 1.00 4.35 ATOM 585 CE LYS 37 -5.042 6.354 -7.472 1.00 4.35 ATOM 586 NZ LYS 37 -6.428 6.227 -7.940 1.00 4.35 ATOM 600 N TYR 38 0.158 6.898 -6.736 1.00 4.12 ATOM 601 CA TYR 38 1.035 5.806 -7.181 1.00 4.12 ATOM 602 C TYR 38 0.319 4.458 -7.221 1.00 4.12 ATOM 603 O TYR 38 -0.634 4.214 -6.473 1.00 4.12 ATOM 604 CB TYR 38 2.256 5.643 -6.255 1.00 4.12 ATOM 605 CG TYR 38 3.117 6.847 -6.107 1.00 4.12 ATOM 606 CD1 TYR 38 2.796 7.792 -5.161 1.00 4.12 ATOM 607 CD2 TYR 38 4.238 7.002 -6.893 1.00 4.12 ATOM 608 CE1 TYR 38 3.597 8.903 -5.002 1.00 4.12 ATOM 609 CE2 TYR 38 5.039 8.114 -6.735 1.00 4.12 ATOM 610 CZ TYR 38 4.719 9.061 -5.793 1.00 4.12 ATOM 611 OH TYR 38 5.518 10.170 -5.629 1.00 4.12 ATOM 621 N THR 39 0.806 3.573 -8.082 1.00 3.80 ATOM 622 CA THR 39 0.362 2.185 -8.053 1.00 3.80 ATOM 623 C THR 39 1.593 1.334 -7.838 1.00 3.80 ATOM 624 O THR 39 2.565 1.429 -8.592 1.00 3.80 ATOM 625 CB THR 39 -0.363 1.747 -9.331 1.00 3.80 ATOM 626 OG1 THR 39 -1.521 2.573 -9.529 1.00 3.80 ATOM 627 CG2 THR 39 -0.800 0.274 -9.185 1.00 3.80 ATOM 635 N LEU 40 1.567 0.534 -6.791 1.00 4.63 ATOM 636 CA LEU 40 2.707 -0.285 -6.436 1.00 4.63 ATOM 637 C LEU 40 2.313 -1.731 -6.606 1.00 4.63 ATOM 638 O LEU 40 1.159 -2.068 -6.353 1.00 4.63 ATOM 639 CB LEU 40 3.020 -0.036 -4.984 1.00 4.63 ATOM 640 CG LEU 40 3.143 1.411 -4.611 1.00 4.63 ATOM 641 CD1 LEU 40 3.306 1.468 -3.167 1.00 4.63 ATOM 642 CD2 LEU 40 4.288 2.070 -5.343 1.00 4.63 ATOM 654 N CYS 41 3.240 -2.611 -6.956 1.00 5.53 ATOM 655 CA CYS 41 2.820 -4.002 -7.003 1.00 5.53 ATOM 656 C CYS 41 4.039 -4.909 -7.175 1.00 5.53 ATOM 657 O CYS 41 3.885 -6.089 -7.483 1.00 5.53 ATOM 658 OXT CYS 41 5.049 -4.610 -6.532 1.00 5.53 ATOM 659 CB CYS 41 1.838 -4.230 -8.163 1.00 5.53 ATOM 660 SG CYS 41 0.965 -5.777 -8.044 1.00 5.53 TER END