####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS197_4 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS197_4.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 1.15 1.15 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 1.15 1.15 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 40 2 - 41 0.94 1.17 LCS_AVERAGE: 95.36 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 41 41 3 3 5 8 16 34 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Q 2 Q 2 40 41 41 12 26 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 3 E 3 40 41 41 12 27 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 4 T 4 40 41 41 19 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 5 R 5 40 41 41 18 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 6 K 6 40 41 41 18 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 7 K 7 40 41 41 19 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 8 C 8 40 41 41 19 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 9 T 9 40 41 41 19 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 10 E 10 40 41 41 19 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT M 11 M 11 40 41 41 19 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 12 K 12 40 41 41 19 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 13 K 13 40 41 41 19 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 14 K 14 40 41 41 19 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT F 15 F 15 40 41 41 19 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 16 K 16 40 41 41 8 25 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 17 N 17 40 41 41 19 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 18 C 18 40 41 41 18 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 19 E 19 40 41 41 18 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 20 V 20 40 41 41 14 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 21 R 21 40 41 41 14 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 22 C 22 40 41 41 4 16 35 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 23 D 23 40 41 41 8 16 30 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 24 E 24 40 41 41 14 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 25 S 25 40 41 41 14 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 26 N 26 40 41 41 14 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT H 27 H 27 40 41 41 14 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 28 C 28 40 41 41 19 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 29 V 29 40 41 41 19 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 30 E 30 40 41 41 19 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 31 V 31 40 41 41 19 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 32 R 32 40 41 41 19 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 33 C 33 40 41 41 17 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 34 S 34 40 41 41 4 5 36 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 35 D 35 40 41 41 4 28 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 36 T 36 40 41 41 17 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 37 K 37 40 41 41 19 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Y 38 Y 38 40 41 41 8 25 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 39 T 39 40 41 41 14 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT L 40 L 40 40 41 41 19 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 41 C 41 40 41 41 19 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_AVERAGE LCS_A: 98.45 ( 95.36 100.00 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 19 32 37 40 40 40 41 41 41 41 41 41 41 41 41 41 41 41 41 41 GDT PERCENT_AT 46.34 78.05 90.24 97.56 97.56 97.56 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.34 0.61 0.80 0.94 0.94 0.94 1.15 1.15 1.15 1.15 1.15 1.15 1.15 1.15 1.15 1.15 1.15 1.15 1.15 1.15 GDT RMS_ALL_AT 1.28 1.21 1.19 1.17 1.17 1.17 1.15 1.15 1.15 1.15 1.15 1.15 1.15 1.15 1.15 1.15 1.15 1.15 1.15 1.15 # Checking swapping # possible swapping detected: D 23 D 23 # possible swapping detected: E 24 E 24 # possible swapping detected: E 30 E 30 # possible swapping detected: D 35 D 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 4.259 0 0.099 0.764 6.593 4.091 3.636 5.338 LGA Q 2 Q 2 1.587 0 0.232 1.175 3.447 58.182 46.667 3.447 LGA E 3 E 3 1.288 0 0.048 0.965 4.362 65.455 38.384 4.362 LGA T 4 T 4 0.719 0 0.015 1.093 2.535 81.818 67.792 2.535 LGA R 5 R 5 0.532 0 0.041 1.015 3.566 86.364 60.826 3.566 LGA K 6 K 6 0.514 0 0.028 1.235 7.079 95.455 54.747 7.078 LGA K 7 K 7 0.602 0 0.013 0.635 2.743 81.818 61.212 2.240 LGA C 8 C 8 0.636 0 0.038 0.806 2.609 81.818 72.727 2.609 LGA T 9 T 9 1.010 0 0.017 0.189 1.324 73.636 72.468 1.324 LGA E 10 E 10 0.883 0 0.021 0.406 1.187 81.818 76.364 1.187 LGA M 11 M 11 0.483 0 0.067 0.112 0.621 86.364 90.909 0.509 LGA K 12 K 12 0.535 0 0.045 0.503 1.423 81.818 78.182 0.890 LGA K 13 K 13 0.718 0 0.015 0.574 2.043 81.818 71.717 2.043 LGA K 14 K 14 0.740 0 0.085 1.010 7.065 86.364 52.525 7.065 LGA F 15 F 15 0.487 0 0.083 0.327 2.821 86.364 66.942 2.617 LGA K 16 K 16 1.546 0 0.168 1.264 5.165 65.909 42.222 5.037 LGA N 17 N 17 0.345 0 0.452 1.112 4.657 83.182 56.818 3.799 LGA C 18 C 18 0.743 0 0.130 0.835 2.967 77.727 70.000 2.967 LGA E 19 E 19 0.736 0 0.139 1.210 4.917 86.364 54.747 4.917 LGA V 20 V 20 1.070 0 0.032 0.063 1.383 65.455 65.455 1.224 LGA R 21 R 21 1.035 0 0.045 1.626 8.404 73.636 38.843 7.401 LGA C 22 C 22 1.697 0 0.124 0.154 2.046 50.909 48.788 2.046 LGA D 23 D 23 1.983 0 0.323 1.082 4.705 34.545 26.818 3.039 LGA E 24 E 24 0.726 0 0.019 0.641 2.683 81.818 62.626 1.934 LGA S 25 S 25 1.007 0 0.096 0.746 3.605 73.636 61.818 3.605 LGA N 26 N 26 0.806 0 0.063 1.183 4.953 81.818 59.545 4.953 LGA H 27 H 27 0.496 0 0.062 0.231 1.601 95.455 77.818 1.601 LGA C 28 C 28 0.340 0 0.131 0.186 0.924 95.455 96.970 0.225 LGA V 29 V 29 0.115 0 0.057 0.073 0.335 100.000 100.000 0.156 LGA E 30 E 30 0.258 0 0.146 0.329 1.593 95.455 88.485 1.593 LGA V 31 V 31 0.391 0 0.080 0.238 1.256 95.455 89.870 1.256 LGA R 32 R 32 0.283 0 0.185 1.132 4.669 95.455 60.496 2.632 LGA C 33 C 33 0.904 0 0.498 1.084 3.250 65.909 61.212 1.231 LGA S 34 S 34 1.602 0 0.508 0.533 3.357 50.000 44.242 2.769 LGA D 35 D 35 1.836 0 0.325 1.137 7.188 61.818 34.318 7.188 LGA T 36 T 36 1.354 0 0.033 0.045 1.849 70.000 65.974 1.849 LGA K 37 K 37 0.579 0 0.058 1.044 2.209 77.727 63.030 1.510 LGA Y 38 Y 38 1.250 0 0.095 0.998 4.305 77.727 50.455 4.305 LGA T 39 T 39 0.573 0 0.026 0.068 1.384 77.727 72.468 1.384 LGA L 40 L 40 0.374 0 0.019 0.983 3.793 100.000 69.773 3.793 LGA C 41 C 41 0.503 0 0.246 0.491 1.569 74.091 80.000 0.961 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 1.153 1.278 2.186 76.596 62.388 35.743 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 41 1.15 93.902 97.058 3.273 LGA_LOCAL RMSD: 1.153 Number of atoms: 41 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 1.153 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 1.153 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.051762 * X + -0.750049 * Y + 0.659354 * Z + -2.262654 Y_new = -0.924109 * X + -0.286281 * Y + -0.253112 * Z + 10.354614 Z_new = 0.378607 * X + -0.596213 * Y + -0.707946 * Z + -4.527767 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.514842 -0.388290 -2.441660 [DEG: -86.7940 -22.2474 -139.8968 ] ZXZ: 1.204264 2.357382 2.575821 [DEG: 68.9992 135.0680 147.5837 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS197_4 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS197_4.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 41 1.15 97.058 1.15 REMARK ---------------------------------------------------------- MOLECULE T0955TS197_4 PFRMAT TS TARGET T0955 MODEL 4 PARENT N/A ATOM 1 N SER 1 -3.827 -11.047 -0.815 1.00 0.47 ATOM 0 CA SER 1 -3.021 -12.061 -0.104 1.00 0.47 ATOM 2 CB SER 1 -2.019 -12.720 -1.056 1.00 0.47 ATOM 3 C SER 1 -2.276 -11.437 1.070 1.00 0.47 ATOM 4 O SER 1 -2.042 -10.227 1.093 1.00 0.47 ATOM 5 OG SER 1 -0.709 -12.234 -0.815 1.00 0.47 ATOM 7 N GLN 2 -1.883 -12.260 2.037 1.00 0.58 ATOM 6 CA GLN 2 -1.153 -11.777 3.204 1.00 0.58 ATOM 9 CB GLN 2 -0.818 -12.939 4.143 1.00 0.58 ATOM 10 C GLN 2 0.134 -11.074 2.787 1.00 0.58 ATOM 11 O GLN 2 0.508 -10.055 3.370 1.00 0.58 ATOM 12 CG GLN 2 -2.040 -13.590 4.776 1.00 0.58 ATOM 13 CD GLN 2 -1.676 -14.757 5.675 1.00 0.58 ATOM 14 NE2 GLN 2 -2.352 -14.866 6.813 1.00 0.58 ATOM 17 OE1 GLN 2 -0.784 -15.549 5.355 1.00 0.58 ATOM 19 N GLU 3 0.823 -11.627 1.792 1.00 0.42 ATOM 18 CA GLU 3 2.045 -11.011 1.290 1.00 0.42 ATOM 21 CB GLU 3 2.623 -11.839 0.138 1.00 0.42 ATOM 22 C GLU 3 1.757 -9.591 0.817 1.00 0.42 ATOM 23 O GLU 3 2.555 -8.678 1.039 1.00 0.42 ATOM 24 CG GLU 3 2.916 -13.285 0.513 1.00 0.42 ATOM 25 CD GLU 3 3.531 -14.086 -0.621 1.00 0.42 ATOM 26 OE1 GLU 3 3.474 -13.624 -1.782 1.00 0.42 ATOM 27 OE2 GLU 3 4.077 -15.181 -0.353 1.00 0.42 ATOM 29 N THR 4 0.604 -9.404 0.184 1.00 0.22 ATOM 28 CA THR 4 0.199 -8.082 -0.282 1.00 0.22 ATOM 31 CB THR 4 -1.113 -8.154 -1.090 1.00 0.22 ATOM 32 C THR 4 0.009 -7.142 0.903 1.00 0.22 ATOM 33 O THR 4 0.471 -5.998 0.878 1.00 0.22 ATOM 34 CG2 THR 4 -1.569 -6.765 -1.518 1.00 0.22 ATOM 35 OG1 THR 4 -0.900 -8.958 -2.257 1.00 0.22 ATOM 37 N ARG 5 -0.660 -7.623 1.944 1.00 0.25 ATOM 36 CA ARG 5 -0.868 -6.827 3.148 1.00 0.25 ATOM 39 CB ARG 5 -1.722 -7.604 4.153 1.00 0.25 ATOM 40 C ARG 5 0.474 -6.478 3.780 1.00 0.25 ATOM 41 O ARG 5 0.693 -5.342 4.207 1.00 0.25 ATOM 42 CG ARG 5 -3.169 -7.788 3.720 1.00 0.25 ATOM 43 CD ARG 5 -3.900 -8.772 4.623 1.00 0.25 ATOM 44 NE ARG 5 -5.335 -8.794 4.350 1.00 0.25 ATOM 46 CZ ARG 5 -6.212 -9.583 4.965 1.00 0.25 ATOM 47 NH1 ARG 5 -7.500 -9.529 4.644 1.00 0.25 ATOM 48 NH2 ARG 5 -5.802 -10.431 5.904 1.00 0.25 ATOM 50 N LYS 6 1.378 -7.451 3.824 1.00 0.37 ATOM 49 CA LYS 6 2.713 -7.223 4.368 1.00 0.37 ATOM 52 CB LYS 6 3.538 -8.511 4.315 1.00 0.37 ATOM 53 C LYS 6 3.419 -6.120 3.586 1.00 0.37 ATOM 54 O LYS 6 4.081 -5.260 4.171 1.00 0.37 ATOM 55 CG LYS 6 3.062 -9.591 5.273 1.00 0.37 ATOM 56 CD LYS 6 3.954 -10.823 5.209 1.00 0.37 ATOM 57 CE LYS 6 3.558 -11.858 6.256 1.00 0.37 ATOM 58 NZ LYS 6 4.414 -13.078 6.178 1.00 0.37 ATOM 60 N LYS 7 3.266 -6.139 2.267 1.00 0.32 ATOM 59 CA LYS 7 3.857 -5.111 1.417 1.00 0.32 ATOM 62 CB LYS 7 3.704 -5.476 -0.062 1.00 0.32 ATOM 63 C LYS 7 3.203 -3.761 1.694 1.00 0.32 ATOM 64 O LYS 7 3.844 -2.714 1.575 1.00 0.32 ATOM 65 CG LYS 7 4.655 -6.568 -0.526 1.00 0.32 ATOM 66 CD LYS 7 4.502 -6.850 -2.014 1.00 0.32 ATOM 67 CE LYS 7 5.366 -8.025 -2.454 1.00 0.32 ATOM 68 NZ LYS 7 5.183 -8.337 -3.901 1.00 0.32 ATOM 70 N CYS 8 1.922 -3.787 2.044 1.00 0.28 ATOM 69 CA CYS 8 1.206 -2.562 2.384 1.00 0.28 ATOM 72 CB CYS 8 -0.249 -2.881 2.740 1.00 0.28 ATOM 73 C CYS 8 1.880 -1.894 3.575 1.00 0.28 ATOM 74 O CYS 8 2.038 -0.671 3.606 1.00 0.28 ATOM 75 SG CYS 8 -1.204 -3.579 1.369 1.00 0.28 ATOM 77 N THR 9 2.290 -2.708 4.542 1.00 0.35 ATOM 76 CA THR 9 2.987 -2.208 5.722 1.00 0.35 ATOM 79 CB THR 9 3.300 -3.360 6.702 1.00 0.35 ATOM 80 C THR 9 4.288 -1.527 5.310 1.00 0.35 ATOM 81 O THR 9 4.613 -0.444 5.800 1.00 0.35 ATOM 82 CG2 THR 9 3.426 -2.843 8.129 1.00 0.35 ATOM 83 OG1 THR 9 2.238 -4.320 6.643 1.00 0.35 ATOM 85 N GLU 10 5.025 -2.154 4.400 1.00 0.30 ATOM 84 CA GLU 10 6.266 -1.574 3.899 1.00 0.30 ATOM 87 CB GLU 10 6.903 -2.516 2.872 1.00 0.30 ATOM 88 C GLU 10 5.990 -0.220 3.255 1.00 0.30 ATOM 89 O GLU 10 6.701 0.756 3.505 1.00 0.30 ATOM 90 CG GLU 10 7.966 -1.861 2.003 1.00 0.30 ATOM 91 CD GLU 10 8.557 -2.812 0.976 1.00 0.30 ATOM 92 OE1 GLU 10 8.223 -4.017 1.015 1.00 0.30 ATOM 93 OE2 GLU 10 9.360 -2.357 0.131 1.00 0.30 ATOM 95 N MET 11 4.942 -0.157 2.439 1.00 0.21 ATOM 94 CA MET 11 4.550 1.090 1.792 1.00 0.21 ATOM 97 CB MET 11 3.446 0.827 0.763 1.00 0.21 ATOM 98 C MET 11 4.059 2.096 2.827 1.00 0.21 ATOM 99 O MET 11 4.378 3.283 2.746 1.00 0.21 ATOM 100 CG MET 11 3.935 0.137 -0.502 1.00 0.21 ATOM 101 SD MET 11 5.233 1.078 -1.338 1.00 0.21 ATOM 102 CE MET 11 6.676 0.133 -0.880 1.00 0.21 ATOM 104 N LYS 12 3.268 1.626 3.785 1.00 0.24 ATOM 103 CA LYS 12 2.771 2.487 4.852 1.00 0.24 ATOM 106 CB LYS 12 1.905 1.684 5.826 1.00 0.24 ATOM 107 C LYS 12 3.943 3.114 5.602 1.00 0.24 ATOM 108 O LYS 12 3.904 4.291 5.964 1.00 0.24 ATOM 109 CG LYS 12 0.629 2.396 6.249 1.00 0.24 ATOM 110 CD LYS 12 -0.270 1.482 7.070 1.00 0.24 ATOM 111 CE LYS 12 -1.332 2.272 7.824 1.00 0.24 ATOM 112 NZ LYS 12 -2.270 1.375 8.561 1.00 0.24 ATOM 114 N LYS 13 4.992 2.327 5.817 1.00 0.27 ATOM 113 CA LYS 13 6.188 2.813 6.498 1.00 0.27 ATOM 116 CB LYS 13 7.136 1.654 6.814 1.00 0.27 ATOM 117 C LYS 13 6.905 3.865 5.658 1.00 0.27 ATOM 118 O LYS 13 7.318 4.906 6.175 1.00 0.27 ATOM 119 CG LYS 13 6.650 0.752 7.939 1.00 0.27 ATOM 120 CD LYS 13 7.686 -0.306 8.294 1.00 0.27 ATOM 121 CE LYS 13 7.195 -1.220 9.407 1.00 0.27 ATOM 122 NZ LYS 13 8.201 -2.269 9.749 1.00 0.27 ATOM 124 N LYS 14 7.040 3.603 4.362 1.00 0.32 ATOM 123 CA LYS 14 7.674 4.550 3.453 1.00 0.32 ATOM 126 CB LYS 14 8.009 3.872 2.122 1.00 0.32 ATOM 127 C LYS 14 6.765 5.748 3.203 1.00 0.32 ATOM 128 O LYS 14 7.193 6.899 3.325 1.00 0.32 ATOM 129 CG LYS 14 8.573 4.818 1.073 1.00 0.32 ATOM 130 CD LYS 14 8.667 4.147 -0.290 1.00 0.32 ATOM 131 CE LYS 14 9.422 5.011 -1.292 1.00 0.32 ATOM 132 NZ LYS 14 9.636 4.301 -2.587 1.00 0.32 ATOM 134 N PHE 15 5.506 5.478 2.875 1.00 0.43 ATOM 133 CA PHE 15 4.536 6.535 2.605 1.00 0.43 ATOM 136 CB PHE 15 3.582 6.103 1.485 1.00 0.43 ATOM 137 C PHE 15 3.743 6.864 3.865 1.00 0.43 ATOM 138 O PHE 15 2.545 6.584 3.943 1.00 0.43 ATOM 139 CG PHE 15 4.219 6.044 0.121 1.00 0.43 ATOM 140 CD1 PHE 15 4.577 4.818 -0.429 1.00 0.43 ATOM 141 CE1 PHE 15 5.152 4.764 -1.696 1.00 0.43 ATOM 142 CZ PHE 15 5.361 5.934 -2.414 1.00 0.43 ATOM 143 CD2 PHE 15 4.439 7.216 -0.595 1.00 0.43 ATOM 144 CE2 PHE 15 5.011 7.161 -1.863 1.00 0.43 ATOM 146 N LYS 16 4.407 7.472 4.843 1.00 0.73 ATOM 145 CA LYS 16 3.764 7.810 6.108 1.00 0.73 ATOM 148 CB LYS 16 4.709 8.641 6.981 1.00 0.73 ATOM 149 C LYS 16 2.467 8.579 5.880 1.00 0.73 ATOM 150 O LYS 16 1.419 8.214 6.416 1.00 0.73 ATOM 151 CG LYS 16 5.914 7.869 7.495 1.00 0.73 ATOM 152 CD LYS 16 6.709 8.690 8.502 1.00 0.73 ATOM 153 CE LYS 16 7.858 7.889 9.100 1.00 0.73 ATOM 154 NZ LYS 16 8.623 8.683 10.107 1.00 0.73 ATOM 156 N ASN 17 2.535 9.641 5.084 1.00 0.65 ATOM 155 CA ASN 17 1.359 10.457 4.802 1.00 0.65 ATOM 158 CB ASN 17 1.712 11.946 4.880 1.00 0.65 ATOM 159 C ASN 17 0.778 10.129 3.431 1.00 0.65 ATOM 160 O ASN 17 0.798 10.964 2.525 1.00 0.65 ATOM 161 CG ASN 17 0.508 12.843 4.665 1.00 0.65 ATOM 162 ND2 ASN 17 0.734 14.012 4.079 1.00 0.65 ATOM 165 OD1 ASN 17 -0.619 12.485 5.018 1.00 0.65 ATOM 167 N CYS 18 0.270 8.911 3.278 1.00 0.42 ATOM 166 CA CYS 18 -0.284 8.472 2.001 1.00 0.42 ATOM 169 CB CYS 18 0.838 7.965 1.092 1.00 0.42 ATOM 170 C CYS 18 -1.324 7.375 2.198 1.00 0.42 ATOM 171 O CYS 18 -1.034 6.341 2.803 1.00 0.42 ATOM 172 SG CYS 18 0.312 7.633 -0.608 1.00 0.42 ATOM 174 N GLU 19 -2.535 7.603 1.704 1.00 0.35 ATOM 173 CA GLU 19 -3.602 6.616 1.820 1.00 0.35 ATOM 176 CB GLU 19 -4.895 7.157 1.203 1.00 0.35 ATOM 177 C GLU 19 -3.208 5.309 1.142 1.00 0.35 ATOM 178 O GLU 19 -3.052 5.262 -0.080 1.00 0.35 ATOM 179 CG GLU 19 -5.470 8.357 1.941 1.00 0.35 ATOM 180 CD GLU 19 -5.732 8.085 3.412 1.00 0.35 ATOM 181 OE1 GLU 19 -5.807 6.897 3.797 1.00 0.35 ATOM 182 OE2 GLU 19 -5.854 9.058 4.188 1.00 0.35 ATOM 184 N VAL 20 -3.063 4.247 1.928 1.00 0.28 ATOM 183 CA VAL 20 -2.644 2.955 1.393 1.00 0.28 ATOM 186 CB VAL 20 -1.491 2.352 2.227 1.00 0.28 ATOM 187 C VAL 20 -3.817 1.980 1.357 1.00 0.28 ATOM 188 O VAL 20 -4.411 1.675 2.393 1.00 0.28 ATOM 189 CG1 VAL 20 -1.114 0.971 1.702 1.00 0.28 ATOM 190 CG2 VAL 20 -0.276 3.273 2.204 1.00 0.28 ATOM 192 N ARG 21 -4.144 1.479 0.168 1.00 0.20 ATOM 191 CA ARG 21 -5.218 0.504 0.020 1.00 0.20 ATOM 194 CB ARG 21 -6.325 1.049 -0.886 1.00 0.20 ATOM 195 C ARG 21 -4.675 -0.796 -0.563 1.00 0.20 ATOM 196 O ARG 21 -3.853 -0.773 -1.481 1.00 0.20 ATOM 197 CG ARG 21 -6.673 2.507 -0.633 1.00 0.20 ATOM 198 CD ARG 21 -7.392 2.689 0.698 1.00 0.20 ATOM 199 NE ARG 21 -8.026 4.000 0.795 1.00 0.20 ATOM 201 CZ ARG 21 -7.810 4.879 1.769 1.00 0.20 ATOM 202 NH1 ARG 21 -8.440 6.049 1.765 1.00 0.20 ATOM 203 NH2 ARG 21 -6.969 4.587 2.756 1.00 0.20 ATOM 205 N CYS 22 -5.134 -1.929 -0.039 1.00 0.24 ATOM 204 CA CYS 22 -4.659 -3.223 -0.517 1.00 0.24 ATOM 207 CB CYS 22 -4.164 -4.080 0.653 1.00 0.24 ATOM 208 C CYS 22 -5.754 -3.974 -1.266 1.00 0.24 ATOM 209 O CYS 22 -6.815 -4.255 -0.707 1.00 0.24 ATOM 210 SG CYS 22 -3.198 -3.164 1.879 1.00 0.24 ATOM 212 N ASP 23 -5.497 -4.292 -2.531 1.00 0.23 ATOM 211 CA ASP 23 -6.455 -5.045 -3.335 1.00 0.23 ATOM 214 CB ASP 23 -6.631 -4.395 -4.710 1.00 0.23 ATOM 215 C ASP 23 -6.000 -6.492 -3.493 1.00 0.23 ATOM 216 O ASP 23 -5.155 -6.794 -4.338 1.00 0.23 ATOM 217 CG ASP 23 -7.760 -5.009 -5.515 1.00 0.23 ATOM 218 OD1 ASP 23 -8.275 -6.074 -5.111 1.00 0.23 ATOM 219 OD2 ASP 23 -8.145 -4.425 -6.552 1.00 0.23 ATOM 221 N GLU 24 -6.549 -7.384 -2.675 1.00 0.36 ATOM 220 CA GLU 24 -6.173 -8.792 -2.733 1.00 0.36 ATOM 223 CB GLU 24 -6.867 -9.584 -1.622 1.00 0.36 ATOM 224 C GLU 24 -6.516 -9.385 -4.095 1.00 0.36 ATOM 225 O GLU 24 -5.834 -10.292 -4.576 1.00 0.36 ATOM 226 CG GLU 24 -6.382 -9.230 -0.223 1.00 0.36 ATOM 227 CD GLU 24 -6.980 -10.111 0.861 1.00 0.36 ATOM 228 OE1 GLU 24 -8.077 -10.670 0.641 1.00 0.36 ATOM 229 OE2 GLU 24 -6.349 -10.254 1.932 1.00 0.36 ATOM 231 N SER 25 -7.584 -8.886 -4.710 1.00 0.40 ATOM 230 CA SER 25 -7.985 -9.359 -6.030 1.00 0.40 ATOM 233 CB SER 25 -9.264 -8.657 -6.494 1.00 0.40 ATOM 234 C SER 25 -6.872 -9.138 -7.047 1.00 0.40 ATOM 235 O SER 25 -6.338 -10.096 -7.610 1.00 0.40 ATOM 236 OG SER 25 -8.956 -7.599 -7.387 1.00 0.40 ATOM 238 N ASN 26 -6.511 -7.879 -7.274 1.00 0.43 ATOM 237 CA ASN 26 -5.427 -7.552 -8.193 1.00 0.43 ATOM 240 CB ASN 26 -5.491 -6.075 -8.596 1.00 0.43 ATOM 241 C ASN 26 -4.080 -7.864 -7.551 1.00 0.43 ATOM 242 O ASN 26 -3.037 -7.795 -8.204 1.00 0.43 ATOM 243 CG ASN 26 -6.708 -5.757 -9.443 1.00 0.43 ATOM 244 ND2 ASN 26 -7.350 -4.629 -9.165 1.00 0.43 ATOM 247 OD1 ASN 26 -7.078 -6.528 -10.333 1.00 0.43 ATOM 249 N HIS 27 -4.109 -8.232 -6.274 1.00 0.26 ATOM 248 CA HIS 27 -2.879 -8.516 -5.545 1.00 0.26 ATOM 251 CB HIS 27 -2.213 -9.783 -6.096 1.00 0.26 ATOM 252 C HIS 27 -1.927 -7.331 -5.639 1.00 0.26 ATOM 253 O HIS 27 -0.720 -7.505 -5.818 1.00 0.26 ATOM 254 CG HIS 27 -3.061 -11.005 -5.919 1.00 0.26 ATOM 255 ND1 HIS 27 -3.270 -11.586 -4.687 1.00 0.26 ATOM 257 CE1 HIS 27 -4.074 -12.617 -4.886 1.00 0.26 ATOM 258 NE2 HIS 27 -4.398 -12.718 -6.165 1.00 0.26 ATOM 260 CD2 HIS 27 -3.777 -11.696 -6.840 1.00 0.26 ATOM 262 N CYS 28 -2.477 -6.124 -5.536 1.00 0.20 ATOM 261 CA CYS 28 -1.669 -4.914 -5.644 1.00 0.20 ATOM 264 CB CYS 28 -1.910 -4.229 -6.991 1.00 0.20 ATOM 265 C CYS 28 -1.973 -3.938 -4.512 1.00 0.20 ATOM 266 O CYS 28 -3.044 -3.997 -3.904 1.00 0.20 ATOM 267 SG CYS 28 -1.620 -5.302 -8.420 1.00 0.20 ATOM 269 N VAL 29 -1.023 -3.056 -4.224 1.00 0.20 ATOM 268 CA VAL 29 -1.201 -2.040 -3.191 1.00 0.20 ATOM 271 CB VAL 29 -0.063 -2.085 -2.145 1.00 0.20 ATOM 272 C VAL 29 -1.244 -0.660 -3.840 1.00 0.20 ATOM 273 O VAL 29 -0.338 -0.293 -4.594 1.00 0.20 ATOM 274 CG1 VAL 29 -0.210 -0.937 -1.151 1.00 0.20 ATOM 275 CG2 VAL 29 -0.054 -3.423 -1.414 1.00 0.20 ATOM 277 N GLU 30 -2.297 0.101 -3.562 1.00 0.16 ATOM 276 CA GLU 30 -2.427 1.441 -4.123 1.00 0.16 ATOM 279 CB GLU 30 -3.807 1.623 -4.764 1.00 0.16 ATOM 280 C GLU 30 -2.201 2.511 -3.061 1.00 0.16 ATOM 281 O GLU 30 -3.000 2.658 -2.135 1.00 0.16 ATOM 282 CG GLU 30 -3.953 2.918 -5.548 1.00 0.16 ATOM 283 CD GLU 30 -5.231 2.983 -6.367 1.00 0.16 ATOM 284 OE1 GLU 30 -6.317 2.731 -5.800 1.00 0.16 ATOM 285 OE2 GLU 30 -5.150 3.276 -7.582 1.00 0.16 ATOM 287 N VAL 31 -1.097 3.241 -3.189 1.00 0.20 ATOM 286 CA VAL 31 -0.781 4.320 -2.259 1.00 0.20 ATOM 289 CB VAL 31 0.706 4.267 -1.841 1.00 0.20 ATOM 290 C VAL 31 -1.073 5.655 -2.940 1.00 0.20 ATOM 291 O VAL 31 -0.470 5.974 -3.968 1.00 0.20 ATOM 292 CG1 VAL 31 0.891 4.874 -0.455 1.00 0.20 ATOM 293 CG2 VAL 31 1.219 2.831 -1.858 1.00 0.20 ATOM 295 N ARG 32 -1.981 6.442 -2.371 1.00 0.45 ATOM 294 CA ARG 32 -2.355 7.718 -2.971 1.00 0.45 ATOM 297 CB ARG 32 -3.822 7.684 -3.412 1.00 0.45 ATOM 298 C ARG 32 -2.145 8.880 -2.005 1.00 0.45 ATOM 299 O ARG 32 -2.574 8.818 -0.852 1.00 0.45 ATOM 300 CG ARG 32 -4.145 6.580 -4.406 1.00 0.45 ATOM 301 CD ARG 32 -5.563 6.712 -4.946 1.00 0.45 ATOM 302 NE ARG 32 -5.741 7.946 -5.706 1.00 0.45 ATOM 304 CZ ARG 32 -6.844 8.273 -6.375 1.00 0.45 ATOM 305 NH1 ARG 32 -6.906 9.423 -7.038 1.00 0.45 ATOM 306 NH2 ARG 32 -7.890 7.454 -6.381 1.00 0.45 ATOM 308 N CYS 33 -1.502 9.944 -2.478 1.00 0.95 ATOM 307 CA CYS 33 -1.281 11.119 -1.642 1.00 0.95 ATOM 310 CB CYS 33 -0.305 10.796 -0.507 1.00 0.95 ATOM 311 C CYS 33 -0.760 12.309 -2.440 1.00 0.95 ATOM 312 O CYS 33 0.036 12.146 -3.367 1.00 0.95 ATOM 313 SG CYS 33 1.208 9.968 -1.058 1.00 0.95 ATOM 315 N SER 34 -1.198 13.507 -2.063 1.00 0.78 ATOM 314 CA SER 34 -0.739 14.727 -2.719 1.00 0.78 ATOM 317 CB SER 34 0.732 14.988 -2.385 1.00 0.78 ATOM 318 C SER 34 -0.923 14.666 -4.230 1.00 0.78 ATOM 319 O SER 34 -0.034 15.069 -4.984 1.00 0.78 ATOM 320 OG SER 34 1.026 14.574 -1.061 1.00 0.78 ATOM 322 N ASP 35 -2.064 14.150 -4.677 1.00 1.33 ATOM 321 CA ASP 35 -2.357 14.074 -6.104 1.00 1.33 ATOM 324 CB ASP 35 -2.353 15.475 -6.725 1.00 1.33 ATOM 325 C ASP 35 -1.360 13.180 -6.833 1.00 1.33 ATOM 326 O ASP 35 -1.003 13.446 -7.983 1.00 1.33 ATOM 327 CG ASP 35 -3.469 16.360 -6.202 1.00 1.33 ATOM 328 OD1 ASP 35 -4.509 15.820 -5.767 1.00 1.33 ATOM 329 OD2 ASP 35 -3.310 17.600 -6.219 1.00 1.33 ATOM 331 N THR 36 -0.902 12.125 -6.167 1.00 0.60 ATOM 330 CA THR 36 0.030 11.181 -6.773 1.00 0.60 ATOM 333 CB THR 36 1.493 11.561 -6.459 1.00 0.60 ATOM 334 C THR 36 -0.242 9.768 -6.271 1.00 0.60 ATOM 335 O THR 36 -0.311 9.539 -5.061 1.00 0.60 ATOM 336 CG2 THR 36 2.464 10.741 -7.298 1.00 0.60 ATOM 337 OG1 THR 36 1.685 12.952 -6.747 1.00 0.60 ATOM 339 N LYS 37 -0.391 8.818 -7.188 1.00 0.42 ATOM 338 CA LYS 37 -0.695 7.442 -6.812 1.00 0.42 ATOM 341 CB LYS 37 -2.021 6.998 -7.435 1.00 0.42 ATOM 342 C LYS 37 0.415 6.484 -7.229 1.00 0.42 ATOM 343 O LYS 37 0.919 6.553 -8.353 1.00 0.42 ATOM 344 CG LYS 37 -1.985 6.900 -8.952 1.00 0.42 ATOM 345 CD LYS 37 -3.352 6.540 -9.518 1.00 0.42 ATOM 346 CE LYS 37 -3.278 6.222 -11.006 1.00 0.42 ATOM 347 NZ LYS 37 -4.605 5.807 -11.550 1.00 0.42 ATOM 349 N TYR 38 0.789 5.583 -6.325 1.00 0.26 ATOM 348 CA TYR 38 1.814 4.584 -6.603 1.00 0.26 ATOM 351 CB TYR 38 3.000 4.756 -5.647 1.00 0.26 ATOM 352 C TYR 38 1.237 3.182 -6.441 1.00 0.26 ATOM 353 O TYR 38 0.634 2.871 -5.414 1.00 0.26 ATOM 354 CG TYR 38 3.303 6.197 -5.298 1.00 0.26 ATOM 355 CD1 TYR 38 2.449 6.907 -4.459 1.00 0.26 ATOM 356 CE1 TYR 38 2.728 8.234 -4.149 1.00 0.26 ATOM 357 CZ TYR 38 3.862 8.843 -4.658 1.00 0.26 ATOM 358 CD2 TYR 38 4.444 6.811 -5.804 1.00 0.26 ATOM 359 CE2 TYR 38 4.719 8.136 -5.485 1.00 0.26 ATOM 360 OH TYR 38 4.140 10.155 -4.341 1.00 0.26 ATOM 362 N THR 39 1.415 2.341 -7.454 1.00 0.26 ATOM 361 CA THR 39 0.878 0.984 -7.419 1.00 0.26 ATOM 364 CB THR 39 0.045 0.678 -8.682 1.00 0.26 ATOM 365 C THR 39 1.992 -0.047 -7.283 1.00 0.26 ATOM 366 O THR 39 2.821 -0.200 -8.185 1.00 0.26 ATOM 367 CG2 THR 39 -0.754 -0.607 -8.510 1.00 0.26 ATOM 368 OG1 THR 39 -0.863 1.761 -8.917 1.00 0.26 ATOM 370 N LEU 40 2.005 -0.757 -6.160 1.00 0.21 ATOM 369 CA LEU 40 3.003 -1.796 -5.925 1.00 0.21 ATOM 372 CB LEU 40 3.603 -1.642 -4.523 1.00 0.21 ATOM 373 C LEU 40 2.375 -3.177 -6.066 1.00 0.21 ATOM 374 O LEU 40 1.526 -3.562 -5.259 1.00 0.21 ATOM 375 CG LEU 40 4.618 -2.705 -4.095 1.00 0.21 ATOM 376 CD1 LEU 40 5.886 -2.582 -4.929 1.00 0.21 ATOM 377 CD2 LEU 40 4.938 -2.560 -2.613 1.00 0.21 ATOM 379 N CYS 41 2.772 -3.918 -7.096 1.00 0.27 ATOM 378 CA CYS 41 2.222 -5.250 -7.326 1.00 0.27 ATOM 381 CB CYS 41 1.324 -5.249 -8.566 1.00 0.27 ATOM 382 C CYS 41 3.329 -6.285 -7.482 1.00 0.27 ATOM 383 O CYS 41 4.233 -6.333 -6.623 1.00 0.27 ATOM 384 OXT CYS 41 3.296 -7.056 -8.464 1.00 0.27 ATOM 385 SG CYS 41 0.308 -3.758 -8.727 1.00 0.27 TER END