####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 334), selected 41 , name T0955TS192_2 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS192_2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 2.22 2.22 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 38 4 - 41 1.97 2.31 LCS_AVERAGE: 91.79 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 2 - 17 0.94 2.82 LCS_AVERAGE: 25.22 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 33 41 3 3 4 4 16 24 35 38 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Q 2 Q 2 16 33 41 11 14 19 25 29 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 3 E 3 16 33 41 11 14 19 25 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 4 T 4 16 38 41 11 14 19 26 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 5 R 5 16 38 41 11 14 20 27 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 6 K 6 16 38 41 11 14 20 27 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 7 K 7 16 38 41 11 14 20 27 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 8 C 8 16 38 41 11 14 23 27 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 9 T 9 16 38 41 11 14 23 27 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 10 E 10 16 38 41 11 14 23 27 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT M 11 M 11 16 38 41 11 14 23 27 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 12 K 12 16 38 41 11 14 23 27 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 13 K 13 16 38 41 11 14 23 27 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 14 K 14 16 38 41 11 14 23 27 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT F 15 F 15 16 38 41 4 14 20 27 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 16 K 16 16 38 41 4 5 19 25 31 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 17 N 17 16 38 41 6 14 23 27 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 18 C 18 7 38 41 6 14 23 27 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 19 E 19 7 38 41 5 14 23 27 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 20 V 20 7 38 41 6 13 23 27 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 21 R 21 7 38 41 9 14 23 27 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 22 C 22 7 38 41 6 9 19 25 31 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 23 D 23 7 38 41 6 12 23 26 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 24 E 24 4 38 41 3 12 20 27 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 25 S 25 6 38 41 3 5 11 25 31 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 26 N 26 6 38 41 3 5 8 14 31 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT H 27 H 27 6 38 41 3 6 12 25 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 28 C 28 7 38 41 6 14 23 27 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 29 V 29 8 38 41 6 14 23 27 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 30 E 30 8 38 41 6 14 23 27 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 31 V 31 8 38 41 6 14 23 27 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 32 R 32 8 38 41 6 14 23 27 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 33 C 33 8 38 41 6 14 23 27 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 34 S 34 8 38 41 3 5 13 16 27 33 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 35 D 35 8 38 41 3 4 13 17 28 33 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 36 T 36 8 38 41 6 9 19 25 30 35 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 37 K 37 6 38 41 6 14 23 27 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Y 38 Y 38 6 38 41 4 13 23 27 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 39 T 39 6 38 41 3 10 23 27 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT L 40 L 40 6 38 41 3 13 23 27 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 41 C 41 6 38 41 3 6 20 27 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_AVERAGE LCS_A: 72.34 ( 25.22 91.79 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 11 14 23 27 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 41 GDT PERCENT_AT 26.83 34.15 56.10 65.85 78.05 90.24 92.68 97.56 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.28 0.46 1.02 1.28 1.58 1.86 1.91 2.08 2.22 2.22 2.22 2.22 2.22 2.22 2.22 2.22 2.22 2.22 2.22 2.22 GDT RMS_ALL_AT 3.83 3.74 2.71 2.36 2.27 2.28 2.26 2.24 2.22 2.22 2.22 2.22 2.22 2.22 2.22 2.22 2.22 2.22 2.22 2.22 # Checking swapping # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 5.730 0 0.547 0.740 9.225 0.455 0.303 9.225 LGA Q 2 Q 2 3.502 0 0.301 1.236 4.159 15.455 15.758 3.582 LGA E 3 E 3 2.996 0 0.036 1.494 5.951 27.727 14.545 4.343 LGA T 4 T 4 2.204 0 0.023 1.210 3.966 48.182 42.338 3.966 LGA R 5 R 5 1.379 0 0.021 1.164 5.305 65.909 41.157 5.305 LGA K 6 K 6 1.405 0 0.027 0.794 2.637 65.909 52.121 1.862 LGA K 7 K 7 1.091 0 0.092 0.599 4.285 73.636 54.747 4.285 LGA C 8 C 8 0.585 0 0.042 0.067 1.076 81.818 79.091 1.076 LGA T 9 T 9 0.831 0 0.039 0.105 1.504 81.818 72.727 1.504 LGA E 10 E 10 0.334 0 0.037 0.376 1.625 90.909 77.172 1.625 LGA M 11 M 11 1.213 0 0.115 0.926 3.790 65.909 52.955 3.790 LGA K 12 K 12 1.715 0 0.144 0.833 4.925 48.636 38.990 4.925 LGA K 13 K 13 1.120 0 0.067 0.553 3.276 65.455 55.758 1.840 LGA K 14 K 14 1.494 0 0.090 0.568 2.734 58.182 53.131 2.734 LGA F 15 F 15 2.067 0 0.469 1.070 4.705 29.545 37.190 3.061 LGA K 16 K 16 2.705 0 0.658 1.528 8.202 23.636 13.939 8.202 LGA N 17 N 17 0.409 0 0.387 0.889 2.552 83.182 71.818 1.828 LGA C 18 C 18 1.205 0 0.094 0.844 4.461 65.455 53.030 4.461 LGA E 19 E 19 1.123 0 0.279 0.606 3.277 69.545 60.606 3.277 LGA V 20 V 20 1.643 0 0.108 0.183 2.250 47.727 47.273 2.250 LGA R 21 R 21 2.097 0 0.085 1.390 7.084 38.636 28.595 3.747 LGA C 22 C 22 3.164 0 0.029 0.619 4.058 22.727 17.879 4.058 LGA D 23 D 23 2.897 0 0.157 0.985 6.829 30.455 17.955 4.934 LGA E 24 E 24 2.291 0 0.030 0.924 4.719 39.545 23.636 4.361 LGA S 25 S 25 2.923 0 0.265 0.273 4.107 30.455 22.121 4.107 LGA N 26 N 26 3.426 0 0.624 1.161 4.292 18.636 13.409 4.292 LGA H 27 H 27 2.596 0 0.223 0.242 5.650 35.909 17.273 5.650 LGA C 28 C 28 1.097 0 0.063 0.671 2.003 65.909 61.212 2.003 LGA V 29 V 29 1.748 0 0.108 1.234 3.357 51.364 43.117 2.620 LGA E 30 E 30 1.341 0 0.047 0.193 1.729 61.818 64.040 1.729 LGA V 31 V 31 0.843 0 0.039 0.080 1.046 81.818 79.481 0.612 LGA R 32 R 32 0.163 0 0.157 1.139 3.513 86.818 73.388 3.513 LGA C 33 C 33 0.909 0 0.513 0.905 3.506 60.909 57.576 1.897 LGA S 34 S 34 3.553 0 0.537 0.948 4.673 15.455 11.515 4.673 LGA D 35 D 35 4.127 0 0.172 1.139 9.172 10.000 5.000 9.172 LGA T 36 T 36 2.702 0 0.216 1.060 4.990 35.909 30.130 2.045 LGA K 37 K 37 1.055 0 0.104 1.507 4.473 51.364 43.232 4.473 LGA Y 38 Y 38 1.801 0 0.144 1.110 7.872 58.182 32.576 7.872 LGA T 39 T 39 2.197 0 0.128 0.151 3.064 35.455 29.351 3.064 LGA L 40 L 40 1.740 0 0.087 0.925 2.867 50.909 46.364 1.724 LGA C 41 C 41 1.925 1 0.393 0.479 4.425 39.545 25.974 4.425 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 334 99.70 41 41 SUMMARY(RMSD_GDC): 2.223 2.269 2.946 49.534 40.938 21.641 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 40 2.08 74.390 84.490 1.835 LGA_LOCAL RMSD: 2.079 Number of atoms: 40 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.240 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 2.223 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.775838 * X + 0.195326 * Y + -0.599935 * Z + -17.194212 Y_new = 0.185047 * X + 0.838610 * Y + 0.512338 * Z + -71.033630 Z_new = 0.603185 * X + -0.508508 * Y + 0.614482 * Z + -33.411308 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.234138 -0.647488 -0.691309 [DEG: 13.4151 -37.0984 -39.6091 ] ZXZ: -2.277601 0.909068 2.271235 [DEG: -130.4969 52.0857 130.1322 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS192_2 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS192_2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 40 2.08 84.490 2.22 REMARK ---------------------------------------------------------- MOLECULE T0955TS192_2 PFRMAT TS TARGET T0955 MODEL 2 PARENT N/A ATOM 1 N SER 1 -5.175 -13.612 2.865 1.00 3.38 ATOM 2 CA SER 1 -4.503 -12.523 2.145 1.00 3.38 ATOM 4 CB SER 1 -5.548 -11.526 1.614 1.00 3.38 ATOM 7 OG SER 1 -6.343 -11.023 2.672 1.00 3.38 ATOM 9 C SER 1 -3.411 -11.836 2.976 1.00 3.38 ATOM 10 O SER 1 -3.001 -10.701 2.702 1.00 3.38 ATOM 11 N GLN 2 -2.934 -12.523 4.015 1.00 2.66 ATOM 13 CA GLN 2 -1.966 -12.018 4.996 1.00 2.66 ATOM 15 CB GLN 2 -1.480 -13.167 5.899 1.00 2.66 ATOM 18 CG GLN 2 -2.573 -13.809 6.777 1.00 2.66 ATOM 21 CD GLN 2 -2.028 -14.927 7.673 1.00 2.66 ATOM 22 OE1 GLN 2 -0.849 -15.215 7.710 1.00 2.66 ATOM 23 NE2 GLN 2 -2.868 -15.606 8.426 1.00 2.66 ATOM 26 C GLN 2 -0.764 -11.312 4.349 1.00 2.66 ATOM 27 O GLN 2 -0.476 -10.169 4.715 1.00 2.66 ATOM 28 N GLU 3 -0.104 -11.916 3.348 1.00 2.47 ATOM 30 CA GLU 3 1.045 -11.256 2.708 1.00 2.47 ATOM 32 CB GLU 3 2.042 -12.233 2.054 1.00 2.47 ATOM 35 CG GLU 3 3.519 -11.752 2.125 1.00 2.47 ATOM 38 CD GLU 3 3.965 -10.780 1.016 1.00 2.47 ATOM 39 OE1 GLU 3 4.427 -9.637 1.294 1.00 2.47 ATOM 40 OE2 GLU 3 3.846 -11.160 -0.170 1.00 2.47 ATOM 41 C GLU 3 0.663 -10.063 1.814 1.00 2.47 ATOM 42 O GLU 3 1.426 -9.102 1.730 1.00 2.47 ATOM 43 N THR 4 -0.550 -10.022 1.251 1.00 2.37 ATOM 45 CA THR 4 -1.099 -8.806 0.625 1.00 2.37 ATOM 47 CB THR 4 -2.507 -9.062 0.055 1.00 2.37 ATOM 49 CG2 THR 4 -2.896 -8.003 -0.955 1.00 2.37 ATOM 53 OG1 THR 4 -2.585 -10.303 -0.603 1.00 2.37 ATOM 55 C THR 4 -1.180 -7.658 1.629 1.00 2.37 ATOM 56 O THR 4 -0.725 -6.543 1.347 1.00 2.37 ATOM 57 N ARG 5 -1.714 -7.918 2.835 1.00 1.88 ATOM 59 CA ARG 5 -1.899 -6.854 3.849 1.00 1.88 ATOM 61 CB ARG 5 -2.879 -7.296 4.949 1.00 1.88 ATOM 64 CG ARG 5 -4.166 -7.982 4.449 1.00 1.88 ATOM 67 CD ARG 5 -4.848 -7.297 3.254 1.00 1.88 ATOM 70 NE ARG 5 -5.942 -8.124 2.721 1.00 1.88 ATOM 72 CZ ARG 5 -7.061 -7.680 2.184 1.00 1.88 ATOM 73 NH1 ARG 5 -8.004 -8.512 1.877 1.00 1.88 ATOM 76 NH2 ARG 5 -7.268 -6.417 1.958 1.00 1.88 ATOM 79 C ARG 5 -0.567 -6.375 4.445 1.00 1.88 ATOM 80 O ARG 5 -0.364 -5.172 4.664 1.00 1.88 ATOM 81 N LYS 6 0.378 -7.304 4.629 1.00 1.51 ATOM 83 CA LYS 6 1.778 -7.013 4.985 1.00 1.51 ATOM 85 CB LYS 6 2.546 -8.341 5.146 1.00 1.51 ATOM 88 CG LYS 6 4.002 -8.204 5.644 1.00 1.51 ATOM 91 CD LYS 6 5.080 -8.546 4.594 1.00 1.51 ATOM 94 CE LYS 6 5.498 -7.354 3.728 1.00 1.51 ATOM 97 NZ LYS 6 6.248 -7.775 2.521 1.00 1.51 ATOM 101 C LYS 6 2.444 -6.100 3.960 1.00 1.51 ATOM 102 O LYS 6 3.043 -5.101 4.347 1.00 1.51 ATOM 103 N LYS 7 2.335 -6.419 2.668 1.00 1.61 ATOM 105 CA LYS 7 2.920 -5.607 1.589 1.00 1.61 ATOM 107 CB LYS 7 2.759 -6.357 0.265 1.00 1.61 ATOM 110 CG LYS 7 3.590 -5.715 -0.861 1.00 1.61 ATOM 113 CD LYS 7 3.561 -6.481 -2.189 1.00 1.61 ATOM 116 CE LYS 7 4.381 -7.787 -2.203 1.00 1.61 ATOM 119 NZ LYS 7 3.724 -8.872 -1.445 1.00 1.61 ATOM 123 C LYS 7 2.316 -4.199 1.552 1.00 1.61 ATOM 124 O LYS 7 3.053 -3.219 1.549 1.00 1.61 ATOM 125 N CYS 8 0.993 -4.083 1.649 1.00 1.49 ATOM 127 CA CYS 8 0.327 -2.782 1.774 1.00 1.49 ATOM 129 CB CYS 8 -1.177 -3.093 1.881 1.00 1.49 ATOM 132 SG CYS 8 -2.187 -1.594 1.772 1.00 1.49 ATOM 134 C CYS 8 0.846 -1.927 2.950 1.00 1.49 ATOM 135 O CYS 8 1.113 -0.733 2.789 1.00 1.49 ATOM 136 N THR 9 1.073 -2.556 4.112 1.00 1.34 ATOM 138 CA THR 9 1.664 -1.897 5.295 1.00 1.34 ATOM 140 CB THR 9 1.573 -2.822 6.521 1.00 1.34 ATOM 142 CG2 THR 9 2.127 -2.202 7.805 1.00 1.34 ATOM 146 OG1 THR 9 0.226 -3.118 6.791 1.00 1.34 ATOM 148 C THR 9 3.122 -1.457 5.096 1.00 1.34 ATOM 149 O THR 9 3.513 -0.379 5.553 1.00 1.34 ATOM 150 N GLU 10 3.943 -2.266 4.421 1.00 1.30 ATOM 152 CA GLU 10 5.344 -1.957 4.101 1.00 1.30 ATOM 154 CB GLU 10 5.955 -3.209 3.440 1.00 1.30 ATOM 157 CG GLU 10 7.467 -3.117 3.195 1.00 1.30 ATOM 160 CD GLU 10 7.971 -4.214 2.239 1.00 1.30 ATOM 161 OE1 GLU 10 7.413 -5.337 2.243 1.00 1.30 ATOM 162 OE2 GLU 10 8.921 -3.902 1.484 1.00 1.30 ATOM 163 C GLU 10 5.450 -0.744 3.173 1.00 1.30 ATOM 164 O GLU 10 6.202 0.190 3.455 1.00 1.30 ATOM 165 N MET 11 4.642 -0.729 2.113 1.00 1.26 ATOM 167 CA MET 11 4.525 0.380 1.165 1.00 1.26 ATOM 169 CB MET 11 3.570 -0.035 0.033 1.00 1.26 ATOM 172 CG MET 11 4.281 -0.833 -1.071 1.00 1.26 ATOM 175 SD MET 11 5.154 -2.364 -0.638 1.00 1.26 ATOM 176 CE MET 11 5.541 -2.958 -2.307 1.00 1.26 ATOM 180 C MET 11 4.070 1.669 1.841 1.00 1.26 ATOM 181 O MET 11 4.713 2.706 1.658 1.00 1.26 ATOM 182 N LYS 12 3.040 1.602 2.699 1.00 1.44 ATOM 184 CA LYS 12 2.614 2.739 3.535 1.00 1.44 ATOM 186 CB LYS 12 1.417 2.290 4.395 1.00 1.44 ATOM 189 CG LYS 12 0.616 3.446 5.015 1.00 1.44 ATOM 192 CD LYS 12 -0.512 2.890 5.896 1.00 1.44 ATOM 195 CE LYS 12 -1.426 3.974 6.494 1.00 1.44 ATOM 198 NZ LYS 12 -2.305 4.600 5.473 1.00 1.44 ATOM 202 C LYS 12 3.782 3.287 4.351 1.00 1.44 ATOM 203 O LYS 12 4.132 4.453 4.198 1.00 1.44 ATOM 204 N LYS 13 4.457 2.452 5.150 1.00 1.72 ATOM 206 CA LYS 13 5.589 2.887 5.993 1.00 1.72 ATOM 208 CB LYS 13 6.054 1.715 6.872 1.00 1.72 ATOM 211 CG LYS 13 5.038 1.414 7.987 1.00 1.72 ATOM 214 CD LYS 13 5.479 0.220 8.843 1.00 1.72 ATOM 217 CE LYS 13 4.443 -0.034 9.942 1.00 1.72 ATOM 220 NZ LYS 13 4.869 -1.113 10.866 1.00 1.72 ATOM 224 C LYS 13 6.762 3.482 5.200 1.00 1.72 ATOM 225 O LYS 13 7.408 4.420 5.680 1.00 1.72 ATOM 226 N LYS 14 7.012 3.007 3.979 1.00 1.66 ATOM 228 CA LYS 14 7.991 3.599 3.058 1.00 1.66 ATOM 230 CB LYS 14 8.241 2.626 1.886 1.00 1.66 ATOM 233 CG LYS 14 9.133 1.452 2.329 1.00 1.66 ATOM 236 CD LYS 14 9.224 0.331 1.281 1.00 1.66 ATOM 239 CE LYS 14 10.295 -0.686 1.709 1.00 1.66 ATOM 242 NZ LYS 14 10.402 -1.827 0.769 1.00 1.66 ATOM 246 C LYS 14 7.571 4.991 2.590 1.00 1.66 ATOM 247 O LYS 14 8.387 5.905 2.693 1.00 1.66 ATOM 248 N PHE 15 6.311 5.177 2.190 1.00 1.56 ATOM 250 CA PHE 15 5.853 6.459 1.640 1.00 1.56 ATOM 252 CB PHE 15 4.597 6.241 0.778 1.00 1.56 ATOM 255 CG PHE 15 4.925 6.022 -0.685 1.00 1.56 ATOM 256 CD1 PHE 15 5.656 4.892 -1.096 1.00 1.56 ATOM 258 CE1 PHE 15 6.031 4.744 -2.444 1.00 1.56 ATOM 260 CZ PHE 15 5.633 5.696 -3.397 1.00 1.56 ATOM 262 CE2 PHE 15 4.889 6.819 -2.993 1.00 1.56 ATOM 264 CD2 PHE 15 4.550 6.991 -1.639 1.00 1.56 ATOM 266 C PHE 15 5.660 7.566 2.692 1.00 1.56 ATOM 267 O PHE 15 6.077 8.703 2.470 1.00 1.56 ATOM 268 N LYS 16 5.104 7.217 3.858 1.00 2.01 ATOM 270 CA LYS 16 4.440 8.123 4.826 1.00 2.01 ATOM 272 CB LYS 16 5.444 9.038 5.561 1.00 2.01 ATOM 275 CG LYS 16 6.685 8.328 6.131 1.00 2.01 ATOM 278 CD LYS 16 7.965 8.816 5.436 1.00 2.01 ATOM 281 CE LYS 16 9.190 7.993 5.839 1.00 2.01 ATOM 284 NZ LYS 16 9.127 6.632 5.258 1.00 2.01 ATOM 288 C LYS 16 3.319 8.967 4.200 1.00 2.01 ATOM 289 O LYS 16 3.193 9.057 2.991 1.00 2.01 ATOM 290 N ASN 17 2.485 9.579 5.045 1.00 1.90 ATOM 292 CA ASN 17 1.360 10.456 4.671 1.00 1.90 ATOM 294 CB ASN 17 1.847 11.927 4.676 1.00 1.90 ATOM 297 CG ASN 17 2.363 12.394 6.034 1.00 1.90 ATOM 298 OD1 ASN 17 2.554 11.625 6.964 1.00 1.90 ATOM 299 ND2 ASN 17 2.614 13.671 6.213 1.00 1.90 ATOM 302 C ASN 17 0.609 10.017 3.393 1.00 1.90 ATOM 303 O ASN 17 0.405 10.780 2.451 1.00 1.90 ATOM 304 N CYS 18 0.250 8.732 3.370 1.00 1.56 ATOM 306 CA CYS 18 -0.220 7.998 2.203 1.00 1.56 ATOM 308 CB CYS 18 0.947 7.179 1.638 1.00 1.56 ATOM 311 SG CYS 18 1.691 6.148 2.934 1.00 1.56 ATOM 313 C CYS 18 -1.413 7.118 2.593 1.00 1.56 ATOM 314 O CYS 18 -1.400 6.398 3.601 1.00 1.56 ATOM 315 N GLU 19 -2.458 7.138 1.777 1.00 1.32 ATOM 317 CA GLU 19 -3.335 5.985 1.677 1.00 1.32 ATOM 319 CB GLU 19 -4.724 6.376 1.128 1.00 1.32 ATOM 322 CG GLU 19 -5.781 5.351 1.582 1.00 1.32 ATOM 325 CD GLU 19 -7.139 5.539 0.903 1.00 1.32 ATOM 326 OE1 GLU 19 -7.220 5.407 -0.339 1.00 1.32 ATOM 327 OE2 GLU 19 -8.170 5.723 1.580 1.00 1.32 ATOM 328 C GLU 19 -2.672 4.924 0.792 1.00 1.32 ATOM 329 O GLU 19 -1.964 5.248 -0.166 1.00 1.32 ATOM 330 N VAL 20 -2.941 3.663 1.108 1.00 1.24 ATOM 332 CA VAL 20 -2.584 2.521 0.274 1.00 1.24 ATOM 334 CB VAL 20 -1.299 1.827 0.765 1.00 1.24 ATOM 336 CG1 VAL 20 -0.802 0.825 -0.283 1.00 1.24 ATOM 340 CG2 VAL 20 -0.141 2.803 1.012 1.00 1.24 ATOM 344 C VAL 20 -3.774 1.564 0.270 1.00 1.24 ATOM 345 O VAL 20 -4.348 1.289 1.325 1.00 1.24 ATOM 346 N ARG 21 -4.170 1.101 -0.917 1.00 1.43 ATOM 348 CA ARG 21 -5.332 0.226 -1.111 1.00 1.43 ATOM 350 CB ARG 21 -6.539 0.980 -1.694 1.00 1.43 ATOM 353 CG ARG 21 -7.180 1.938 -0.677 1.00 1.43 ATOM 356 CD ARG 21 -8.580 2.369 -1.133 1.00 1.43 ATOM 359 NE ARG 21 -9.138 3.396 -0.232 1.00 1.43 ATOM 361 CZ ARG 21 -10.299 3.456 0.388 1.00 1.43 ATOM 362 NH1 ARG 21 -10.560 4.458 1.176 1.00 1.43 ATOM 365 NH2 ARG 21 -11.211 2.533 0.251 1.00 1.43 ATOM 368 C ARG 21 -4.957 -0.961 -1.988 1.00 1.43 ATOM 369 O ARG 21 -4.724 -0.802 -3.180 1.00 1.43 ATOM 370 N CYS 22 -4.843 -2.130 -1.353 1.00 1.47 ATOM 372 CA CYS 22 -4.580 -3.412 -2.001 1.00 1.47 ATOM 374 CB CYS 22 -4.035 -4.410 -0.971 1.00 1.47 ATOM 377 SG CYS 22 -5.034 -4.425 0.553 1.00 1.47 ATOM 379 C CYS 22 -5.787 -3.972 -2.744 1.00 1.47 ATOM 380 O CYS 22 -6.921 -3.638 -2.408 1.00 1.47 ATOM 381 N ASP 23 -5.538 -4.855 -3.718 1.00 1.96 ATOM 383 CA ASP 23 -6.621 -5.717 -4.184 1.00 1.96 ATOM 385 CB ASP 23 -6.245 -6.220 -5.586 1.00 1.96 ATOM 388 CG ASP 23 -7.165 -7.264 -6.214 1.00 1.96 ATOM 389 OD1 ASP 23 -7.106 -7.354 -7.461 1.00 1.96 ATOM 390 OD2 ASP 23 -7.808 -8.049 -5.481 1.00 1.96 ATOM 391 C ASP 23 -6.812 -6.804 -3.115 1.00 1.96 ATOM 392 O ASP 23 -5.849 -7.350 -2.574 1.00 1.96 ATOM 393 N GLU 24 -8.055 -7.101 -2.754 1.00 2.79 ATOM 395 CA GLU 24 -8.371 -8.063 -1.692 1.00 2.79 ATOM 397 CB GLU 24 -9.904 -8.129 -1.528 1.00 2.79 ATOM 400 CG GLU 24 -10.526 -6.784 -1.111 1.00 2.79 ATOM 403 CD GLU 24 -9.936 -6.316 0.220 1.00 2.79 ATOM 404 OE1 GLU 24 -9.118 -5.373 0.252 1.00 2.79 ATOM 405 OE2 GLU 24 -10.155 -7.008 1.238 1.00 2.79 ATOM 406 C GLU 24 -7.779 -9.457 -1.919 1.00 2.79 ATOM 407 O GLU 24 -7.543 -10.189 -0.954 1.00 2.79 ATOM 408 N SER 25 -7.482 -9.791 -3.176 1.00 3.13 ATOM 410 CA SER 25 -6.826 -11.026 -3.608 1.00 3.13 ATOM 412 CB SER 25 -7.778 -11.822 -4.513 1.00 3.13 ATOM 415 OG SER 25 -8.958 -12.130 -3.802 1.00 3.13 ATOM 417 C SER 25 -5.492 -10.801 -4.319 1.00 3.13 ATOM 418 O SER 25 -4.917 -11.763 -4.826 1.00 3.13 ATOM 419 N ASN 26 -4.981 -9.562 -4.370 1.00 4.28 ATOM 421 CA ASN 26 -3.823 -9.246 -5.194 1.00 4.28 ATOM 423 CB ASN 26 -4.294 -9.151 -6.661 1.00 4.28 ATOM 426 CG ASN 26 -3.627 -8.113 -7.532 1.00 4.28 ATOM 427 OD1 ASN 26 -2.408 -8.013 -7.586 1.00 4.28 ATOM 428 ND2 ASN 26 -4.395 -7.350 -8.265 1.00 4.28 ATOM 431 C ASN 26 -2.920 -8.131 -4.630 1.00 4.28 ATOM 432 O ASN 26 -3.331 -7.067 -4.162 1.00 4.28 ATOM 433 N HIS 27 -1.626 -8.475 -4.686 1.00 2.54 ATOM 435 CA HIS 27 -0.466 -7.711 -4.231 1.00 2.54 ATOM 437 CB HIS 27 0.795 -8.549 -4.458 1.00 2.54 ATOM 440 CG HIS 27 0.906 -9.735 -3.543 1.00 2.54 ATOM 441 ND1 HIS 27 1.061 -9.663 -2.160 1.00 2.54 ATOM 442 CE1 HIS 27 1.186 -10.936 -1.746 1.00 2.54 ATOM 444 NE2 HIS 27 1.132 -11.779 -2.790 1.00 2.54 ATOM 446 CD2 HIS 27 0.960 -11.038 -3.934 1.00 2.54 ATOM 448 C HIS 27 -0.271 -6.353 -4.912 1.00 2.54 ATOM 449 O HIS 27 0.543 -5.550 -4.451 1.00 2.54 ATOM 450 N CYS 28 -0.953 -6.102 -6.024 1.00 2.11 ATOM 452 CA CYS 28 -1.067 -4.766 -6.573 1.00 2.11 ATOM 454 CB CYS 28 -1.747 -4.859 -7.945 1.00 2.11 ATOM 457 SG CYS 28 -1.508 -3.312 -8.869 1.00 2.11 ATOM 459 C CYS 28 -1.860 -3.866 -5.614 1.00 2.11 ATOM 460 O CYS 28 -2.850 -4.275 -4.994 1.00 2.11 ATOM 461 N VAL 29 -1.422 -2.617 -5.521 1.00 1.97 ATOM 463 CA VAL 29 -2.002 -1.586 -4.684 1.00 1.97 ATOM 465 CB VAL 29 -1.304 -1.480 -3.296 1.00 1.97 ATOM 467 CG1 VAL 29 -0.986 -2.835 -2.631 1.00 1.97 ATOM 471 CG2 VAL 29 0.040 -0.740 -3.304 1.00 1.97 ATOM 475 C VAL 29 -1.989 -0.249 -5.422 1.00 1.97 ATOM 476 O VAL 29 -1.023 0.096 -6.108 1.00 1.97 ATOM 477 N GLU 30 -3.031 0.561 -5.244 1.00 1.23 ATOM 479 CA GLU 30 -2.854 2.001 -5.439 1.00 1.23 ATOM 481 CB GLU 30 -4.213 2.708 -5.639 1.00 1.23 ATOM 484 CG GLU 30 -4.024 4.231 -5.765 1.00 1.23 ATOM 487 CD GLU 30 -5.278 4.982 -6.217 1.00 1.23 ATOM 488 OE1 GLU 30 -5.718 4.812 -7.376 1.00 1.23 ATOM 489 OE2 GLU 30 -5.789 5.842 -5.454 1.00 1.23 ATOM 490 C GLU 30 -2.114 2.579 -4.214 1.00 1.23 ATOM 491 O GLU 30 -2.481 2.273 -3.078 1.00 1.23 ATOM 492 N VAL 31 -1.153 3.489 -4.426 1.00 1.20 ATOM 494 CA VAL 31 -0.787 4.503 -3.422 1.00 1.20 ATOM 496 CB VAL 31 0.737 4.634 -3.166 1.00 1.20 ATOM 498 CG1 VAL 31 1.056 5.549 -1.972 1.00 1.20 ATOM 502 CG2 VAL 31 1.398 3.280 -2.895 1.00 1.20 ATOM 506 C VAL 31 -1.359 5.855 -3.828 1.00 1.20 ATOM 507 O VAL 31 -1.357 6.233 -5.001 1.00 1.20 ATOM 508 N ARG 32 -1.792 6.619 -2.826 1.00 1.22 ATOM 510 CA ARG 32 -2.210 8.010 -2.973 1.00 1.22 ATOM 512 CB ARG 32 -3.740 8.072 -2.945 1.00 1.22 ATOM 515 CG ARG 32 -4.305 9.348 -3.600 1.00 1.22 ATOM 518 CD ARG 32 -5.844 9.409 -3.632 1.00 1.22 ATOM 521 NE ARG 32 -6.465 8.075 -3.820 1.00 1.22 ATOM 523 CZ ARG 32 -6.923 7.324 -2.840 1.00 1.22 ATOM 524 NH1 ARG 32 -6.980 6.042 -2.996 1.00 1.22 ATOM 527 NH2 ARG 32 -7.280 7.788 -1.679 1.00 1.22 ATOM 530 C ARG 32 -1.552 8.836 -1.882 1.00 1.22 ATOM 531 O ARG 32 -1.746 8.567 -0.700 1.00 1.22 ATOM 532 N CYS 33 -0.689 9.764 -2.270 1.00 1.60 ATOM 534 CA CYS 33 0.256 10.403 -1.355 1.00 1.60 ATOM 536 CB CYS 33 1.524 9.547 -1.273 1.00 1.60 ATOM 539 SG CYS 33 2.659 10.233 -0.031 1.00 1.60 ATOM 541 C CYS 33 0.567 11.818 -1.838 1.00 1.60 ATOM 542 O CYS 33 0.691 12.047 -3.040 1.00 1.60 ATOM 543 N SER 34 0.647 12.747 -0.877 1.00 2.11 ATOM 545 CA SER 34 0.711 14.194 -1.109 1.00 2.11 ATOM 547 CB SER 34 2.167 14.678 -1.218 1.00 2.11 ATOM 550 OG SER 34 2.783 14.234 -2.406 1.00 2.11 ATOM 552 C SER 34 -0.174 14.675 -2.278 1.00 2.11 ATOM 553 O SER 34 0.306 15.320 -3.212 1.00 2.11 ATOM 554 N ASP 35 -1.444 14.259 -2.256 1.00 3.43 ATOM 556 CA ASP 35 -2.526 14.492 -3.237 1.00 3.43 ATOM 558 CB ASP 35 -3.145 15.876 -2.983 1.00 3.43 ATOM 561 CG ASP 35 -3.547 16.024 -1.502 1.00 3.43 ATOM 562 OD1 ASP 35 -3.426 17.148 -0.975 1.00 3.43 ATOM 563 OD2 ASP 35 -3.918 14.991 -0.890 1.00 3.43 ATOM 564 C ASP 35 -2.246 14.103 -4.701 1.00 3.43 ATOM 565 O ASP 35 -3.089 14.264 -5.583 1.00 3.43 ATOM 566 N THR 36 -1.111 13.447 -4.942 1.00 2.19 ATOM 568 CA THR 36 -0.795 12.706 -6.167 1.00 2.19 ATOM 570 CB THR 36 0.666 12.914 -6.600 1.00 2.19 ATOM 572 CG2 THR 36 1.096 14.379 -6.659 1.00 2.19 ATOM 576 OG1 THR 36 1.569 12.225 -5.772 1.00 2.19 ATOM 578 C THR 36 -1.133 11.216 -6.010 1.00 2.19 ATOM 579 O THR 36 -1.581 10.753 -4.959 1.00 2.19 ATOM 580 N LYS 37 -0.896 10.436 -7.069 1.00 2.62 ATOM 582 CA LYS 37 -0.982 8.973 -7.046 1.00 2.62 ATOM 584 CB LYS 37 -2.111 8.472 -7.968 1.00 2.62 ATOM 587 CG LYS 37 -3.508 8.642 -7.363 1.00 2.62 ATOM 590 CD LYS 37 -4.576 8.009 -8.269 1.00 2.62 ATOM 593 CE LYS 37 -5.953 8.109 -7.606 1.00 2.62 ATOM 596 NZ LYS 37 -6.888 7.093 -8.142 1.00 2.62 ATOM 600 C LYS 37 0.337 8.363 -7.500 1.00 2.62 ATOM 601 O LYS 37 1.006 8.917 -8.369 1.00 2.62 ATOM 602 N TYR 38 0.643 7.186 -6.962 1.00 1.89 ATOM 604 CA TYR 38 1.746 6.339 -7.394 1.00 1.89 ATOM 606 CB TYR 38 3.001 6.623 -6.551 1.00 1.89 ATOM 609 CG TYR 38 4.280 6.178 -7.236 1.00 1.89 ATOM 610 CD1 TYR 38 5.117 7.129 -7.854 1.00 1.89 ATOM 612 CE1 TYR 38 6.269 6.712 -8.550 1.00 1.89 ATOM 614 CZ TYR 38 6.584 5.340 -8.641 1.00 1.89 ATOM 615 OH TYR 38 7.684 4.944 -9.331 1.00 1.89 ATOM 617 CE2 TYR 38 5.749 4.389 -8.016 1.00 1.89 ATOM 619 CD2 TYR 38 4.606 4.812 -7.309 1.00 1.89 ATOM 621 C TYR 38 1.321 4.869 -7.326 1.00 1.89 ATOM 622 O TYR 38 1.023 4.358 -6.251 1.00 1.89 ATOM 623 N THR 39 1.221 4.167 -8.450 1.00 2.00 ATOM 625 CA THR 39 0.813 2.751 -8.421 1.00 2.00 ATOM 627 CB THR 39 0.352 2.279 -9.807 1.00 2.00 ATOM 629 CG2 THR 39 -0.348 0.921 -9.765 1.00 2.00 ATOM 633 OG1 THR 39 -0.588 3.195 -10.327 1.00 2.00 ATOM 635 C THR 39 1.967 1.873 -7.949 1.00 2.00 ATOM 636 O THR 39 3.100 2.076 -8.392 1.00 2.00 ATOM 637 N LEU 40 1.709 0.871 -7.098 1.00 2.31 ATOM 639 CA LEU 40 2.744 -0.055 -6.637 1.00 2.31 ATOM 641 CB LEU 40 3.161 0.238 -5.187 1.00 2.31 ATOM 644 CG LEU 40 4.046 1.481 -5.004 1.00 2.31 ATOM 646 CD1 LEU 40 4.439 1.584 -3.534 1.00 2.31 ATOM 650 CD2 LEU 40 5.357 1.428 -5.793 1.00 2.31 ATOM 654 C LEU 40 2.337 -1.511 -6.814 1.00 2.31 ATOM 655 O LEU 40 1.252 -1.939 -6.448 1.00 2.31 ATOM 656 N CYS 41 3.249 -2.321 -7.342 1.00 3.27 ATOM 658 CA CYS 41 3.052 -3.760 -7.423 1.00 3.27 ATOM 660 CB CYS 41 4.187 -4.372 -8.257 1.00 3.27 ATOM 663 SG CYS 41 4.149 -3.691 -9.940 1.00 3.27 ATOM 665 C CYS 41 2.994 -4.385 -6.010 1.00 3.27 ATOM 666 O CYS 41 3.100 -3.751 -4.960 1.00 3.27 TER END