####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 334), selected 41 , name T0955TS157_3 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS157_3.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 27 15 - 41 5.00 11.69 LCS_AVERAGE: 60.98 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 2 - 18 1.60 14.43 LCS_AVERAGE: 30.64 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 2 - 16 0.77 14.25 LCS_AVERAGE: 22.61 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 16 21 0 3 3 3 8 10 13 17 18 19 21 22 23 24 26 26 28 28 29 30 LCS_GDT Q 2 Q 2 15 17 21 8 13 14 16 16 16 18 19 21 22 22 23 24 25 26 26 28 28 30 30 LCS_GDT E 3 E 3 15 17 21 8 13 14 16 16 16 18 19 21 22 22 23 24 25 26 26 28 28 30 32 LCS_GDT T 4 T 4 15 17 21 8 13 14 16 16 16 18 19 21 22 22 23 24 25 26 26 28 28 30 32 LCS_GDT R 5 R 5 15 17 21 9 13 14 16 16 16 18 19 21 22 22 23 24 25 26 26 28 28 30 31 LCS_GDT K 6 K 6 15 17 21 9 13 14 16 16 16 18 19 21 22 22 23 24 25 26 26 28 28 30 32 LCS_GDT K 7 K 7 15 17 21 9 13 14 16 16 16 18 19 21 22 22 23 24 25 26 27 29 31 32 34 LCS_GDT C 8 C 8 15 17 21 9 13 14 16 16 16 18 19 21 22 22 23 24 25 26 27 29 31 32 34 LCS_GDT T 9 T 9 15 17 21 9 13 14 16 16 16 18 19 21 22 22 23 24 25 26 27 29 31 32 34 LCS_GDT E 10 E 10 15 17 21 9 13 14 16 16 16 18 19 21 22 22 23 24 25 26 27 29 31 32 34 LCS_GDT M 11 M 11 15 17 21 9 13 14 16 16 16 18 19 21 22 22 24 26 27 28 29 29 31 32 34 LCS_GDT K 12 K 12 15 17 21 9 13 14 16 16 16 18 19 21 22 22 24 26 27 28 29 29 31 32 34 LCS_GDT K 13 K 13 15 17 21 9 13 14 16 16 16 18 19 21 22 22 23 24 25 26 27 29 31 32 34 LCS_GDT K 14 K 14 15 17 23 7 13 14 16 16 16 18 19 21 22 22 23 24 25 26 26 28 31 32 34 LCS_GDT F 15 F 15 15 17 27 3 9 14 16 16 16 18 19 21 22 22 23 24 26 28 29 29 31 32 34 LCS_GDT K 16 K 16 15 17 27 3 5 14 16 16 16 18 19 21 22 22 24 26 27 28 29 29 31 32 34 LCS_GDT N 17 N 17 4 17 27 3 4 4 7 8 9 12 14 17 19 20 23 26 27 28 29 29 29 32 34 LCS_GDT C 18 C 18 4 17 27 3 4 7 16 16 16 17 18 19 22 22 23 24 25 28 29 29 29 31 32 LCS_GDT E 19 E 19 6 9 27 4 6 6 7 8 16 18 19 21 22 22 23 24 27 28 29 29 31 32 34 LCS_GDT V 20 V 20 6 9 27 4 6 6 6 7 8 14 18 21 22 22 24 26 27 28 29 29 31 32 34 LCS_GDT R 21 R 21 6 9 27 4 6 6 7 8 9 13 15 18 18 21 24 26 27 28 29 29 31 32 34 LCS_GDT C 22 C 22 6 9 27 4 6 6 7 8 9 13 15 18 18 21 24 26 27 28 29 29 31 32 34 LCS_GDT D 23 D 23 6 9 27 3 6 6 6 8 9 13 15 18 18 21 24 26 27 28 29 29 31 32 34 LCS_GDT E 24 E 24 6 9 27 3 6 6 7 8 9 13 15 18 18 21 24 26 27 28 29 29 31 32 34 LCS_GDT S 25 S 25 3 10 27 3 3 4 5 7 9 13 15 18 18 21 24 26 27 28 29 29 31 32 34 LCS_GDT N 26 N 26 8 11 27 3 3 7 8 10 11 13 15 18 18 21 24 26 27 28 29 29 31 32 34 LCS_GDT H 27 H 27 8 11 27 5 7 8 10 10 11 13 15 18 18 21 24 26 27 28 29 29 31 32 34 LCS_GDT C 28 C 28 8 11 27 5 7 8 10 10 11 13 15 18 18 21 24 26 27 28 29 29 31 32 34 LCS_GDT V 29 V 29 8 11 27 5 7 8 10 10 11 13 16 18 18 21 24 26 27 28 29 29 31 32 34 LCS_GDT E 30 E 30 8 11 27 4 7 8 10 10 12 18 19 21 22 22 24 26 27 28 29 29 31 32 34 LCS_GDT V 31 V 31 8 11 27 5 7 8 10 10 11 15 19 21 22 22 24 26 27 28 29 29 31 32 34 LCS_GDT R 32 R 32 8 11 27 3 7 8 10 10 11 13 15 18 18 21 24 26 27 28 29 29 31 32 34 LCS_GDT C 33 C 33 8 11 27 5 7 8 10 10 11 13 15 18 18 21 24 26 27 28 29 29 31 32 34 LCS_GDT S 34 S 34 8 11 27 3 4 8 10 10 11 11 15 18 18 21 24 26 27 28 29 29 31 32 34 LCS_GDT D 35 D 35 4 11 27 3 3 7 10 10 11 11 15 18 18 21 24 26 27 28 29 29 31 32 34 LCS_GDT T 36 T 36 4 11 27 3 5 7 10 10 11 11 14 18 18 21 24 26 27 28 29 29 31 32 34 LCS_GDT K 37 K 37 5 5 27 4 7 7 7 7 7 11 14 16 18 21 24 26 27 28 29 29 31 32 34 LCS_GDT Y 38 Y 38 5 5 27 4 7 7 7 7 7 11 14 16 18 21 24 26 27 28 29 29 31 32 34 LCS_GDT T 39 T 39 5 5 27 4 7 7 7 7 9 12 19 21 22 22 24 26 27 28 29 29 31 32 34 LCS_GDT L 40 L 40 5 5 27 4 7 7 12 16 16 18 19 21 22 22 24 26 27 28 29 29 31 32 34 LCS_GDT C 41 C 41 5 5 27 3 7 7 7 7 12 13 16 17 19 21 24 26 27 28 29 29 31 32 34 LCS_AVERAGE LCS_A: 38.07 ( 22.61 30.64 60.98 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 13 14 16 16 16 18 19 21 22 22 24 26 27 28 29 29 31 32 34 GDT PERCENT_AT 21.95 31.71 34.15 39.02 39.02 39.02 43.90 46.34 51.22 53.66 53.66 58.54 63.41 65.85 68.29 70.73 70.73 75.61 78.05 82.93 GDT RMS_LOCAL 0.35 0.55 0.64 0.99 0.99 0.99 2.27 2.47 2.79 2.95 2.95 4.39 4.69 4.81 4.97 5.11 5.11 5.89 5.93 6.33 GDT RMS_ALL_AT 14.25 14.29 14.31 14.19 14.19 14.19 11.96 11.77 11.50 11.65 11.65 10.84 11.09 11.17 11.34 11.36 11.36 9.90 10.54 10.08 # Checking swapping # possible swapping detected: E 10 E 10 # possible swapping detected: F 15 F 15 # possible swapping detected: D 23 D 23 # possible swapping detected: E 24 E 24 # possible swapping detected: E 30 E 30 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 6.629 0 0.069 0.128 9.545 8.182 5.455 9.545 LGA Q 2 Q 2 1.749 0 0.662 1.350 5.060 48.182 43.434 1.878 LGA E 3 E 3 1.741 0 0.019 1.420 3.367 54.545 40.808 2.925 LGA T 4 T 4 2.661 0 0.046 1.105 3.708 35.455 25.974 3.708 LGA R 5 R 5 2.056 0 0.031 1.018 8.086 51.364 22.810 8.086 LGA K 6 K 6 1.271 0 0.041 1.243 5.151 65.909 43.838 5.151 LGA K 7 K 7 1.873 0 0.032 0.662 5.739 58.182 31.717 5.739 LGA C 8 C 8 1.260 0 0.077 0.758 2.580 73.636 62.121 2.580 LGA T 9 T 9 1.485 0 0.075 0.137 3.323 62.273 47.532 2.551 LGA E 10 E 10 2.459 0 0.057 1.022 3.207 38.636 43.030 1.413 LGA M 11 M 11 2.087 0 0.020 1.423 10.137 51.364 29.091 10.137 LGA K 12 K 12 1.040 0 0.017 0.962 2.671 73.636 57.172 1.512 LGA K 13 K 13 2.062 0 0.049 0.582 7.052 48.182 27.273 7.052 LGA K 14 K 14 2.539 0 0.191 0.957 11.890 45.000 21.212 11.890 LGA F 15 F 15 2.392 0 0.472 0.567 7.365 35.455 14.545 6.851 LGA K 16 K 16 2.058 0 0.538 1.021 5.022 35.455 20.202 5.022 LGA N 17 N 17 7.259 0 0.065 0.373 11.088 0.000 0.000 11.088 LGA C 18 C 18 4.939 0 0.018 0.066 8.260 14.545 9.697 8.260 LGA E 19 E 19 3.070 0 0.550 0.918 6.945 35.000 16.162 6.945 LGA V 20 V 20 4.575 0 0.156 1.105 7.651 10.000 5.714 7.158 LGA R 21 R 21 9.873 0 0.071 1.516 17.941 0.000 0.000 17.941 LGA C 22 C 22 16.407 0 0.039 0.761 18.159 0.000 0.000 16.775 LGA D 23 D 23 22.221 0 0.272 1.061 25.415 0.000 0.000 23.194 LGA E 24 E 24 28.316 0 0.415 0.547 34.451 0.000 0.000 34.451 LGA S 25 S 25 25.852 0 0.376 0.372 26.662 0.000 0.000 26.662 LGA N 26 N 26 22.344 0 0.199 1.175 23.355 0.000 0.000 22.356 LGA H 27 H 27 20.096 0 0.486 0.946 21.359 0.000 0.000 20.958 LGA C 28 C 28 13.534 0 0.052 0.721 15.845 0.000 0.000 13.273 LGA V 29 V 29 7.978 0 0.066 1.098 9.959 0.000 0.000 7.160 LGA E 30 E 30 4.701 0 0.009 0.612 10.411 2.273 1.010 10.411 LGA V 31 V 31 4.553 0 0.069 0.128 7.318 3.182 8.052 6.044 LGA R 32 R 32 11.131 0 0.074 1.252 17.989 0.000 0.000 17.989 LGA C 33 C 33 15.193 0 0.494 0.565 18.646 0.000 0.000 12.781 LGA S 34 S 34 22.040 0 0.466 0.448 24.270 0.000 0.000 24.270 LGA D 35 D 35 20.691 0 0.481 0.867 22.895 0.000 0.000 22.895 LGA T 36 T 36 14.198 0 0.633 1.000 16.215 0.000 0.000 14.653 LGA K 37 K 37 16.177 0 0.630 1.552 24.476 0.000 0.000 24.476 LGA Y 38 Y 38 10.337 0 0.016 1.184 16.223 0.000 0.000 16.223 LGA T 39 T 39 6.272 0 0.147 0.159 10.169 7.273 4.156 10.169 LGA L 40 L 40 2.374 0 0.180 0.942 6.500 16.818 19.545 3.853 LGA C 41 C 41 7.938 1 0.485 0.586 9.318 0.000 0.000 8.052 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 334 99.70 41 41 SUMMARY(RMSD_GDC): 8.825 8.608 9.643 21.330 14.648 6.608 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 19 2.47 46.951 42.704 0.738 LGA_LOCAL RMSD: 2.475 Number of atoms: 19 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 11.770 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 8.825 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.081708 * X + 0.879427 * Y + -0.468969 * Z + 2.964939 Y_new = 0.907545 * X + -0.260131 * Y + -0.329686 * Z + 1.665731 Z_new = -0.411928 * X + -0.398673 * Y + -0.819375 * Z + -0.186097 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.481006 0.424569 -2.688757 [DEG: 84.8554 24.3260 -154.0544 ] ZXZ: -0.958059 2.531116 -2.339843 [DEG: -54.8927 145.0222 -134.0631 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS157_3 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS157_3.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 19 2.47 42.704 8.82 REMARK ---------------------------------------------------------- MOLECULE T0955TS157_3 PFRMAT TS TARGET T0955 MODEL 3 PARENT N/A ATOM 1 N SER 1 1.518 -16.134 6.408 1.00 0.00 N ATOM 2 CA SER 1 1.636 -14.819 5.811 1.00 0.00 C ATOM 3 C SER 1 0.827 -14.663 4.532 1.00 0.00 C ATOM 4 O SER 1 0.611 -15.632 3.808 1.00 0.00 O ATOM 5 CB SER 1 3.102 -14.496 5.511 1.00 0.00 C ATOM 6 OG SER 1 3.865 -14.433 6.704 1.00 0.00 O ATOM 7 N GLN 2 0.376 -13.437 4.251 1.00 0.85 N ATOM 8 CA GLN 2 -0.413 -13.144 3.071 1.00 0.85 C ATOM 9 C GLN 2 0.342 -12.114 2.244 1.00 0.85 C ATOM 10 O GLN 2 1.078 -11.294 2.788 1.00 0.85 O ATOM 11 CB GLN 2 -1.804 -12.643 3.467 1.00 0.85 C ATOM 12 CD GLN 2 -4.023 -13.147 4.562 1.00 0.85 C ATOM 13 CG GLN 2 -2.640 -13.664 4.221 1.00 0.85 C ATOM 14 OE1 GLN 2 -4.178 -12.010 5.008 1.00 0.85 O ATOM 15 NE2 GLN 2 -5.034 -13.982 4.353 1.00 0.85 N ATOM 16 N GLU 3 0.166 -12.150 0.920 1.00 0.12 N ATOM 17 CA GLU 3 0.767 -11.163 0.047 1.00 0.12 C ATOM 18 C GLU 3 0.201 -9.773 0.298 1.00 0.12 C ATOM 19 O GLU 3 0.895 -8.774 0.113 1.00 0.12 O ATOM 20 CB GLU 3 0.562 -11.549 -1.419 1.00 0.12 C ATOM 21 CD GLU 3 2.833 -12.608 -1.741 1.00 0.12 C ATOM 22 CG GLU 3 1.331 -12.788 -1.848 1.00 0.12 C ATOM 23 OE1 GLU 3 3.344 -11.580 -2.233 1.00 0.12 O ATOM 24 OE2 GLU 3 3.497 -13.495 -1.167 1.00 0.12 O ATOM 25 N THR 4 -1.064 -9.718 0.719 1.00 0.09 N ATOM 26 CA THR 4 -1.707 -8.440 0.948 1.00 0.09 C ATOM 27 C THR 4 -1.137 -7.709 2.155 1.00 0.09 C ATOM 28 O THR 4 -1.011 -6.487 2.143 1.00 0.09 O ATOM 29 CB THR 4 -3.226 -8.598 1.142 1.00 0.09 C ATOM 30 OG1 THR 4 -3.806 -9.166 -0.039 1.00 0.09 O ATOM 31 CG2 THR 4 -3.874 -7.247 1.401 1.00 0.09 C ATOM 32 N ARG 5 -0.791 -8.457 3.206 1.00 0.04 N ATOM 33 CA ARG 5 -0.239 -7.899 4.423 1.00 0.04 C ATOM 34 C ARG 5 1.128 -7.295 4.132 1.00 0.04 C ATOM 35 O ARG 5 1.521 -6.311 4.754 1.00 0.04 O ATOM 36 CB ARG 5 -0.142 -8.973 5.509 1.00 0.04 C ATOM 37 CD ARG 5 -1.318 -10.527 7.091 1.00 0.04 C ATOM 38 NE ARG 5 -2.600 -10.959 7.642 1.00 0.04 N ATOM 39 CG ARG 5 -1.486 -9.426 6.055 1.00 0.04 C ATOM 40 CZ ARG 5 -2.748 -11.985 8.474 1.00 0.04 C ATOM 41 NH1 ARG 5 -3.952 -12.306 8.925 1.00 0.04 N ATOM 42 NH2 ARG 5 -1.689 -12.688 8.854 1.00 0.04 N ATOM 43 N LYS 6 1.839 -7.900 3.178 1.00 0.03 N ATOM 44 CA LYS 6 3.131 -7.418 2.731 1.00 0.03 C ATOM 45 C LYS 6 2.992 -6.112 1.961 1.00 0.03 C ATOM 46 O LYS 6 3.812 -5.209 2.113 1.00 0.03 O ATOM 47 CB LYS 6 3.823 -8.469 1.861 1.00 0.03 C ATOM 48 CD LYS 6 4.957 -10.703 1.701 1.00 0.03 C ATOM 49 CE LYS 6 5.426 -11.930 2.466 1.00 0.03 C ATOM 50 CG LYS 6 4.291 -9.697 2.625 1.00 0.03 C ATOM 51 NZ LYS 6 6.042 -12.943 1.565 1.00 0.03 N ATOM 52 N LYS 7 1.953 -6.002 1.130 1.00 0.03 N ATOM 53 CA LYS 7 1.726 -4.787 0.375 1.00 0.03 C ATOM 54 C LYS 7 1.266 -3.662 1.291 1.00 0.03 C ATOM 55 O LYS 7 1.673 -2.514 1.122 1.00 0.03 O ATOM 56 CB LYS 7 0.693 -5.027 -0.729 1.00 0.03 C ATOM 57 CD LYS 7 0.115 -6.115 -2.915 1.00 0.03 C ATOM 58 CE LYS 7 0.614 -6.996 -4.050 1.00 0.03 C ATOM 59 CG LYS 7 1.192 -5.910 -1.863 1.00 0.03 C ATOM 60 NZ LYS 7 -0.445 -7.242 -5.068 1.00 0.03 N ATOM 61 N CYS 8 0.413 -3.983 2.266 1.00 0.02 N ATOM 62 CA CYS 8 -0.054 -2.983 3.205 1.00 0.02 C ATOM 63 C CYS 8 1.105 -2.416 4.011 1.00 0.02 C ATOM 64 O CYS 8 1.107 -1.237 4.357 1.00 0.02 O ATOM 65 CB CYS 8 -1.108 -3.579 4.141 1.00 0.02 C ATOM 66 SG CYS 8 -2.675 -3.989 3.336 1.00 0.02 S ATOM 67 N THR 9 2.095 -3.261 4.310 1.00 0.02 N ATOM 68 CA THR 9 3.252 -2.810 5.057 1.00 0.02 C ATOM 69 C THR 9 4.077 -1.819 4.247 1.00 0.02 C ATOM 70 O THR 9 4.723 -0.939 4.810 1.00 0.02 O ATOM 71 CB THR 9 4.146 -3.991 5.480 1.00 0.02 C ATOM 72 OG1 THR 9 3.403 -4.875 6.329 1.00 0.02 O ATOM 73 CG2 THR 9 5.362 -3.491 6.244 1.00 0.02 C ATOM 74 N GLU 10 4.077 -1.933 2.918 1.00 0.02 N ATOM 75 CA GLU 10 4.834 -1.014 2.090 1.00 0.02 C ATOM 76 C GLU 10 4.231 0.384 2.089 1.00 0.02 C ATOM 77 O GLU 10 4.953 1.374 2.002 1.00 0.02 O ATOM 78 CB GLU 10 4.923 -1.535 0.655 1.00 0.02 C ATOM 79 CD GLU 10 7.217 -2.566 0.880 1.00 0.02 C ATOM 80 CG GLU 10 5.766 -2.789 0.500 1.00 0.02 C ATOM 81 OE1 GLU 10 7.651 -1.395 0.908 1.00 0.02 O ATOM 82 OE2 GLU 10 7.921 -3.562 1.150 1.00 0.02 O ATOM 83 N MET 11 2.902 0.466 2.186 1.00 0.05 N ATOM 84 CA MET 11 2.223 1.743 2.263 1.00 0.05 C ATOM 85 C MET 11 2.503 2.407 3.604 1.00 0.05 C ATOM 86 O MET 11 2.546 3.631 3.697 1.00 0.05 O ATOM 87 CB MET 11 0.718 1.563 2.055 1.00 0.05 C ATOM 88 SD MET 11 -1.775 0.773 2.968 1.00 0.05 S ATOM 89 CE MET 11 -2.280 -0.017 4.494 1.00 0.05 C ATOM 90 CG MET 11 -0.001 0.938 3.240 1.00 0.05 C ATOM 91 N LYS 12 2.693 1.590 4.643 1.00 0.03 N ATOM 92 CA LYS 12 2.980 2.107 5.965 1.00 0.03 C ATOM 93 C LYS 12 4.339 2.792 6.012 1.00 0.03 C ATOM 94 O LYS 12 4.527 3.755 6.752 1.00 0.03 O ATOM 95 CB LYS 12 2.927 0.984 7.003 1.00 0.03 C ATOM 96 CD LYS 12 0.586 1.440 7.785 1.00 0.03 C ATOM 97 CE LYS 12 -0.768 0.829 8.106 1.00 0.03 C ATOM 98 CG LYS 12 1.539 0.402 7.216 1.00 0.03 C ATOM 99 NZ LYS 12 -1.717 1.837 8.654 1.00 0.03 N ATOM 100 N LYS 13 5.291 2.294 5.219 1.00 0.02 N ATOM 101 CA LYS 13 6.612 2.888 5.181 1.00 0.02 C ATOM 102 C LYS 13 6.561 4.269 4.541 1.00 0.02 C ATOM 103 O LYS 13 7.276 5.177 4.960 1.00 0.02 O ATOM 104 CB LYS 13 7.584 1.985 4.419 1.00 0.02 C ATOM 105 CD LYS 13 8.892 -0.155 4.331 1.00 0.02 C ATOM 106 CE LYS 13 9.245 -1.442 5.059 1.00 0.02 C ATOM 107 CG LYS 13 7.934 0.698 5.147 1.00 0.02 C ATOM 108 NZ LYS 13 10.148 -2.308 4.252 1.00 0.02 N ATOM 109 N LYS 14 5.714 4.433 3.523 1.00 0.05 N ATOM 110 CA LYS 14 5.610 5.724 2.875 1.00 0.05 C ATOM 111 C LYS 14 4.882 6.762 3.717 1.00 0.05 C ATOM 112 O LYS 14 5.503 7.681 4.246 1.00 0.05 O ATOM 113 CB LYS 14 4.898 5.591 1.527 1.00 0.05 C ATOM 114 CD LYS 14 4.133 6.678 -0.602 1.00 0.05 C ATOM 115 CE LYS 14 3.995 7.987 -1.364 1.00 0.05 C ATOM 116 CG LYS 14 4.780 6.896 0.756 1.00 0.05 C ATOM 117 NZ LYS 14 3.363 7.789 -2.697 1.00 0.05 N ATOM 118 N PHE 15 3.563 6.594 3.829 1.00 0.83 N ATOM 119 CA PHE 15 2.730 7.592 4.471 1.00 0.83 C ATOM 120 C PHE 15 2.154 7.058 5.775 1.00 0.83 C ATOM 121 O PHE 15 2.079 5.847 5.974 1.00 0.83 O ATOM 122 CB PHE 15 1.602 8.030 3.535 1.00 0.83 C ATOM 123 CG PHE 15 2.078 8.756 2.309 1.00 0.83 C ATOM 124 CZ PHE 15 2.955 10.099 0.038 1.00 0.83 C ATOM 125 CD1 PHE 15 3.402 9.140 2.185 1.00 0.83 C ATOM 126 CE1 PHE 15 3.841 9.807 1.057 1.00 0.83 C ATOM 127 CD2 PHE 15 1.203 9.055 1.280 1.00 0.83 C ATOM 128 CE2 PHE 15 1.642 9.722 0.152 1.00 0.83 C ATOM 129 N LYS 16 1.750 7.969 6.661 1.00 0.30 N ATOM 130 CA LYS 16 1.167 7.611 7.939 1.00 0.30 C ATOM 131 C LYS 16 -0.135 6.841 7.768 1.00 0.30 C ATOM 132 O LYS 16 -1.201 7.440 7.642 1.00 0.30 O ATOM 133 CB LYS 16 0.921 8.861 8.785 1.00 0.30 C ATOM 134 CD LYS 16 0.236 9.851 10.987 1.00 0.30 C ATOM 135 CE LYS 16 -0.291 9.563 12.384 1.00 0.30 C ATOM 136 CG LYS 16 0.398 8.572 10.183 1.00 0.30 C ATOM 137 NZ LYS 16 -0.461 10.809 13.182 1.00 0.30 N ATOM 138 N ASN 17 -0.059 5.508 7.762 1.00 0.13 N ATOM 139 CA ASN 17 -1.160 4.573 7.655 1.00 0.13 C ATOM 140 C ASN 17 -1.821 4.564 6.285 1.00 0.13 C ATOM 141 O ASN 17 -2.180 3.507 5.770 1.00 0.13 O ATOM 142 CB ASN 17 -2.216 4.864 8.723 1.00 0.13 C ATOM 143 CG ASN 17 -1.689 4.670 10.132 1.00 0.13 C ATOM 144 OD1 ASN 17 -0.961 3.716 10.406 1.00 0.13 O ATOM 145 ND2 ASN 17 -2.057 5.576 11.030 1.00 0.13 N ATOM 146 N CYS 18 -1.986 5.747 5.687 1.00 0.07 N ATOM 147 CA CYS 18 -2.619 5.883 4.391 1.00 0.07 C ATOM 148 C CYS 18 -1.809 5.270 3.256 1.00 0.07 C ATOM 149 O CYS 18 -0.591 5.144 3.356 1.00 0.07 O ATOM 150 CB CYS 18 -2.877 7.357 4.072 1.00 0.07 C ATOM 151 SG CYS 18 -4.050 8.167 5.186 1.00 0.07 S ATOM 152 N GLU 19 -2.508 4.895 2.183 1.00 0.18 N ATOM 153 CA GLU 19 -1.841 4.338 1.023 1.00 0.18 C ATOM 154 C GLU 19 -1.919 5.157 -0.256 1.00 0.18 C ATOM 155 O GLU 19 -1.010 5.110 -1.082 1.00 0.18 O ATOM 156 CB GLU 19 -2.393 2.946 0.705 1.00 0.18 C ATOM 157 CD GLU 19 -4.374 1.545 0.008 1.00 0.18 C ATOM 158 CG GLU 19 -3.836 2.945 0.229 1.00 0.18 C ATOM 159 OE1 GLU 19 -3.562 0.599 -0.054 1.00 0.18 O ATOM 160 OE2 GLU 19 -5.610 1.395 -0.104 1.00 0.18 O ATOM 161 N VAL 20 -3.011 5.907 -0.417 1.00 0.15 N ATOM 162 CA VAL 20 -3.173 6.824 -1.527 1.00 0.15 C ATOM 163 C VAL 20 -3.298 8.256 -1.028 1.00 0.15 C ATOM 164 O VAL 20 -3.793 8.492 0.073 1.00 0.15 O ATOM 165 CB VAL 20 -4.396 6.457 -2.388 1.00 0.15 C ATOM 166 CG1 VAL 20 -4.223 5.073 -2.997 1.00 0.15 C ATOM 167 CG2 VAL 20 -5.670 6.523 -1.559 1.00 0.15 C ATOM 168 N ARG 21 -2.849 9.221 -1.833 1.00 0.21 N ATOM 169 CA ARG 21 -2.915 10.613 -1.434 1.00 0.21 C ATOM 170 C ARG 21 -3.637 11.366 -2.544 1.00 0.21 C ATOM 171 O ARG 21 -3.412 11.103 -3.723 1.00 0.21 O ATOM 172 CB ARG 21 -1.510 11.165 -1.181 1.00 0.21 C ATOM 173 CD ARG 21 -0.073 13.079 -0.425 1.00 0.21 C ATOM 174 NE ARG 21 0.419 12.447 0.797 1.00 0.21 N ATOM 175 CG ARG 21 -1.483 12.629 -0.771 1.00 0.21 C ATOM 176 CZ ARG 21 1.656 12.585 1.262 1.00 0.21 C ATOM 177 NH1 ARG 21 2.015 11.972 2.382 1.00 0.21 N ATOM 178 NH2 ARG 21 2.531 13.335 0.609 1.00 0.21 N ATOM 179 N CYS 22 -4.499 12.298 -2.135 1.00 0.66 N ATOM 180 CA CYS 22 -5.115 13.177 -3.109 1.00 0.66 C ATOM 181 C CYS 22 -5.115 14.617 -2.616 1.00 0.66 C ATOM 182 O CYS 22 -5.347 14.873 -1.436 1.00 0.66 O ATOM 183 CB CYS 22 -6.544 12.723 -3.413 1.00 0.66 C ATOM 184 SG CYS 22 -7.659 12.764 -1.990 1.00 0.66 S ATOM 185 N ASP 23 -4.852 15.554 -3.530 1.00 0.21 N ATOM 186 CA ASP 23 -4.879 16.958 -3.173 1.00 0.21 C ATOM 187 C ASP 23 -5.352 17.757 -4.379 1.00 0.21 C ATOM 188 O ASP 23 -4.631 17.880 -5.368 1.00 0.21 O ATOM 189 CB ASP 23 -3.498 17.419 -2.704 1.00 0.21 C ATOM 190 CG ASP 23 -3.495 18.857 -2.223 1.00 0.21 C ATOM 191 OD1 ASP 23 -4.528 19.540 -2.388 1.00 0.21 O ATOM 192 OD2 ASP 23 -2.460 19.300 -1.682 1.00 0.21 O ATOM 193 N GLU 24 -6.571 18.288 -4.266 1.00 0.05 N ATOM 194 CA GLU 24 -7.148 19.161 -5.269 1.00 0.05 C ATOM 195 C GLU 24 -7.636 18.377 -6.477 1.00 0.05 C ATOM 196 O GLU 24 -7.221 18.641 -7.603 1.00 0.05 O ATOM 197 CB GLU 24 -6.131 20.215 -5.710 1.00 0.05 C ATOM 198 CD GLU 24 -4.706 22.202 -5.078 1.00 0.05 C ATOM 199 CG GLU 24 -5.654 21.125 -4.590 1.00 0.05 C ATOM 200 OE1 GLU 24 -4.380 22.205 -6.284 1.00 0.05 O ATOM 201 OE2 GLU 24 -4.288 23.044 -4.254 1.00 0.05 O ATOM 202 N SER 25 -8.525 17.394 -6.303 1.00 0.06 N ATOM 203 CA SER 25 -9.052 16.520 -7.331 1.00 0.06 C ATOM 204 C SER 25 -7.998 15.677 -8.034 1.00 0.06 C ATOM 205 O SER 25 -8.145 15.346 -9.209 1.00 0.06 O ATOM 206 CB SER 25 -9.806 17.328 -8.388 1.00 0.06 C ATOM 207 OG SER 25 -10.910 18.010 -7.818 1.00 0.06 O ATOM 208 N ASN 26 -6.932 15.329 -7.309 1.00 0.07 N ATOM 209 CA ASN 26 -5.847 14.613 -7.949 1.00 0.07 C ATOM 210 C ASN 26 -5.467 13.291 -7.298 1.00 0.07 C ATOM 211 O ASN 26 -4.371 12.780 -7.516 1.00 0.07 O ATOM 212 CB ASN 26 -4.596 15.490 -8.022 1.00 0.07 C ATOM 213 CG ASN 26 -4.760 16.662 -8.970 1.00 0.07 C ATOM 214 OD1 ASN 26 -4.724 16.498 -10.189 1.00 0.07 O ATOM 215 ND2 ASN 26 -4.943 17.852 -8.409 1.00 0.07 N ATOM 216 N HIS 27 -6.389 12.748 -6.499 1.00 0.12 N ATOM 217 CA HIS 27 -6.195 11.485 -5.817 1.00 0.12 C ATOM 218 C HIS 27 -5.377 10.464 -6.595 1.00 0.12 C ATOM 219 O HIS 27 -5.574 10.293 -7.797 1.00 0.12 O ATOM 220 CB HIS 27 -7.544 10.851 -5.469 1.00 0.12 C ATOM 221 CG HIS 27 -7.434 9.624 -4.619 1.00 0.12 C ATOM 222 ND1 HIS 27 -7.084 8.393 -5.130 1.00 0.12 N ATOM 223 CE1 HIS 27 -7.069 7.492 -4.132 1.00 0.12 C ATOM 224 CD2 HIS 27 -7.617 9.318 -3.207 1.00 0.12 C ATOM 225 NE2 HIS 27 -7.387 8.040 -2.976 1.00 0.12 N ATOM 226 N CYS 28 -4.462 9.790 -5.896 1.00 0.21 N ATOM 227 CA CYS 28 -3.692 8.716 -6.491 1.00 0.21 C ATOM 228 C CYS 28 -2.945 7.987 -5.383 1.00 0.21 C ATOM 229 O CYS 28 -2.355 8.618 -4.510 1.00 0.21 O ATOM 230 CB CYS 28 -2.732 9.266 -7.548 1.00 0.21 C ATOM 231 SG CYS 28 -1.809 8.000 -8.449 1.00 0.21 S ATOM 232 N VAL 29 -2.982 6.654 -5.436 1.00 0.06 N ATOM 233 CA VAL 29 -2.329 5.828 -4.440 1.00 0.06 C ATOM 234 C VAL 29 -1.096 5.180 -5.052 1.00 0.06 C ATOM 235 O VAL 29 -1.175 4.563 -6.112 1.00 0.06 O ATOM 236 CB VAL 29 -3.284 4.758 -3.879 1.00 0.06 C ATOM 237 CG1 VAL 29 -3.806 3.870 -4.997 1.00 0.06 C ATOM 238 CG2 VAL 29 -2.586 3.925 -2.815 1.00 0.06 C ATOM 239 N GLU 30 0.069 5.299 -4.410 1.00 0.98 N ATOM 240 CA GLU 30 1.264 4.563 -4.770 1.00 0.98 C ATOM 241 C GLU 30 1.890 3.966 -3.518 1.00 0.98 C ATOM 242 O GLU 30 1.854 4.574 -2.451 1.00 0.98 O ATOM 243 CB GLU 30 2.257 5.475 -5.496 1.00 0.98 C ATOM 244 CD GLU 30 2.756 6.912 -7.511 1.00 0.98 C ATOM 245 CG GLU 30 1.746 6.018 -6.819 1.00 0.98 C ATOM 246 OE1 GLU 30 3.768 7.271 -6.871 1.00 0.98 O ATOM 247 OE2 GLU 30 2.538 7.254 -8.692 1.00 0.98 O ATOM 248 N VAL 31 2.463 2.768 -3.661 1.00 0.04 N ATOM 249 CA VAL 31 3.080 2.049 -2.565 1.00 0.04 C ATOM 250 C VAL 31 4.590 1.926 -2.711 1.00 0.04 C ATOM 251 O VAL 31 5.107 1.875 -3.825 1.00 0.04 O ATOM 252 CB VAL 31 2.482 0.638 -2.408 1.00 0.04 C ATOM 253 CG1 VAL 31 3.196 -0.123 -1.301 1.00 0.04 C ATOM 254 CG2 VAL 31 0.989 0.720 -2.126 1.00 0.04 C ATOM 255 N ARG 32 5.287 1.880 -1.573 1.00 0.09 N ATOM 256 CA ARG 32 6.728 1.739 -1.537 1.00 0.09 C ATOM 257 C ARG 32 7.037 0.357 -0.981 1.00 0.09 C ATOM 258 O ARG 32 6.973 0.143 0.228 1.00 0.09 O ATOM 259 CB ARG 32 7.355 2.852 -0.693 1.00 0.09 C ATOM 260 CD ARG 32 7.827 5.298 -0.395 1.00 0.09 C ATOM 261 NE ARG 32 7.615 6.650 -0.907 1.00 0.09 N ATOM 262 CG ARG 32 7.123 4.250 -1.241 1.00 0.09 C ATOM 263 CZ ARG 32 8.152 7.744 -0.376 1.00 0.09 C ATOM 264 NH1 ARG 32 7.902 8.931 -0.911 1.00 0.09 N ATOM 265 NH2 ARG 32 8.936 7.646 0.689 1.00 0.09 N ATOM 266 N CYS 33 7.366 -0.551 -1.901 1.00 0.23 N ATOM 267 CA CYS 33 7.622 -1.926 -1.525 1.00 0.23 C ATOM 268 C CYS 33 9.098 -2.277 -1.652 1.00 0.23 C ATOM 269 O CYS 33 9.797 -1.731 -2.504 1.00 0.23 O ATOM 270 CB CYS 33 6.787 -2.881 -2.381 1.00 0.23 C ATOM 271 SG CYS 33 5.000 -2.659 -2.218 1.00 0.23 S ATOM 272 N SER 34 9.529 -3.194 -0.783 1.00 0.26 N ATOM 273 CA SER 34 10.916 -3.588 -0.635 1.00 0.26 C ATOM 274 C SER 34 11.830 -2.383 -0.461 1.00 0.26 C ATOM 275 O SER 34 12.992 -2.420 -0.858 1.00 0.26 O ATOM 276 CB SER 34 11.371 -4.411 -1.842 1.00 0.26 C ATOM 277 OG SER 34 10.614 -5.602 -1.962 1.00 0.26 O ATOM 278 N ASP 35 11.279 -1.324 0.135 1.00 0.11 N ATOM 279 CA ASP 35 11.967 -0.075 0.391 1.00 0.11 C ATOM 280 C ASP 35 12.286 0.765 -0.837 1.00 0.11 C ATOM 281 O ASP 35 13.443 0.863 -1.242 1.00 0.11 O ATOM 282 CB ASP 35 13.281 -0.329 1.131 1.00 0.11 C ATOM 283 CG ASP 35 13.067 -0.904 2.518 1.00 0.11 C ATOM 284 OD1 ASP 35 12.008 -0.627 3.119 1.00 0.11 O ATOM 285 OD2 ASP 35 13.959 -1.631 3.004 1.00 0.11 O ATOM 286 N THR 36 11.285 1.388 -1.463 1.00 0.16 N ATOM 287 CA THR 36 11.417 2.159 -2.683 1.00 0.16 C ATOM 288 C THR 36 11.876 1.373 -3.902 1.00 0.16 C ATOM 289 O THR 36 11.758 1.847 -5.029 1.00 0.16 O ATOM 290 CB THR 36 12.400 3.332 -2.505 1.00 0.16 C ATOM 291 OG1 THR 36 13.746 2.843 -2.560 1.00 0.16 O ATOM 292 CG2 THR 36 12.184 4.010 -1.162 1.00 0.16 C ATOM 293 N LYS 37 12.402 0.165 -3.686 1.00 0.42 N ATOM 294 CA LYS 37 12.864 -0.663 -4.781 1.00 0.42 C ATOM 295 C LYS 37 11.748 -0.988 -5.765 1.00 0.42 C ATOM 296 O LYS 37 11.984 -1.078 -6.968 1.00 0.42 O ATOM 297 CB LYS 37 13.472 -1.962 -4.250 1.00 0.42 C ATOM 298 CD LYS 37 15.341 -3.106 -3.026 1.00 0.42 C ATOM 299 CE LYS 37 16.667 -2.922 -2.305 1.00 0.42 C ATOM 300 CG LYS 37 14.804 -1.781 -3.543 1.00 0.42 C ATOM 301 NZ LYS 37 17.182 -4.205 -1.755 1.00 0.42 N ATOM 302 N TYR 38 10.525 -1.169 -5.263 1.00 0.44 N ATOM 303 CA TYR 38 9.380 -1.466 -6.100 1.00 0.44 C ATOM 304 C TYR 38 8.351 -0.349 -6.012 1.00 0.44 C ATOM 305 O TYR 38 8.234 0.311 -4.981 1.00 0.44 O ATOM 306 CB TYR 38 8.753 -2.802 -5.697 1.00 0.44 C ATOM 307 CG TYR 38 9.661 -3.993 -5.906 1.00 0.44 C ATOM 308 OH TYR 38 12.166 -7.265 -6.465 1.00 0.44 O ATOM 309 CZ TYR 38 11.337 -6.183 -6.282 1.00 0.44 C ATOM 310 CD1 TYR 38 10.564 -4.380 -4.923 1.00 0.44 C ATOM 311 CE1 TYR 38 11.398 -5.467 -5.106 1.00 0.44 C ATOM 312 CD2 TYR 38 9.613 -4.726 -7.085 1.00 0.44 C ATOM 313 CE2 TYR 38 10.439 -5.815 -7.284 1.00 0.44 C ATOM 314 N THR 39 7.602 -0.136 -7.096 1.00 0.23 N ATOM 315 CA THR 39 6.588 0.897 -7.172 1.00 0.23 C ATOM 316 C THR 39 5.247 0.307 -7.582 1.00 0.23 C ATOM 317 O THR 39 5.191 -0.600 -8.411 1.00 0.23 O ATOM 318 CB THR 39 6.987 2.008 -8.160 1.00 0.23 C ATOM 319 OG1 THR 39 8.220 2.605 -7.740 1.00 0.23 O ATOM 320 CG2 THR 39 5.917 3.088 -8.210 1.00 0.23 C ATOM 321 N LEU 40 4.165 0.825 -6.997 1.00 0.32 N ATOM 322 CA LEU 40 2.819 0.390 -7.312 1.00 0.32 C ATOM 323 C LEU 40 1.966 1.603 -7.657 1.00 0.32 C ATOM 324 O LEU 40 2.203 2.697 -7.151 1.00 0.32 O ATOM 325 CB LEU 40 2.218 -0.387 -6.139 1.00 0.32 C ATOM 326 CG LEU 40 2.945 -1.672 -5.735 1.00 0.32 C ATOM 327 CD1 LEU 40 2.358 -2.242 -4.453 1.00 0.32 C ATOM 328 CD2 LEU 40 2.878 -2.703 -6.852 1.00 0.32 C ATOM 329 N CYS 41 0.969 1.408 -8.523 1.00 0.00 N ATOM 330 CA CYS 41 0.018 2.429 -8.917 1.00 0.00 C ATOM 331 C CYS 41 -1.382 1.938 -8.577 1.00 0.00 C ATOM 332 O CYS 41 -1.641 0.737 -8.586 1.00 0.00 O ATOM 333 CB CYS 41 0.157 2.743 -10.408 1.00 0.00 C ATOM 334 SG CYS 41 1.783 3.369 -10.891 1.00 0.00 S TER END