####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 334), selected 41 , name T0955TS157_2 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS157_2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 3.19 3.19 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 2 - 23 1.85 3.37 LCS_AVERAGE: 45.57 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 2 - 18 0.99 3.60 LCS_AVERAGE: 27.60 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 21 41 0 3 3 3 9 21 27 32 35 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT Q 2 Q 2 17 22 41 7 13 21 24 26 28 31 33 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT E 3 E 3 17 22 41 7 13 21 24 26 28 31 33 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT T 4 T 4 17 22 41 7 13 21 24 26 28 31 33 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT R 5 R 5 17 22 41 7 13 21 24 26 28 31 33 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT K 6 K 6 17 22 41 7 13 21 24 26 28 31 33 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT K 7 K 7 17 22 41 7 13 21 24 26 28 31 33 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT C 8 C 8 17 22 41 7 13 21 24 26 28 31 33 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT T 9 T 9 17 22 41 7 13 21 24 26 28 31 33 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT E 10 E 10 17 22 41 5 13 21 24 26 28 31 33 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT M 11 M 11 17 22 41 5 13 21 24 26 28 31 33 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT K 12 K 12 17 22 41 5 13 21 24 26 28 31 33 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT K 13 K 13 17 22 41 7 13 21 24 26 28 31 33 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT K 14 K 14 17 22 41 7 13 21 24 26 28 31 33 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT F 15 F 15 17 22 41 3 12 21 24 26 28 31 33 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT K 16 K 16 17 22 41 3 8 20 24 26 28 31 33 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT N 17 N 17 17 22 41 3 10 21 24 26 28 31 33 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT C 18 C 18 17 22 41 4 10 21 24 26 28 31 33 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT E 19 E 19 9 22 41 4 8 21 24 26 28 31 33 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT V 20 V 20 8 22 41 4 7 11 18 26 28 31 33 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT R 21 R 21 8 22 41 4 7 12 17 26 28 31 33 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT C 22 C 22 8 22 41 4 6 10 14 21 27 31 33 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT D 23 D 23 8 22 41 4 6 10 14 21 27 31 33 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT E 24 E 24 8 20 41 3 4 10 12 17 22 29 32 34 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT S 25 S 25 9 20 41 5 10 21 24 26 28 31 33 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT N 26 N 26 9 19 41 4 8 11 20 25 28 30 33 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT H 27 H 27 9 19 41 4 7 10 14 18 22 29 32 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT C 28 C 28 9 19 41 6 8 10 14 18 26 30 32 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT V 29 V 29 9 19 41 6 8 12 21 25 28 31 33 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT E 30 E 30 9 19 41 6 12 21 24 26 28 31 33 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT V 31 V 31 9 19 41 6 12 21 24 26 28 31 33 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT R 32 R 32 9 19 41 6 8 21 24 26 28 31 33 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT C 33 C 33 9 19 41 6 8 13 24 26 28 31 33 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT S 34 S 34 7 19 41 3 8 16 24 26 28 31 33 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT D 35 D 35 5 10 41 7 13 19 22 25 28 31 33 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT T 36 T 36 5 10 41 3 10 16 20 24 27 30 32 35 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT K 37 K 37 5 6 41 4 5 5 6 17 27 31 33 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT Y 38 Y 38 5 6 41 4 5 5 6 7 27 31 33 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT T 39 T 39 5 6 41 4 5 5 6 7 16 28 33 36 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT L 40 L 40 5 6 41 4 5 5 6 7 9 16 32 34 38 39 41 41 41 41 41 41 41 41 41 LCS_GDT C 41 C 41 5 6 41 3 5 5 6 7 9 10 22 26 38 39 41 41 41 41 41 41 41 41 41 LCS_AVERAGE LCS_A: 57.72 ( 27.60 45.57 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 13 21 24 26 28 31 33 36 38 39 41 41 41 41 41 41 41 41 41 GDT PERCENT_AT 17.07 31.71 51.22 58.54 63.41 68.29 75.61 80.49 87.80 92.68 95.12 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.33 0.64 1.14 1.27 1.48 1.64 2.06 2.24 2.56 2.79 2.89 3.19 3.19 3.19 3.19 3.19 3.19 3.19 3.19 3.19 GDT RMS_ALL_AT 4.41 3.87 3.40 3.40 3.37 3.35 3.32 3.33 3.23 3.24 3.23 3.19 3.19 3.19 3.19 3.19 3.19 3.19 3.19 3.19 # Checking swapping # possible swapping detected: E 10 E 10 # possible swapping detected: E 19 E 19 # possible swapping detected: D 23 D 23 # possible swapping detected: E 24 E 24 # possible swapping detected: E 30 E 30 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 7.621 0 0.068 0.127 10.728 3.182 2.121 10.728 LGA Q 2 Q 2 2.625 0 0.650 1.342 5.122 26.364 34.343 2.251 LGA E 3 E 3 1.659 0 0.023 1.420 6.076 50.909 29.697 5.824 LGA T 4 T 4 1.942 0 0.079 1.058 4.458 50.909 44.675 4.458 LGA R 5 R 5 2.328 0 0.028 1.019 7.208 41.364 21.983 7.208 LGA K 6 K 6 1.734 0 0.050 1.233 5.554 54.545 35.354 5.355 LGA K 7 K 7 0.793 0 0.067 0.684 4.136 77.727 58.384 4.136 LGA C 8 C 8 1.077 0 0.101 0.695 4.363 69.545 58.182 4.363 LGA T 9 T 9 1.696 0 0.077 1.048 4.243 54.545 41.299 4.243 LGA E 10 E 10 1.045 0 0.055 0.620 1.488 78.182 71.111 1.450 LGA M 11 M 11 0.751 0 0.015 1.057 6.488 82.273 56.364 6.488 LGA K 12 K 12 1.656 0 0.025 0.661 3.058 58.182 42.424 3.058 LGA K 13 K 13 1.170 0 0.042 1.027 6.970 69.545 41.414 6.970 LGA K 14 K 14 0.660 0 0.037 0.636 4.123 86.364 66.667 4.123 LGA F 15 F 15 1.051 0 0.515 0.527 3.812 52.273 43.967 2.951 LGA K 16 K 16 1.191 0 0.081 0.976 2.800 73.636 55.556 2.800 LGA N 17 N 17 0.892 0 0.278 0.297 1.679 74.091 70.000 1.539 LGA C 18 C 18 0.610 0 0.039 0.049 1.085 77.727 79.091 0.688 LGA E 19 E 19 1.062 0 0.278 0.569 1.994 82.273 68.081 1.846 LGA V 20 V 20 2.470 0 0.016 0.037 3.490 30.455 25.195 3.490 LGA R 21 R 21 2.642 0 0.124 1.514 8.626 35.909 20.165 5.564 LGA C 22 C 22 3.614 0 0.124 0.883 5.409 10.909 9.091 5.409 LGA D 23 D 23 3.836 0 0.127 0.675 4.741 6.364 14.773 2.618 LGA E 24 E 24 6.007 0 0.323 0.580 11.091 0.455 0.202 9.955 LGA S 25 S 25 1.259 0 0.053 0.764 4.226 37.273 38.788 3.434 LGA N 26 N 26 4.269 0 0.057 1.178 6.744 8.182 8.182 3.918 LGA H 27 H 27 6.188 0 0.244 0.273 8.226 0.455 0.182 6.610 LGA C 28 C 28 5.554 0 0.123 0.809 5.995 4.091 2.727 5.462 LGA V 29 V 29 3.492 0 0.104 0.136 4.882 17.273 14.286 3.161 LGA E 30 E 30 1.822 0 0.188 1.019 7.813 63.182 32.525 7.174 LGA V 31 V 31 0.971 0 0.052 0.120 2.347 62.273 62.078 0.878 LGA R 32 R 32 1.667 0 0.266 1.286 8.430 52.273 25.289 6.957 LGA C 33 C 33 2.532 0 0.482 0.551 5.200 20.909 26.970 1.770 LGA S 34 S 34 2.131 0 0.532 0.515 4.805 55.455 39.091 4.805 LGA D 35 D 35 3.636 0 0.492 1.128 8.594 19.545 10.000 8.594 LGA T 36 T 36 5.224 0 0.451 0.956 9.785 3.182 1.818 9.127 LGA K 37 K 37 3.441 0 0.616 1.566 12.466 25.455 11.515 12.466 LGA Y 38 Y 38 3.676 0 0.024 1.357 9.923 12.727 4.848 9.923 LGA T 39 T 39 4.019 0 0.140 0.149 5.954 4.545 5.714 3.582 LGA L 40 L 40 5.424 0 0.197 0.923 6.750 1.364 0.909 4.630 LGA C 41 C 41 7.172 1 0.471 0.574 9.036 0.000 0.000 6.921 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 334 99.70 41 41 SUMMARY(RMSD_GDC): 3.193 3.203 4.216 39.900 31.099 15.299 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 33 2.24 67.683 66.580 1.413 LGA_LOCAL RMSD: 2.235 Number of atoms: 33 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 3.330 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 3.193 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.239869 * X + 0.952868 * Y + -0.185758 * Z + -1.132326 Y_new = 0.838178 * X + -0.299814 * Y + -0.455598 * Z + -0.110181 Z_new = -0.489817 * X + -0.046414 * Y + -0.870589 * Z + 1.087672 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.292067 0.511880 -3.088329 [DEG: 74.0300 29.3286 -176.9482 ] ZXZ: -0.387146 2.627194 -1.665273 [DEG: -22.1819 150.5271 -95.4131 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS157_2 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS157_2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 33 2.24 66.580 3.19 REMARK ---------------------------------------------------------- MOLECULE T0955TS157_2 PFRMAT TS TARGET T0955 MODEL 2 PARENT N/A ATOM 1 N SER 1 1.099 -16.110 7.601 1.00 0.00 N ATOM 2 CA SER 1 1.447 -14.896 6.891 1.00 0.00 C ATOM 3 C SER 1 1.101 -14.953 5.409 1.00 0.00 C ATOM 4 O SER 1 1.108 -16.024 4.808 1.00 0.00 O ATOM 5 CB SER 1 2.939 -14.593 7.045 1.00 0.00 C ATOM 6 OG SER 1 3.271 -14.341 8.399 1.00 0.00 O ATOM 7 N GLN 2 0.802 -13.787 4.832 1.00 0.85 N ATOM 8 CA GLN 2 0.424 -13.673 3.438 1.00 0.85 C ATOM 9 C GLN 2 1.400 -12.775 2.693 1.00 0.85 C ATOM 10 O GLN 2 1.978 -11.861 3.278 1.00 0.85 O ATOM 11 CB GLN 2 -1.002 -13.131 3.312 1.00 0.85 C ATOM 12 CD GLN 2 -3.467 -13.490 3.728 1.00 0.85 C ATOM 13 CG GLN 2 -2.065 -14.041 3.905 1.00 0.85 C ATOM 14 OE1 GLN 2 -3.710 -12.302 3.941 1.00 0.85 O ATOM 15 NE2 GLN 2 -4.396 -14.355 3.336 1.00 0.85 N ATOM 16 N GLU 3 1.597 -13.021 1.396 1.00 0.12 N ATOM 17 CA GLU 3 2.497 -12.186 0.626 1.00 0.12 C ATOM 18 C GLU 3 1.947 -10.782 0.420 1.00 0.12 C ATOM 19 O GLU 3 2.710 -9.824 0.304 1.00 0.12 O ATOM 20 CB GLU 3 2.787 -12.823 -0.735 1.00 0.12 C ATOM 21 CD GLU 3 4.989 -13.873 -0.080 1.00 0.12 C ATOM 22 CG GLU 3 3.606 -14.102 -0.659 1.00 0.12 C ATOM 23 OE1 GLU 3 5.676 -12.935 -0.534 1.00 0.12 O ATOM 24 OE2 GLU 3 5.384 -14.634 0.829 1.00 0.12 O ATOM 25 N THR 4 0.621 -10.645 0.374 1.00 0.09 N ATOM 26 CA THR 4 0.037 -9.330 0.197 1.00 0.09 C ATOM 27 C THR 4 0.177 -8.494 1.461 1.00 0.09 C ATOM 28 O THR 4 0.270 -7.270 1.392 1.00 0.09 O ATOM 29 CB THR 4 -1.449 -9.421 -0.194 1.00 0.09 C ATOM 30 OG1 THR 4 -2.176 -10.109 0.831 1.00 0.09 O ATOM 31 CG2 THR 4 -1.611 -10.184 -1.501 1.00 0.09 C ATOM 32 N ARG 5 0.192 -9.169 2.612 1.00 0.04 N ATOM 33 CA ARG 5 0.357 -8.495 3.884 1.00 0.04 C ATOM 34 C ARG 5 1.735 -7.855 3.967 1.00 0.04 C ATOM 35 O ARG 5 1.900 -6.807 4.586 1.00 0.04 O ATOM 36 CB ARG 5 0.149 -9.474 5.040 1.00 0.04 C ATOM 37 CD ARG 5 -1.413 -10.943 6.345 1.00 0.04 C ATOM 38 NE ARG 5 -2.795 -11.380 6.537 1.00 0.04 N ATOM 39 CG ARG 5 -1.289 -9.935 5.213 1.00 0.04 C ATOM 40 CZ ARG 5 -3.162 -12.342 7.377 1.00 0.04 C ATOM 41 NH1 ARG 5 -4.442 -12.673 7.486 1.00 0.04 N ATOM 42 NH2 ARG 5 -2.251 -12.970 8.107 1.00 0.04 N ATOM 43 N LYS 6 2.725 -8.495 3.340 1.00 0.03 N ATOM 44 CA LYS 6 4.086 -7.996 3.341 1.00 0.03 C ATOM 45 C LYS 6 4.234 -6.719 2.526 1.00 0.03 C ATOM 46 O LYS 6 4.966 -5.813 2.915 1.00 0.03 O ATOM 47 CB LYS 6 5.047 -9.059 2.802 1.00 0.03 C ATOM 48 CD LYS 6 6.194 -11.267 3.125 1.00 0.03 C ATOM 49 CE LYS 6 6.388 -12.456 4.053 1.00 0.03 C ATOM 50 CG LYS 6 5.240 -10.248 3.727 1.00 0.03 C ATOM 51 NZ LYS 6 7.288 -13.482 3.457 1.00 0.03 N ATOM 52 N LYS 7 3.547 -6.621 1.385 1.00 0.03 N ATOM 53 CA LYS 7 3.592 -5.415 0.583 1.00 0.03 C ATOM 54 C LYS 7 2.915 -4.246 1.282 1.00 0.03 C ATOM 55 O LYS 7 3.461 -3.146 1.330 1.00 0.03 O ATOM 56 CB LYS 7 2.937 -5.654 -0.779 1.00 0.03 C ATOM 57 CD LYS 7 2.379 -4.778 -3.064 1.00 0.03 C ATOM 58 CE LYS 7 2.405 -3.569 -3.985 1.00 0.03 C ATOM 59 CG LYS 7 2.973 -4.447 -1.704 1.00 0.03 C ATOM 60 NZ LYS 7 1.825 -3.877 -5.322 1.00 0.03 N ATOM 61 N CYS 8 1.719 -4.469 1.831 1.00 0.02 N ATOM 62 CA CYS 8 1.023 -3.443 2.582 1.00 0.02 C ATOM 63 C CYS 8 1.818 -2.974 3.794 1.00 0.02 C ATOM 64 O CYS 8 1.710 -1.819 4.201 1.00 0.02 O ATOM 65 CB CYS 8 -0.347 -3.947 3.036 1.00 0.02 C ATOM 66 SG CYS 8 -0.286 -5.345 4.181 1.00 0.02 S ATOM 67 N THR 9 2.624 -3.857 4.386 1.00 0.02 N ATOM 68 CA THR 9 3.382 -3.429 5.544 1.00 0.02 C ATOM 69 C THR 9 4.496 -2.480 5.125 1.00 0.02 C ATOM 70 O THR 9 4.895 -1.609 5.895 1.00 0.02 O ATOM 71 CB THR 9 3.977 -4.629 6.303 1.00 0.02 C ATOM 72 OG1 THR 9 4.847 -5.365 5.435 1.00 0.02 O ATOM 73 CG2 THR 9 2.871 -5.556 6.785 1.00 0.02 C ATOM 74 N GLU 10 5.006 -2.638 3.902 1.00 0.02 N ATOM 75 CA GLU 10 6.062 -1.766 3.430 1.00 0.02 C ATOM 76 C GLU 10 5.577 -0.333 3.259 1.00 0.02 C ATOM 77 O GLU 10 6.333 0.612 3.475 1.00 0.02 O ATOM 78 CB GLU 10 6.629 -2.280 2.105 1.00 0.02 C ATOM 79 CD GLU 10 7.931 -4.073 0.891 1.00 0.02 C ATOM 80 CG GLU 10 7.404 -3.583 2.226 1.00 0.02 C ATOM 81 OE1 GLU 10 7.552 -3.490 -0.147 1.00 0.02 O ATOM 82 OE2 GLU 10 8.723 -5.039 0.884 1.00 0.02 O ATOM 83 N MET 11 4.310 -0.167 2.871 1.00 0.05 N ATOM 84 CA MET 11 3.733 1.152 2.701 1.00 0.05 C ATOM 85 C MET 11 3.523 1.856 4.033 1.00 0.05 C ATOM 86 O MET 11 3.534 3.083 4.099 1.00 0.05 O ATOM 87 CB MET 11 2.403 1.062 1.951 1.00 0.05 C ATOM 88 SD MET 11 0.944 0.485 -0.333 1.00 0.05 S ATOM 89 CE MET 11 0.465 2.205 -0.477 1.00 0.05 C ATOM 90 CG MET 11 2.538 0.643 0.495 1.00 0.05 C ATOM 91 N LYS 12 3.333 1.076 5.100 1.00 0.03 N ATOM 92 CA LYS 12 3.124 1.647 6.416 1.00 0.03 C ATOM 93 C LYS 12 4.443 2.199 6.937 1.00 0.03 C ATOM 94 O LYS 12 4.460 3.176 7.683 1.00 0.03 O ATOM 95 CB LYS 12 2.551 0.598 7.371 1.00 0.03 C ATOM 96 CD LYS 12 0.612 -0.845 8.049 1.00 0.03 C ATOM 97 CE LYS 12 -0.828 -1.232 7.753 1.00 0.03 C ATOM 98 CG LYS 12 1.118 0.194 7.061 1.00 0.03 C ATOM 99 NZ LYS 12 -1.321 -2.286 8.682 1.00 0.03 N ATOM 100 N LYS 13 5.560 1.580 6.548 1.00 0.02 N ATOM 101 CA LYS 13 6.862 2.114 6.894 1.00 0.02 C ATOM 102 C LYS 13 7.294 3.211 5.930 1.00 0.02 C ATOM 103 O LYS 13 7.886 4.206 6.342 1.00 0.02 O ATOM 104 CB LYS 13 7.910 1.000 6.913 1.00 0.02 C ATOM 105 CD LYS 13 10.259 0.288 7.438 1.00 0.02 C ATOM 106 CE LYS 13 11.646 0.749 7.852 1.00 0.02 C ATOM 107 CG LYS 13 9.298 1.460 7.327 1.00 0.02 C ATOM 108 NZ LYS 13 12.599 -0.390 7.966 1.00 0.02 N ATOM 109 N LYS 14 7.005 3.044 4.637 1.00 0.05 N ATOM 110 CA LYS 14 7.424 4.013 3.645 1.00 0.05 C ATOM 111 C LYS 14 6.617 5.304 3.654 1.00 0.05 C ATOM 112 O LYS 14 7.129 6.363 3.292 1.00 0.05 O ATOM 113 CB LYS 14 7.351 3.408 2.241 1.00 0.05 C ATOM 114 CD LYS 14 8.264 1.782 0.562 1.00 0.05 C ATOM 115 CE LYS 14 9.320 0.722 0.287 1.00 0.05 C ATOM 116 CG LYS 14 8.391 2.333 1.973 1.00 0.05 C ATOM 117 NZ LYS 14 9.176 0.136 -1.074 1.00 0.05 N ATOM 118 N PHE 15 5.347 5.260 4.063 1.00 0.83 N ATOM 119 CA PHE 15 4.521 6.450 4.087 1.00 0.83 C ATOM 120 C PHE 15 3.951 6.909 5.420 1.00 0.83 C ATOM 121 O PHE 15 4.391 6.460 6.475 1.00 0.83 O ATOM 122 CB PHE 15 3.324 6.291 3.148 1.00 0.83 C ATOM 123 CG PHE 15 3.703 6.125 1.705 1.00 0.83 C ATOM 124 CZ PHE 15 4.405 5.826 -0.969 1.00 0.83 C ATOM 125 CD1 PHE 15 3.857 4.864 1.154 1.00 0.83 C ATOM 126 CE1 PHE 15 4.207 4.712 -0.175 1.00 0.83 C ATOM 127 CD2 PHE 15 3.905 7.230 0.896 1.00 0.83 C ATOM 128 CE2 PHE 15 4.254 7.077 -0.432 1.00 0.83 C ATOM 129 N LYS 16 2.967 7.811 5.359 1.00 0.30 N ATOM 130 CA LYS 16 2.375 8.412 6.538 1.00 0.30 C ATOM 131 C LYS 16 1.401 9.477 6.053 1.00 0.30 C ATOM 132 O LYS 16 0.403 9.756 6.714 1.00 0.30 O ATOM 133 CB LYS 16 3.461 8.992 7.447 1.00 0.30 C ATOM 134 CD LYS 16 2.349 8.564 9.656 1.00 0.30 C ATOM 135 CE LYS 16 1.920 9.174 10.980 1.00 0.30 C ATOM 136 CG LYS 16 2.931 9.617 8.727 1.00 0.30 C ATOM 137 NZ LYS 16 1.287 8.166 11.877 1.00 0.30 N ATOM 138 N ASN 17 1.713 10.057 4.891 1.00 0.13 N ATOM 139 CA ASN 17 0.948 11.122 4.274 1.00 0.13 C ATOM 140 C ASN 17 0.332 10.805 2.919 1.00 0.13 C ATOM 141 O ASN 17 0.114 11.702 2.108 1.00 0.13 O ATOM 142 CB ASN 17 1.809 12.377 4.116 1.00 0.13 C ATOM 143 CG ASN 17 2.168 13.009 5.447 1.00 0.13 C ATOM 144 OD1 ASN 17 1.334 13.653 6.084 1.00 0.13 O ATOM 145 ND2 ASN 17 3.413 12.827 5.870 1.00 0.13 N ATOM 146 N CYS 18 0.048 9.525 2.666 1.00 0.07 N ATOM 147 CA CYS 18 -0.437 9.010 1.402 1.00 0.07 C ATOM 148 C CYS 18 -1.729 8.240 1.632 1.00 0.07 C ATOM 149 O CYS 18 -1.908 7.618 2.677 1.00 0.07 O ATOM 150 CB CYS 18 0.621 8.121 0.744 1.00 0.07 C ATOM 151 SG CYS 18 2.172 8.967 0.359 1.00 0.07 S ATOM 152 N GLU 19 -2.633 8.282 0.651 1.00 0.18 N ATOM 153 CA GLU 19 -3.885 7.558 0.736 1.00 0.18 C ATOM 154 C GLU 19 -3.609 6.071 0.572 1.00 0.18 C ATOM 155 O GLU 19 -2.729 5.679 -0.191 1.00 0.18 O ATOM 156 CB GLU 19 -4.868 8.059 -0.325 1.00 0.18 C ATOM 157 CD GLU 19 -7.211 7.995 -1.264 1.00 0.18 C ATOM 158 CG GLU 19 -6.250 7.432 -0.236 1.00 0.18 C ATOM 159 OE1 GLU 19 -6.783 8.841 -2.078 1.00 0.18 O ATOM 160 OE2 GLU 19 -8.393 7.590 -1.257 1.00 0.18 O ATOM 161 N VAL 20 -4.368 5.245 1.297 1.00 0.15 N ATOM 162 CA VAL 20 -4.186 3.808 1.227 1.00 0.15 C ATOM 163 C VAL 20 -5.508 3.153 0.857 1.00 0.15 C ATOM 164 O VAL 20 -6.451 3.163 1.646 1.00 0.15 O ATOM 165 CB VAL 20 -3.647 3.242 2.553 1.00 0.15 C ATOM 166 CG1 VAL 20 -3.474 1.734 2.458 1.00 0.15 C ATOM 167 CG2 VAL 20 -2.331 3.910 2.922 1.00 0.15 C ATOM 168 N ARG 21 -5.589 2.575 -0.343 1.00 0.21 N ATOM 169 CA ARG 21 -6.794 1.912 -0.795 1.00 0.21 C ATOM 170 C ARG 21 -6.514 0.419 -0.907 1.00 0.21 C ATOM 171 O ARG 21 -5.365 0.011 -1.064 1.00 0.21 O ATOM 172 CB ARG 21 -7.258 2.495 -2.132 1.00 0.21 C ATOM 173 CD ARG 21 -8.147 4.462 -3.413 1.00 0.21 C ATOM 174 NE ARG 21 -8.521 5.874 -3.369 1.00 0.21 N ATOM 175 CG ARG 21 -7.654 3.961 -2.065 1.00 0.21 C ATOM 176 CZ ARG 21 -9.062 6.535 -4.387 1.00 0.21 C ATOM 177 NH1 ARG 21 -9.370 7.817 -4.255 1.00 0.21 N ATOM 178 NH2 ARG 21 -9.293 5.912 -5.534 1.00 0.21 N ATOM 179 N CYS 22 -7.555 -0.412 -0.829 1.00 0.36 N ATOM 180 CA CYS 22 -7.355 -1.847 -0.872 1.00 0.36 C ATOM 181 C CYS 22 -8.187 -2.410 -2.016 1.00 0.36 C ATOM 182 O CYS 22 -9.410 -2.286 -2.017 1.00 0.36 O ATOM 183 CB CYS 22 -7.736 -2.482 0.468 1.00 0.36 C ATOM 184 SG CYS 22 -7.485 -4.270 0.546 1.00 0.36 S ATOM 185 N ASP 23 -7.496 -3.027 -2.977 1.00 0.21 N ATOM 186 CA ASP 23 -8.156 -3.571 -4.148 1.00 0.21 C ATOM 187 C ASP 23 -9.020 -4.728 -3.669 1.00 0.21 C ATOM 188 O ASP 23 -8.657 -5.431 -2.727 1.00 0.21 O ATOM 189 CB ASP 23 -7.125 -4.007 -5.190 1.00 0.21 C ATOM 190 CG ASP 23 -6.424 -2.834 -5.844 1.00 0.21 C ATOM 191 OD1 ASP 23 -6.896 -1.690 -5.675 1.00 0.21 O ATOM 192 OD2 ASP 23 -5.401 -3.056 -6.525 1.00 0.21 O ATOM 193 N GLU 24 -10.171 -4.936 -4.312 1.00 0.05 N ATOM 194 CA GLU 24 -11.128 -5.969 -3.971 1.00 0.05 C ATOM 195 C GLU 24 -10.785 -7.442 -4.145 1.00 0.05 C ATOM 196 O GLU 24 -11.649 -8.248 -4.482 1.00 0.05 O ATOM 197 CB GLU 24 -12.425 -5.780 -4.759 1.00 0.05 C ATOM 198 CD GLU 24 -14.468 -4.362 -5.202 1.00 0.05 C ATOM 199 CG GLU 24 -13.206 -4.532 -4.379 1.00 0.05 C ATOM 200 OE1 GLU 24 -14.658 -5.135 -6.165 1.00 0.05 O ATOM 201 OE2 GLU 24 -15.267 -3.455 -4.885 1.00 0.05 O ATOM 202 N SER 25 -9.518 -7.794 -3.916 1.00 0.06 N ATOM 203 CA SER 25 -9.091 -9.171 -4.065 1.00 0.06 C ATOM 204 C SER 25 -7.675 -9.424 -3.568 1.00 0.06 C ATOM 205 O SER 25 -7.388 -10.483 -3.013 1.00 0.06 O ATOM 206 CB SER 25 -9.185 -9.606 -5.530 1.00 0.06 C ATOM 207 OG SER 25 -8.785 -10.956 -5.687 1.00 0.06 O ATOM 208 N ASN 26 -6.792 -8.444 -3.771 1.00 0.07 N ATOM 209 CA ASN 26 -5.410 -8.584 -3.358 1.00 0.07 C ATOM 210 C ASN 26 -5.215 -8.347 -1.867 1.00 0.07 C ATOM 211 O ASN 26 -4.317 -8.921 -1.257 1.00 0.07 O ATOM 212 CB ASN 26 -4.513 -7.633 -4.153 1.00 0.07 C ATOM 213 CG ASN 26 -4.337 -8.067 -5.595 1.00 0.07 C ATOM 214 OD1 ASN 26 -4.495 -9.244 -5.922 1.00 0.07 O ATOM 215 ND2 ASN 26 -4.010 -7.117 -6.463 1.00 0.07 N ATOM 216 N HIS 27 -6.077 -7.492 -1.312 1.00 0.12 N ATOM 217 CA HIS 27 -6.004 -7.189 0.103 1.00 0.12 C ATOM 218 C HIS 27 -4.801 -6.314 0.426 1.00 0.12 C ATOM 219 O HIS 27 -4.740 -5.707 1.493 1.00 0.12 O ATOM 220 CB HIS 27 -5.944 -8.479 0.925 1.00 0.12 C ATOM 221 CG HIS 27 -7.099 -9.401 0.687 1.00 0.12 C ATOM 222 ND1 HIS 27 -8.386 -9.097 1.074 1.00 0.12 N ATOM 223 CE1 HIS 27 -9.199 -10.111 0.727 1.00 0.12 C ATOM 224 CD2 HIS 27 -7.272 -10.712 0.078 1.00 0.12 C ATOM 225 NE2 HIS 27 -8.537 -11.084 0.128 1.00 0.12 N ATOM 226 N CYS 28 -3.844 -6.254 -0.503 1.00 0.81 N ATOM 227 CA CYS 28 -2.652 -5.442 -0.365 1.00 0.81 C ATOM 228 C CYS 28 -2.964 -3.954 -0.411 1.00 0.81 C ATOM 229 O CYS 28 -3.983 -3.547 -0.962 1.00 0.81 O ATOM 230 CB CYS 28 -1.639 -5.786 -1.459 1.00 0.81 C ATOM 231 SG CYS 28 -2.124 -5.258 -3.118 1.00 0.81 S ATOM 232 N VAL 29 -2.065 -3.163 0.179 1.00 0.06 N ATOM 233 CA VAL 29 -2.274 -1.729 0.199 1.00 0.06 C ATOM 234 C VAL 29 -1.693 -1.083 -1.051 1.00 0.06 C ATOM 235 O VAL 29 -0.604 -1.444 -1.492 1.00 0.06 O ATOM 236 CB VAL 29 -1.661 -1.086 1.457 1.00 0.06 C ATOM 237 CG1 VAL 29 -1.805 0.427 1.407 1.00 0.06 C ATOM 238 CG2 VAL 29 -2.311 -1.647 2.712 1.00 0.06 C ATOM 239 N GLU 30 -2.415 -0.121 -1.630 1.00 0.02 N ATOM 240 CA GLU 30 -1.931 0.604 -2.788 1.00 0.02 C ATOM 241 C GLU 30 -1.951 2.091 -2.467 1.00 0.02 C ATOM 242 O GLU 30 -3.003 2.724 -2.513 1.00 0.02 O ATOM 243 CB GLU 30 -2.784 0.283 -4.016 1.00 0.02 C ATOM 244 CD GLU 30 -1.346 -1.482 -5.111 1.00 0.02 C ATOM 245 CG GLU 30 -2.687 -1.161 -4.480 1.00 0.02 C ATOM 246 OE1 GLU 30 -0.593 -0.534 -5.418 1.00 0.02 O ATOM 247 OE2 GLU 30 -1.050 -2.681 -5.298 1.00 0.02 O ATOM 248 N VAL 31 -0.771 2.626 -2.146 1.00 0.04 N ATOM 249 CA VAL 31 -0.640 4.018 -1.766 1.00 0.04 C ATOM 250 C VAL 31 -0.654 4.909 -3.000 1.00 0.04 C ATOM 251 O VAL 31 -0.166 4.517 -4.058 1.00 0.04 O ATOM 252 CB VAL 31 0.644 4.262 -0.950 1.00 0.04 C ATOM 253 CG1 VAL 31 0.818 5.745 -0.663 1.00 0.04 C ATOM 254 CG2 VAL 31 0.610 3.465 0.345 1.00 0.04 C ATOM 255 N ARG 32 -1.214 6.113 -2.862 1.00 0.09 N ATOM 256 CA ARG 32 -1.299 7.073 -3.944 1.00 0.09 C ATOM 257 C ARG 32 -0.674 8.351 -3.404 1.00 0.09 C ATOM 258 O ARG 32 -0.841 8.680 -2.232 1.00 0.09 O ATOM 259 CB ARG 32 -2.753 7.258 -4.384 1.00 0.09 C ATOM 260 CD ARG 32 -2.786 5.677 -6.335 1.00 0.09 C ATOM 261 NE ARG 32 -3.420 4.511 -6.944 1.00 0.09 N ATOM 262 CG ARG 32 -3.385 6.008 -4.977 1.00 0.09 C ATOM 263 CZ ARG 32 -3.038 3.256 -6.732 1.00 0.09 C ATOM 264 NH1 ARG 32 -3.676 2.259 -7.331 1.00 0.09 N ATOM 265 NH2 ARG 32 -2.019 3.002 -5.924 1.00 0.09 N ATOM 266 N CYS 33 0.047 9.074 -4.263 1.00 0.23 N ATOM 267 CA CYS 33 0.689 10.294 -3.815 1.00 0.23 C ATOM 268 C CYS 33 0.170 11.522 -4.548 1.00 0.23 C ATOM 269 O CYS 33 -0.328 11.417 -5.667 1.00 0.23 O ATOM 270 CB CYS 33 2.206 10.198 -3.994 1.00 0.23 C ATOM 271 SG CYS 33 2.984 8.854 -3.067 1.00 0.23 S ATOM 272 N SER 34 0.310 12.670 -3.880 1.00 0.26 N ATOM 273 CA SER 34 -0.157 13.955 -4.359 1.00 0.26 C ATOM 274 C SER 34 -1.405 13.817 -5.219 1.00 0.26 C ATOM 275 O SER 34 -1.436 14.289 -6.354 1.00 0.26 O ATOM 276 CB SER 34 0.942 14.661 -5.156 1.00 0.26 C ATOM 277 OG SER 34 2.078 14.912 -4.345 1.00 0.26 O ATOM 278 N ASP 35 -2.433 13.166 -4.669 1.00 0.11 N ATOM 279 CA ASP 35 -3.701 13.006 -5.353 1.00 0.11 C ATOM 280 C ASP 35 -3.665 12.083 -6.563 1.00 0.11 C ATOM 281 O ASP 35 -3.691 12.546 -7.701 1.00 0.11 O ATOM 282 CB ASP 35 -4.240 14.363 -5.810 1.00 0.11 C ATOM 283 CG ASP 35 -5.707 14.310 -6.187 1.00 0.11 C ATOM 284 OD1 ASP 35 -6.416 13.410 -5.690 1.00 0.11 O ATOM 285 OD2 ASP 35 -6.147 15.169 -6.980 1.00 0.11 O ATOM 286 N THR 36 -3.605 10.769 -6.335 1.00 0.16 N ATOM 287 CA THR 36 -3.604 9.774 -7.388 1.00 0.16 C ATOM 288 C THR 36 -2.555 9.982 -8.471 1.00 0.16 C ATOM 289 O THR 36 -2.774 9.626 -9.627 1.00 0.16 O ATOM 290 CB THR 36 -4.972 9.693 -8.090 1.00 0.16 C ATOM 291 OG1 THR 36 -5.214 10.906 -8.812 1.00 0.16 O ATOM 292 CG2 THR 36 -6.084 9.505 -7.069 1.00 0.16 C ATOM 293 N LYS 37 -1.412 10.560 -8.095 1.00 0.42 N ATOM 294 CA LYS 37 -0.316 10.759 -9.021 1.00 0.42 C ATOM 295 C LYS 37 0.679 9.608 -9.070 1.00 0.42 C ATOM 296 O LYS 37 1.082 9.177 -10.149 1.00 0.42 O ATOM 297 CB LYS 37 0.446 12.042 -8.681 1.00 0.42 C ATOM 298 CD LYS 37 0.481 14.550 -8.596 1.00 0.42 C ATOM 299 CE LYS 37 -0.297 15.826 -8.870 1.00 0.42 C ATOM 300 CG LYS 37 -0.334 13.318 -8.953 1.00 0.42 C ATOM 301 NZ LYS 37 0.473 17.040 -8.485 1.00 0.42 N ATOM 302 N TYR 38 1.069 9.119 -7.891 1.00 0.44 N ATOM 303 CA TYR 38 2.174 8.193 -7.747 1.00 0.44 C ATOM 304 C TYR 38 1.689 6.887 -7.134 1.00 0.44 C ATOM 305 O TYR 38 0.665 6.859 -6.455 1.00 0.44 O ATOM 306 CB TYR 38 3.282 8.810 -6.890 1.00 0.44 C ATOM 307 CG TYR 38 3.919 10.036 -7.503 1.00 0.44 C ATOM 308 OH TYR 38 5.660 13.419 -9.181 1.00 0.44 O ATOM 309 CZ TYR 38 5.084 12.299 -8.626 1.00 0.44 C ATOM 310 CD1 TYR 38 3.378 11.298 -7.292 1.00 0.44 C ATOM 311 CE1 TYR 38 3.954 12.425 -7.849 1.00 0.44 C ATOM 312 CD2 TYR 38 5.059 9.929 -8.288 1.00 0.44 C ATOM 313 CE2 TYR 38 5.648 11.043 -8.853 1.00 0.44 C ATOM 314 N THR 39 2.427 5.800 -7.373 1.00 0.23 N ATOM 315 CA THR 39 2.064 4.505 -6.836 1.00 0.23 C ATOM 316 C THR 39 3.144 4.018 -5.880 1.00 0.23 C ATOM 317 O THR 39 4.332 4.184 -6.145 1.00 0.23 O ATOM 318 CB THR 39 1.847 3.470 -7.956 1.00 0.23 C ATOM 319 OG1 THR 39 0.787 3.908 -8.816 1.00 0.23 O ATOM 320 CG2 THR 39 1.467 2.120 -7.367 1.00 0.23 C ATOM 321 N LEU 40 2.729 3.416 -4.763 1.00 0.32 N ATOM 322 CA LEU 40 3.641 2.979 -3.726 1.00 0.32 C ATOM 323 C LEU 40 3.245 1.560 -3.343 1.00 0.32 C ATOM 324 O LEU 40 2.081 1.183 -3.466 1.00 0.32 O ATOM 325 CB LEU 40 3.592 3.933 -2.531 1.00 0.32 C ATOM 326 CG LEU 40 4.477 3.572 -1.338 1.00 0.32 C ATOM 327 CD1 LEU 40 5.949 3.667 -1.712 1.00 0.32 C ATOM 328 CD2 LEU 40 4.174 4.472 -0.150 1.00 0.32 C ATOM 329 N CYS 41 4.242 0.801 -2.883 1.00 0.00 N ATOM 330 CA CYS 41 4.025 -0.585 -2.521 1.00 0.00 C ATOM 331 C CYS 41 4.352 -0.818 -1.053 1.00 0.00 C ATOM 332 O CYS 41 5.183 -0.117 -0.480 1.00 0.00 O ATOM 333 CB CYS 41 4.868 -1.507 -3.404 1.00 0.00 C ATOM 334 SG CYS 41 4.498 -1.394 -5.170 1.00 0.00 S TER END