####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS152_5 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS152_5.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 4 - 23 4.87 11.94 LCS_AVERAGE: 46.70 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 4 - 14 1.80 17.23 LONGEST_CONTINUOUS_SEGMENT: 11 5 - 15 1.73 17.92 LONGEST_CONTINUOUS_SEGMENT: 11 6 - 16 1.90 18.61 LCS_AVERAGE: 20.82 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 6 - 14 0.82 18.27 LCS_AVERAGE: 14.57 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 7 10 17 3 6 7 9 9 11 11 12 12 14 14 17 17 18 18 18 20 20 22 25 LCS_GDT Q 2 Q 2 7 10 17 3 6 7 9 9 11 11 12 13 14 16 17 18 21 25 26 26 27 28 28 LCS_GDT E 3 E 3 7 10 19 5 6 7 9 9 11 11 13 13 14 16 17 17 18 24 26 26 29 29 30 LCS_GDT T 4 T 4 7 11 20 5 6 7 9 10 12 12 13 13 15 18 21 21 22 25 26 26 29 29 30 LCS_GDT R 5 R 5 7 11 20 5 6 7 9 10 12 12 13 13 16 18 21 21 23 25 26 26 29 29 31 LCS_GDT K 6 K 6 9 11 20 5 7 9 10 10 12 12 13 13 16 18 21 21 23 25 26 26 29 29 31 LCS_GDT K 7 K 7 9 11 20 5 8 9 10 10 12 12 13 13 16 18 21 21 23 25 26 26 29 29 31 LCS_GDT C 8 C 8 9 11 20 4 8 9 10 10 12 12 13 13 16 18 21 21 23 25 26 26 29 29 31 LCS_GDT T 9 T 9 9 11 20 5 8 9 10 10 12 12 13 13 16 18 21 21 23 25 26 26 29 29 31 LCS_GDT E 10 E 10 9 11 20 5 8 9 10 10 12 12 13 13 16 18 21 21 23 25 26 26 29 29 31 LCS_GDT M 11 M 11 9 11 20 5 8 9 10 10 12 12 13 13 16 18 21 21 23 25 26 26 28 29 31 LCS_GDT K 12 K 12 9 11 20 5 8 9 10 10 12 12 13 13 16 18 21 21 23 25 26 26 27 29 31 LCS_GDT K 13 K 13 9 11 20 5 8 9 10 10 12 12 13 13 16 18 21 21 23 25 26 26 27 29 31 LCS_GDT K 14 K 14 9 11 20 4 8 9 10 10 12 12 13 13 16 18 21 21 23 25 26 26 27 29 31 LCS_GDT F 15 F 15 7 11 20 3 4 7 10 10 12 12 13 13 16 18 21 21 23 25 26 26 27 28 28 LCS_GDT K 16 K 16 4 11 20 1 4 4 5 8 8 11 12 13 16 18 21 21 23 25 26 26 27 28 28 LCS_GDT N 17 N 17 3 6 20 3 3 3 4 5 6 6 9 13 16 18 21 21 23 25 26 26 27 28 28 LCS_GDT C 18 C 18 3 6 20 3 3 4 5 6 6 6 9 13 16 18 21 21 23 25 26 26 27 28 28 LCS_GDT E 19 E 19 4 6 20 3 4 4 5 6 6 7 9 13 16 18 21 21 23 25 26 26 27 28 28 LCS_GDT V 20 V 20 4 6 20 3 4 4 5 6 6 7 9 10 13 18 21 21 23 25 26 26 27 29 31 LCS_GDT R 21 R 21 4 6 20 3 4 4 5 6 6 8 9 13 16 18 21 21 23 25 26 26 29 29 31 LCS_GDT C 22 C 22 4 6 20 3 4 4 5 6 7 9 10 11 13 15 19 21 23 25 26 26 29 29 31 LCS_GDT D 23 D 23 4 7 20 3 3 4 5 6 8 9 10 12 13 15 19 21 23 25 26 26 29 29 31 LCS_GDT E 24 E 24 3 8 19 3 3 5 5 7 8 9 10 11 13 15 17 20 23 25 26 26 29 29 31 LCS_GDT S 25 S 25 3 8 19 3 3 5 5 7 8 9 10 11 13 15 17 20 21 23 25 26 29 29 31 LCS_GDT N 26 N 26 6 8 19 3 4 6 7 7 9 10 11 11 13 15 17 20 21 23 25 26 29 29 31 LCS_GDT H 27 H 27 6 8 19 3 5 6 7 7 9 10 11 11 13 15 17 20 23 25 26 26 29 29 31 LCS_GDT C 28 C 28 6 8 19 3 5 6 7 7 9 10 11 13 16 18 21 21 23 25 26 26 29 29 31 LCS_GDT V 29 V 29 6 8 19 3 5 6 7 7 9 10 11 13 16 18 21 21 23 25 26 26 29 29 31 LCS_GDT E 30 E 30 6 8 19 3 5 6 7 7 9 10 11 11 13 17 21 21 21 23 25 26 29 29 31 LCS_GDT V 31 V 31 6 8 19 3 5 6 7 7 9 10 11 11 13 15 17 20 21 23 25 26 29 29 31 LCS_GDT R 32 R 32 5 8 19 3 5 5 7 7 9 10 11 11 13 15 17 20 21 23 25 26 29 29 31 LCS_GDT C 33 C 33 5 8 19 3 5 5 6 7 9 10 11 11 13 15 16 20 21 23 25 26 29 29 31 LCS_GDT S 34 S 34 5 8 19 3 5 5 6 7 8 9 11 11 12 13 14 18 19 23 25 26 29 29 31 LCS_GDT D 35 D 35 5 8 19 3 5 5 6 7 8 8 9 10 12 13 14 16 19 22 25 26 29 29 31 LCS_GDT T 36 T 36 5 8 19 3 5 5 6 7 9 10 11 11 12 15 17 20 21 23 25 26 29 29 31 LCS_GDT K 37 K 37 5 6 19 4 5 5 6 6 7 9 11 11 12 15 17 20 21 23 25 26 29 29 31 LCS_GDT Y 38 Y 38 5 6 19 4 5 5 6 6 7 10 11 11 12 15 17 20 21 23 25 26 29 29 31 LCS_GDT T 39 T 39 5 6 19 4 5 5 6 6 7 9 9 11 14 16 17 20 21 23 25 26 29 29 31 LCS_GDT L 40 L 40 5 6 17 4 5 5 6 8 8 9 9 11 14 16 17 20 21 23 25 26 29 29 31 LCS_GDT C 41 C 41 5 6 11 2 5 5 6 6 7 9 9 10 12 14 17 20 21 23 25 26 29 29 31 LCS_AVERAGE LCS_A: 27.36 ( 14.57 20.82 46.70 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 5 8 9 10 10 12 12 13 13 16 18 21 21 23 25 26 26 29 29 31 GDT PERCENT_AT 12.20 19.51 21.95 24.39 24.39 29.27 29.27 31.71 31.71 39.02 43.90 51.22 51.22 56.10 60.98 63.41 63.41 70.73 70.73 75.61 GDT RMS_LOCAL 0.28 0.61 0.82 1.21 1.21 2.06 2.06 2.44 2.44 4.04 4.25 4.59 4.59 5.18 5.46 5.62 5.62 6.48 6.48 7.26 GDT RMS_ALL_AT 19.02 18.46 18.27 18.36 18.36 17.11 17.11 16.86 16.86 11.90 11.89 11.60 11.60 12.35 12.46 12.53 12.53 11.30 11.30 10.35 # Checking swapping # possible swapping detected: F 15 F 15 # possible swapping detected: E 19 E 19 # possible swapping detected: D 23 D 23 # possible swapping detected: E 30 E 30 # possible swapping detected: D 35 D 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 9.061 0 0.238 0.543 12.617 0.000 0.000 12.617 LGA Q 2 Q 2 7.236 0 0.242 0.896 12.153 2.727 1.212 12.153 LGA E 3 E 3 4.721 0 0.094 1.287 11.911 14.545 6.465 11.590 LGA T 4 T 4 2.372 0 0.061 1.165 6.116 39.545 24.156 6.116 LGA R 5 R 5 2.159 0 0.066 1.051 6.689 48.182 21.157 6.689 LGA K 6 K 6 1.298 0 0.100 1.144 4.726 60.909 36.162 3.091 LGA K 7 K 7 2.574 0 0.030 0.613 3.407 33.182 26.869 2.713 LGA C 8 C 8 2.327 0 0.046 0.865 2.896 44.545 40.606 2.896 LGA T 9 T 9 1.002 0 0.052 0.267 1.453 69.545 74.805 0.598 LGA E 10 E 10 1.920 0 0.078 0.494 4.296 50.909 36.768 2.469 LGA M 11 M 11 1.866 0 0.109 0.765 5.495 70.909 40.227 5.495 LGA K 12 K 12 0.579 0 0.052 0.671 2.124 77.727 69.899 1.162 LGA K 13 K 13 1.896 0 0.087 1.376 6.608 47.273 33.131 6.608 LGA K 14 K 14 2.503 0 0.022 0.739 8.075 30.455 19.596 8.075 LGA F 15 F 15 3.556 0 0.423 0.603 7.984 12.273 5.785 6.893 LGA K 16 K 16 8.552 0 0.295 1.349 12.986 0.000 0.000 6.605 LGA N 17 N 17 14.253 0 0.629 1.222 16.009 0.000 0.000 16.009 LGA C 18 C 18 15.317 0 0.435 0.540 16.767 0.000 0.000 12.389 LGA E 19 E 19 20.371 0 0.226 0.834 27.092 0.000 0.000 26.221 LGA V 20 V 20 18.609 0 0.052 0.225 21.351 0.000 0.000 16.818 LGA R 21 R 21 21.279 0 0.074 1.003 29.847 0.000 0.000 29.847 LGA C 22 C 22 19.815 0 0.634 1.113 22.103 0.000 0.000 20.839 LGA D 23 D 23 21.497 0 0.096 0.167 27.735 0.000 0.000 27.735 LGA E 24 E 24 20.365 0 0.638 0.846 23.265 0.000 0.000 22.961 LGA S 25 S 25 24.392 0 0.185 0.620 26.296 0.000 0.000 23.566 LGA N 26 N 26 23.096 0 0.647 1.283 23.724 0.000 0.000 23.174 LGA H 27 H 27 18.608 0 0.449 0.987 20.415 0.000 0.000 19.835 LGA C 28 C 28 16.455 0 0.130 0.731 21.081 0.000 0.000 21.081 LGA V 29 V 29 14.085 0 0.158 0.294 15.273 0.000 0.000 12.878 LGA E 30 E 30 18.810 0 0.115 1.032 26.990 0.000 0.000 25.814 LGA V 31 V 31 21.611 0 0.077 0.181 23.609 0.000 0.000 22.677 LGA R 32 R 32 27.911 0 0.147 1.340 33.190 0.000 0.000 33.190 LGA C 33 C 33 31.766 0 0.113 0.785 35.136 0.000 0.000 27.903 LGA S 34 S 34 34.233 0 0.128 0.680 35.973 0.000 0.000 35.973 LGA D 35 D 35 30.825 0 0.589 0.460 32.471 0.000 0.000 30.577 LGA T 36 T 36 26.233 0 0.084 0.853 27.805 0.000 0.000 27.139 LGA K 37 K 37 20.660 0 0.646 1.577 22.918 0.000 0.000 19.341 LGA Y 38 Y 38 16.019 0 0.148 1.392 20.555 0.000 0.000 20.555 LGA T 39 T 39 10.917 0 0.207 0.341 12.576 0.000 0.000 12.136 LGA L 40 L 40 9.581 0 0.161 1.021 11.936 0.000 0.000 11.936 LGA C 41 C 41 13.867 0 0.486 1.271 18.536 0.000 0.000 18.536 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 9.840 9.750 10.635 14.701 10.655 6.297 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 13 2.44 34.756 30.868 0.512 LGA_LOCAL RMSD: 2.439 Number of atoms: 13 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 16.861 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 9.840 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.169950 * X + -0.791791 * Y + 0.586672 * Z + 6.929685 Y_new = -0.976810 * X + -0.056681 * Y + 0.206469 * Z + -7.006571 Z_new = -0.130227 * X + -0.608156 * Y + -0.783063 * Z + 2.943697 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.398536 0.130598 -2.481260 [DEG: -80.1302 7.4827 -142.1657 ] ZXZ: 1.909191 2.470371 -2.930644 [DEG: 109.3886 141.5418 -167.9135 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS152_5 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS152_5.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 13 2.44 30.868 9.84 REMARK ---------------------------------------------------------- MOLECULE T0955TS152_5 PFRMAT TS TARGET T0955 MODEL 5 PARENT N/A ATOM 1 CB SER 1 8.891 -10.271 0.611 1.00 1.68 C ATOM 2 OG SER 1 8.376 -9.097 0.005 1.00 1.68 O ATOM 4 C SER 1 6.699 -11.295 1.292 1.00 1.68 C ATOM 5 O SER 1 5.577 -11.619 0.886 1.00 1.68 O ATOM 8 N SER 1 7.584 -11.616 -1.029 1.00 1.68 N ATOM 10 CA SER 1 7.943 -11.474 0.410 1.00 1.68 C ATOM 11 N GLN 2 6.948 -10.766 2.495 1.00 1.28 N ATOM 13 CA GLN 2 5.993 -10.424 3.560 1.00 1.28 C ATOM 14 CB GLN 2 6.760 -9.854 4.752 1.00 1.28 C ATOM 15 CG GLN 2 7.972 -10.641 5.222 1.00 1.28 C ATOM 16 CD GLN 2 8.966 -9.760 5.950 1.00 1.28 C ATOM 17 OE1 GLN 2 9.020 -9.755 7.176 1.00 1.28 O ATOM 18 NE2 GLN 2 9.743 -8.989 5.196 1.00 1.28 N ATOM 21 C GLN 2 5.164 -9.267 3.010 1.00 1.28 C ATOM 22 O GLN 2 3.947 -9.185 3.222 1.00 1.28 O ATOM 23 N GLU 3 5.857 -8.472 2.185 1.00 1.25 N ATOM 25 CA GLU 3 5.393 -7.236 1.559 1.00 1.25 C ATOM 26 CB GLU 3 6.536 -6.556 0.800 1.00 1.25 C ATOM 27 CG GLU 3 7.652 -5.983 1.667 1.00 1.25 C ATOM 28 CD GLU 3 8.638 -5.143 0.872 1.00 1.25 C ATOM 29 OE1 GLU 3 8.543 -3.899 0.936 1.00 1.25 O ATOM 30 OE2 GLU 3 9.506 -5.721 0.183 1.00 1.25 O ATOM 31 C GLU 3 4.069 -7.206 0.769 1.00 1.25 C ATOM 32 O GLU 3 3.468 -6.140 0.679 1.00 1.25 O ATOM 33 N THR 4 3.635 -8.314 0.153 1.00 1.60 N ATOM 35 CA THR 4 2.351 -8.327 -0.596 1.00 1.60 C ATOM 36 CB THR 4 2.248 -9.557 -1.529 1.00 1.60 C ATOM 37 OG1 THR 4 2.487 -10.756 -0.780 1.00 1.60 O ATOM 39 CG2 THR 4 3.260 -9.448 -2.647 1.00 1.60 C ATOM 40 C THR 4 1.053 -8.199 0.255 1.00 1.60 C ATOM 41 O THR 4 0.253 -7.288 0.006 1.00 1.60 O ATOM 42 N ARG 5 0.895 -9.043 1.291 1.00 1.68 N ATOM 44 CA ARG 5 -0.269 -9.003 2.217 1.00 1.68 C ATOM 45 CB ARG 5 -0.297 -10.228 3.138 1.00 1.68 C ATOM 46 CG ARG 5 -0.745 -11.517 2.464 1.00 1.68 C ATOM 47 CD ARG 5 -0.927 -12.631 3.483 1.00 1.68 C ATOM 48 NE ARG 5 -1.404 -13.870 2.868 1.00 1.68 N ATOM 50 CZ ARG 5 -1.674 -14.999 3.525 1.00 1.68 C ATOM 51 NH1 ARG 5 -2.102 -16.060 2.854 1.00 1.68 N ATOM 54 NH2 ARG 5 -1.523 -15.081 4.844 1.00 1.68 N ATOM 57 C ARG 5 -0.049 -7.721 3.017 1.00 1.68 C ATOM 58 O ARG 5 -0.975 -6.952 3.318 1.00 1.68 O ATOM 59 N LYS 6 1.237 -7.491 3.275 1.00 1.36 N ATOM 61 CA LYS 6 1.747 -6.314 3.946 1.00 1.36 C ATOM 62 CB LYS 6 3.242 -6.399 4.253 1.00 1.36 C ATOM 63 CG LYS 6 3.587 -6.480 5.746 1.00 1.36 C ATOM 64 CD LYS 6 4.832 -5.647 6.149 1.00 1.36 C ATOM 65 CE LYS 6 6.172 -6.397 6.037 1.00 1.36 C ATOM 66 NZ LYS 6 6.574 -6.647 4.628 1.00 1.36 N ATOM 70 C LYS 6 1.449 -5.067 3.109 1.00 1.36 C ATOM 71 O LYS 6 1.325 -4.017 3.691 1.00 1.36 O ATOM 72 N LYS 7 1.203 -5.193 1.786 1.00 1.37 N ATOM 74 CA LYS 7 1.019 -4.023 0.872 1.00 1.37 C ATOM 75 CB LYS 7 0.408 -4.433 -0.470 1.00 1.37 C ATOM 76 CG LYS 7 1.426 -4.714 -1.562 1.00 1.37 C ATOM 77 CD LYS 7 0.741 -5.065 -2.878 1.00 1.37 C ATOM 78 CE LYS 7 1.742 -5.318 -4.003 1.00 1.37 C ATOM 79 NZ LYS 7 2.547 -6.563 -3.818 1.00 1.37 N ATOM 83 C LYS 7 0.193 -2.897 1.494 1.00 1.37 C ATOM 84 O LYS 7 0.446 -1.717 1.207 1.00 1.37 O ATOM 85 N CYS 8 -0.771 -3.255 2.347 1.00 1.61 N ATOM 87 CA CYS 8 -1.548 -2.256 3.102 1.00 1.61 C ATOM 88 CB CYS 8 -2.750 -2.924 3.778 1.00 1.61 C ATOM 89 SG CYS 8 -3.909 -3.708 2.635 1.00 1.61 S ATOM 90 C CYS 8 -0.596 -1.643 4.172 1.00 1.61 C ATOM 91 O CYS 8 -0.403 -0.418 4.222 1.00 1.61 O ATOM 92 N THR 9 0.080 -2.533 4.920 1.00 1.56 N ATOM 94 CA THR 9 1.063 -2.200 5.981 1.00 1.56 C ATOM 95 CB THR 9 1.430 -3.461 6.841 1.00 1.56 C ATOM 96 OG1 THR 9 0.334 -4.384 6.824 1.00 1.56 O ATOM 98 CG2 THR 9 1.705 -3.070 8.302 1.00 1.56 C ATOM 99 C THR 9 2.345 -1.604 5.344 1.00 1.56 C ATOM 100 O THR 9 2.982 -0.725 5.932 1.00 1.56 O ATOM 101 N GLU 10 2.690 -2.102 4.145 1.00 1.32 N ATOM 103 CA GLU 10 3.870 -1.718 3.343 1.00 1.32 C ATOM 104 CB GLU 10 4.104 -2.715 2.196 1.00 1.32 C ATOM 105 CG GLU 10 5.548 -2.833 1.678 1.00 1.32 C ATOM 106 CD GLU 10 5.624 -2.962 0.166 1.00 1.32 C ATOM 107 OE1 GLU 10 5.082 -3.942 -0.389 1.00 1.32 O ATOM 108 OE2 GLU 10 6.229 -2.074 -0.469 1.00 1.32 O ATOM 109 C GLU 10 3.814 -0.274 2.818 1.00 1.32 C ATOM 110 O GLU 10 4.863 0.336 2.656 1.00 1.32 O ATOM 111 N MET 11 2.615 0.225 2.480 1.00 1.32 N ATOM 113 CA MET 11 2.409 1.610 2.000 1.00 1.32 C ATOM 114 CG MET 11 0.633 2.953 0.604 1.00 1.32 C ATOM 115 SD MET 11 1.208 2.684 -1.091 1.00 1.32 S ATOM 116 CE MET 11 2.604 3.804 -1.157 1.00 1.32 C ATOM 117 C MET 11 2.790 2.523 3.191 1.00 1.32 C ATOM 118 O MET 11 3.527 3.508 3.023 1.00 1.32 O ATOM 119 CB MET 11 0.936 1.803 1.590 1.00 1.32 C ATOM 120 N LYS 12 2.359 2.100 4.392 1.00 1.60 N ATOM 122 CA LYS 12 2.636 2.786 5.670 1.00 1.60 C ATOM 123 CB LYS 12 1.814 2.163 6.808 1.00 1.60 C ATOM 124 CG LYS 12 0.312 2.410 6.724 1.00 1.60 C ATOM 125 CD LYS 12 -0.416 1.777 7.900 1.00 1.60 C ATOM 126 CE LYS 12 -1.912 2.031 7.827 1.00 1.60 C ATOM 127 NZ LYS 12 -2.633 1.431 8.983 1.00 1.60 N ATOM 131 C LYS 12 4.141 2.667 5.985 1.00 1.60 C ATOM 132 O LYS 12 4.765 3.632 6.432 1.00 1.60 O ATOM 133 N LYS 13 4.685 1.465 5.739 1.00 1.83 N ATOM 135 CA LYS 13 6.100 1.073 5.918 1.00 1.83 C ATOM 136 CB LYS 13 6.214 -0.465 5.909 1.00 1.83 C ATOM 137 CG LYS 13 7.570 -1.085 6.326 1.00 1.83 C ATOM 138 CD LYS 13 7.574 -2.631 6.289 1.00 1.83 C ATOM 139 CE LYS 13 7.482 -3.254 4.881 1.00 1.83 C ATOM 140 NZ LYS 13 8.555 -2.839 3.958 1.00 1.83 N ATOM 144 C LYS 13 7.054 1.724 4.884 1.00 1.83 C ATOM 145 O LYS 13 8.212 1.980 5.209 1.00 1.83 O ATOM 146 N LYS 14 6.557 1.955 3.654 1.00 1.86 N ATOM 148 CA LYS 14 7.306 2.549 2.517 1.00 1.86 C ATOM 149 CB LYS 14 6.418 2.691 1.274 1.00 1.86 C ATOM 150 CG LYS 14 6.567 1.563 0.264 1.00 1.86 C ATOM 151 CD LYS 14 5.761 1.845 -0.993 1.00 1.86 C ATOM 152 CE LYS 14 5.966 0.763 -2.042 1.00 1.86 C ATOM 153 NZ LYS 14 5.217 1.060 -3.295 1.00 1.86 N ATOM 157 C LYS 14 7.896 3.903 2.898 1.00 1.86 C ATOM 158 O LYS 14 8.952 4.290 2.382 1.00 1.86 O ATOM 159 N PHE 15 7.176 4.626 3.768 1.00 1.90 N ATOM 161 CA PHE 15 7.614 5.922 4.316 1.00 1.90 C ATOM 162 CB PHE 15 6.557 6.502 5.288 1.00 1.90 C ATOM 163 CG PHE 15 5.255 6.948 4.626 1.00 1.90 C ATOM 164 CD1 PHE 15 5.130 8.242 4.062 1.00 1.90 C ATOM 165 CD2 PHE 15 4.128 6.093 4.604 1.00 1.90 C ATOM 166 CE1 PHE 15 3.905 8.676 3.483 1.00 1.90 C ATOM 167 CE2 PHE 15 2.896 6.513 4.029 1.00 1.90 C ATOM 168 CZ PHE 15 2.785 7.808 3.468 1.00 1.90 C ATOM 169 C PHE 15 8.948 5.699 5.061 1.00 1.90 C ATOM 170 O PHE 15 9.813 6.581 5.057 1.00 1.90 O ATOM 171 N LYS 16 9.084 4.518 5.685 1.00 2.39 N ATOM 173 CA LYS 16 10.280 4.091 6.444 1.00 2.39 C ATOM 174 CB LYS 16 9.883 3.616 7.854 1.00 2.39 C ATOM 175 CG LYS 16 9.401 4.721 8.789 1.00 2.39 C ATOM 176 CD LYS 16 9.055 4.170 10.162 1.00 2.39 C ATOM 177 CE LYS 16 8.588 5.272 11.099 1.00 2.39 C ATOM 178 NZ LYS 16 8.256 4.747 12.452 1.00 2.39 N ATOM 182 C LYS 16 11.139 3.006 5.737 1.00 2.39 C ATOM 183 O LYS 16 12.179 3.340 5.156 1.00 2.39 O ATOM 184 N ASN 17 10.702 1.734 5.788 1.00 2.46 N ATOM 186 CA ASN 17 11.409 0.573 5.195 1.00 2.46 C ATOM 187 CB ASN 17 11.733 -0.472 6.284 1.00 2.46 C ATOM 188 CG ASN 17 12.718 0.043 7.327 1.00 2.46 C ATOM 189 OD1 ASN 17 12.322 0.622 8.341 1.00 2.46 O ATOM 190 ND2 ASN 17 14.007 -0.184 7.090 1.00 2.46 N ATOM 193 C ASN 17 10.658 -0.151 4.064 1.00 2.46 C ATOM 194 O ASN 17 9.442 0.010 3.920 1.00 2.46 O ATOM 195 N CYS 18 11.407 -0.938 3.274 1.00 2.61 N ATOM 197 CA CYS 18 10.881 -1.760 2.169 1.00 2.61 C ATOM 198 CB CYS 18 11.300 -1.219 0.796 1.00 2.61 C ATOM 199 SG CYS 18 10.736 0.465 0.453 1.00 2.61 S ATOM 200 C CYS 18 11.377 -3.204 2.380 1.00 2.61 C ATOM 201 O CYS 18 10.640 -4.016 2.946 1.00 2.61 O ATOM 202 N GLU 19 12.635 -3.496 1.985 1.00 2.64 N ATOM 204 CA GLU 19 13.325 -4.816 2.104 1.00 2.64 C ATOM 205 CB GLU 19 13.936 -5.007 3.507 1.00 2.64 C ATOM 206 CG GLU 19 15.109 -4.082 3.824 1.00 2.64 C ATOM 207 CD GLU 19 15.684 -4.316 5.210 1.00 2.64 C ATOM 208 OE1 GLU 19 15.218 -3.664 6.166 1.00 2.64 O ATOM 209 OE2 GLU 19 16.605 -5.150 5.340 1.00 2.64 O ATOM 210 C GLU 19 12.549 -6.091 1.716 1.00 2.64 C ATOM 211 O GLU 19 11.353 -6.198 2.006 1.00 2.64 O ATOM 212 N VAL 20 13.241 -7.066 1.103 1.00 2.83 N ATOM 214 CA VAL 20 12.606 -8.338 0.702 1.00 2.83 C ATOM 215 CB VAL 20 12.954 -8.726 -0.798 1.00 2.83 C ATOM 216 CG1 VAL 20 11.954 -9.744 -1.356 1.00 2.83 C ATOM 217 CG2 VAL 20 12.993 -7.487 -1.693 1.00 2.83 C ATOM 218 C VAL 20 13.144 -9.413 1.677 1.00 2.83 C ATOM 219 O VAL 20 14.360 -9.632 1.783 1.00 2.83 O ATOM 220 N ARG 21 12.210 -10.014 2.427 1.00 2.63 N ATOM 222 CA ARG 21 12.465 -11.070 3.422 1.00 2.63 C ATOM 223 CB ARG 21 12.482 -10.522 4.861 1.00 2.63 C ATOM 224 CG ARG 21 13.745 -9.733 5.217 1.00 2.63 C ATOM 225 CD ARG 21 13.918 -9.552 6.722 1.00 2.63 C ATOM 226 NE ARG 21 14.310 -10.793 7.397 1.00 2.63 N ATOM 228 CZ ARG 21 14.756 -10.879 8.651 1.00 2.63 C ATOM 229 NH1 ARG 21 15.079 -12.063 9.150 1.00 2.63 N ATOM 232 NH2 ARG 21 14.884 -9.796 9.411 1.00 2.63 N ATOM 235 C ARG 21 11.474 -12.231 3.319 1.00 2.63 C ATOM 236 O ARG 21 10.308 -12.018 2.963 1.00 2.63 O ATOM 237 N CYS 22 11.948 -13.446 3.621 1.00 3.41 N ATOM 239 CA CYS 22 11.136 -14.677 3.622 1.00 3.41 C ATOM 240 CB CYS 22 11.884 -15.804 2.899 1.00 3.41 C ATOM 241 SG CYS 22 10.975 -17.366 2.770 1.00 3.41 S ATOM 242 C CYS 22 10.940 -15.022 5.116 1.00 3.41 C ATOM 243 O CYS 22 10.305 -16.026 5.469 1.00 3.41 O ATOM 244 N ASP 23 11.452 -14.114 5.962 1.00 3.78 N ATOM 246 CA ASP 23 11.408 -14.176 7.432 1.00 3.78 C ATOM 247 CB ASP 23 12.841 -14.115 7.990 1.00 3.78 C ATOM 248 CG ASP 23 13.670 -15.347 7.640 1.00 3.78 C ATOM 249 OD1 ASP 23 13.670 -16.315 8.433 1.00 3.78 O ATOM 250 OD2 ASP 23 14.336 -15.343 6.581 1.00 3.78 O ATOM 251 C ASP 23 10.579 -12.972 7.933 1.00 3.78 C ATOM 252 O ASP 23 9.729 -12.475 7.189 1.00 3.78 O ATOM 253 N GLU 24 10.817 -12.523 9.177 1.00 4.46 N ATOM 255 CA GLU 24 10.116 -11.376 9.786 1.00 4.46 C ATOM 256 CB GLU 24 9.649 -11.710 11.210 1.00 4.46 C ATOM 257 CG GLU 24 8.536 -12.750 11.296 1.00 4.46 C ATOM 258 CD GLU 24 8.102 -13.028 12.724 1.00 4.46 C ATOM 259 OE1 GLU 24 7.174 -12.346 13.208 1.00 4.46 O ATOM 260 OE2 GLU 24 8.687 -13.928 13.362 1.00 4.46 O ATOM 261 C GLU 24 10.990 -10.106 9.797 1.00 4.46 C ATOM 262 O GLU 24 12.154 -10.154 10.222 1.00 4.46 O ATOM 263 N SER 25 10.427 -8.995 9.298 1.00 4.16 N ATOM 265 CA SER 25 11.106 -7.687 9.220 1.00 4.16 C ATOM 266 CB SER 25 11.180 -7.198 7.757 1.00 4.16 C ATOM 267 OG SER 25 9.892 -7.080 7.176 1.00 4.16 O ATOM 269 C SER 25 10.436 -6.628 10.121 1.00 4.16 C ATOM 270 O SER 25 10.910 -6.382 11.237 1.00 4.16 O ATOM 271 N ASN 26 9.347 -6.017 9.628 1.00 4.62 N ATOM 273 CA ASN 26 8.568 -4.980 10.330 1.00 4.62 C ATOM 274 CB ASN 26 8.779 -3.602 9.668 1.00 4.62 C ATOM 275 CG ASN 26 10.211 -3.093 9.799 1.00 4.62 C ATOM 276 OD1 ASN 26 10.553 -2.404 10.763 1.00 4.62 O ATOM 277 ND2 ASN 26 11.048 -3.415 8.816 1.00 4.62 N ATOM 280 C ASN 26 7.086 -5.369 10.257 1.00 4.62 C ATOM 281 O ASN 26 6.546 -5.521 9.152 1.00 4.62 O ATOM 282 N HIS 27 6.440 -5.537 11.430 1.00 4.20 N ATOM 284 CA HIS 27 5.009 -5.935 11.611 1.00 4.20 C ATOM 285 CG HIS 27 2.679 -4.840 11.686 1.00 4.20 C ATOM 286 CD2 HIS 27 2.073 -3.912 12.467 1.00 4.20 C ATOM 287 ND1 HIS 27 1.767 -5.863 11.533 1.00 4.20 N ATOM 289 CE1 HIS 27 0.660 -5.569 12.191 1.00 4.20 C ATOM 290 NE2 HIS 27 0.820 -4.390 12.767 1.00 4.20 N ATOM 292 C HIS 27 4.732 -7.319 10.975 1.00 4.20 C ATOM 293 O HIS 27 4.356 -8.273 11.666 1.00 4.20 O ATOM 294 CB HIS 27 4.039 -4.857 11.043 1.00 4.20 C ATOM 295 N CYS 28 4.930 -7.376 9.650 1.00 3.69 N ATOM 297 CA CYS 28 4.793 -8.532 8.747 1.00 3.69 C ATOM 298 CB CYS 28 6.145 -9.248 8.565 1.00 3.69 C ATOM 299 SG CYS 28 6.851 -9.893 10.098 1.00 3.69 S ATOM 300 C CYS 28 3.674 -9.574 8.821 1.00 3.69 C ATOM 301 O CYS 28 3.388 -10.146 9.881 1.00 3.69 O ATOM 302 N VAL 29 3.039 -9.757 7.653 1.00 3.74 N ATOM 304 CA VAL 29 1.985 -10.751 7.380 1.00 3.74 C ATOM 305 CB VAL 29 0.653 -10.086 6.858 1.00 3.74 C ATOM 306 CG1 VAL 29 -0.500 -11.102 6.856 1.00 3.74 C ATOM 307 CG2 VAL 29 0.273 -8.879 7.716 1.00 3.74 C ATOM 308 C VAL 29 2.764 -11.421 6.224 1.00 3.74 C ATOM 309 O VAL 29 3.135 -10.742 5.253 1.00 3.74 O ATOM 310 N GLU 30 3.031 -12.725 6.334 1.00 3.27 N ATOM 312 CA GLU 30 3.836 -13.427 5.323 1.00 3.27 C ATOM 313 CB GLU 30 5.308 -13.573 5.797 1.00 3.27 C ATOM 314 CG GLU 30 5.525 -14.173 7.204 1.00 3.27 C ATOM 315 CD GLU 30 6.985 -14.222 7.603 1.00 3.27 C ATOM 316 OE1 GLU 30 7.441 -13.291 8.299 1.00 3.27 O ATOM 317 OE2 GLU 30 7.678 -15.192 7.226 1.00 3.27 O ATOM 318 C GLU 30 3.367 -14.736 4.685 1.00 3.27 C ATOM 319 O GLU 30 2.740 -15.576 5.339 1.00 3.27 O ATOM 320 N VAL 31 3.681 -14.856 3.386 1.00 2.98 N ATOM 322 CA VAL 31 3.436 -16.041 2.545 1.00 2.98 C ATOM 323 CB VAL 31 2.593 -15.693 1.251 1.00 2.98 C ATOM 324 CG1 VAL 31 2.112 -16.972 0.549 1.00 2.98 C ATOM 325 CG2 VAL 31 1.393 -14.817 1.601 1.00 2.98 C ATOM 326 C VAL 31 4.921 -16.305 2.194 1.00 2.98 C ATOM 327 O VAL 31 5.610 -15.395 1.703 1.00 2.98 O ATOM 328 N ARG 32 5.422 -17.515 2.474 1.00 3.27 N ATOM 330 CA ARG 32 6.840 -17.829 2.224 1.00 3.27 C ATOM 331 CB ARG 32 7.627 -17.982 3.554 1.00 3.27 C ATOM 332 CG ARG 32 7.000 -18.896 4.635 1.00 3.27 C ATOM 333 CD ARG 32 7.979 -19.229 5.760 1.00 3.27 C ATOM 334 NE ARG 32 8.333 -18.071 6.588 1.00 3.27 N ATOM 336 CZ ARG 32 9.180 -18.098 7.618 1.00 3.27 C ATOM 337 NH1 ARG 32 9.424 -16.984 8.296 1.00 3.27 N ATOM 340 NH2 ARG 32 9.788 -19.223 7.980 1.00 3.27 N ATOM 343 C ARG 32 7.208 -18.958 1.251 1.00 3.27 C ATOM 344 O ARG 32 6.720 -20.089 1.368 1.00 3.27 O ATOM 345 N CYS 33 8.045 -18.590 0.273 1.00 5.03 N ATOM 347 CA CYS 33 8.609 -19.469 -0.763 1.00 5.03 C ATOM 348 CB CYS 33 8.009 -19.146 -2.144 1.00 5.03 C ATOM 349 SG CYS 33 8.189 -17.434 -2.701 1.00 5.03 S ATOM 350 C CYS 33 10.114 -19.150 -0.725 1.00 5.03 C ATOM 351 O CYS 33 10.957 -20.053 -0.650 1.00 5.03 O ATOM 352 N SER 34 10.404 -17.839 -0.774 1.00 5.07 N ATOM 354 CA SER 34 11.737 -17.194 -0.738 1.00 5.07 C ATOM 355 CB SER 34 12.606 -17.575 -1.950 1.00 5.07 C ATOM 356 OG SER 34 13.930 -17.085 -1.817 1.00 5.07 O ATOM 358 C SER 34 11.409 -15.695 -0.807 1.00 5.07 C ATOM 359 O SER 34 12.034 -14.877 -0.125 1.00 5.07 O ATOM 360 N ASP 35 10.449 -15.368 -1.690 1.00 4.84 N ATOM 362 CA ASP 35 9.915 -14.014 -1.959 1.00 4.84 C ATOM 363 CB ASP 35 10.957 -13.082 -2.651 1.00 4.84 C ATOM 364 CG ASP 35 11.836 -13.806 -3.684 1.00 4.84 C ATOM 365 OD1 ASP 35 11.397 -13.987 -4.840 1.00 4.84 O ATOM 366 OD2 ASP 35 12.971 -14.190 -3.328 1.00 4.84 O ATOM 367 C ASP 35 8.626 -14.157 -2.803 1.00 4.84 C ATOM 368 O ASP 35 8.692 -14.393 -4.020 1.00 4.84 O ATOM 369 N THR 36 7.467 -14.067 -2.132 1.00 4.18 N ATOM 371 CA THR 36 6.126 -14.194 -2.751 1.00 4.18 C ATOM 372 CB THR 36 5.070 -14.689 -1.722 1.00 4.18 C ATOM 373 OG1 THR 36 5.158 -13.906 -0.525 1.00 4.18 O ATOM 375 CG2 THR 36 5.291 -16.162 -1.392 1.00 4.18 C ATOM 376 C THR 36 5.635 -12.901 -3.433 1.00 4.18 C ATOM 377 O THR 36 5.288 -11.919 -2.755 1.00 4.18 O ATOM 378 N LYS 37 5.661 -12.902 -4.782 1.00 4.32 N ATOM 380 CA LYS 37 5.270 -11.776 -5.685 1.00 4.32 C ATOM 381 CB LYS 37 3.784 -11.390 -5.537 1.00 4.32 C ATOM 382 CG LYS 37 2.800 -12.461 -5.994 1.00 4.32 C ATOM 383 CD LYS 37 1.358 -12.002 -5.806 1.00 4.32 C ATOM 384 CE LYS 37 0.352 -13.069 -6.232 1.00 4.32 C ATOM 385 NZ LYS 37 0.326 -13.318 -7.705 1.00 4.32 N ATOM 389 C LYS 37 6.175 -10.534 -5.526 1.00 4.32 C ATOM 390 O LYS 37 6.292 -9.712 -6.443 1.00 4.32 O ATOM 391 N TYR 38 6.832 -10.468 -4.357 1.00 3.92 N ATOM 393 CA TYR 38 7.785 -9.446 -3.875 1.00 3.92 C ATOM 394 CB TYR 38 9.226 -10.028 -3.877 1.00 3.92 C ATOM 395 CG TYR 38 9.797 -10.496 -5.230 1.00 3.92 C ATOM 396 CD1 TYR 38 9.482 -11.771 -5.763 1.00 3.92 C ATOM 397 CE1 TYR 38 10.031 -12.210 -7.002 1.00 3.92 C ATOM 398 CD2 TYR 38 10.678 -9.671 -5.970 1.00 3.92 C ATOM 399 CE2 TYR 38 11.230 -10.102 -7.208 1.00 3.92 C ATOM 400 CZ TYR 38 10.901 -11.369 -7.712 1.00 3.92 C ATOM 401 OH TYR 38 11.434 -11.792 -8.909 1.00 3.92 O ATOM 403 C TYR 38 7.820 -7.989 -4.373 1.00 3.92 C ATOM 404 O TYR 38 7.633 -7.715 -5.565 1.00 3.92 O ATOM 405 N THR 39 8.085 -7.084 -3.421 1.00 4.11 N ATOM 407 CA THR 39 8.234 -5.636 -3.633 1.00 4.11 C ATOM 408 CB THR 39 7.345 -4.818 -2.645 1.00 4.11 C ATOM 409 OG1 THR 39 6.114 -5.521 -2.432 1.00 4.11 O ATOM 411 CG2 THR 39 7.013 -3.436 -3.223 1.00 4.11 C ATOM 412 C THR 39 9.737 -5.440 -3.325 1.00 4.11 C ATOM 413 O THR 39 10.268 -6.096 -2.415 1.00 4.11 O ATOM 414 N LEU 40 10.408 -4.564 -4.080 1.00 3.81 N ATOM 416 CA LEU 40 11.852 -4.332 -3.920 1.00 3.81 C ATOM 417 CB LEU 40 12.578 -4.517 -5.278 1.00 3.81 C ATOM 418 CG LEU 40 12.668 -5.759 -6.214 1.00 3.81 C ATOM 419 CD1 LEU 40 13.419 -6.941 -5.574 1.00 3.81 C ATOM 420 CD2 LEU 40 11.301 -6.202 -6.765 1.00 3.81 C ATOM 421 C LEU 40 12.252 -2.992 -3.293 1.00 3.81 C ATOM 422 O LEU 40 11.532 -1.994 -3.422 1.00 3.81 O ATOM 423 N CYS 41 13.411 -3.003 -2.617 1.00 3.87 N ATOM 425 CA CYS 41 14.001 -1.848 -1.922 1.00 3.87 C ATOM 426 CB CYS 41 14.561 -2.303 -0.568 1.00 3.87 C ATOM 427 SG CYS 41 15.136 -0.968 0.518 1.00 3.87 S ATOM 428 C CYS 41 15.105 -1.193 -2.761 1.00 3.87 C ATOM 429 O CYS 41 15.781 -1.922 -3.518 1.00 3.87 O ATOM 430 OXT CYS 41 15.271 0.041 -2.655 1.00 3.87 O TER END