####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS152_4 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS152_4.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 3 - 23 4.91 10.66 LCS_AVERAGE: 47.47 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 4 - 14 1.94 17.32 LONGEST_CONTINUOUS_SEGMENT: 11 5 - 15 1.75 18.05 LONGEST_CONTINUOUS_SEGMENT: 11 6 - 16 1.77 18.53 LCS_AVERAGE: 20.64 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 6 - 14 0.69 18.35 LCS_AVERAGE: 15.11 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 7 9 16 3 6 7 7 9 10 11 11 12 13 14 14 15 15 16 18 20 20 24 25 LCS_GDT Q 2 Q 2 7 9 20 3 6 7 7 9 10 11 13 14 15 15 21 22 25 27 29 31 31 32 32 LCS_GDT E 3 E 3 7 9 21 5 6 7 7 9 10 11 13 14 15 15 15 15 25 27 29 31 31 32 32 LCS_GDT T 4 T 4 7 11 21 5 6 7 7 9 11 12 13 14 15 18 21 22 25 27 29 31 31 32 32 LCS_GDT R 5 R 5 7 11 21 5 6 7 8 10 11 12 13 14 17 18 21 22 25 27 29 31 31 32 32 LCS_GDT K 6 K 6 9 11 21 5 7 9 10 10 11 12 13 14 17 18 21 22 25 27 29 31 31 32 32 LCS_GDT K 7 K 7 9 11 21 5 8 9 10 10 11 12 13 14 17 18 21 22 25 27 29 31 31 32 32 LCS_GDT C 8 C 8 9 11 21 5 8 9 10 10 11 12 13 14 17 18 20 20 22 25 29 31 31 32 32 LCS_GDT T 9 T 9 9 11 21 6 8 9 10 10 11 12 13 14 17 18 21 22 25 27 29 31 31 32 32 LCS_GDT E 10 E 10 9 11 21 6 8 9 10 10 11 12 13 14 17 18 21 22 25 27 29 31 31 32 32 LCS_GDT M 11 M 11 9 11 21 6 8 9 10 10 11 12 13 14 17 18 21 22 25 27 29 31 31 32 32 LCS_GDT K 12 K 12 9 11 21 6 8 9 10 10 11 12 13 14 15 18 21 22 25 27 29 31 31 32 32 LCS_GDT K 13 K 13 9 11 21 6 8 9 10 10 11 12 13 14 17 18 21 22 25 27 29 31 31 32 32 LCS_GDT K 14 K 14 9 11 21 6 8 9 10 10 11 12 13 14 17 18 21 22 25 27 29 31 31 32 32 LCS_GDT F 15 F 15 7 11 21 3 4 7 10 10 11 12 13 14 17 18 21 22 25 27 29 31 31 32 32 LCS_GDT K 16 K 16 4 11 21 3 4 4 7 8 9 12 12 14 17 18 21 22 25 27 29 31 31 32 32 LCS_GDT N 17 N 17 6 7 21 3 6 6 6 7 8 10 12 14 17 18 21 22 25 27 29 31 31 32 32 LCS_GDT C 18 C 18 6 7 21 3 6 6 6 7 8 10 12 14 17 18 21 22 25 27 29 31 31 32 32 LCS_GDT E 19 E 19 6 7 21 3 6 6 6 7 8 10 12 14 17 18 21 22 25 27 29 31 31 32 32 LCS_GDT V 20 V 20 6 7 21 3 6 6 6 7 8 10 12 14 17 18 21 22 25 27 29 31 31 32 32 LCS_GDT R 21 R 21 6 7 21 3 6 6 6 7 8 10 12 14 17 18 21 22 25 27 29 31 31 32 32 LCS_GDT C 22 C 22 6 7 21 3 6 6 6 7 7 9 11 13 16 17 21 22 25 27 29 31 31 32 32 LCS_GDT D 23 D 23 4 7 21 3 4 5 6 7 7 9 11 14 16 17 21 22 25 27 29 31 31 32 32 LCS_GDT E 24 E 24 4 6 20 3 3 4 6 6 6 9 10 10 11 16 17 22 25 27 29 31 31 32 32 LCS_GDT S 25 S 25 4 7 20 3 3 4 6 7 7 9 10 11 11 12 14 20 25 27 29 31 31 32 32 LCS_GDT N 26 N 26 5 7 20 1 5 6 6 7 8 9 10 13 14 17 21 22 25 27 29 31 31 32 32 LCS_GDT H 27 H 27 5 7 20 3 5 6 6 7 8 9 10 14 16 17 21 22 25 27 29 31 31 32 32 LCS_GDT C 28 C 28 5 7 20 3 5 6 6 7 8 10 12 14 17 18 21 22 25 27 29 31 31 32 32 LCS_GDT V 29 V 29 5 8 17 3 5 6 6 7 8 9 10 14 16 18 20 22 25 27 29 31 31 32 32 LCS_GDT E 30 E 30 5 8 17 3 5 6 6 7 8 9 10 13 13 16 18 20 22 24 25 28 28 30 31 LCS_GDT V 31 V 31 5 8 17 3 5 6 6 7 8 9 10 12 13 16 16 17 22 24 25 28 28 29 31 LCS_GDT R 32 R 32 5 8 17 3 5 5 6 7 8 9 10 13 14 16 18 20 22 24 25 28 28 30 31 LCS_GDT C 33 C 33 5 8 17 3 5 5 6 7 8 9 10 13 14 16 18 20 22 24 25 28 28 30 31 LCS_GDT S 34 S 34 5 8 17 3 5 5 6 7 8 9 10 13 14 16 18 20 22 24 25 28 28 30 31 LCS_GDT D 35 D 35 5 8 17 3 5 5 6 7 8 9 9 11 14 16 18 20 22 24 25 28 28 30 31 LCS_GDT T 36 T 36 4 8 17 3 4 4 5 7 8 9 10 13 14 16 18 20 22 24 25 28 28 30 31 LCS_GDT K 37 K 37 5 6 17 4 5 5 5 7 8 9 10 13 14 16 16 20 22 24 25 28 28 30 31 LCS_GDT Y 38 Y 38 5 6 17 4 5 5 5 7 8 9 10 13 14 16 18 20 22 24 25 28 31 32 32 LCS_GDT T 39 T 39 5 6 17 4 5 5 5 7 8 9 10 13 14 16 18 20 22 27 29 31 31 32 32 LCS_GDT L 40 L 40 5 6 17 4 5 5 5 7 8 9 10 13 14 16 18 21 23 27 29 31 31 32 32 LCS_GDT C 41 C 41 5 6 17 3 5 5 5 7 7 9 10 13 14 16 18 20 22 27 29 31 31 32 32 LCS_AVERAGE LCS_A: 27.74 ( 15.11 20.64 47.47 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 8 9 10 10 11 12 13 14 17 18 21 22 25 27 29 31 31 32 32 GDT PERCENT_AT 14.63 19.51 21.95 24.39 24.39 26.83 29.27 31.71 34.15 41.46 43.90 51.22 53.66 60.98 65.85 70.73 75.61 75.61 78.05 78.05 GDT RMS_LOCAL 0.26 0.56 0.69 1.17 1.17 1.94 2.21 2.68 2.96 3.84 3.89 4.48 4.54 5.21 5.39 5.64 5.87 5.87 6.19 6.19 GDT RMS_ALL_AT 19.14 18.54 18.35 18.48 18.48 17.32 17.28 16.72 16.62 10.66 10.61 10.51 10.56 10.94 10.90 10.73 10.56 10.56 10.26 10.26 # Checking swapping # possible swapping detected: D 35 D 35 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 7.235 0 0.224 0.503 11.340 2.727 1.818 11.340 LGA Q 2 Q 2 4.380 0 0.194 0.846 5.814 22.273 10.707 4.611 LGA E 3 E 3 3.844 0 0.053 1.337 10.691 23.182 10.303 9.430 LGA T 4 T 4 1.796 0 0.058 1.263 5.494 51.364 31.948 5.375 LGA R 5 R 5 2.279 0 0.073 1.067 4.619 40.000 33.884 2.304 LGA K 6 K 6 2.743 0 0.150 1.211 6.246 30.909 16.970 5.200 LGA K 7 K 7 2.881 0 0.029 0.602 3.401 27.273 25.455 2.542 LGA C 8 C 8 2.341 0 0.028 0.773 2.550 41.818 40.606 2.049 LGA T 9 T 9 1.188 0 0.076 0.278 1.666 65.909 61.558 1.607 LGA E 10 E 10 2.000 0 0.060 0.610 5.646 51.364 29.091 4.032 LGA M 11 M 11 0.781 0 0.059 1.303 8.721 70.000 42.045 8.721 LGA K 12 K 12 1.778 0 0.044 0.548 4.096 47.273 30.303 4.002 LGA K 13 K 13 3.293 0 0.081 1.627 7.982 16.818 9.495 7.982 LGA K 14 K 14 3.133 0 0.037 0.715 5.633 12.727 19.192 5.633 LGA F 15 F 15 6.331 0 0.473 1.183 11.423 1.364 0.496 10.931 LGA K 16 K 16 10.578 0 0.641 1.407 13.053 0.000 0.000 8.337 LGA N 17 N 17 16.723 0 0.615 1.390 20.625 0.000 0.000 17.270 LGA C 18 C 18 20.636 0 0.195 0.766 22.808 0.000 0.000 22.808 LGA E 19 E 19 22.805 0 0.175 0.713 30.547 0.000 0.000 30.547 LGA V 20 V 20 18.545 0 0.067 0.136 19.663 0.000 0.000 15.006 LGA R 21 R 21 20.153 0 0.090 1.387 28.759 0.000 0.000 28.759 LGA C 22 C 22 17.372 0 0.652 1.116 20.460 0.000 0.000 15.998 LGA D 23 D 23 19.810 0 0.641 1.187 22.072 0.000 0.000 20.657 LGA E 24 E 24 20.509 0 0.073 1.017 23.837 0.000 0.000 22.568 LGA S 25 S 25 23.884 0 0.291 0.277 25.644 0.000 0.000 25.644 LGA N 26 N 26 23.618 0 0.578 0.844 24.919 0.000 0.000 22.179 LGA H 27 H 27 18.440 0 0.627 1.038 20.204 0.000 0.000 18.040 LGA C 28 C 28 16.606 0 0.130 0.222 19.179 0.000 0.000 19.179 LGA V 29 V 29 13.997 0 0.070 1.048 14.585 0.000 0.000 11.975 LGA E 30 E 30 17.103 0 0.108 1.034 24.464 0.000 0.000 23.818 LGA V 31 V 31 18.529 0 0.125 0.161 20.450 0.000 0.000 18.750 LGA R 32 R 32 24.384 0 0.138 1.022 32.526 0.000 0.000 30.553 LGA C 33 C 33 26.159 0 0.293 0.953 29.482 0.000 0.000 22.648 LGA S 34 S 34 31.784 0 0.544 0.826 35.122 0.000 0.000 35.122 LGA D 35 D 35 30.981 0 0.484 0.390 34.731 0.000 0.000 32.874 LGA T 36 T 36 23.967 0 0.074 0.886 26.381 0.000 0.000 23.561 LGA K 37 K 37 20.337 0 0.651 1.514 21.630 0.000 0.000 18.808 LGA Y 38 Y 38 19.405 0 0.164 1.396 20.065 0.000 0.000 18.195 LGA T 39 T 39 17.010 0 0.161 0.254 19.273 0.000 0.000 16.622 LGA L 40 L 40 17.158 0 0.605 1.193 17.668 0.000 0.000 17.668 LGA C 41 C 41 17.513 0 0.199 0.740 20.653 0.000 0.000 20.653 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 8.735 8.544 9.525 12.317 8.875 4.080 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 13 2.68 36.585 31.573 0.467 LGA_LOCAL RMSD: 2.682 Number of atoms: 13 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 16.725 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 8.735 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.089255 * X + -0.386159 * Y + 0.918104 * Z + 5.289231 Y_new = -0.905631 * X + 0.352207 * Y + 0.236182 * Z + -8.335501 Z_new = -0.414567 * X + -0.852544 * Y + -0.318282 * Z + 4.722069 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.472558 0.427467 -1.928104 [DEG: -84.3714 24.4920 -110.4722 ] ZXZ: 1.822587 1.894713 -2.688989 [DEG: 104.4265 108.5591 -154.0677 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS152_4 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS152_4.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 13 2.68 31.573 8.74 REMARK ---------------------------------------------------------- MOLECULE T0955TS152_4 PFRMAT TS TARGET T0955 MODEL 4 PARENT N/A ATOM 1 CB SER 1 7.023 -11.540 2.330 1.00 1.72 C ATOM 2 OG SER 1 7.300 -10.257 1.801 1.00 1.72 O ATOM 4 C SER 1 4.652 -11.937 1.625 1.00 1.72 C ATOM 5 O SER 1 3.859 -11.768 0.691 1.00 1.72 O ATOM 8 N SER 1 6.528 -12.166 -0.038 1.00 1.72 N ATOM 10 CA SER 1 6.108 -12.351 1.380 1.00 1.72 C ATOM 11 N GLN 2 4.353 -11.791 2.919 1.00 1.18 N ATOM 13 CA GLN 2 3.100 -11.357 3.559 1.00 1.18 C ATOM 14 CB GLN 2 3.322 -11.372 5.064 1.00 1.18 C ATOM 15 CG GLN 2 3.595 -12.764 5.579 1.00 1.18 C ATOM 16 CD GLN 2 2.935 -13.051 6.895 1.00 1.18 C ATOM 17 OE1 GLN 2 1.752 -13.376 6.941 1.00 1.18 O ATOM 18 NE2 GLN 2 3.697 -12.972 7.975 1.00 1.18 N ATOM 21 C GLN 2 2.815 -9.938 3.091 1.00 1.18 C ATOM 22 O GLN 2 1.662 -9.502 2.973 1.00 1.18 O ATOM 23 N GLU 3 3.932 -9.286 2.760 1.00 1.32 N ATOM 25 CA GLU 3 4.076 -7.912 2.306 1.00 1.32 C ATOM 26 CB GLU 3 5.567 -7.674 2.029 1.00 1.32 C ATOM 27 CG GLU 3 5.949 -6.367 1.322 1.00 1.32 C ATOM 28 CD GLU 3 7.374 -6.364 0.827 1.00 1.32 C ATOM 29 OE1 GLU 3 8.276 -5.974 1.598 1.00 1.32 O ATOM 30 OE2 GLU 3 7.593 -6.752 -0.340 1.00 1.32 O ATOM 31 C GLU 3 3.142 -7.495 1.134 1.00 1.32 C ATOM 32 O GLU 3 2.800 -6.319 1.045 1.00 1.32 O ATOM 33 N THR 4 2.747 -8.414 0.244 1.00 1.88 N ATOM 35 CA THR 4 1.840 -8.063 -0.877 1.00 1.88 C ATOM 36 CB THR 4 1.812 -9.181 -1.947 1.00 1.88 C ATOM 37 OG1 THR 4 1.844 -10.459 -1.303 1.00 1.88 O ATOM 39 CG2 THR 4 3.009 -9.057 -2.879 1.00 1.88 C ATOM 40 C THR 4 0.389 -7.640 -0.495 1.00 1.88 C ATOM 41 O THR 4 -0.041 -6.555 -0.901 1.00 1.88 O ATOM 42 N ARG 5 -0.323 -8.433 0.330 1.00 2.08 N ATOM 44 CA ARG 5 -1.700 -8.102 0.798 1.00 2.08 C ATOM 45 CB ARG 5 -2.353 -9.301 1.508 1.00 2.08 C ATOM 46 CG ARG 5 -3.895 -9.286 1.512 1.00 2.08 C ATOM 47 CD ARG 5 -4.496 -10.629 1.913 1.00 2.08 C ATOM 48 NE ARG 5 -4.388 -11.632 0.849 1.00 2.08 N ATOM 50 CZ ARG 5 -4.840 -12.884 0.924 1.00 2.08 C ATOM 51 NH1 ARG 5 -4.680 -13.699 -0.110 1.00 2.08 N ATOM 54 NH2 ARG 5 -5.453 -13.332 2.015 1.00 2.08 N ATOM 57 C ARG 5 -1.468 -6.928 1.761 1.00 2.08 C ATOM 58 O ARG 5 -2.202 -5.932 1.788 1.00 2.08 O ATOM 59 N LYS 6 -0.356 -7.067 2.477 1.00 1.48 N ATOM 61 CA LYS 6 0.176 -6.087 3.399 1.00 1.48 C ATOM 62 CB LYS 6 1.369 -6.599 4.205 1.00 1.48 C ATOM 63 CG LYS 6 0.986 -7.467 5.414 1.00 1.48 C ATOM 64 CD LYS 6 1.873 -7.176 6.642 1.00 1.48 C ATOM 65 CE LYS 6 3.052 -8.143 6.831 1.00 1.48 C ATOM 66 NZ LYS 6 3.932 -8.262 5.636 1.00 1.48 N ATOM 70 C LYS 6 0.483 -4.773 2.677 1.00 1.48 C ATOM 71 O LYS 6 0.616 -3.774 3.340 1.00 1.48 O ATOM 72 N LYS 7 0.531 -4.761 1.327 1.00 1.89 N ATOM 74 CA LYS 7 0.922 -3.569 0.519 1.00 1.89 C ATOM 75 CB LYS 7 0.450 -3.688 -0.933 1.00 1.89 C ATOM 76 CG LYS 7 1.557 -4.039 -1.920 1.00 1.89 C ATOM 77 CD LYS 7 1.018 -4.142 -3.343 1.00 1.89 C ATOM 78 CE LYS 7 2.112 -4.492 -4.349 1.00 1.89 C ATOM 79 NZ LYS 7 2.643 -5.880 -4.196 1.00 1.89 N ATOM 83 C LYS 7 0.411 -2.255 1.122 1.00 1.89 C ATOM 84 O LYS 7 1.071 -1.213 0.986 1.00 1.89 O ATOM 85 N CYS 8 -0.741 -2.312 1.802 1.00 2.00 N ATOM 87 CA CYS 8 -1.283 -1.157 2.548 1.00 2.00 C ATOM 88 CB CYS 8 -2.713 -1.456 3.015 1.00 2.00 C ATOM 89 SG CYS 8 -2.912 -2.998 3.948 1.00 2.00 S ATOM 90 C CYS 8 -0.337 -0.936 3.767 1.00 2.00 C ATOM 91 O CYS 8 0.117 0.184 4.027 1.00 2.00 O ATOM 92 N THR 9 -0.028 -2.039 4.471 1.00 1.83 N ATOM 94 CA THR 9 0.898 -2.084 5.630 1.00 1.83 C ATOM 95 CB THR 9 0.794 -3.440 6.414 1.00 1.83 C ATOM 96 OG1 THR 9 -0.518 -3.991 6.243 1.00 1.83 O ATOM 98 CG2 THR 9 1.034 -3.227 7.914 1.00 1.83 C ATOM 99 C THR 9 2.345 -1.852 5.107 1.00 1.83 C ATOM 100 O THR 9 3.187 -1.322 5.834 1.00 1.83 O ATOM 101 N GLU 10 2.618 -2.307 3.871 1.00 1.73 N ATOM 103 CA GLU 10 3.926 -2.186 3.185 1.00 1.73 C ATOM 104 CB GLU 10 3.963 -3.036 1.888 1.00 1.73 C ATOM 105 CG GLU 10 5.149 -2.849 0.900 1.00 1.73 C ATOM 106 CD GLU 10 4.790 -2.018 -0.328 1.00 1.73 C ATOM 107 OE1 GLU 10 4.427 -2.615 -1.363 1.00 1.73 O ATOM 108 OE2 GLU 10 4.877 -0.775 -0.254 1.00 1.73 O ATOM 109 C GLU 10 4.367 -0.730 2.949 1.00 1.73 C ATOM 110 O GLU 10 5.567 -0.454 3.008 1.00 1.73 O ATOM 111 N MET 11 3.424 0.171 2.636 1.00 1.75 N ATOM 113 CA MET 11 3.741 1.602 2.453 1.00 1.75 C ATOM 114 CG MET 11 1.177 2.315 2.319 1.00 1.75 C ATOM 115 SD MET 11 0.931 3.171 3.897 1.00 1.75 S ATOM 116 CE MET 11 0.199 4.718 3.344 1.00 1.75 C ATOM 117 C MET 11 4.136 2.174 3.832 1.00 1.75 C ATOM 118 O MET 11 5.050 3.004 3.935 1.00 1.75 O ATOM 119 CB MET 11 2.608 2.391 1.752 1.00 1.75 C ATOM 120 N LYS 12 3.461 1.666 4.876 1.00 1.95 N ATOM 122 CA LYS 12 3.717 2.023 6.287 1.00 1.95 C ATOM 123 CB LYS 12 2.632 1.421 7.197 1.00 1.95 C ATOM 124 CG LYS 12 2.312 2.229 8.460 1.00 1.95 C ATOM 125 CD LYS 12 1.231 1.555 9.288 1.00 1.95 C ATOM 126 CE LYS 12 0.915 2.356 10.541 1.00 1.95 C ATOM 127 NZ LYS 12 -0.144 1.706 11.363 1.00 1.95 N ATOM 131 C LYS 12 5.116 1.450 6.639 1.00 1.95 C ATOM 132 O LYS 12 5.882 2.079 7.374 1.00 1.95 O ATOM 133 N LYS 13 5.407 0.260 6.086 1.00 2.44 N ATOM 135 CA LYS 13 6.678 -0.494 6.215 1.00 2.44 C ATOM 136 CB LYS 13 6.489 -1.958 5.725 1.00 2.44 C ATOM 137 CG LYS 13 7.729 -2.692 5.155 1.00 2.44 C ATOM 138 CD LYS 13 7.654 -2.905 3.630 1.00 2.44 C ATOM 139 CE LYS 13 9.015 -3.157 2.994 1.00 2.44 C ATOM 140 NZ LYS 13 9.916 -1.968 3.029 1.00 2.44 N ATOM 144 C LYS 13 7.834 0.199 5.463 1.00 2.44 C ATOM 145 O LYS 13 8.988 0.101 5.880 1.00 2.44 O ATOM 146 N LYS 14 7.504 0.860 4.343 1.00 2.49 N ATOM 148 CA LYS 14 8.460 1.578 3.470 1.00 2.49 C ATOM 149 CB LYS 14 7.712 2.293 2.333 1.00 2.49 C ATOM 150 CG LYS 14 8.481 2.405 1.011 1.00 2.49 C ATOM 151 CD LYS 14 7.657 3.128 -0.049 1.00 2.49 C ATOM 152 CE LYS 14 8.404 3.251 -1.376 1.00 2.49 C ATOM 153 NZ LYS 14 8.598 1.945 -2.076 1.00 2.49 N ATOM 157 C LYS 14 9.222 2.578 4.356 1.00 2.49 C ATOM 158 O LYS 14 10.391 2.881 4.094 1.00 2.49 O ATOM 159 N PHE 15 8.527 3.087 5.384 1.00 1.97 N ATOM 161 CA PHE 15 9.091 4.004 6.390 1.00 1.97 C ATOM 162 CB PHE 15 7.955 4.589 7.276 1.00 1.97 C ATOM 163 CG PHE 15 8.286 5.922 7.958 1.00 1.97 C ATOM 164 CD1 PHE 15 8.864 5.949 9.250 1.00 1.97 C ATOM 165 CD2 PHE 15 7.985 7.154 7.328 1.00 1.97 C ATOM 166 CE1 PHE 15 9.140 7.181 9.906 1.00 1.97 C ATOM 167 CE2 PHE 15 8.255 8.393 7.971 1.00 1.97 C ATOM 168 CZ PHE 15 8.834 8.407 9.264 1.00 1.97 C ATOM 169 C PHE 15 10.140 3.251 7.260 1.00 1.97 C ATOM 170 O PHE 15 11.230 3.782 7.488 1.00 1.97 O ATOM 171 N LYS 16 9.799 2.031 7.722 1.00 2.41 N ATOM 173 CA LYS 16 10.666 1.142 8.554 1.00 2.41 C ATOM 174 CB LYS 16 10.461 1.393 10.064 1.00 2.41 C ATOM 175 CG LYS 16 11.131 2.648 10.610 1.00 2.41 C ATOM 176 CD LYS 16 10.872 2.809 12.104 1.00 2.41 C ATOM 177 CE LYS 16 11.534 4.062 12.674 1.00 2.41 C ATOM 178 NZ LYS 16 10.919 5.335 12.189 1.00 2.41 N ATOM 182 C LYS 16 10.369 -0.347 8.252 1.00 2.41 C ATOM 183 O LYS 16 9.214 -0.781 8.387 1.00 2.41 O ATOM 184 N ASN 17 11.391 -1.110 7.827 1.00 2.55 N ATOM 186 CA ASN 17 11.242 -2.546 7.480 1.00 2.55 C ATOM 187 CB ASN 17 11.308 -2.774 5.944 1.00 2.55 C ATOM 188 CG ASN 17 12.497 -2.073 5.276 1.00 2.55 C ATOM 189 OD1 ASN 17 12.389 -0.928 4.832 1.00 2.55 O ATOM 190 ND2 ASN 17 13.628 -2.768 5.195 1.00 2.55 N ATOM 193 C ASN 17 12.133 -3.591 8.190 1.00 2.55 C ATOM 194 O ASN 17 13.295 -3.320 8.512 1.00 2.55 O ATOM 195 N CYS 18 11.541 -4.777 8.415 1.00 3.49 N ATOM 197 CA CYS 18 12.158 -5.975 9.029 1.00 3.49 C ATOM 198 CB CYS 18 11.702 -6.151 10.484 1.00 3.49 C ATOM 199 SG CYS 18 12.545 -7.472 11.390 1.00 3.49 S ATOM 200 C CYS 18 11.594 -7.120 8.170 1.00 3.49 C ATOM 201 O CYS 18 11.179 -6.858 7.043 1.00 3.49 O ATOM 202 N GLU 19 11.582 -8.363 8.674 1.00 3.24 N ATOM 204 CA GLU 19 11.028 -9.509 7.927 1.00 3.24 C ATOM 205 CB GLU 19 12.128 -10.529 7.535 1.00 3.24 C ATOM 206 CG GLU 19 13.230 -10.798 8.592 1.00 3.24 C ATOM 207 CD GLU 19 14.387 -11.628 8.057 1.00 3.24 C ATOM 208 OE1 GLU 19 14.496 -12.813 8.438 1.00 3.24 O ATOM 209 OE2 GLU 19 15.201 -11.094 7.271 1.00 3.24 O ATOM 210 C GLU 19 9.845 -10.200 8.627 1.00 3.24 C ATOM 211 O GLU 19 9.955 -10.613 9.789 1.00 3.24 O ATOM 212 N VAL 20 8.712 -10.287 7.909 1.00 3.55 N ATOM 214 CA VAL 20 7.473 -10.938 8.382 1.00 3.55 C ATOM 215 CB VAL 20 6.327 -9.864 8.694 1.00 3.55 C ATOM 216 CG1 VAL 20 4.972 -10.514 8.955 1.00 3.55 C ATOM 217 CG2 VAL 20 6.706 -9.036 9.918 1.00 3.55 C ATOM 218 C VAL 20 7.070 -11.932 7.267 1.00 3.55 C ATOM 219 O VAL 20 6.909 -11.547 6.100 1.00 3.55 O ATOM 220 N ARG 21 6.984 -13.213 7.648 1.00 3.86 N ATOM 222 CA ARG 21 6.613 -14.348 6.781 1.00 3.86 C ATOM 223 CB ARG 21 7.853 -15.143 6.320 1.00 3.86 C ATOM 224 CG ARG 21 8.685 -14.473 5.205 1.00 3.86 C ATOM 225 CD ARG 21 10.066 -13.970 5.670 1.00 3.86 C ATOM 226 NE ARG 21 10.993 -15.057 5.990 1.00 3.86 N ATOM 228 CZ ARG 21 12.001 -14.972 6.859 1.00 3.86 C ATOM 229 NH1 ARG 21 12.779 -16.027 7.064 1.00 3.86 N ATOM 232 NH2 ARG 21 12.231 -13.853 7.535 1.00 3.86 N ATOM 235 C ARG 21 5.589 -15.256 7.479 1.00 3.86 C ATOM 236 O ARG 21 5.603 -15.353 8.707 1.00 3.86 O ATOM 237 N CYS 22 4.674 -15.859 6.706 1.00 5.61 N ATOM 239 CA CYS 22 3.636 -16.776 7.232 1.00 5.61 C ATOM 240 CB CYS 22 2.271 -16.463 6.607 1.00 5.61 C ATOM 241 SG CYS 22 0.884 -17.410 7.290 1.00 5.61 S ATOM 242 C CYS 22 4.077 -18.192 6.830 1.00 5.61 C ATOM 243 O CYS 22 3.467 -19.194 7.234 1.00 5.61 O ATOM 244 N ASP 23 5.181 -18.235 6.076 1.00 3.14 N ATOM 246 CA ASP 23 5.816 -19.456 5.574 1.00 3.14 C ATOM 247 CB ASP 23 6.055 -19.352 4.044 1.00 3.14 C ATOM 248 CG ASP 23 6.816 -18.084 3.626 1.00 3.14 C ATOM 249 OD1 ASP 23 8.067 -18.105 3.628 1.00 3.14 O ATOM 250 OD2 ASP 23 6.160 -17.078 3.281 1.00 3.14 O ATOM 251 C ASP 23 7.137 -19.706 6.332 1.00 3.14 C ATOM 252 O ASP 23 7.599 -20.852 6.420 1.00 3.14 O ATOM 253 N GLU 24 7.711 -18.623 6.883 1.00 5.20 N ATOM 255 CA GLU 24 8.991 -18.643 7.623 1.00 5.20 C ATOM 256 CB GLU 24 10.129 -18.094 6.738 1.00 5.20 C ATOM 257 CG GLU 24 10.602 -19.035 5.631 1.00 5.20 C ATOM 258 CD GLU 24 11.720 -18.441 4.796 1.00 5.20 C ATOM 259 OE1 GLU 24 12.901 -18.641 5.151 1.00 5.20 O ATOM 260 OE2 GLU 24 11.420 -17.776 3.782 1.00 5.20 O ATOM 261 C GLU 24 9.039 -17.907 8.979 1.00 5.20 C ATOM 262 O GLU 24 9.647 -18.421 9.925 1.00 5.20 O ATOM 263 N SER 25 8.400 -16.729 9.071 1.00 4.95 N ATOM 265 CA SER 25 8.422 -15.886 10.285 1.00 4.95 C ATOM 266 CB SER 25 8.883 -14.460 9.918 1.00 4.95 C ATOM 267 OG SER 25 10.189 -14.469 9.368 1.00 4.95 O ATOM 269 C SER 25 7.201 -15.855 11.244 1.00 4.95 C ATOM 270 O SER 25 6.952 -16.849 11.938 1.00 4.95 O ATOM 271 N ASN 26 6.454 -14.736 11.272 1.00 4.85 N ATOM 273 CA ASN 26 5.301 -14.517 12.174 1.00 4.85 C ATOM 274 CB ASN 26 5.523 -13.211 12.985 1.00 4.85 C ATOM 275 CG ASN 26 5.753 -11.977 12.112 1.00 4.85 C ATOM 276 OD1 ASN 26 6.847 -11.765 11.580 1.00 4.85 O ATOM 277 ND2 ASN 26 4.726 -11.144 11.992 1.00 4.85 N ATOM 280 C ASN 26 3.857 -14.606 11.603 1.00 4.85 C ATOM 281 O ASN 26 3.638 -15.267 10.580 1.00 4.85 O ATOM 282 N HIS 27 2.897 -13.946 12.285 1.00 5.45 N ATOM 284 CA HIS 27 1.449 -13.890 11.953 1.00 5.45 C ATOM 285 CG HIS 27 -0.739 -13.570 13.253 1.00 5.45 C ATOM 286 CD2 HIS 27 -1.894 -12.891 13.049 1.00 5.45 C ATOM 287 ND1 HIS 27 -1.108 -14.821 13.701 1.00 5.45 N ATOM 289 CE1 HIS 27 -2.426 -14.896 13.766 1.00 5.45 C ATOM 290 NE2 HIS 27 -2.926 -13.737 13.376 1.00 5.45 N ATOM 292 C HIS 27 1.159 -13.254 10.568 1.00 5.45 C ATOM 293 O HIS 27 1.677 -13.763 9.572 1.00 5.45 O ATOM 294 CB HIS 27 0.697 -13.154 13.085 1.00 5.45 C ATOM 295 N CYS 28 0.312 -12.202 10.491 1.00 3.63 N ATOM 297 CA CYS 28 -0.027 -11.495 9.225 1.00 3.63 C ATOM 298 CB CYS 28 1.166 -10.697 8.663 1.00 3.63 C ATOM 299 SG CYS 28 1.814 -9.449 9.800 1.00 3.63 S ATOM 300 C CYS 28 -0.706 -12.350 8.132 1.00 3.63 C ATOM 301 O CYS 28 -0.579 -13.581 8.156 1.00 3.63 O ATOM 302 N VAL 29 -1.451 -11.713 7.215 1.00 3.31 N ATOM 304 CA VAL 29 -2.158 -12.425 6.130 1.00 3.31 C ATOM 305 CB VAL 29 -3.633 -11.851 5.932 1.00 3.31 C ATOM 306 CG1 VAL 29 -3.642 -10.364 5.517 1.00 3.31 C ATOM 307 CG2 VAL 29 -4.458 -12.728 4.978 1.00 3.31 C ATOM 308 C VAL 29 -1.263 -12.332 4.860 1.00 3.31 C ATOM 309 O VAL 29 -0.823 -11.245 4.459 1.00 3.31 O ATOM 310 N GLU 30 -0.986 -13.515 4.292 1.00 2.82 N ATOM 312 CA GLU 30 -0.087 -13.713 3.145 1.00 2.82 C ATOM 313 CB GLU 30 1.047 -14.680 3.576 1.00 2.82 C ATOM 314 CG GLU 30 2.228 -14.894 2.606 1.00 2.82 C ATOM 315 CD GLU 30 3.265 -15.859 3.146 1.00 2.82 C ATOM 316 OE1 GLU 30 3.137 -17.075 2.896 1.00 2.82 O ATOM 317 OE2 GLU 30 4.208 -15.397 3.821 1.00 2.82 O ATOM 318 C GLU 30 -0.649 -14.158 1.782 1.00 2.82 C ATOM 319 O GLU 30 -1.607 -14.935 1.694 1.00 2.82 O ATOM 320 N VAL 31 -0.002 -13.609 0.742 1.00 2.45 N ATOM 322 CA VAL 31 -0.195 -13.889 -0.695 1.00 2.45 C ATOM 323 CB VAL 31 -0.547 -12.602 -1.532 1.00 2.45 C ATOM 324 CG1 VAL 31 -0.821 -12.958 -3.005 1.00 2.45 C ATOM 325 CG2 VAL 31 -1.770 -11.913 -0.956 1.00 2.45 C ATOM 326 C VAL 31 1.274 -14.318 -0.935 1.00 2.45 C ATOM 327 O VAL 31 2.183 -13.704 -0.351 1.00 2.45 O ATOM 328 N ARG 32 1.525 -15.322 -1.783 1.00 2.69 N ATOM 330 CA ARG 32 2.908 -15.792 -1.964 1.00 2.69 C ATOM 331 CB ARG 32 3.004 -17.309 -1.724 1.00 2.69 C ATOM 332 CG ARG 32 2.783 -17.745 -0.272 1.00 2.69 C ATOM 333 CD ARG 32 2.891 -19.259 -0.100 1.00 2.69 C ATOM 334 NE ARG 32 4.259 -19.757 -0.274 1.00 2.69 N ATOM 336 CZ ARG 32 4.630 -21.034 -0.176 1.00 2.69 C ATOM 337 NH1 ARG 32 5.904 -21.360 -0.355 1.00 2.69 N ATOM 340 NH2 ARG 32 3.747 -21.990 0.098 1.00 2.69 N ATOM 343 C ARG 32 3.648 -15.418 -3.250 1.00 2.69 C ATOM 344 O ARG 32 3.180 -15.661 -4.372 1.00 2.69 O ATOM 345 N CYS 33 4.810 -14.791 -3.027 1.00 4.41 N ATOM 347 CA CYS 33 5.769 -14.325 -4.040 1.00 4.41 C ATOM 348 CB CYS 33 5.810 -12.787 -4.061 1.00 4.41 C ATOM 349 SG CYS 33 6.847 -12.075 -5.364 1.00 4.41 S ATOM 350 C CYS 33 7.123 -14.882 -3.566 1.00 4.41 C ATOM 351 O CYS 33 8.107 -14.879 -4.316 1.00 4.41 O ATOM 352 N SER 34 7.121 -15.391 -2.317 1.00 4.38 N ATOM 354 CA SER 34 8.259 -15.981 -1.560 1.00 4.38 C ATOM 355 CB SER 34 8.916 -17.171 -2.300 1.00 4.38 C ATOM 356 OG SER 34 9.865 -17.841 -1.485 1.00 4.38 O ATOM 358 C SER 34 9.296 -14.933 -1.100 1.00 4.38 C ATOM 359 O SER 34 10.160 -14.510 -1.884 1.00 4.38 O ATOM 360 N ASP 35 9.161 -14.513 0.171 1.00 6.27 N ATOM 362 CA ASP 35 9.995 -13.506 0.884 1.00 6.27 C ATOM 363 CB ASP 35 10.981 -14.178 1.881 1.00 6.27 C ATOM 364 CG ASP 35 11.874 -15.244 1.233 1.00 6.27 C ATOM 365 OD1 ASP 35 12.977 -14.894 0.759 1.00 6.27 O ATOM 366 OD2 ASP 35 11.474 -16.429 1.211 1.00 6.27 O ATOM 367 C ASP 35 10.658 -12.367 0.058 1.00 6.27 C ATOM 368 O ASP 35 11.878 -12.363 -0.166 1.00 6.27 O ATOM 369 N THR 36 9.810 -11.441 -0.416 1.00 5.69 N ATOM 371 CA THR 36 10.211 -10.277 -1.230 1.00 5.69 C ATOM 372 CB THR 36 9.307 -10.125 -2.494 1.00 5.69 C ATOM 373 OG1 THR 36 7.927 -10.201 -2.114 1.00 5.69 O ATOM 375 CG2 THR 36 9.617 -11.214 -3.515 1.00 5.69 C ATOM 376 C THR 36 10.184 -8.964 -0.427 1.00 5.69 C ATOM 377 O THR 36 9.264 -8.744 0.372 1.00 5.69 O ATOM 378 N LYS 37 11.225 -8.131 -0.614 1.00 6.73 N ATOM 380 CA LYS 37 11.436 -6.801 0.028 1.00 6.73 C ATOM 381 CB LYS 37 10.599 -5.705 -0.670 1.00 6.73 C ATOM 382 CG LYS 37 11.038 -5.375 -2.092 1.00 6.73 C ATOM 383 CD LYS 37 10.162 -4.288 -2.704 1.00 6.73 C ATOM 384 CE LYS 37 10.585 -3.942 -4.131 1.00 6.73 C ATOM 385 NZ LYS 37 11.907 -3.253 -4.212 1.00 6.73 N ATOM 389 C LYS 37 11.304 -6.677 1.566 1.00 6.73 C ATOM 390 O LYS 37 11.656 -5.634 2.138 1.00 6.73 O ATOM 391 N TYR 38 10.871 -7.769 2.223 1.00 5.19 N ATOM 393 CA TYR 38 10.651 -7.912 3.687 1.00 5.19 C ATOM 394 CB TYR 38 11.942 -8.396 4.418 1.00 5.19 C ATOM 395 CG TYR 38 13.238 -7.594 4.217 1.00 5.19 C ATOM 396 CD1 TYR 38 13.554 -6.489 5.046 1.00 5.19 C ATOM 397 CE1 TYR 38 14.769 -5.766 4.883 1.00 5.19 C ATOM 398 CD2 TYR 38 14.174 -7.958 3.217 1.00 5.19 C ATOM 399 CE2 TYR 38 15.391 -7.240 3.048 1.00 5.19 C ATOM 400 CZ TYR 38 15.677 -6.150 3.884 1.00 5.19 C ATOM 401 OH TYR 38 16.853 -5.451 3.726 1.00 5.19 O ATOM 403 C TYR 38 9.938 -6.777 4.470 1.00 5.19 C ATOM 404 O TYR 38 10.363 -5.618 4.417 1.00 5.19 O ATOM 405 N THR 39 8.894 -7.156 5.223 1.00 4.94 N ATOM 407 CA THR 39 8.037 -6.260 6.034 1.00 4.94 C ATOM 408 CB THR 39 6.534 -6.341 5.566 1.00 4.94 C ATOM 409 OG1 THR 39 6.452 -5.848 4.230 1.00 4.94 O ATOM 411 CG2 THR 39 5.584 -5.480 6.423 1.00 4.94 C ATOM 412 C THR 39 8.170 -6.395 7.565 1.00 4.94 C ATOM 413 O THR 39 8.503 -7.468 8.066 1.00 4.94 O ATOM 414 N LEU 40 7.953 -5.274 8.271 1.00 5.91 N ATOM 416 CA LEU 40 8.013 -5.164 9.740 1.00 5.91 C ATOM 417 CB LEU 40 8.831 -3.899 10.126 1.00 5.91 C ATOM 418 CG LEU 40 9.165 -3.166 11.468 1.00 5.91 C ATOM 419 CD1 LEU 40 8.028 -2.224 11.886 1.00 5.91 C ATOM 420 CD2 LEU 40 9.567 -4.094 12.627 1.00 5.91 C ATOM 421 C LEU 40 6.579 -5.062 10.296 1.00 5.91 C ATOM 422 O LEU 40 6.319 -5.508 11.419 1.00 5.91 O ATOM 423 N CYS 41 5.668 -4.490 9.488 1.00 8.63 N ATOM 425 CA CYS 41 4.223 -4.275 9.782 1.00 8.63 C ATOM 426 CB CYS 41 3.410 -5.574 9.601 1.00 8.63 C ATOM 427 SG CYS 41 3.842 -6.926 10.726 1.00 8.63 S ATOM 428 C CYS 41 3.841 -3.582 11.100 1.00 8.63 C ATOM 429 O CYS 41 2.995 -2.665 11.044 1.00 8.63 O ATOM 430 OXT CYS 41 4.380 -3.956 12.164 1.00 8.63 O TER END