####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS152_2 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS152_2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 2 - 23 4.93 12.33 LONGEST_CONTINUOUS_SEGMENT: 22 3 - 24 4.92 12.45 LONGEST_CONTINUOUS_SEGMENT: 22 4 - 25 4.98 12.63 LCS_AVERAGE: 48.60 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 1 - 12 1.98 16.17 LONGEST_CONTINUOUS_SEGMENT: 12 2 - 13 1.99 16.10 LONGEST_CONTINUOUS_SEGMENT: 12 3 - 14 1.88 16.11 LONGEST_CONTINUOUS_SEGMENT: 12 4 - 15 1.88 16.24 LCS_AVERAGE: 20.94 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 6 - 14 0.79 17.52 LCS_AVERAGE: 14.75 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 7 12 17 3 3 7 9 11 11 12 13 14 14 15 15 15 18 18 24 25 29 29 30 LCS_GDT Q 2 Q 2 7 12 22 3 6 7 9 11 12 12 13 14 16 18 21 23 25 28 28 28 29 29 30 LCS_GDT E 3 E 3 7 12 22 5 6 7 9 11 12 13 13 14 16 17 17 22 25 28 28 28 29 29 30 LCS_GDT T 4 T 4 7 12 22 5 6 8 10 11 12 13 13 15 17 20 22 23 25 28 28 28 29 29 30 LCS_GDT R 5 R 5 7 12 22 5 6 8 10 11 12 13 13 14 17 20 22 23 25 28 28 28 29 29 30 LCS_GDT K 6 K 6 9 12 22 5 8 9 10 11 12 13 13 14 17 20 22 23 25 28 28 28 29 29 30 LCS_GDT K 7 K 7 9 12 22 5 8 9 10 11 12 13 13 15 17 20 22 23 25 28 28 28 29 29 30 LCS_GDT C 8 C 8 9 12 22 5 8 9 10 11 12 13 13 14 16 20 21 22 25 28 28 28 29 29 30 LCS_GDT T 9 T 9 9 12 22 5 8 9 10 11 12 13 13 14 16 20 22 23 25 28 28 28 29 29 30 LCS_GDT E 10 E 10 9 12 22 5 8 9 10 11 12 13 13 15 17 20 22 23 25 28 28 28 29 29 30 LCS_GDT M 11 M 11 9 12 22 5 8 9 10 11 12 13 13 15 17 20 22 23 25 28 28 28 29 29 30 LCS_GDT K 12 K 12 9 12 22 4 8 9 10 11 12 13 13 14 16 20 22 23 25 28 28 28 29 29 30 LCS_GDT K 13 K 13 9 12 22 4 8 9 10 11 12 13 13 14 17 20 22 23 25 28 28 28 29 29 30 LCS_GDT K 14 K 14 9 12 22 4 8 9 9 11 12 13 13 15 17 20 22 23 25 28 28 28 29 29 30 LCS_GDT F 15 F 15 5 12 22 3 4 5 8 10 12 13 13 15 17 20 22 23 25 28 28 28 29 29 30 LCS_GDT K 16 K 16 4 8 22 3 4 4 4 7 8 10 11 14 17 20 22 23 25 28 28 28 29 29 30 LCS_GDT N 17 N 17 4 7 22 3 4 5 5 7 7 8 10 15 17 20 22 23 25 28 28 28 29 29 30 LCS_GDT C 18 C 18 4 7 22 1 4 5 5 7 7 9 10 15 17 20 22 23 25 28 28 28 29 29 30 LCS_GDT E 19 E 19 5 7 22 3 4 5 5 7 7 9 10 15 17 20 22 23 25 28 28 28 29 29 30 LCS_GDT V 20 V 20 5 7 22 3 4 5 5 7 7 9 10 15 17 20 22 23 25 28 28 28 29 29 30 LCS_GDT R 21 R 21 5 7 22 3 4 5 5 7 7 9 10 15 17 20 22 23 25 28 28 28 29 29 30 LCS_GDT C 22 C 22 5 7 22 3 4 5 5 7 7 8 10 15 17 19 22 23 25 28 28 28 29 29 30 LCS_GDT D 23 D 23 5 7 22 3 4 5 5 7 7 8 10 15 17 19 22 23 25 28 28 28 29 29 30 LCS_GDT E 24 E 24 3 6 22 3 3 3 5 6 6 8 9 13 16 19 22 23 25 28 28 28 29 29 30 LCS_GDT S 25 S 25 3 7 22 3 3 4 6 6 7 8 9 12 13 16 20 22 25 28 28 28 29 29 30 LCS_GDT N 26 N 26 5 7 17 3 4 5 6 7 7 9 11 12 15 16 20 21 23 28 28 28 29 29 30 LCS_GDT H 27 H 27 5 7 17 3 4 5 6 7 7 9 11 12 15 16 20 21 23 28 28 28 29 29 30 LCS_GDT C 28 C 28 5 7 17 3 4 5 6 7 7 9 11 15 17 20 22 23 25 28 28 28 29 29 30 LCS_GDT V 29 V 29 5 7 17 3 4 5 6 7 7 9 11 15 17 20 22 23 25 28 28 28 29 29 30 LCS_GDT E 30 E 30 5 7 17 3 4 5 6 7 7 8 11 12 15 16 20 21 22 23 25 27 28 29 30 LCS_GDT V 31 V 31 4 7 17 3 4 5 6 7 7 9 11 12 15 16 20 21 22 23 25 27 28 29 30 LCS_GDT R 32 R 32 4 7 17 3 4 5 6 7 8 9 11 12 15 16 20 21 22 23 25 27 28 29 30 LCS_GDT C 33 C 33 5 6 17 3 4 5 6 6 8 9 11 12 15 16 20 21 22 23 25 27 28 29 30 LCS_GDT S 34 S 34 5 6 17 3 4 5 6 6 6 7 9 9 11 12 14 15 19 21 23 25 27 29 30 LCS_GDT D 35 D 35 5 5 17 3 4 5 6 6 7 9 11 12 15 16 20 21 22 23 25 27 28 29 30 LCS_GDT T 36 T 36 6 6 17 6 6 6 6 7 8 9 11 12 15 16 20 21 22 23 25 27 28 29 30 LCS_GDT K 37 K 37 6 6 17 6 6 6 6 6 7 9 11 12 15 16 20 21 22 23 25 27 28 29 30 LCS_GDT Y 38 Y 38 6 6 17 6 6 6 6 7 8 9 10 12 15 16 20 21 22 23 25 27 28 29 30 LCS_GDT T 39 T 39 6 6 17 6 6 6 6 7 8 9 10 12 16 17 20 21 22 23 25 27 28 29 30 LCS_GDT L 40 L 40 6 6 17 6 6 6 6 6 8 9 10 14 16 17 20 21 22 23 25 27 28 29 30 LCS_GDT C 41 C 41 6 6 17 6 6 6 6 7 8 9 10 12 15 17 20 21 22 23 25 27 28 29 30 LCS_AVERAGE LCS_A: 28.10 ( 14.75 20.94 48.60 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 8 9 10 11 12 13 13 15 17 20 22 23 25 28 28 28 29 29 30 GDT PERCENT_AT 14.63 19.51 21.95 24.39 26.83 29.27 31.71 31.71 36.59 41.46 48.78 53.66 56.10 60.98 68.29 68.29 68.29 70.73 70.73 73.17 GDT RMS_LOCAL 0.39 0.62 0.79 1.39 1.52 1.99 2.19 2.20 3.70 3.97 4.25 4.53 4.67 5.00 5.40 5.40 5.40 5.57 5.57 5.91 GDT RMS_ALL_AT 19.51 17.60 17.52 16.55 16.37 16.10 15.97 16.16 12.30 12.40 12.21 12.51 12.62 12.86 13.03 13.03 13.03 13.16 13.16 13.06 # Checking swapping # possible swapping detected: E 3 E 3 # possible swapping detected: F 15 F 15 # possible swapping detected: E 30 E 30 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 7.548 0 0.202 0.278 11.724 1.364 0.909 11.724 LGA Q 2 Q 2 6.233 0 0.243 1.168 12.850 5.909 2.626 12.850 LGA E 3 E 3 4.091 0 0.085 1.389 11.226 18.182 8.081 11.189 LGA T 4 T 4 1.805 0 0.055 1.189 5.255 52.273 34.026 5.255 LGA R 5 R 5 1.830 0 0.080 1.174 6.662 58.636 33.058 6.662 LGA K 6 K 6 0.878 0 0.087 0.681 4.386 74.545 45.051 4.281 LGA K 7 K 7 2.185 0 0.036 0.599 2.850 38.636 37.576 1.812 LGA C 8 C 8 2.162 0 0.046 0.870 2.991 44.545 40.606 2.991 LGA T 9 T 9 0.870 0 0.040 0.272 1.289 77.727 82.078 0.425 LGA E 10 E 10 1.615 0 0.067 0.431 3.416 54.545 43.434 2.233 LGA M 11 M 11 1.851 0 0.113 1.367 9.181 62.273 35.227 9.181 LGA K 12 K 12 0.673 0 0.017 0.746 4.235 82.273 54.747 4.235 LGA K 13 K 13 1.492 0 0.059 0.614 2.902 53.182 52.525 2.598 LGA K 14 K 14 2.399 0 0.047 0.293 7.191 36.364 21.212 7.191 LGA F 15 F 15 3.701 0 0.426 0.651 8.326 12.273 5.620 7.315 LGA K 16 K 16 9.058 0 0.397 1.108 12.416 0.000 0.000 5.571 LGA N 17 N 17 13.536 0 0.608 0.998 17.283 0.000 0.000 16.781 LGA C 18 C 18 17.009 0 0.640 0.595 18.339 0.000 0.000 16.457 LGA E 19 E 19 19.235 0 0.265 0.871 27.446 0.000 0.000 27.446 LGA V 20 V 20 15.925 0 0.044 1.009 19.017 0.000 0.000 11.138 LGA R 21 R 21 20.146 0 0.087 1.527 30.628 0.000 0.000 30.628 LGA C 22 C 22 18.275 0 0.498 0.838 21.502 0.000 0.000 20.643 LGA D 23 D 23 20.404 0 0.091 1.066 26.055 0.000 0.000 26.055 LGA E 24 E 24 19.336 0 0.329 1.216 21.923 0.000 0.000 21.174 LGA S 25 S 25 24.099 0 0.565 0.553 27.257 0.000 0.000 27.257 LGA N 26 N 26 23.290 0 0.623 0.985 24.478 0.000 0.000 21.733 LGA H 27 H 27 18.422 0 0.485 1.108 21.135 0.000 0.000 21.135 LGA C 28 C 28 16.982 0 0.108 0.800 19.010 0.000 0.000 18.650 LGA V 29 V 29 14.465 0 0.187 0.308 15.605 0.000 0.000 12.444 LGA E 30 E 30 18.862 0 0.205 1.102 27.393 0.000 0.000 26.993 LGA V 31 V 31 19.937 0 0.127 0.133 21.531 0.000 0.000 19.974 LGA R 32 R 32 24.893 0 0.136 1.264 32.839 0.000 0.000 31.305 LGA C 33 C 33 25.363 0 0.369 0.385 27.306 0.000 0.000 22.407 LGA S 34 S 34 30.175 0 0.274 0.700 33.404 0.000 0.000 33.404 LGA D 35 D 35 31.772 0 0.036 0.880 35.485 0.000 0.000 35.013 LGA T 36 T 36 25.683 0 0.486 0.532 28.375 0.000 0.000 28.375 LGA K 37 K 37 18.952 0 0.168 0.979 21.395 0.000 0.000 17.181 LGA Y 38 Y 38 15.894 0 0.110 1.396 22.144 0.000 0.000 22.144 LGA T 39 T 39 11.326 0 0.118 0.973 12.973 0.000 0.000 12.973 LGA L 40 L 40 10.577 0 0.110 1.209 12.399 0.000 0.000 12.399 LGA C 41 C 41 13.352 0 0.246 0.848 17.148 0.000 0.000 17.148 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 9.462 9.378 10.244 16.408 12.117 6.208 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 13 2.19 35.976 32.407 0.567 LGA_LOCAL RMSD: 2.192 Number of atoms: 13 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 15.967 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 9.462 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.015712 * X + -0.931715 * Y + 0.362849 * Z + 6.574930 Y_new = -0.930402 * X + 0.119287 * Y + 0.346588 * Z + -7.290528 Z_new = -0.366205 * X + -0.343041 * Y + -0.864995 * Z + 1.158711 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.553911 0.374927 -2.764037 [DEG: -89.0325 21.4817 -158.3676 ] ZXZ: 2.333277 2.615937 -2.323547 [DEG: 133.6870 149.8822 -133.1294 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS152_2 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS152_2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 13 2.19 32.407 9.46 REMARK ---------------------------------------------------------- MOLECULE T0955TS152_2 PFRMAT TS TARGET T0955 MODEL 2 PARENT N/A ATOM 1 CB SER 1 7.175 -10.355 -1.543 1.00 1.70 C ATOM 2 OG SER 1 8.054 -10.231 -2.649 1.00 1.70 O ATOM 4 C SER 1 5.323 -11.614 -0.484 1.00 1.70 C ATOM 5 O SER 1 4.099 -11.720 -0.611 1.00 1.70 O ATOM 8 N SER 1 5.492 -11.498 -2.974 1.00 1.70 N ATOM 10 CA SER 1 6.252 -11.580 -1.698 1.00 1.70 C ATOM 11 N GLN 2 5.965 -11.546 0.688 1.00 1.31 N ATOM 13 CA GLN 2 5.399 -11.468 2.047 1.00 1.31 C ATOM 14 CB GLN 2 6.560 -11.433 3.036 1.00 1.31 C ATOM 15 CG GLN 2 7.556 -12.590 2.893 1.00 1.31 C ATOM 16 CD GLN 2 8.946 -12.239 3.390 1.00 1.31 C ATOM 17 OE1 GLN 2 9.697 -11.527 2.720 1.00 1.31 O ATOM 18 NE2 GLN 2 9.305 -12.753 4.559 1.00 1.31 N ATOM 21 C GLN 2 4.783 -10.070 2.036 1.00 1.31 C ATOM 22 O GLN 2 3.717 -9.802 2.610 1.00 1.31 O ATOM 23 N GLU 3 5.501 -9.225 1.287 1.00 0.98 N ATOM 25 CA GLU 3 5.255 -7.812 1.050 1.00 0.98 C ATOM 26 CB GLU 3 6.440 -7.151 0.312 1.00 0.98 C ATOM 27 CG GLU 3 7.847 -7.443 0.912 1.00 0.98 C ATOM 28 CD GLU 3 8.208 -6.619 2.158 1.00 0.98 C ATOM 29 OE1 GLU 3 8.368 -7.225 3.238 1.00 0.98 O ATOM 30 OE2 GLU 3 8.340 -5.380 2.054 1.00 0.98 O ATOM 31 C GLU 3 3.873 -7.447 0.481 1.00 0.98 C ATOM 32 O GLU 3 3.484 -6.298 0.605 1.00 0.98 O ATOM 33 N THR 4 3.196 -8.363 -0.232 1.00 1.46 N ATOM 35 CA THR 4 1.839 -8.101 -0.789 1.00 1.46 C ATOM 36 CB THR 4 1.439 -9.160 -1.843 1.00 1.46 C ATOM 37 OG1 THR 4 1.654 -10.474 -1.314 1.00 1.46 O ATOM 39 CG2 THR 4 2.245 -8.978 -3.117 1.00 1.46 C ATOM 40 C THR 4 0.673 -7.927 0.235 1.00 1.46 C ATOM 41 O THR 4 -0.058 -6.930 0.152 1.00 1.46 O ATOM 42 N ARG 5 0.519 -8.851 1.202 1.00 1.62 N ATOM 44 CA ARG 5 -0.524 -8.750 2.261 1.00 1.62 C ATOM 45 CB ARG 5 -0.607 -10.036 3.101 1.00 1.62 C ATOM 46 CG ARG 5 -1.925 -10.214 3.882 1.00 1.62 C ATOM 47 CD ARG 5 -1.778 -11.197 5.034 1.00 1.62 C ATOM 48 NE ARG 5 -3.029 -11.367 5.776 1.00 1.62 N ATOM 50 CZ ARG 5 -3.194 -12.165 6.832 1.00 1.62 C ATOM 51 NH1 ARG 5 -4.380 -12.234 7.421 1.00 1.62 N ATOM 54 NH2 ARG 5 -2.188 -12.895 7.307 1.00 1.62 N ATOM 57 C ARG 5 -0.004 -7.590 3.118 1.00 1.62 C ATOM 58 O ARG 5 -0.752 -6.706 3.565 1.00 1.62 O ATOM 59 N LYS 6 1.323 -7.599 3.253 1.00 1.38 N ATOM 61 CA LYS 6 2.082 -6.588 3.961 1.00 1.38 C ATOM 62 CB LYS 6 3.564 -6.966 4.093 1.00 1.38 C ATOM 63 CG LYS 6 4.330 -6.250 5.214 1.00 1.38 C ATOM 64 CD LYS 6 5.826 -6.428 5.054 1.00 1.38 C ATOM 65 CE LYS 6 6.587 -5.589 6.063 1.00 1.38 C ATOM 66 NZ LYS 6 8.051 -5.621 5.805 1.00 1.38 N ATOM 70 C LYS 6 1.882 -5.254 3.214 1.00 1.38 C ATOM 71 O LYS 6 1.928 -4.240 3.862 1.00 1.38 O ATOM 72 N LYS 7 1.572 -5.269 1.899 1.00 1.35 N ATOM 74 CA LYS 7 1.416 -4.039 1.058 1.00 1.35 C ATOM 75 CB LYS 7 0.932 -4.355 -0.362 1.00 1.35 C ATOM 76 CG LYS 7 2.020 -4.289 -1.423 1.00 1.35 C ATOM 77 CD LYS 7 1.464 -4.609 -2.806 1.00 1.35 C ATOM 78 CE LYS 7 2.540 -4.559 -3.888 1.00 1.35 C ATOM 79 NZ LYS 7 3.547 -5.658 -3.779 1.00 1.35 N ATOM 83 C LYS 7 0.531 -2.974 1.694 1.00 1.35 C ATOM 84 O LYS 7 0.747 -1.774 1.471 1.00 1.35 O ATOM 85 N CYS 8 -0.468 -3.414 2.464 1.00 1.57 N ATOM 87 CA CYS 8 -1.331 -2.490 3.217 1.00 1.57 C ATOM 88 CB CYS 8 -2.511 -3.252 3.828 1.00 1.57 C ATOM 89 SG CYS 8 -3.572 -4.081 2.621 1.00 1.57 S ATOM 90 C CYS 8 -0.439 -1.879 4.333 1.00 1.57 C ATOM 91 O CYS 8 -0.323 -0.648 4.446 1.00 1.57 O ATOM 92 N THR 9 0.275 -2.763 5.049 1.00 1.50 N ATOM 94 CA THR 9 1.215 -2.423 6.144 1.00 1.50 C ATOM 95 CB THR 9 1.625 -3.705 6.957 1.00 1.50 C ATOM 96 OG1 THR 9 0.585 -4.686 6.860 1.00 1.50 O ATOM 98 CG2 THR 9 1.836 -3.375 8.441 1.00 1.50 C ATOM 99 C THR 9 2.481 -1.744 5.556 1.00 1.50 C ATOM 100 O THR 9 3.041 -0.830 6.162 1.00 1.50 O ATOM 101 N GLU 10 2.894 -2.209 4.368 1.00 1.34 N ATOM 103 CA GLU 10 4.071 -1.745 3.612 1.00 1.34 C ATOM 104 CB GLU 10 4.439 -2.740 2.491 1.00 1.34 C ATOM 105 CG GLU 10 5.911 -2.747 2.051 1.00 1.34 C ATOM 106 CD GLU 10 6.067 -2.883 0.547 1.00 1.34 C ATOM 107 OE1 GLU 10 5.872 -3.998 0.016 1.00 1.34 O ATOM 108 OE2 GLU 10 6.391 -1.871 -0.107 1.00 1.34 O ATOM 109 C GLU 10 3.908 -0.317 3.068 1.00 1.34 C ATOM 110 O GLU 10 4.897 0.387 2.974 1.00 1.34 O ATOM 111 N MET 11 2.683 0.073 2.678 1.00 1.31 N ATOM 113 CA MET 11 2.374 1.421 2.147 1.00 1.31 C ATOM 114 CG MET 11 0.631 2.394 0.486 1.00 1.31 C ATOM 115 SD MET 11 -1.107 2.416 -0.004 1.00 1.31 S ATOM 116 CE MET 11 -1.656 3.968 0.721 1.00 1.31 C ATOM 117 C MET 11 2.661 2.460 3.255 1.00 1.31 C ATOM 118 O MET 11 3.350 3.463 3.003 1.00 1.31 O ATOM 119 CB MET 11 0.907 1.478 1.688 1.00 1.31 C ATOM 120 N LYS 12 2.183 2.173 4.478 1.00 1.46 N ATOM 122 CA LYS 12 2.428 3.043 5.645 1.00 1.46 C ATOM 123 CB LYS 12 1.480 2.757 6.835 1.00 1.46 C ATOM 124 CG LYS 12 1.281 1.315 7.310 1.00 1.46 C ATOM 125 CD LYS 12 0.297 1.277 8.476 1.00 1.46 C ATOM 126 CE LYS 12 0.162 -0.114 9.086 1.00 1.46 C ATOM 127 NZ LYS 12 1.380 -0.550 9.832 1.00 1.46 N ATOM 131 C LYS 12 3.927 2.978 6.016 1.00 1.46 C ATOM 132 O LYS 12 4.507 3.972 6.458 1.00 1.46 O ATOM 133 N LYS 13 4.508 1.781 5.846 1.00 1.81 N ATOM 135 CA LYS 13 5.940 1.465 6.051 1.00 1.81 C ATOM 136 CB LYS 13 6.178 -0.050 6.146 1.00 1.81 C ATOM 137 CG LYS 13 5.854 -0.640 7.512 1.00 1.81 C ATOM 138 CD LYS 13 5.896 -2.157 7.484 1.00 1.81 C ATOM 139 CE LYS 13 5.490 -2.743 8.825 1.00 1.81 C ATOM 140 NZ LYS 13 5.401 -4.226 8.773 1.00 1.81 N ATOM 144 C LYS 13 6.857 2.078 4.974 1.00 1.81 C ATOM 145 O LYS 13 7.961 2.500 5.294 1.00 1.81 O ATOM 146 N LYS 14 6.322 2.228 3.747 1.00 1.80 N ATOM 148 CA LYS 14 7.011 2.724 2.522 1.00 1.80 C ATOM 149 CB LYS 14 6.027 2.853 1.348 1.00 1.80 C ATOM 150 CG LYS 14 6.031 1.679 0.380 1.00 1.80 C ATOM 151 CD LYS 14 5.065 1.920 -0.776 1.00 1.80 C ATOM 152 CE LYS 14 5.016 0.742 -1.745 1.00 1.80 C ATOM 153 NZ LYS 14 4.350 -0.467 -1.175 1.00 1.80 N ATOM 157 C LYS 14 7.759 4.036 2.706 1.00 1.80 C ATOM 158 O LYS 14 8.743 4.287 1.996 1.00 1.80 O ATOM 159 N PHE 15 7.267 4.879 3.622 1.00 1.63 N ATOM 161 CA PHE 15 7.914 6.160 3.965 1.00 1.63 C ATOM 162 CB PHE 15 7.142 6.879 5.098 1.00 1.63 C ATOM 163 CG PHE 15 5.769 7.416 4.695 1.00 1.63 C ATOM 164 CD1 PHE 15 5.624 8.742 4.217 1.00 1.63 C ATOM 165 CD2 PHE 15 4.609 6.618 4.826 1.00 1.63 C ATOM 166 CE1 PHE 15 4.346 9.265 3.875 1.00 1.63 C ATOM 167 CE2 PHE 15 3.324 7.127 4.488 1.00 1.63 C ATOM 168 CZ PHE 15 3.193 8.453 4.012 1.00 1.63 C ATOM 169 C PHE 15 9.361 5.844 4.415 1.00 1.63 C ATOM 170 O PHE 15 10.279 6.622 4.144 1.00 1.63 O ATOM 171 N LYS 16 9.526 4.692 5.089 1.00 2.07 N ATOM 173 CA LYS 16 10.811 4.133 5.585 1.00 2.07 C ATOM 174 CB LYS 16 11.200 4.713 6.976 1.00 2.07 C ATOM 175 CG LYS 16 10.089 4.794 8.043 1.00 2.07 C ATOM 176 CD LYS 16 10.616 5.379 9.349 1.00 2.07 C ATOM 177 CE LYS 16 9.531 5.468 10.421 1.00 2.07 C ATOM 178 NZ LYS 16 8.473 6.479 10.118 1.00 2.07 N ATOM 182 C LYS 16 10.709 2.577 5.606 1.00 2.07 C ATOM 183 O LYS 16 10.852 1.946 6.665 1.00 2.07 O ATOM 184 N ASN 17 10.454 1.983 4.425 1.00 2.28 N ATOM 186 CA ASN 17 10.267 0.520 4.218 1.00 2.28 C ATOM 187 CB ASN 17 9.966 0.194 2.730 1.00 2.28 C ATOM 188 CG ASN 17 10.966 0.828 1.756 1.00 2.28 C ATOM 189 OD1 ASN 17 11.983 0.223 1.410 1.00 2.28 O ATOM 190 ND2 ASN 17 10.668 2.043 1.306 1.00 2.28 N ATOM 193 C ASN 17 11.285 -0.493 4.789 1.00 2.28 C ATOM 194 O ASN 17 12.451 -0.153 5.019 1.00 2.28 O ATOM 195 N CYS 18 10.802 -1.727 5.003 1.00 3.04 N ATOM 197 CA CYS 18 11.568 -2.867 5.534 1.00 3.04 C ATOM 198 CB CYS 18 10.631 -3.776 6.345 1.00 3.04 C ATOM 199 SG CYS 18 9.840 -2.968 7.754 1.00 3.04 S ATOM 200 C CYS 18 12.214 -3.672 4.391 1.00 3.04 C ATOM 201 O CYS 18 12.727 -4.776 4.617 1.00 3.04 O ATOM 202 N GLU 19 12.218 -3.081 3.180 1.00 2.39 N ATOM 204 CA GLU 19 12.755 -3.655 1.912 1.00 2.39 C ATOM 205 CB GLU 19 14.207 -4.158 2.028 1.00 2.39 C ATOM 206 CG GLU 19 15.241 -3.064 2.274 1.00 2.39 C ATOM 207 CD GLU 19 16.654 -3.605 2.381 1.00 2.39 C ATOM 208 OE1 GLU 19 17.340 -3.696 1.340 1.00 2.39 O ATOM 209 OE2 GLU 19 17.082 -3.938 3.507 1.00 2.39 O ATOM 210 C GLU 19 11.876 -4.780 1.360 1.00 2.39 C ATOM 211 O GLU 19 11.297 -5.546 2.142 1.00 2.39 O ATOM 212 N VAL 20 11.778 -4.877 0.026 1.00 2.82 N ATOM 214 CA VAL 20 10.960 -5.920 -0.611 1.00 2.82 C ATOM 215 CB VAL 20 9.916 -5.311 -1.643 1.00 2.82 C ATOM 216 CG1 VAL 20 8.863 -4.508 -0.913 1.00 2.82 C ATOM 217 CG2 VAL 20 10.592 -4.395 -2.678 1.00 2.82 C ATOM 218 C VAL 20 11.818 -7.034 -1.255 1.00 2.82 C ATOM 219 O VAL 20 12.677 -6.775 -2.107 1.00 2.82 O ATOM 220 N ARG 21 11.588 -8.262 -0.773 1.00 2.21 N ATOM 222 CA ARG 21 12.257 -9.503 -1.204 1.00 2.21 C ATOM 223 CB ARG 21 13.283 -9.991 -0.165 1.00 2.21 C ATOM 224 CG ARG 21 14.557 -9.149 -0.117 1.00 2.21 C ATOM 225 CD ARG 21 15.594 -9.736 0.823 1.00 2.21 C ATOM 226 NE ARG 21 16.816 -8.930 0.869 1.00 2.21 N ATOM 228 CZ ARG 21 17.891 -9.205 1.609 1.00 2.21 C ATOM 229 NH1 ARG 21 18.939 -8.395 1.565 1.00 2.21 N ATOM 232 NH2 ARG 21 17.931 -10.280 2.392 1.00 2.21 N ATOM 235 C ARG 21 11.187 -10.566 -1.452 1.00 2.21 C ATOM 236 O ARG 21 10.176 -10.586 -0.743 1.00 2.21 O ATOM 237 N CYS 22 11.427 -11.465 -2.414 1.00 3.05 N ATOM 239 CA CYS 22 10.477 -12.532 -2.775 1.00 3.05 C ATOM 240 CB CYS 22 10.330 -12.608 -4.302 1.00 3.05 C ATOM 241 SG CYS 22 11.884 -12.828 -5.206 1.00 3.05 S ATOM 242 C CYS 22 10.955 -13.876 -2.185 1.00 3.05 C ATOM 243 O CYS 22 10.899 -14.933 -2.828 1.00 3.05 O ATOM 244 N ASP 23 11.393 -13.785 -0.921 1.00 2.38 N ATOM 246 CA ASP 23 11.893 -14.900 -0.101 1.00 2.38 C ATOM 247 CB ASP 23 13.412 -14.726 0.134 1.00 2.38 C ATOM 248 CG ASP 23 14.133 -16.049 0.406 1.00 2.38 C ATOM 249 OD1 ASP 23 14.279 -16.419 1.592 1.00 2.38 O ATOM 250 OD2 ASP 23 14.568 -16.707 -0.565 1.00 2.38 O ATOM 251 C ASP 23 11.108 -14.803 1.230 1.00 2.38 C ATOM 252 O ASP 23 10.026 -14.204 1.257 1.00 2.38 O ATOM 253 N GLU 24 11.640 -15.407 2.304 1.00 2.99 N ATOM 255 CA GLU 24 11.035 -15.392 3.648 1.00 2.99 C ATOM 256 CB GLU 24 10.931 -16.832 4.190 1.00 2.99 C ATOM 257 CG GLU 24 9.783 -17.081 5.178 1.00 2.99 C ATOM 258 CD GLU 24 9.739 -18.516 5.672 1.00 2.99 C ATOM 259 OE1 GLU 24 10.380 -18.812 6.701 1.00 2.99 O ATOM 260 OE2 GLU 24 9.059 -19.346 5.033 1.00 2.99 O ATOM 261 C GLU 24 11.937 -14.488 4.535 1.00 2.99 C ATOM 262 O GLU 24 12.154 -14.762 5.726 1.00 2.99 O ATOM 263 N SER 25 12.411 -13.392 3.925 1.00 3.45 N ATOM 265 CA SER 25 13.305 -12.393 4.539 1.00 3.45 C ATOM 266 CB SER 25 14.384 -12.001 3.524 1.00 3.45 C ATOM 267 OG SER 25 15.153 -13.126 3.132 1.00 3.45 O ATOM 269 C SER 25 12.584 -11.125 5.030 1.00 3.45 C ATOM 270 O SER 25 11.399 -10.934 4.736 1.00 3.45 O ATOM 271 N ASN 26 13.314 -10.265 5.772 1.00 3.54 N ATOM 273 CA ASN 26 12.847 -8.968 6.340 1.00 3.54 C ATOM 274 CB ASN 26 12.613 -7.928 5.215 1.00 3.54 C ATOM 275 CG ASN 26 13.874 -7.633 4.409 1.00 3.54 C ATOM 276 OD1 ASN 26 14.134 -8.267 3.386 1.00 3.54 O ATOM 277 ND2 ASN 26 14.656 -6.656 4.864 1.00 3.54 N ATOM 280 C ASN 26 11.607 -9.083 7.260 1.00 3.54 C ATOM 281 O ASN 26 11.290 -10.192 7.709 1.00 3.54 O ATOM 282 N HIS 27 10.933 -7.954 7.548 1.00 3.69 N ATOM 284 CA HIS 27 9.713 -7.907 8.385 1.00 3.69 C ATOM 285 CG HIS 27 8.687 -6.238 10.032 1.00 3.69 C ATOM 286 CD2 HIS 27 7.417 -5.932 10.393 1.00 3.69 C ATOM 287 ND1 HIS 27 9.406 -6.321 11.206 1.00 3.69 N ATOM 289 CE1 HIS 27 8.609 -6.077 12.230 1.00 3.69 C ATOM 290 NE2 HIS 27 7.396 -5.838 11.764 1.00 3.69 N ATOM 292 C HIS 27 8.622 -8.627 7.567 1.00 3.69 C ATOM 293 O HIS 27 8.364 -8.253 6.415 1.00 3.69 O ATOM 294 CB HIS 27 9.311 -6.447 8.679 1.00 3.69 C ATOM 295 N CYS 28 8.041 -9.690 8.140 1.00 3.59 N ATOM 297 CA CYS 28 7.049 -10.508 7.431 1.00 3.59 C ATOM 298 CB CYS 28 7.688 -11.856 7.038 1.00 3.59 C ATOM 299 SG CYS 28 6.636 -13.037 6.148 1.00 3.59 S ATOM 300 C CYS 28 5.648 -10.775 7.997 1.00 3.59 C ATOM 301 O CYS 28 5.461 -11.011 9.197 1.00 3.59 O ATOM 302 N VAL 29 4.685 -10.694 7.067 1.00 3.44 N ATOM 304 CA VAL 29 3.245 -10.999 7.219 1.00 3.44 C ATOM 305 CB VAL 29 2.325 -9.734 6.975 1.00 3.44 C ATOM 306 CG1 VAL 29 0.873 -10.033 7.374 1.00 3.44 C ATOM 307 CG2 VAL 29 2.835 -8.529 7.766 1.00 3.44 C ATOM 308 C VAL 29 3.257 -11.922 5.974 1.00 3.44 C ATOM 309 O VAL 29 3.670 -11.467 4.894 1.00 3.44 O ATOM 310 N GLU 30 2.839 -13.190 6.090 1.00 3.07 N ATOM 312 CA GLU 30 2.949 -14.073 4.917 1.00 3.07 C ATOM 313 CB GLU 30 4.078 -15.118 5.116 1.00 3.07 C ATOM 314 CG GLU 30 4.037 -15.939 6.422 1.00 3.07 C ATOM 315 CD GLU 30 5.179 -16.930 6.525 1.00 3.07 C ATOM 316 OE1 GLU 30 6.243 -16.560 7.064 1.00 3.07 O ATOM 317 OE2 GLU 30 5.012 -18.082 6.068 1.00 3.07 O ATOM 318 C GLU 30 1.791 -14.722 4.150 1.00 3.07 C ATOM 319 O GLU 30 0.937 -15.426 4.703 1.00 3.07 O ATOM 320 N VAL 31 1.800 -14.381 2.856 1.00 2.77 N ATOM 322 CA VAL 31 0.944 -14.852 1.752 1.00 2.77 C ATOM 323 CB VAL 31 -0.082 -13.760 1.257 1.00 2.77 C ATOM 324 CG1 VAL 31 -0.813 -14.212 -0.026 1.00 2.77 C ATOM 325 CG2 VAL 31 -1.126 -13.529 2.329 1.00 2.77 C ATOM 326 C VAL 31 2.077 -15.059 0.725 1.00 2.77 C ATOM 327 O VAL 31 3.061 -14.302 0.762 1.00 2.77 O ATOM 328 N ARG 32 1.975 -16.046 -0.172 1.00 2.78 N ATOM 330 CA ARG 32 3.060 -16.230 -1.146 1.00 2.78 C ATOM 331 CB ARG 32 3.525 -17.707 -1.218 1.00 2.78 C ATOM 332 CG ARG 32 2.424 -18.793 -1.306 1.00 2.78 C ATOM 333 CD ARG 32 3.006 -20.204 -1.372 1.00 2.78 C ATOM 334 NE ARG 32 3.637 -20.618 -0.114 1.00 2.78 N ATOM 336 CZ ARG 32 4.220 -21.799 0.100 1.00 2.78 C ATOM 337 NH1 ARG 32 4.757 -22.056 1.285 1.00 2.78 N ATOM 340 NH2 ARG 32 4.274 -22.724 -0.854 1.00 2.78 N ATOM 343 C ARG 32 2.653 -15.680 -2.523 1.00 2.78 C ATOM 344 O ARG 32 1.667 -16.116 -3.132 1.00 2.78 O ATOM 345 N CYS 33 3.440 -14.690 -2.963 1.00 5.03 N ATOM 347 CA CYS 33 3.274 -13.978 -4.233 1.00 5.03 C ATOM 348 CB CYS 33 2.722 -12.564 -3.991 1.00 5.03 C ATOM 349 SG CYS 33 1.054 -12.533 -3.296 1.00 5.03 S ATOM 350 C CYS 33 4.619 -13.934 -4.966 1.00 5.03 C ATOM 351 O CYS 33 4.718 -13.356 -6.058 1.00 5.03 O ATOM 352 N SER 34 5.626 -14.608 -4.386 1.00 5.16 N ATOM 354 CA SER 34 7.004 -14.711 -4.919 1.00 5.16 C ATOM 355 CB SER 34 7.892 -15.486 -3.933 1.00 5.16 C ATOM 356 OG SER 34 7.335 -16.750 -3.610 1.00 5.16 O ATOM 358 C SER 34 7.024 -15.377 -6.312 1.00 5.16 C ATOM 359 O SER 34 8.028 -15.317 -7.036 1.00 5.16 O ATOM 360 N ASP 35 5.873 -15.967 -6.663 1.00 5.23 N ATOM 362 CA ASP 35 5.615 -16.653 -7.936 1.00 5.23 C ATOM 363 CB ASP 35 5.180 -18.103 -7.669 1.00 5.23 C ATOM 364 CG ASP 35 6.288 -18.953 -7.053 1.00 5.23 C ATOM 365 OD1 ASP 35 6.380 -19.008 -5.807 1.00 5.23 O ATOM 366 OD2 ASP 35 7.056 -19.581 -7.815 1.00 5.23 O ATOM 367 C ASP 35 4.498 -15.900 -8.687 1.00 5.23 C ATOM 368 O ASP 35 4.397 -16.001 -9.917 1.00 5.23 O ATOM 369 N THR 36 3.689 -15.136 -7.932 1.00 5.80 N ATOM 371 CA THR 36 2.556 -14.337 -8.450 1.00 5.80 C ATOM 372 CB THR 36 1.286 -14.499 -7.534 1.00 5.80 C ATOM 373 OG1 THR 36 1.326 -15.776 -6.883 1.00 5.80 O ATOM 375 CG2 THR 36 -0.005 -14.424 -8.363 1.00 5.80 C ATOM 376 C THR 36 2.949 -12.841 -8.613 1.00 5.80 C ATOM 377 O THR 36 3.407 -12.449 -9.694 1.00 5.80 O ATOM 378 N LYS 37 2.768 -12.034 -7.554 1.00 4.01 N ATOM 380 CA LYS 37 3.096 -10.595 -7.538 1.00 4.01 C ATOM 381 CB LYS 37 1.862 -9.716 -7.202 1.00 4.01 C ATOM 382 CG LYS 37 0.796 -10.317 -6.269 1.00 4.01 C ATOM 383 CD LYS 37 -0.370 -9.355 -6.067 1.00 4.01 C ATOM 384 CE LYS 37 -1.482 -9.965 -5.216 1.00 4.01 C ATOM 385 NZ LYS 37 -1.098 -10.182 -3.790 1.00 4.01 N ATOM 389 C LYS 37 4.282 -10.307 -6.597 1.00 4.01 C ATOM 390 O LYS 37 4.096 -10.030 -5.403 1.00 4.01 O ATOM 391 N TYR 38 5.497 -10.414 -7.147 1.00 4.09 N ATOM 393 CA TYR 38 6.746 -10.191 -6.406 1.00 4.09 C ATOM 394 CB TYR 38 7.739 -11.363 -6.634 1.00 4.09 C ATOM 395 CG TYR 38 8.024 -11.788 -8.087 1.00 4.09 C ATOM 396 CD1 TYR 38 9.105 -11.229 -8.814 1.00 4.09 C ATOM 397 CE1 TYR 38 9.392 -11.641 -10.145 1.00 4.09 C ATOM 398 CD2 TYR 38 7.235 -12.773 -8.731 1.00 4.09 C ATOM 399 CE2 TYR 38 7.514 -13.190 -10.062 1.00 4.09 C ATOM 400 CZ TYR 38 8.592 -12.619 -10.757 1.00 4.09 C ATOM 401 OH TYR 38 8.864 -13.022 -12.045 1.00 4.09 O ATOM 403 C TYR 38 7.423 -8.840 -6.679 1.00 4.09 C ATOM 404 O TYR 38 7.618 -8.456 -7.840 1.00 4.09 O ATOM 405 N THR 39 7.740 -8.126 -5.589 1.00 3.43 N ATOM 407 CA THR 39 8.414 -6.819 -5.616 1.00 3.43 C ATOM 408 CB THR 39 7.632 -5.748 -4.789 1.00 3.43 C ATOM 409 OG1 THR 39 7.291 -6.282 -3.503 1.00 3.43 O ATOM 411 CG2 THR 39 6.363 -5.322 -5.517 1.00 3.43 C ATOM 412 C THR 39 9.839 -7.011 -5.061 1.00 3.43 C ATOM 413 O THR 39 10.017 -7.637 -4.004 1.00 3.43 O ATOM 414 N LEU 40 10.840 -6.550 -5.823 1.00 5.04 N ATOM 416 CA LEU 40 12.263 -6.664 -5.452 1.00 5.04 C ATOM 417 CB LEU 40 13.056 -7.464 -6.520 1.00 5.04 C ATOM 418 CG LEU 40 13.017 -7.269 -8.057 1.00 5.04 C ATOM 419 CD1 LEU 40 14.011 -6.198 -8.537 1.00 5.04 C ATOM 420 CD2 LEU 40 13.349 -8.597 -8.718 1.00 5.04 C ATOM 421 C LEU 40 12.941 -5.319 -5.133 1.00 5.04 C ATOM 422 O LEU 40 12.733 -4.328 -5.846 1.00 5.04 O ATOM 423 N CYS 41 13.738 -5.311 -4.055 1.00 4.89 N ATOM 425 CA CYS 41 14.472 -4.132 -3.564 1.00 4.89 C ATOM 426 CB CYS 41 14.198 -3.937 -2.063 1.00 4.89 C ATOM 427 SG CYS 41 14.853 -2.403 -1.353 1.00 4.89 S ATOM 428 C CYS 41 15.976 -4.279 -3.814 1.00 4.89 C ATOM 429 O CYS 41 16.639 -3.244 -4.042 1.00 4.89 O ATOM 430 OXT CYS 41 16.468 -5.428 -3.789 1.00 4.89 O TER END