####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 334), selected 41 , name T0955TS149_4 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS149_4.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 3.21 3.21 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 1 - 18 1.84 5.29 LONGEST_CONTINUOUS_SEGMENT: 18 2 - 19 1.89 4.44 LONGEST_CONTINUOUS_SEGMENT: 18 3 - 20 1.95 3.84 LONGEST_CONTINUOUS_SEGMENT: 18 4 - 21 1.96 3.58 LCS_AVERAGE: 38.67 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 4 - 15 0.80 5.75 LCS_AVERAGE: 18.02 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 4 18 41 3 4 7 10 15 17 27 31 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT Q 2 Q 2 4 18 41 4 4 6 10 15 23 28 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT E 3 E 3 4 18 41 4 5 10 14 22 26 31 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT T 4 T 4 12 18 41 4 9 12 18 24 27 32 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT R 5 R 5 12 18 41 10 10 12 18 24 27 32 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT K 6 K 6 12 18 41 10 10 14 19 24 27 32 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT K 7 K 7 12 18 41 10 10 12 19 24 27 32 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT C 8 C 8 12 18 41 10 10 12 18 24 27 32 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT T 9 T 9 12 18 41 10 10 14 19 24 27 32 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT E 10 E 10 12 18 41 10 10 14 19 24 27 32 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT M 11 M 11 12 18 41 10 10 12 19 24 27 32 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT K 12 K 12 12 18 41 10 10 14 19 24 27 32 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT K 13 K 13 12 18 41 10 10 14 19 24 27 32 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT K 14 K 14 12 18 41 10 10 12 19 24 27 32 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT F 15 F 15 12 18 41 4 5 12 14 18 27 32 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT K 16 K 16 5 18 41 4 5 5 13 14 24 32 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT N 17 N 17 5 18 41 4 8 14 19 24 27 32 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT C 18 C 18 5 18 41 4 12 15 19 24 27 32 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT E 19 E 19 5 18 41 3 10 15 18 24 27 32 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT V 20 V 20 5 18 41 5 12 15 19 24 27 32 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT R 21 R 21 5 18 41 4 12 15 17 24 27 32 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT C 22 C 22 5 9 41 3 5 12 16 18 20 28 33 36 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT D 23 D 23 4 9 41 3 12 15 16 20 26 32 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT E 24 E 24 4 9 41 3 4 14 17 23 27 32 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT S 25 S 25 4 10 41 3 4 8 13 18 27 31 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT N 26 N 26 4 10 41 3 4 4 8 18 26 31 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT H 27 H 27 7 15 41 4 12 15 16 21 26 32 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT C 28 C 28 7 15 41 4 12 15 16 20 26 32 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT V 29 V 29 7 15 41 4 12 15 16 21 27 32 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT E 30 E 30 7 15 41 4 12 15 19 24 27 32 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT V 31 V 31 7 15 41 5 12 15 19 24 27 32 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT R 32 R 32 7 15 41 4 10 13 16 23 27 32 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT C 33 C 33 7 15 41 4 9 12 16 18 19 28 34 36 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT S 34 S 34 7 15 41 4 9 12 15 17 19 22 25 29 35 39 41 41 41 41 41 41 41 41 41 LCS_GDT D 35 D 35 4 15 41 3 4 5 10 13 19 22 25 34 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT T 36 T 36 6 15 41 5 7 15 19 24 27 32 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT K 37 K 37 6 15 41 5 12 15 19 24 27 32 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT Y 38 Y 38 6 15 41 5 12 15 19 24 27 32 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT T 39 T 39 6 15 41 5 12 15 19 24 27 32 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT L 40 L 40 6 15 41 5 9 15 19 24 27 32 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_GDT C 41 C 41 6 15 41 4 8 14 19 24 27 32 34 37 38 40 41 41 41 41 41 41 41 41 41 LCS_AVERAGE LCS_A: 52.23 ( 18.02 38.67 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 12 15 19 24 27 32 34 37 38 40 41 41 41 41 41 41 41 41 41 GDT PERCENT_AT 24.39 29.27 36.59 46.34 58.54 65.85 78.05 82.93 90.24 92.68 97.56 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.33 0.68 0.88 1.50 1.75 1.92 2.27 2.41 2.75 2.81 3.05 3.21 3.21 3.21 3.21 3.21 3.21 3.21 3.21 3.21 GDT RMS_ALL_AT 6.43 4.85 4.73 3.44 3.35 3.39 3.33 3.34 3.29 3.26 3.23 3.21 3.21 3.21 3.21 3.21 3.21 3.21 3.21 3.21 # Checking swapping # possible swapping detected: E 24 E 24 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 7.136 0 0.222 0.328 10.505 0.000 0.000 10.505 LGA Q 2 Q 2 6.127 0 0.213 0.782 13.121 0.455 0.202 13.121 LGA E 3 E 3 4.833 0 0.060 0.880 9.773 7.727 3.434 9.773 LGA T 4 T 4 3.032 0 0.528 0.593 3.766 18.636 19.740 2.758 LGA R 5 R 5 2.378 0 0.414 1.217 6.274 38.636 19.669 6.274 LGA K 6 K 6 0.945 0 0.042 0.851 8.824 77.727 42.222 8.824 LGA K 7 K 7 2.233 0 0.054 1.121 9.131 45.000 22.222 9.131 LGA C 8 C 8 2.661 0 0.059 0.111 4.244 41.818 31.818 4.244 LGA T 9 T 9 1.278 0 0.057 0.094 2.350 73.636 60.260 2.131 LGA E 10 E 10 1.348 0 0.046 0.414 4.703 65.909 43.232 4.703 LGA M 11 M 11 1.807 0 0.054 0.932 2.969 58.182 48.409 2.089 LGA K 12 K 12 1.067 0 0.058 0.757 2.431 73.636 64.646 2.431 LGA K 13 K 13 1.868 0 0.056 0.841 6.049 51.364 28.485 4.469 LGA K 14 K 14 2.085 0 0.083 0.970 5.848 36.364 24.646 5.848 LGA F 15 F 15 3.098 0 0.479 0.528 6.088 27.727 10.744 6.088 LGA K 16 K 16 3.469 0 0.174 1.117 4.969 31.364 28.081 3.420 LGA N 17 N 17 1.622 0 0.529 0.681 5.753 42.727 26.136 4.112 LGA C 18 C 18 2.151 0 0.092 0.826 4.957 52.273 38.182 4.957 LGA E 19 E 19 2.558 0 0.366 0.801 3.164 35.909 30.303 3.142 LGA V 20 V 20 2.276 0 0.147 1.129 5.707 35.455 32.208 1.450 LGA R 21 R 21 2.328 0 0.103 1.150 5.282 32.727 23.471 3.428 LGA C 22 C 22 4.773 0 0.075 0.757 5.469 11.364 7.576 5.469 LGA D 23 D 23 3.927 0 0.088 1.113 4.794 10.455 6.591 4.794 LGA E 24 E 24 2.377 0 0.649 0.770 2.759 42.273 37.576 2.689 LGA S 25 S 25 3.796 0 0.271 0.858 6.436 16.364 11.212 6.436 LGA N 26 N 26 3.739 0 0.402 1.228 8.053 32.727 16.591 4.817 LGA H 27 H 27 3.775 0 0.412 1.132 9.655 17.273 6.909 9.464 LGA C 28 C 28 3.641 0 0.097 0.854 5.767 16.818 13.030 5.767 LGA V 29 V 29 3.025 0 0.115 0.131 3.587 20.455 19.740 2.993 LGA E 30 E 30 1.376 0 0.087 0.784 2.458 61.818 59.596 2.245 LGA V 31 V 31 1.461 0 0.054 0.088 3.132 62.273 44.675 3.132 LGA R 32 R 32 2.841 0 0.253 1.330 7.772 20.909 13.058 7.772 LGA C 33 C 33 5.226 0 0.554 0.948 6.938 1.364 0.909 5.161 LGA S 34 S 34 7.583 0 0.480 0.910 8.345 0.000 0.000 7.876 LGA D 35 D 35 6.352 0 0.316 0.312 6.901 0.909 0.455 5.429 LGA T 36 T 36 2.200 0 0.128 1.055 3.786 34.545 44.156 2.226 LGA K 37 K 37 1.016 0 0.072 0.639 2.195 61.818 62.828 0.918 LGA Y 38 Y 38 1.073 0 0.067 1.055 3.697 69.545 51.364 3.697 LGA T 39 T 39 0.584 0 0.203 1.032 3.787 86.818 64.416 2.982 LGA L 40 L 40 1.436 0 0.196 0.334 3.949 55.909 37.727 3.749 LGA C 41 C 41 0.926 1 0.099 0.125 3.643 74.091 49.351 3.643 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 334 99.70 41 41 SUMMARY(RMSD_GDC): 3.213 3.065 4.026 37.683 27.948 14.058 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 34 2.41 64.634 62.726 1.353 LGA_LOCAL RMSD: 2.413 Number of atoms: 34 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 3.342 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 3.213 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.864084 * X + -0.495636 * Y + 0.087769 * Z + 15.534267 Y_new = -0.426425 * X + 0.813464 * Y + 0.395523 * Z + -22.265673 Z_new = -0.267433 * X + 0.304338 * Y + -0.914253 * Z + 25.808161 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.683159 0.270728 2.820249 [DEG: -153.7337 15.5115 161.5884 ] ZXZ: 2.923224 2.724457 -0.720942 [DEG: 167.4884 156.0999 -41.3069 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS149_4 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS149_4.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 34 2.41 62.726 3.21 REMARK ---------------------------------------------------------- MOLECULE T0955TS149_4 PFRMAT TS TARGET T0955 MODEL 4 PARENT 3oms_a ATOM 1 N SER 1 2.084 -10.471 -6.168 1.00 5.33 N ATOM 2 CA SER 1 3.079 -11.310 -5.469 1.00 5.33 C ATOM 3 C SER 1 3.017 -11.061 -4.001 1.00 5.33 C ATOM 4 O SER 1 2.086 -10.437 -3.495 1.00 5.33 O ATOM 5 CB SER 1 4.501 -10.983 -5.961 1.00 5.33 C ATOM 6 OG SER 1 4.654 -11.370 -7.319 1.00 5.33 O ATOM 7 N GLN 2 4.020 -11.583 -3.280 1.00 5.40 N ATOM 8 CA GLN 2 4.149 -11.438 -1.862 1.00 5.40 C ATOM 9 C GLN 2 4.454 -10.006 -1.554 1.00 5.40 C ATOM 10 O GLN 2 4.032 -9.480 -0.526 1.00 5.40 O ATOM 11 CB GLN 2 5.273 -12.320 -1.299 1.00 5.40 C ATOM 12 CG GLN 2 6.658 -11.956 -1.837 1.00 5.40 C ATOM 13 CD GLN 2 7.604 -13.087 -1.456 1.00 5.40 C ATOM 14 OE1 GLN 2 7.617 -14.144 -2.086 1.00 5.40 O ATOM 15 NE2 GLN 2 8.412 -12.869 -0.387 1.00 5.40 N ATOM 16 N GLU 3 5.167 -9.336 -2.478 1.00 6.59 N ATOM 17 CA GLU 3 5.695 -8.010 -2.296 1.00 6.59 C ATOM 18 C GLU 3 4.610 -7.056 -1.914 1.00 6.59 C ATOM 19 O GLU 3 4.805 -6.203 -1.052 1.00 6.59 O ATOM 20 CB GLU 3 6.322 -7.449 -3.586 1.00 6.59 C ATOM 21 CG GLU 3 7.571 -8.198 -4.062 1.00 6.59 C ATOM 22 CD GLU 3 7.907 -7.696 -5.460 1.00 6.59 C ATOM 23 OE1 GLU 3 7.082 -6.934 -6.028 1.00 6.59 O ATOM 24 OE2 GLU 3 8.990 -8.075 -5.982 1.00 6.59 O ATOM 25 N THR 4 3.416 -7.178 -2.508 1.00 4.47 N ATOM 26 CA THR 4 2.383 -6.235 -2.183 1.00 4.47 C ATOM 27 C THR 4 1.911 -6.565 -0.806 1.00 4.47 C ATOM 28 O THR 4 2.634 -7.177 -0.026 1.00 4.47 O ATOM 29 CB THR 4 1.197 -6.344 -3.094 1.00 4.47 C ATOM 30 OG1 THR 4 0.305 -5.256 -2.906 1.00 4.47 O ATOM 31 CG2 THR 4 0.478 -7.668 -2.790 1.00 4.47 C ATOM 32 N ARG 5 0.737 -6.050 -0.399 1.00 4.72 N ATOM 33 CA ARG 5 0.221 -6.523 0.852 1.00 4.72 C ATOM 34 C ARG 5 0.982 -5.920 1.989 1.00 4.72 C ATOM 35 O ARG 5 1.046 -4.703 2.160 1.00 4.72 O ATOM 36 CB ARG 5 0.253 -8.062 0.991 1.00 4.72 C ATOM 37 CG ARG 5 -0.713 -8.628 2.033 1.00 4.72 C ATOM 38 CD ARG 5 -0.611 -10.146 2.161 1.00 4.72 C ATOM 39 NE ARG 5 -0.674 -10.693 0.773 1.00 4.72 N ATOM 40 CZ ARG 5 -1.856 -11.072 0.205 1.00 4.72 C ATOM 41 NH1 ARG 5 -3.011 -11.014 0.929 1.00 4.72 N ATOM 42 NH2 ARG 5 -1.879 -11.515 -1.088 1.00 4.72 N ATOM 43 N LYS 6 1.569 -6.803 2.817 1.00 3.79 N ATOM 44 CA LYS 6 2.246 -6.431 4.022 1.00 3.79 C ATOM 45 C LYS 6 3.397 -5.520 3.720 1.00 3.79 C ATOM 46 O LYS 6 3.625 -4.556 4.449 1.00 3.79 O ATOM 47 CB LYS 6 2.776 -7.656 4.784 1.00 3.79 C ATOM 48 CG LYS 6 3.109 -7.378 6.249 1.00 3.79 C ATOM 49 CD LYS 6 3.164 -8.646 7.100 1.00 3.79 C ATOM 50 CE LYS 6 3.134 -8.367 8.604 1.00 3.79 C ATOM 51 NZ LYS 6 2.675 -9.571 9.334 1.00 3.79 N ATOM 52 N LYS 7 4.161 -5.784 2.646 1.00 3.81 N ATOM 53 CA LYS 7 5.270 -4.912 2.383 1.00 3.81 C ATOM 54 C LYS 7 4.719 -3.551 2.115 1.00 3.81 C ATOM 55 O LYS 7 5.286 -2.545 2.536 1.00 3.81 O ATOM 56 CB LYS 7 6.130 -5.340 1.184 1.00 3.81 C ATOM 57 CG LYS 7 6.910 -6.639 1.417 1.00 3.81 C ATOM 58 CD LYS 7 7.966 -6.531 2.523 1.00 3.81 C ATOM 59 CE LYS 7 9.244 -5.812 2.073 1.00 3.81 C ATOM 60 NZ LYS 7 10.305 -5.931 3.098 1.00 3.81 N ATOM 61 N CYS 8 3.582 -3.490 1.403 1.00 2.77 N ATOM 62 CA CYS 8 2.990 -2.221 1.115 1.00 2.77 C ATOM 63 C CYS 8 2.605 -1.588 2.411 1.00 2.77 C ATOM 64 O CYS 8 2.730 -0.379 2.593 1.00 2.77 O ATOM 65 CB CYS 8 1.728 -2.343 0.267 1.00 2.77 C ATOM 66 SG CYS 8 1.043 -0.701 -0.028 1.00 2.77 S ATOM 67 N THR 9 2.124 -2.424 3.348 1.00 2.95 N ATOM 68 CA THR 9 1.705 -1.992 4.647 1.00 2.95 C ATOM 69 C THR 9 2.905 -1.389 5.300 1.00 2.95 C ATOM 70 O THR 9 2.824 -0.369 5.979 1.00 2.95 O ATOM 71 CB THR 9 1.268 -3.150 5.491 1.00 2.95 C ATOM 72 OG1 THR 9 0.216 -3.863 4.854 1.00 2.95 O ATOM 73 CG2 THR 9 0.810 -2.608 6.853 1.00 2.95 C ATOM 74 N GLU 10 4.064 -2.032 5.097 1.00 3.42 N ATOM 75 CA GLU 10 5.311 -1.592 5.642 1.00 3.42 C ATOM 76 C GLU 10 5.627 -0.244 5.070 1.00 3.42 C ATOM 77 O GLU 10 6.038 0.672 5.783 1.00 3.42 O ATOM 78 CB GLU 10 6.427 -2.565 5.229 1.00 3.42 C ATOM 79 CG GLU 10 7.830 -2.256 5.740 1.00 3.42 C ATOM 80 CD GLU 10 8.727 -3.365 5.197 1.00 3.42 C ATOM 81 OE1 GLU 10 8.180 -4.461 4.898 1.00 3.42 O ATOM 82 OE2 GLU 10 9.960 -3.140 5.073 1.00 3.42 O ATOM 83 N MET 11 5.418 -0.089 3.753 1.00 3.41 N ATOM 84 CA MET 11 5.727 1.126 3.056 1.00 3.41 C ATOM 85 C MET 11 4.848 2.232 3.555 1.00 3.41 C ATOM 86 O MET 11 5.288 3.375 3.664 1.00 3.41 O ATOM 87 CB MET 11 5.529 0.987 1.538 1.00 3.41 C ATOM 88 CG MET 11 6.492 -0.034 0.931 1.00 3.41 C ATOM 89 SD MET 11 6.332 -0.296 -0.859 1.00 3.41 S ATOM 90 CE MET 11 7.450 -1.726 -0.864 1.00 3.41 C ATOM 91 N LYS 12 3.580 1.924 3.891 1.00 3.26 N ATOM 92 CA LYS 12 2.643 2.943 4.274 1.00 3.26 C ATOM 93 C LYS 12 3.170 3.676 5.466 1.00 3.26 C ATOM 94 O LYS 12 3.041 4.895 5.549 1.00 3.26 O ATOM 95 CB LYS 12 1.237 2.395 4.607 1.00 3.26 C ATOM 96 CG LYS 12 1.091 1.750 5.987 1.00 3.26 C ATOM 97 CD LYS 12 -0.335 1.283 6.281 1.00 3.26 C ATOM 98 CE LYS 12 -1.403 2.321 5.931 1.00 3.26 C ATOM 99 NZ LYS 12 -2.748 1.770 6.197 1.00 3.26 N ATOM 100 N LYS 13 3.802 2.959 6.413 1.00 3.64 N ATOM 101 CA LYS 13 4.322 3.571 7.607 1.00 3.64 C ATOM 102 C LYS 13 5.388 4.587 7.314 1.00 3.64 C ATOM 103 O LYS 13 5.458 5.614 7.988 1.00 3.64 O ATOM 104 CB LYS 13 4.935 2.572 8.611 1.00 3.64 C ATOM 105 CG LYS 13 4.076 2.251 9.842 1.00 3.64 C ATOM 106 CD LYS 13 2.777 1.482 9.603 1.00 3.64 C ATOM 107 CE LYS 13 2.016 1.188 10.901 1.00 3.64 C ATOM 108 NZ LYS 13 2.806 0.269 11.752 1.00 3.64 N ATOM 109 N LYS 14 6.233 4.348 6.294 1.00 3.81 N ATOM 110 CA LYS 14 7.404 5.160 6.099 1.00 3.81 C ATOM 111 C LYS 14 7.110 6.621 5.908 1.00 3.81 C ATOM 112 O LYS 14 7.719 7.453 6.579 1.00 3.81 O ATOM 113 CB LYS 14 8.256 4.688 4.909 1.00 3.81 C ATOM 114 CG LYS 14 9.015 3.392 5.206 1.00 3.81 C ATOM 115 CD LYS 14 9.954 3.543 6.408 1.00 3.81 C ATOM 116 CE LYS 14 10.731 2.280 6.784 1.00 3.81 C ATOM 117 NZ LYS 14 11.668 2.581 7.893 1.00 3.81 N ATOM 118 N PHE 15 6.175 7.011 5.025 1.00 3.79 N ATOM 119 CA PHE 15 6.023 8.430 4.854 1.00 3.79 C ATOM 120 C PHE 15 4.677 8.843 5.348 1.00 3.79 C ATOM 121 O PHE 15 3.756 8.031 5.418 1.00 3.79 O ATOM 122 CB PHE 15 6.234 8.891 3.403 1.00 3.79 C ATOM 123 CG PHE 15 7.698 8.714 3.173 1.00 3.79 C ATOM 124 CD1 PHE 15 8.200 7.499 2.762 1.00 3.79 C ATOM 125 CD2 PHE 15 8.579 9.747 3.399 1.00 3.79 C ATOM 126 CE1 PHE 15 9.550 7.329 2.557 1.00 3.79 C ATOM 127 CE2 PHE 15 9.929 9.579 3.193 1.00 3.79 C ATOM 128 CZ PHE 15 10.421 8.369 2.769 1.00 3.79 C ATOM 129 N LYS 16 4.541 10.126 5.748 1.00 2.79 N ATOM 130 CA LYS 16 3.318 10.575 6.351 1.00 2.79 C ATOM 131 C LYS 16 2.167 10.509 5.395 1.00 2.79 C ATOM 132 O LYS 16 1.128 9.934 5.711 1.00 2.79 O ATOM 133 CB LYS 16 3.402 12.008 6.909 1.00 2.79 C ATOM 134 CG LYS 16 4.464 12.158 8.003 1.00 2.79 C ATOM 135 CD LYS 16 4.346 11.121 9.123 1.00 2.79 C ATOM 136 CE LYS 16 3.212 11.382 10.116 1.00 2.79 C ATOM 137 NZ LYS 16 3.485 12.612 10.891 1.00 2.79 N ATOM 138 N ASN 17 2.292 11.067 4.177 1.00 2.69 N ATOM 139 CA ASN 17 1.135 10.958 3.339 1.00 2.69 C ATOM 140 C ASN 17 1.241 9.656 2.633 1.00 2.69 C ATOM 141 O ASN 17 1.700 9.592 1.493 1.00 2.69 O ATOM 142 CB ASN 17 1.017 12.031 2.240 1.00 2.69 C ATOM 143 CG ASN 17 0.439 13.302 2.842 1.00 2.69 C ATOM 144 OD1 ASN 17 -0.351 13.247 3.782 1.00 2.69 O ATOM 145 ND2 ASN 17 0.832 14.476 2.282 1.00 2.69 N ATOM 146 N CYS 18 0.809 8.570 3.297 1.00 2.23 N ATOM 147 CA CYS 18 0.897 7.306 2.638 1.00 2.23 C ATOM 148 C CYS 18 -0.260 6.495 3.113 1.00 2.23 C ATOM 149 O CYS 18 -0.546 6.460 4.309 1.00 2.23 O ATOM 150 CB CYS 18 2.197 6.555 2.976 1.00 2.23 C ATOM 151 SG CYS 18 2.370 5.006 2.049 1.00 2.23 S ATOM 152 N GLU 19 -0.969 5.829 2.182 1.00 1.94 N ATOM 153 CA GLU 19 -2.123 5.071 2.570 1.00 1.94 C ATOM 154 C GLU 19 -2.302 3.984 1.565 1.00 1.94 C ATOM 155 O GLU 19 -1.700 4.015 0.494 1.00 1.94 O ATOM 156 CB GLU 19 -3.407 5.908 2.544 1.00 1.94 C ATOM 157 CG GLU 19 -3.682 6.460 1.148 1.00 1.94 C ATOM 158 CD GLU 19 -4.747 7.532 1.268 1.00 1.94 C ATOM 159 OE1 GLU 19 -5.869 7.210 1.740 1.00 1.94 O ATOM 160 OE2 GLU 19 -4.452 8.695 0.883 1.00 1.94 O ATOM 161 N VAL 20 -3.140 2.980 1.894 1.00 1.77 N ATOM 162 CA VAL 20 -3.337 1.923 0.952 1.00 1.77 C ATOM 163 C VAL 20 -4.799 1.682 0.792 1.00 1.77 C ATOM 164 O VAL 20 -5.563 1.791 1.748 1.00 1.77 O ATOM 165 CB VAL 20 -2.757 0.616 1.391 1.00 1.77 C ATOM 166 CG1 VAL 20 -1.231 0.765 1.492 1.00 1.77 C ATOM 167 CG2 VAL 20 -3.433 0.208 2.712 1.00 1.77 C ATOM 168 N ARG 21 -5.212 1.369 -0.452 1.00 2.04 N ATOM 169 CA ARG 21 -6.567 0.997 -0.758 1.00 2.04 C ATOM 170 C ARG 21 -6.471 -0.059 -1.812 1.00 2.04 C ATOM 171 O ARG 21 -5.609 0.013 -2.686 1.00 2.04 O ATOM 172 CB ARG 21 -7.423 2.132 -1.341 1.00 2.04 C ATOM 173 CG ARG 21 -8.857 1.713 -1.681 1.00 2.04 C ATOM 174 CD ARG 21 -9.716 2.874 -2.178 1.00 2.04 C ATOM 175 NE ARG 21 -11.041 2.316 -2.555 1.00 2.04 N ATOM 176 CZ ARG 21 -11.983 2.113 -1.589 1.00 2.04 C ATOM 177 NH1 ARG 21 -11.676 2.355 -0.280 1.00 2.04 N ATOM 178 NH2 ARG 21 -13.227 1.678 -1.934 1.00 2.04 N ATOM 179 N CYS 22 -7.335 -1.093 -1.775 1.00 2.39 N ATOM 180 CA CYS 22 -7.150 -2.079 -2.801 1.00 2.39 C ATOM 181 C CYS 22 -8.182 -3.147 -2.658 1.00 2.39 C ATOM 182 O CYS 22 -8.859 -3.243 -1.637 1.00 2.39 O ATOM 183 CB CYS 22 -5.787 -2.770 -2.694 1.00 2.39 C ATOM 184 SG CYS 22 -5.627 -3.690 -1.135 1.00 2.39 S ATOM 185 N ASP 23 -8.357 -3.965 -3.716 1.00 2.99 N ATOM 186 CA ASP 23 -9.263 -5.064 -3.579 1.00 2.99 C ATOM 187 C ASP 23 -8.478 -6.167 -2.959 1.00 2.99 C ATOM 188 O ASP 23 -7.249 -6.152 -2.970 1.00 2.99 O ATOM 189 CB ASP 23 -9.906 -5.559 -4.890 1.00 2.99 C ATOM 190 CG ASP 23 -8.830 -6.062 -5.831 1.00 2.99 C ATOM 191 OD1 ASP 23 -7.654 -5.633 -5.680 1.00 2.99 O ATOM 192 OD2 ASP 23 -9.179 -6.881 -6.723 1.00 2.99 O ATOM 193 N GLU 24 -9.178 -7.167 -2.401 1.00 3.97 N ATOM 194 CA GLU 24 -8.524 -8.222 -1.688 1.00 3.97 C ATOM 195 C GLU 24 -7.773 -9.101 -2.640 1.00 3.97 C ATOM 196 O GLU 24 -8.067 -9.163 -3.834 1.00 3.97 O ATOM 197 CB GLU 24 -9.496 -9.056 -0.835 1.00 3.97 C ATOM 198 CG GLU 24 -10.035 -8.253 0.358 1.00 3.97 C ATOM 199 CD GLU 24 -11.037 -9.086 1.146 1.00 3.97 C ATOM 200 OE1 GLU 24 -11.988 -9.626 0.518 1.00 3.97 O ATOM 201 OE2 GLU 24 -10.866 -9.192 2.389 1.00 3.97 O ATOM 202 N SER 25 -6.750 -9.798 -2.103 1.00 4.41 N ATOM 203 CA SER 25 -5.864 -10.638 -2.859 1.00 4.41 C ATOM 204 C SER 25 -5.050 -9.739 -3.726 1.00 4.41 C ATOM 205 O SER 25 -4.319 -10.189 -4.607 1.00 4.41 O ATOM 206 CB SER 25 -6.585 -11.671 -3.749 1.00 4.41 C ATOM 207 OG SER 25 -5.634 -12.457 -4.454 1.00 4.41 O ATOM 208 N ASN 26 -5.151 -8.427 -3.448 1.00 3.23 N ATOM 209 CA ASN 26 -4.384 -7.404 -4.086 1.00 3.23 C ATOM 210 C ASN 26 -4.357 -7.626 -5.564 1.00 3.23 C ATOM 211 O ASN 26 -3.292 -7.813 -6.153 1.00 3.23 O ATOM 212 CB ASN 26 -2.946 -7.329 -3.549 1.00 3.23 C ATOM 213 CG ASN 26 -3.066 -7.195 -2.037 1.00 3.23 C ATOM 214 OD1 ASN 26 -3.327 -6.116 -1.509 1.00 3.23 O ATOM 215 ND2 ASN 26 -2.909 -8.348 -1.330 1.00 3.23 N ATOM 216 N HIS 27 -5.548 -7.650 -6.196 1.00 2.60 N ATOM 217 CA HIS 27 -5.592 -7.791 -7.621 1.00 2.60 C ATOM 218 C HIS 27 -4.886 -6.601 -8.179 1.00 2.60 C ATOM 219 O HIS 27 -3.981 -6.731 -9.002 1.00 2.60 O ATOM 220 CB HIS 27 -7.034 -7.782 -8.166 1.00 2.60 C ATOM 221 CG HIS 27 -7.147 -7.915 -9.657 1.00 2.60 C ATOM 222 ND1 HIS 27 -6.587 -8.932 -10.390 1.00 2.60 N ATOM 223 CD2 HIS 27 -7.803 -7.127 -10.551 1.00 2.60 C ATOM 224 CE1 HIS 27 -6.925 -8.711 -11.688 1.00 2.60 C ATOM 225 NE2 HIS 27 -7.662 -7.628 -11.834 1.00 2.60 N ATOM 226 N CYS 28 -5.276 -5.399 -7.717 1.00 2.49 N ATOM 227 CA CYS 28 -4.610 -4.199 -8.129 1.00 2.49 C ATOM 228 C CYS 28 -4.501 -3.366 -6.900 1.00 2.49 C ATOM 229 O CYS 28 -5.442 -3.291 -6.111 1.00 2.49 O ATOM 230 CB CYS 28 -5.367 -3.395 -9.205 1.00 2.49 C ATOM 231 SG CYS 28 -6.993 -2.797 -8.651 1.00 2.49 S ATOM 232 N VAL 29 -3.339 -2.723 -6.690 1.00 1.40 N ATOM 233 CA VAL 29 -3.204 -1.985 -5.475 1.00 1.40 C ATOM 234 C VAL 29 -2.942 -0.554 -5.801 1.00 1.40 C ATOM 235 O VAL 29 -2.172 -0.240 -6.705 1.00 1.40 O ATOM 236 CB VAL 29 -2.032 -2.419 -4.646 1.00 1.40 C ATOM 237 CG1 VAL 29 -1.948 -1.509 -3.410 1.00 1.40 C ATOM 238 CG2 VAL 29 -2.166 -3.918 -4.333 1.00 1.40 C ATOM 239 N GLU 30 -3.612 0.352 -5.064 1.00 1.45 N ATOM 240 CA GLU 30 -3.332 1.749 -5.188 1.00 1.45 C ATOM 241 C GLU 30 -2.826 2.149 -3.848 1.00 1.45 C ATOM 242 O GLU 30 -3.503 1.955 -2.838 1.00 1.45 O ATOM 243 CB GLU 30 -4.559 2.649 -5.424 1.00 1.45 C ATOM 244 CG GLU 30 -4.173 4.132 -5.513 1.00 1.45 C ATOM 245 CD GLU 30 -5.402 5.009 -5.280 1.00 1.45 C ATOM 246 OE1 GLU 30 -6.522 4.449 -5.152 1.00 1.45 O ATOM 247 OE2 GLU 30 -5.229 6.257 -5.212 1.00 1.45 O ATOM 248 N VAL 31 -1.604 2.694 -3.784 1.00 1.26 N ATOM 249 CA VAL 31 -1.117 3.126 -2.516 1.00 1.26 C ATOM 250 C VAL 31 -0.455 4.429 -2.776 1.00 1.26 C ATOM 251 O VAL 31 0.196 4.601 -3.801 1.00 1.26 O ATOM 252 CB VAL 31 -0.122 2.165 -1.959 1.00 1.26 C ATOM 253 CG1 VAL 31 0.438 2.688 -0.624 1.00 1.26 C ATOM 254 CG2 VAL 31 -0.854 0.816 -1.876 1.00 1.26 C ATOM 255 N ARG 32 -0.609 5.394 -1.854 1.00 1.66 N ATOM 256 CA ARG 32 -0.021 6.670 -2.111 1.00 1.66 C ATOM 257 C ARG 32 1.137 6.791 -1.190 1.00 1.66 C ATOM 258 O ARG 32 1.042 6.413 -0.029 1.00 1.66 O ATOM 259 CB ARG 32 -0.966 7.842 -1.791 1.00 1.66 C ATOM 260 CG ARG 32 -2.321 7.759 -2.499 1.00 1.66 C ATOM 261 CD ARG 32 -2.382 8.475 -3.847 1.00 1.66 C ATOM 262 NE ARG 32 -2.418 9.935 -3.567 1.00 1.66 N ATOM 263 CZ ARG 32 -3.565 10.499 -3.089 1.00 1.66 C ATOM 264 NH1 ARG 32 -4.652 9.714 -2.824 1.00 1.66 N ATOM 265 NH2 ARG 32 -3.625 11.845 -2.873 1.00 1.66 N ATOM 266 N CYS 33 2.279 7.285 -1.697 1.00 2.08 N ATOM 267 CA CYS 33 3.425 7.492 -0.865 1.00 2.08 C ATOM 268 C CYS 33 3.783 8.921 -1.091 1.00 2.08 C ATOM 269 O CYS 33 3.950 9.339 -2.235 1.00 2.08 O ATOM 270 CB CYS 33 4.627 6.631 -1.287 1.00 2.08 C ATOM 271 SG CYS 33 6.081 6.833 -0.219 1.00 2.08 S ATOM 272 N SER 34 3.915 9.713 -0.010 1.00 2.35 N ATOM 273 CA SER 34 4.209 11.101 -0.212 1.00 2.35 C ATOM 274 C SER 34 3.119 11.670 -1.069 1.00 2.35 C ATOM 275 O SER 34 3.360 12.509 -1.935 1.00 2.35 O ATOM 276 CB SER 34 5.561 11.335 -0.915 1.00 2.35 C ATOM 277 OG SER 34 5.801 12.724 -1.090 1.00 2.35 O ATOM 278 N ASP 35 1.883 11.188 -0.833 1.00 2.33 N ATOM 279 CA ASP 35 0.681 11.604 -1.497 1.00 2.33 C ATOM 280 C ASP 35 0.769 11.501 -2.991 1.00 2.33 C ATOM 281 O ASP 35 0.178 12.306 -3.708 1.00 2.33 O ATOM 282 CB ASP 35 0.158 12.995 -1.071 1.00 2.33 C ATOM 283 CG ASP 35 1.204 14.082 -1.283 1.00 2.33 C ATOM 284 OD1 ASP 35 2.143 14.160 -0.446 1.00 2.33 O ATOM 285 OD2 ASP 35 1.065 14.865 -2.262 1.00 2.33 O ATOM 286 N THR 36 1.493 10.490 -3.511 1.00 2.42 N ATOM 287 CA THR 36 1.448 10.282 -4.930 1.00 2.42 C ATOM 288 C THR 36 1.043 8.854 -5.108 1.00 2.42 C ATOM 289 O THR 36 1.452 7.980 -4.346 1.00 2.42 O ATOM 290 CB THR 36 2.737 10.548 -5.646 1.00 2.42 C ATOM 291 OG1 THR 36 2.540 10.572 -7.054 1.00 2.42 O ATOM 292 CG2 THR 36 3.722 9.448 -5.264 1.00 2.42 C ATOM 293 N LYS 37 0.195 8.596 -6.118 1.00 2.22 N ATOM 294 CA LYS 37 -0.390 7.301 -6.298 1.00 2.22 C ATOM 295 C LYS 37 0.593 6.340 -6.891 1.00 2.22 C ATOM 296 O LYS 37 1.341 6.673 -7.809 1.00 2.22 O ATOM 297 CB LYS 37 -1.668 7.380 -7.161 1.00 2.22 C ATOM 298 CG LYS 37 -2.400 6.055 -7.364 1.00 2.22 C ATOM 299 CD LYS 37 -1.676 5.055 -8.266 1.00 2.22 C ATOM 300 CE LYS 37 -1.616 5.517 -9.722 1.00 2.22 C ATOM 301 NZ LYS 37 -2.951 5.998 -10.146 1.00 2.22 N ATOM 302 N TYR 38 0.609 5.108 -6.340 1.00 2.21 N ATOM 303 CA TYR 38 1.459 4.063 -6.829 1.00 2.21 C ATOM 304 C TYR 38 0.625 2.828 -6.905 1.00 2.21 C ATOM 305 O TYR 38 -0.403 2.727 -6.238 1.00 2.21 O ATOM 306 CB TYR 38 2.623 3.678 -5.896 1.00 2.21 C ATOM 307 CG TYR 38 3.545 4.827 -5.694 1.00 2.21 C ATOM 308 CD1 TYR 38 4.452 5.176 -6.666 1.00 2.21 C ATOM 309 CD2 TYR 38 3.491 5.566 -4.535 1.00 2.21 C ATOM 310 CE1 TYR 38 5.310 6.232 -6.478 1.00 2.21 C ATOM 311 CE2 TYR 38 4.350 6.622 -4.342 1.00 2.21 C ATOM 312 CZ TYR 38 5.260 6.956 -5.317 1.00 2.21 C ATOM 313 OH TYR 38 6.137 8.045 -5.117 1.00 2.21 O ATOM 314 N THR 39 1.044 1.856 -7.743 1.00 2.93 N ATOM 315 CA THR 39 0.344 0.607 -7.811 1.00 2.93 C ATOM 316 C THR 39 1.316 -0.456 -7.414 1.00 2.93 C ATOM 317 O THR 39 2.520 -0.325 -7.634 1.00 2.93 O ATOM 318 CB THR 39 -0.173 0.258 -9.174 1.00 2.93 C ATOM 319 OG1 THR 39 -0.966 -0.920 -9.114 1.00 2.93 O ATOM 320 CG2 THR 39 1.022 0.053 -10.117 1.00 2.93 C ATOM 321 N LEU 40 0.819 -1.540 -6.794 1.00 3.41 N ATOM 322 CA LEU 40 1.740 -2.542 -6.365 1.00 3.41 C ATOM 323 C LEU 40 1.366 -3.829 -7.010 1.00 3.41 C ATOM 324 O LEU 40 0.200 -4.066 -7.325 1.00 3.41 O ATOM 325 CB LEU 40 1.742 -2.728 -4.837 1.00 3.41 C ATOM 326 CG LEU 40 2.119 -1.427 -4.092 1.00 3.41 C ATOM 327 CD1 LEU 40 1.034 -0.342 -4.242 1.00 3.41 C ATOM 328 CD2 LEU 40 2.504 -1.698 -2.630 1.00 3.41 C ATOM 329 N CYS 41 2.382 -4.675 -7.258 1.00 4.58 N ATOM 330 CA CYS 41 2.177 -5.963 -7.839 1.00 4.58 C ATOM 331 C CYS 41 2.386 -6.956 -6.699 1.00 4.58 C ATOM 332 O CYS 41 1.437 -7.730 -6.410 1.00 4.58 O ATOM 333 CB CYS 41 3.220 -6.311 -8.915 1.00 4.58 C ATOM 334 SG CYS 41 3.180 -5.207 -10.362 1.00 4.58 S TER 335 CYS 41 END