####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 334), selected 41 , name T0955TS149_3 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS149_3.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 35 1 - 35 4.89 7.01 LCS_AVERAGE: 82.51 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 24 2 - 25 1.93 9.97 LCS_AVERAGE: 46.70 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 2 - 16 0.76 9.89 LCS_AVERAGE: 23.14 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 23 35 3 3 3 4 16 20 21 23 25 27 27 29 32 33 34 34 36 39 41 41 LCS_GDT Q 2 Q 2 15 24 35 9 13 15 19 20 23 24 24 25 27 27 30 32 33 34 34 36 39 41 41 LCS_GDT E 3 E 3 15 24 35 10 13 15 19 20 23 24 24 25 27 28 30 32 33 34 34 36 39 41 41 LCS_GDT T 4 T 4 15 24 35 10 13 15 19 20 23 24 24 25 27 28 30 32 33 34 34 36 39 41 41 LCS_GDT R 5 R 5 15 24 35 10 13 15 19 20 23 24 24 25 27 28 30 32 33 34 34 36 39 41 41 LCS_GDT K 6 K 6 15 24 35 10 13 15 19 20 23 24 24 25 27 28 30 32 33 34 34 36 39 41 41 LCS_GDT K 7 K 7 15 24 35 10 13 15 19 20 23 24 24 25 27 28 30 32 33 34 34 36 39 41 41 LCS_GDT C 8 C 8 15 24 35 10 13 15 19 20 23 24 24 25 27 28 30 32 33 34 34 36 39 41 41 LCS_GDT T 9 T 9 15 24 35 10 13 15 19 20 23 24 24 25 27 28 30 32 33 34 34 36 39 41 41 LCS_GDT E 10 E 10 15 24 35 10 13 15 19 20 23 24 24 25 27 28 30 32 33 34 34 36 39 41 41 LCS_GDT M 11 M 11 15 24 35 10 13 15 19 20 23 24 24 25 27 28 30 32 33 34 34 36 39 41 41 LCS_GDT K 12 K 12 15 24 35 9 13 15 19 20 23 24 24 25 27 28 30 32 33 34 34 36 39 41 41 LCS_GDT K 13 K 13 15 24 35 10 13 15 19 20 23 24 24 25 27 28 30 32 33 34 34 36 39 41 41 LCS_GDT K 14 K 14 15 24 35 9 13 15 19 20 23 24 24 25 27 28 30 32 33 34 34 36 39 41 41 LCS_GDT F 15 F 15 15 24 35 5 12 15 19 20 23 24 24 25 27 28 30 32 33 34 34 36 39 41 41 LCS_GDT K 16 K 16 15 24 35 4 9 15 19 20 23 24 24 25 27 28 30 32 33 34 34 36 39 41 41 LCS_GDT N 17 N 17 7 24 35 3 10 14 19 20 23 24 24 25 27 28 30 32 33 34 34 36 39 41 41 LCS_GDT C 18 C 18 7 24 35 3 10 14 19 20 23 24 24 25 27 28 30 32 33 34 34 36 39 41 41 LCS_GDT E 19 E 19 7 24 35 3 6 9 19 20 23 24 24 25 27 28 30 32 33 34 34 36 39 41 41 LCS_GDT V 20 V 20 7 24 35 3 9 15 19 20 23 24 24 25 27 28 30 32 33 34 34 36 39 41 41 LCS_GDT R 21 R 21 7 24 35 4 6 14 17 20 23 24 24 25 25 28 30 32 33 34 34 36 39 41 41 LCS_GDT C 22 C 22 7 24 35 4 5 7 12 18 23 24 24 25 25 26 30 32 33 34 34 36 39 41 41 LCS_GDT D 23 D 23 7 24 35 4 6 14 17 20 23 24 24 25 25 28 30 32 33 34 34 36 39 41 41 LCS_GDT E 24 E 24 7 24 35 4 6 9 15 19 23 24 24 25 25 28 30 32 33 34 34 36 39 41 41 LCS_GDT S 25 S 25 5 24 35 3 5 7 10 19 22 24 24 25 26 28 30 32 33 34 34 36 39 41 41 LCS_GDT N 26 N 26 3 16 35 3 3 7 10 15 17 20 24 25 27 28 30 32 33 34 34 36 39 41 41 LCS_GDT H 27 H 27 8 16 35 3 7 8 9 15 21 22 24 25 27 27 30 32 33 34 34 36 39 41 41 LCS_GDT C 28 C 28 8 16 35 3 7 8 14 18 21 22 24 25 27 28 30 32 33 34 34 36 39 41 41 LCS_GDT V 29 V 29 8 16 35 5 7 8 10 17 21 22 24 25 27 28 30 32 33 34 34 36 39 41 41 LCS_GDT E 30 E 30 8 16 35 5 7 8 11 17 21 22 24 25 27 28 30 32 33 34 34 36 39 41 41 LCS_GDT V 31 V 31 8 16 35 5 7 8 10 15 17 21 24 25 27 28 30 32 33 34 34 36 39 41 41 LCS_GDT R 32 R 32 8 16 35 5 7 8 9 15 17 21 24 25 27 28 30 32 33 34 34 36 39 41 41 LCS_GDT C 33 C 33 8 16 35 5 7 8 10 15 17 17 22 25 26 27 30 32 33 34 34 36 39 41 41 LCS_GDT S 34 S 34 8 9 35 3 6 8 8 14 17 17 22 23 26 27 30 31 33 34 34 36 39 41 41 LCS_GDT D 35 D 35 4 7 35 3 3 5 5 8 14 16 19 21 24 24 29 31 33 33 34 36 39 41 41 LCS_GDT T 36 T 36 4 7 27 3 3 4 5 7 10 15 19 21 24 24 28 31 33 33 34 36 39 41 41 LCS_GDT K 37 K 37 5 7 27 3 5 5 5 7 8 15 18 21 24 25 29 31 33 33 34 35 39 41 41 LCS_GDT Y 38 Y 38 5 7 27 3 5 5 5 7 10 15 19 21 24 24 25 30 33 33 34 35 39 41 41 LCS_GDT T 39 T 39 5 7 27 3 5 5 5 7 8 15 19 21 24 25 29 31 33 33 34 35 39 41 41 LCS_GDT L 40 L 40 5 7 27 3 5 5 5 7 8 12 18 19 23 24 25 31 33 33 34 35 38 41 41 LCS_GDT C 41 C 41 5 7 27 3 5 5 5 6 7 15 19 21 24 25 29 31 33 33 34 35 38 41 41 LCS_AVERAGE LCS_A: 50.78 ( 23.14 46.70 82.51 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 13 15 19 20 23 24 24 25 27 28 30 32 33 34 34 36 39 41 41 GDT PERCENT_AT 24.39 31.71 36.59 46.34 48.78 56.10 58.54 58.54 60.98 65.85 68.29 73.17 78.05 80.49 82.93 82.93 87.80 95.12 100.00 100.00 GDT RMS_LOCAL 0.36 0.49 0.76 1.29 1.45 1.84 1.93 1.93 2.15 2.82 3.62 3.83 3.88 4.10 4.36 4.36 5.31 5.92 6.17 6.17 GDT RMS_ALL_AT 9.83 10.00 9.89 9.08 9.34 9.95 9.97 9.97 10.00 7.74 8.18 7.65 8.30 7.93 7.50 7.50 6.64 6.23 6.17 6.17 # Checking swapping # possible swapping detected: E 10 E 10 # possible swapping detected: F 15 F 15 # possible swapping detected: E 19 E 19 # possible swapping detected: E 24 E 24 # possible swapping detected: E 30 E 30 # possible swapping detected: D 35 D 35 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 5.475 0 0.455 0.552 6.222 0.455 0.303 5.965 LGA Q 2 Q 2 1.632 0 0.251 1.354 2.443 55.000 54.949 1.760 LGA E 3 E 3 1.568 0 0.078 0.923 3.779 54.545 43.838 3.779 LGA T 4 T 4 2.004 0 0.052 0.251 2.939 47.727 42.078 2.157 LGA R 5 R 5 1.411 0 0.081 1.106 8.070 70.000 37.190 8.070 LGA K 6 K 6 0.964 0 0.043 0.753 4.598 77.727 55.354 4.598 LGA K 7 K 7 1.223 0 0.055 0.627 1.801 65.455 62.222 1.801 LGA C 8 C 8 1.047 0 0.031 0.825 1.939 73.636 68.485 1.939 LGA T 9 T 9 1.130 0 0.034 1.078 3.331 69.545 58.961 3.331 LGA E 10 E 10 0.778 0 0.046 0.964 3.022 81.818 67.273 3.022 LGA M 11 M 11 0.795 0 0.083 1.020 5.350 81.818 56.591 5.350 LGA K 12 K 12 1.430 0 0.077 1.077 6.993 55.000 35.152 6.993 LGA K 13 K 13 1.321 0 0.044 1.554 7.382 65.455 40.808 7.094 LGA K 14 K 14 1.157 0 0.107 1.045 4.279 65.455 51.313 4.279 LGA F 15 F 15 1.609 0 0.477 1.354 8.257 36.364 21.157 8.097 LGA K 16 K 16 2.702 0 0.672 1.105 3.879 31.818 33.737 1.612 LGA N 17 N 17 2.485 0 0.385 1.252 4.172 41.364 29.545 3.564 LGA C 18 C 18 2.934 0 0.108 0.810 4.306 27.273 23.636 4.306 LGA E 19 E 19 2.993 0 0.297 0.648 4.769 32.727 26.465 4.769 LGA V 20 V 20 1.002 0 0.158 0.187 1.862 61.818 61.299 1.529 LGA R 21 R 21 1.275 0 0.102 1.350 3.243 65.909 49.752 1.784 LGA C 22 C 22 3.224 0 0.060 0.859 7.745 33.182 22.424 7.745 LGA D 23 D 23 1.792 0 0.182 1.149 5.543 26.818 20.909 3.771 LGA E 24 E 24 2.802 0 0.561 0.892 9.065 45.455 20.808 9.065 LGA S 25 S 25 3.041 0 0.643 0.812 6.146 11.818 7.879 6.146 LGA N 26 N 26 8.542 0 0.647 1.148 13.260 0.000 0.000 10.848 LGA H 27 H 27 9.632 0 0.453 1.154 12.407 0.000 0.000 12.360 LGA C 28 C 28 8.613 0 0.238 0.780 11.457 0.000 0.000 11.457 LGA V 29 V 29 7.954 0 0.167 0.192 8.342 0.000 0.000 7.554 LGA E 30 E 30 9.247 0 0.055 0.619 10.945 0.000 0.000 10.146 LGA V 31 V 31 9.870 0 0.020 0.084 10.458 0.000 0.000 10.262 LGA R 32 R 32 11.457 0 0.185 1.240 15.466 0.000 0.000 15.466 LGA C 33 C 33 12.104 0 0.534 0.972 12.480 0.000 0.000 12.250 LGA S 34 S 34 15.570 0 0.509 0.971 19.747 0.000 0.000 15.745 LGA D 35 D 35 21.524 0 0.072 1.066 24.888 0.000 0.000 20.688 LGA T 36 T 36 23.323 0 0.579 0.618 25.129 0.000 0.000 23.402 LGA K 37 K 37 22.370 0 0.187 0.922 23.659 0.000 0.000 23.659 LGA Y 38 Y 38 20.669 0 0.119 1.288 21.218 0.000 0.000 15.524 LGA T 39 T 39 19.488 0 0.162 1.015 20.453 0.000 0.000 20.453 LGA L 40 L 40 17.397 0 0.159 0.911 18.052 0.000 0.000 15.292 LGA C 41 C 41 18.344 1 0.458 1.110 20.211 0.000 0.000 18.842 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 334 99.70 41 41 SUMMARY(RMSD_GDC): 6.166 6.106 7.018 31.175 24.198 10.421 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 24 1.93 54.878 54.539 1.183 LGA_LOCAL RMSD: 1.929 Number of atoms: 24 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 9.975 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 6.166 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.334112 * X + -0.620314 * Y + 0.709634 * Z + -17.238821 Y_new = -0.847604 * X + -0.527039 * Y + -0.061630 * Z + 14.265828 Z_new = 0.412234 * X + -0.580897 * Y + -0.701870 * Z + 22.353092 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.195313 -0.424905 -2.450223 [DEG: -68.4864 -24.3452 -140.3874 ] ZXZ: 1.484167 2.348816 2.524419 [DEG: 85.0365 134.5772 144.6385 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS149_3 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS149_3.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 24 1.93 54.539 6.17 REMARK ---------------------------------------------------------- MOLECULE T0955TS149_3 PFRMAT TS TARGET T0955 MODEL 3 PARENT 3wva_b ATOM 1 N SER 1 -3.361 -11.153 -0.452 1.00 7.83 N ATOM 2 CA SER 1 -3.897 -11.441 0.894 1.00 7.83 C ATOM 3 C SER 1 -2.891 -11.043 1.920 1.00 7.83 C ATOM 4 O SER 1 -2.876 -9.908 2.391 1.00 7.83 O ATOM 5 CB SER 1 -4.147 -12.947 1.023 1.00 7.83 C ATOM 6 OG SER 1 -5.055 -13.362 0.012 1.00 7.83 O ATOM 7 N GLN 2 -2.016 -11.992 2.296 1.00 6.82 N ATOM 8 CA GLN 2 -1.002 -11.693 3.258 1.00 6.82 C ATOM 9 C GLN 2 -0.098 -10.679 2.636 1.00 6.82 C ATOM 10 O GLN 2 0.346 -9.737 3.290 1.00 6.82 O ATOM 11 CB GLN 2 -0.154 -12.924 3.620 1.00 6.82 C ATOM 12 CG GLN 2 -0.966 -14.044 4.272 1.00 6.82 C ATOM 13 CD GLN 2 -1.495 -13.530 5.602 1.00 6.82 C ATOM 14 OE1 GLN 2 -0.961 -12.578 6.171 1.00 6.82 O ATOM 15 NE2 GLN 2 -2.576 -14.176 6.115 1.00 6.82 N ATOM 16 N GLU 3 0.186 -10.849 1.332 1.00 6.09 N ATOM 17 CA GLU 3 1.074 -9.970 0.628 1.00 6.09 C ATOM 18 C GLU 3 0.492 -8.594 0.635 1.00 6.09 C ATOM 19 O GLU 3 1.194 -7.611 0.863 1.00 6.09 O ATOM 20 CB GLU 3 1.259 -10.377 -0.846 1.00 6.09 C ATOM 21 CG GLU 3 2.200 -9.466 -1.640 1.00 6.09 C ATOM 22 CD GLU 3 2.157 -9.910 -3.096 1.00 6.09 C ATOM 23 OE1 GLU 3 1.026 -10.091 -3.619 1.00 6.09 O ATOM 24 OE2 GLU 3 3.248 -10.079 -3.706 1.00 6.09 O ATOM 25 N THR 4 -0.826 -8.485 0.399 1.00 4.76 N ATOM 26 CA THR 4 -1.418 -7.185 0.331 1.00 4.76 C ATOM 27 C THR 4 -1.332 -6.537 1.670 1.00 4.76 C ATOM 28 O THR 4 -1.110 -5.332 1.769 1.00 4.76 O ATOM 29 CB THR 4 -2.847 -7.180 -0.110 1.00 4.76 C ATOM 30 OG1 THR 4 -3.209 -5.853 -0.448 1.00 4.76 O ATOM 31 CG2 THR 4 -3.744 -7.696 1.024 1.00 4.76 C ATOM 32 N ARG 5 -1.511 -7.323 2.745 1.00 3.38 N ATOM 33 CA ARG 5 -1.493 -6.768 4.065 1.00 3.38 C ATOM 34 C ARG 5 -0.149 -6.161 4.289 1.00 3.38 C ATOM 35 O ARG 5 -0.028 -5.033 4.764 1.00 3.38 O ATOM 36 CB ARG 5 -1.655 -7.853 5.141 1.00 3.38 C ATOM 37 CG ARG 5 -2.914 -8.704 4.975 1.00 3.38 C ATOM 38 CD ARG 5 -2.953 -9.913 5.911 1.00 3.38 C ATOM 39 NE ARG 5 -3.315 -9.413 7.267 1.00 3.38 N ATOM 40 CZ ARG 5 -2.833 -10.042 8.379 1.00 3.38 C ATOM 41 NH1 ARG 5 -1.987 -11.105 8.249 1.00 3.38 N ATOM 42 NH2 ARG 5 -3.199 -9.607 9.619 1.00 3.38 N ATOM 43 N LYS 6 0.907 -6.915 3.942 1.00 3.07 N ATOM 44 CA LYS 6 2.242 -6.448 4.165 1.00 3.07 C ATOM 45 C LYS 6 2.531 -5.276 3.282 1.00 3.07 C ATOM 46 O LYS 6 3.167 -4.311 3.704 1.00 3.07 O ATOM 47 CB LYS 6 3.300 -7.547 3.944 1.00 3.07 C ATOM 48 CG LYS 6 3.322 -8.174 2.549 1.00 3.07 C ATOM 49 CD LYS 6 3.993 -7.317 1.476 1.00 3.07 C ATOM 50 CE LYS 6 4.227 -8.066 0.162 1.00 3.07 C ATOM 51 NZ LYS 6 4.954 -7.205 -0.788 1.00 3.07 N ATOM 52 N LYS 7 2.063 -5.323 2.024 1.00 2.81 N ATOM 53 CA LYS 7 2.362 -4.274 1.094 1.00 2.81 C ATOM 54 C LYS 7 1.737 -2.992 1.552 1.00 2.81 C ATOM 55 O LYS 7 2.356 -1.932 1.485 1.00 2.81 O ATOM 56 CB LYS 7 1.841 -4.563 -0.326 1.00 2.81 C ATOM 57 CG LYS 7 2.463 -3.662 -1.396 1.00 2.81 C ATOM 58 CD LYS 7 3.937 -3.970 -1.674 1.00 2.81 C ATOM 59 CE LYS 7 4.139 -5.113 -2.675 1.00 2.81 C ATOM 60 NZ LYS 7 5.583 -5.361 -2.885 1.00 2.81 N ATOM 61 N CYS 8 0.488 -3.052 2.045 1.00 2.33 N ATOM 62 CA CYS 8 -0.185 -1.846 2.422 1.00 2.33 C ATOM 63 C CYS 8 0.563 -1.182 3.534 1.00 2.33 C ATOM 64 O CYS 8 0.763 0.030 3.515 1.00 2.33 O ATOM 65 CB CYS 8 -1.627 -2.105 2.871 1.00 2.33 C ATOM 66 SG CYS 8 -2.582 -2.856 1.520 1.00 2.33 S ATOM 67 N THR 9 0.997 -1.963 4.539 1.00 2.55 N ATOM 68 CA THR 9 1.691 -1.388 5.654 1.00 2.55 C ATOM 69 C THR 9 3.030 -0.873 5.221 1.00 2.55 C ATOM 70 O THR 9 3.454 0.213 5.618 1.00 2.55 O ATOM 71 CB THR 9 1.897 -2.367 6.774 1.00 2.55 C ATOM 72 OG1 THR 9 2.442 -1.705 7.905 1.00 2.55 O ATOM 73 CG2 THR 9 2.832 -3.494 6.302 1.00 2.55 C ATOM 74 N GLU 10 3.740 -1.644 4.379 1.00 2.61 N ATOM 75 CA GLU 10 5.058 -1.249 3.993 1.00 2.61 C ATOM 76 C GLU 10 4.953 0.009 3.187 1.00 2.61 C ATOM 77 O GLU 10 5.733 0.942 3.366 1.00 2.61 O ATOM 78 CB GLU 10 5.777 -2.343 3.177 1.00 2.61 C ATOM 79 CG GLU 10 7.307 -2.230 3.170 1.00 2.61 C ATOM 80 CD GLU 10 7.726 -1.320 2.033 1.00 2.61 C ATOM 81 OE1 GLU 10 7.789 -0.081 2.251 1.00 2.61 O ATOM 82 OE2 GLU 10 7.977 -1.861 0.923 1.00 2.61 O ATOM 83 N MET 11 3.949 0.075 2.294 1.00 2.50 N ATOM 84 CA MET 11 3.788 1.215 1.443 1.00 2.50 C ATOM 85 C MET 11 3.488 2.415 2.280 1.00 2.50 C ATOM 86 O MET 11 4.024 3.493 2.033 1.00 2.50 O ATOM 87 CB MET 11 2.632 1.058 0.443 1.00 2.50 C ATOM 88 CG MET 11 2.649 2.117 -0.660 1.00 2.50 C ATOM 89 SD MET 11 1.287 1.993 -1.859 1.00 2.50 S ATOM 90 CE MET 11 1.642 0.282 -2.355 1.00 2.50 C ATOM 91 N LYS 12 2.629 2.264 3.308 1.00 2.30 N ATOM 92 CA LYS 12 2.265 3.402 4.099 1.00 2.30 C ATOM 93 C LYS 12 3.492 3.899 4.781 1.00 2.30 C ATOM 94 O LYS 12 3.737 5.102 4.850 1.00 2.30 O ATOM 95 CB LYS 12 1.205 3.082 5.176 1.00 2.30 C ATOM 96 CG LYS 12 1.684 2.206 6.343 1.00 2.30 C ATOM 97 CD LYS 12 2.478 2.955 7.417 1.00 2.30 C ATOM 98 CE LYS 12 3.118 2.035 8.460 1.00 2.30 C ATOM 99 NZ LYS 12 4.162 2.769 9.211 1.00 2.30 N ATOM 100 N LYS 13 4.313 2.965 5.286 1.00 2.11 N ATOM 101 CA LYS 13 5.470 3.349 6.032 1.00 2.11 C ATOM 102 C LYS 13 6.397 4.081 5.119 1.00 2.11 C ATOM 103 O LYS 13 6.969 5.105 5.490 1.00 2.11 O ATOM 104 CB LYS 13 6.230 2.144 6.610 1.00 2.11 C ATOM 105 CG LYS 13 7.094 2.473 7.833 1.00 2.11 C ATOM 106 CD LYS 13 8.124 3.580 7.617 1.00 2.11 C ATOM 107 CE LYS 13 7.655 4.942 8.137 1.00 2.11 C ATOM 108 NZ LYS 13 7.360 4.851 9.583 1.00 2.11 N ATOM 109 N LYS 14 6.554 3.589 3.877 1.00 2.42 N ATOM 110 CA LYS 14 7.513 4.205 3.011 1.00 2.42 C ATOM 111 C LYS 14 7.133 5.635 2.803 1.00 2.42 C ATOM 112 O LYS 14 7.959 6.528 2.984 1.00 2.42 O ATOM 113 CB LYS 14 7.603 3.543 1.624 1.00 2.42 C ATOM 114 CG LYS 14 8.817 4.008 0.815 1.00 2.42 C ATOM 115 CD LYS 14 10.147 3.487 1.363 1.00 2.42 C ATOM 116 CE LYS 14 10.552 2.129 0.782 1.00 2.42 C ATOM 117 NZ LYS 14 11.332 2.323 -0.461 1.00 2.42 N ATOM 118 N PHE 15 5.866 5.910 2.437 1.00 2.44 N ATOM 119 CA PHE 15 5.513 7.284 2.225 1.00 2.44 C ATOM 120 C PHE 15 5.564 8.016 3.526 1.00 2.44 C ATOM 121 O PHE 15 6.166 9.086 3.620 1.00 2.44 O ATOM 122 CB PHE 15 4.117 7.484 1.611 1.00 2.44 C ATOM 123 CG PHE 15 3.903 8.953 1.469 1.00 2.44 C ATOM 124 CD1 PHE 15 4.589 9.679 0.521 1.00 2.44 C ATOM 125 CD2 PHE 15 3.000 9.605 2.277 1.00 2.44 C ATOM 126 CE1 PHE 15 4.392 11.034 0.391 1.00 2.44 C ATOM 127 CE2 PHE 15 2.799 10.959 2.152 1.00 2.44 C ATOM 128 CZ PHE 15 3.495 11.677 1.208 1.00 2.44 C ATOM 129 N LYS 16 4.950 7.431 4.572 1.00 2.53 N ATOM 130 CA LYS 16 4.888 8.032 5.875 1.00 2.53 C ATOM 131 C LYS 16 3.773 9.030 5.907 1.00 2.53 C ATOM 132 O LYS 16 3.568 9.783 4.956 1.00 2.53 O ATOM 133 CB LYS 16 6.186 8.711 6.340 1.00 2.53 C ATOM 134 CG LYS 16 6.024 9.366 7.709 1.00 2.53 C ATOM 135 CD LYS 16 5.671 8.378 8.822 1.00 2.53 C ATOM 136 CE LYS 16 5.300 9.064 10.137 1.00 2.53 C ATOM 137 NZ LYS 16 4.774 8.067 11.092 1.00 2.53 N ATOM 138 N ASN 17 3.029 9.053 7.037 1.00 1.94 N ATOM 139 CA ASN 17 1.899 9.921 7.212 1.00 1.94 C ATOM 140 C ASN 17 0.988 9.748 6.044 1.00 1.94 C ATOM 141 O ASN 17 0.571 10.726 5.425 1.00 1.94 O ATOM 142 CB ASN 17 2.281 11.408 7.306 1.00 1.94 C ATOM 143 CG ASN 17 1.036 12.181 7.720 1.00 1.94 C ATOM 144 OD1 ASN 17 0.549 12.034 8.838 1.00 1.94 O ATOM 145 ND2 ASN 17 0.516 13.038 6.799 1.00 1.94 N ATOM 146 N CYS 18 0.648 8.488 5.706 1.00 1.52 N ATOM 147 CA CYS 18 -0.185 8.284 4.559 1.00 1.52 C ATOM 148 C CYS 18 -0.944 7.015 4.739 1.00 1.52 C ATOM 149 O CYS 18 -0.827 6.340 5.761 1.00 1.52 O ATOM 150 CB CYS 18 0.610 8.134 3.253 1.00 1.52 C ATOM 151 SG CYS 18 1.668 6.658 3.259 1.00 1.52 S ATOM 152 N GLU 19 -1.782 6.677 3.738 1.00 1.46 N ATOM 153 CA GLU 19 -2.502 5.442 3.802 1.00 1.46 C ATOM 154 C GLU 19 -2.161 4.676 2.568 1.00 1.46 C ATOM 155 O GLU 19 -1.959 5.251 1.500 1.00 1.46 O ATOM 156 CB GLU 19 -4.039 5.572 3.823 1.00 1.46 C ATOM 157 CG GLU 19 -4.647 6.085 2.514 1.00 1.46 C ATOM 158 CD GLU 19 -6.144 5.807 2.558 1.00 1.46 C ATOM 159 OE1 GLU 19 -6.717 5.785 3.680 1.00 1.46 O ATOM 160 OE2 GLU 19 -6.734 5.597 1.464 1.00 1.46 O ATOM 161 N VAL 20 -2.057 3.342 2.691 1.00 1.31 N ATOM 162 CA VAL 20 -1.791 2.541 1.537 1.00 1.31 C ATOM 163 C VAL 20 -2.840 1.489 1.470 1.00 1.31 C ATOM 164 O VAL 20 -3.307 0.992 2.494 1.00 1.31 O ATOM 165 CB VAL 20 -0.463 1.856 1.570 1.00 1.31 C ATOM 166 CG1 VAL 20 -0.406 0.828 0.425 1.00 1.31 C ATOM 167 CG2 VAL 20 0.610 2.951 1.465 1.00 1.31 C ATOM 168 N ARG 21 -3.268 1.147 0.242 1.00 1.12 N ATOM 169 CA ARG 21 -4.241 0.107 0.131 1.00 1.12 C ATOM 170 C ARG 21 -3.896 -0.710 -1.066 1.00 1.12 C ATOM 171 O ARG 21 -3.386 -0.192 -2.062 1.00 1.12 O ATOM 172 CB ARG 21 -5.684 0.598 -0.064 1.00 1.12 C ATOM 173 CG ARG 21 -6.701 -0.542 0.039 1.00 1.12 C ATOM 174 CD ARG 21 -8.130 -0.143 -0.336 1.00 1.12 C ATOM 175 NE ARG 21 -8.320 -0.485 -1.774 1.00 1.12 N ATOM 176 CZ ARG 21 -9.502 -0.201 -2.393 1.00 1.12 C ATOM 177 NH1 ARG 21 -10.490 0.448 -1.709 1.00 1.12 N ATOM 178 NH2 ARG 21 -9.693 -0.568 -3.693 1.00 1.12 N ATOM 179 N CYS 22 -4.140 -2.029 -0.984 1.00 1.55 N ATOM 180 CA CYS 22 -3.898 -2.884 -2.103 1.00 1.55 C ATOM 181 C CYS 22 -4.876 -4.003 -1.993 1.00 1.55 C ATOM 182 O CYS 22 -5.265 -4.381 -0.889 1.00 1.55 O ATOM 183 CB CYS 22 -2.491 -3.503 -2.117 1.00 1.55 C ATOM 184 SG CYS 22 -2.219 -4.556 -3.569 1.00 1.55 S ATOM 185 N ASP 23 -5.330 -4.535 -3.143 1.00 1.83 N ATOM 186 CA ASP 23 -6.254 -5.630 -3.121 1.00 1.83 C ATOM 187 C ASP 23 -5.835 -6.596 -4.183 1.00 1.83 C ATOM 188 O ASP 23 -5.584 -6.222 -5.327 1.00 1.83 O ATOM 189 CB ASP 23 -7.707 -5.245 -3.457 1.00 1.83 C ATOM 190 CG ASP 23 -8.575 -6.476 -3.225 1.00 1.83 C ATOM 191 OD1 ASP 23 -8.136 -7.366 -2.450 1.00 1.83 O ATOM 192 OD2 ASP 23 -9.680 -6.548 -3.827 1.00 1.83 O ATOM 193 N GLU 24 -5.762 -7.882 -3.811 1.00 1.58 N ATOM 194 CA GLU 24 -5.425 -8.951 -4.700 1.00 1.58 C ATOM 195 C GLU 24 -6.615 -9.835 -4.613 1.00 1.58 C ATOM 196 O GLU 24 -7.752 -9.362 -4.621 1.00 1.58 O ATOM 197 CB GLU 24 -4.236 -9.788 -4.200 1.00 1.58 C ATOM 198 CG GLU 24 -2.923 -9.008 -4.098 1.00 1.58 C ATOM 199 CD GLU 24 -1.944 -9.844 -3.280 1.00 1.58 C ATOM 200 OE1 GLU 24 -1.625 -10.987 -3.707 1.00 1.58 O ATOM 201 OE2 GLU 24 -1.507 -9.351 -2.205 1.00 1.58 O ATOM 202 N SER 25 -6.397 -11.157 -4.608 1.00 2.14 N ATOM 203 CA SER 25 -7.527 -11.985 -4.337 1.00 2.14 C ATOM 204 C SER 25 -7.650 -11.979 -2.851 1.00 2.14 C ATOM 205 O SER 25 -6.635 -11.935 -2.157 1.00 2.14 O ATOM 206 CB SER 25 -7.360 -13.443 -4.794 1.00 2.14 C ATOM 207 OG SER 25 -8.531 -14.188 -4.494 1.00 2.14 O ATOM 208 N ASN 26 -8.901 -11.976 -2.345 1.00 1.75 N ATOM 209 CA ASN 26 -9.226 -11.998 -0.945 1.00 1.75 C ATOM 210 C ASN 26 -9.644 -10.624 -0.543 1.00 1.75 C ATOM 211 O ASN 26 -9.981 -9.792 -1.384 1.00 1.75 O ATOM 212 CB ASN 26 -8.142 -12.513 0.030 1.00 1.75 C ATOM 213 CG ASN 26 -8.031 -14.026 -0.138 1.00 1.75 C ATOM 214 OD1 ASN 26 -8.601 -14.603 -1.063 1.00 1.75 O ATOM 215 ND2 ASN 26 -7.290 -14.691 0.788 1.00 1.75 N ATOM 216 N HIS 27 -9.667 -10.374 0.779 1.00 1.40 N ATOM 217 CA HIS 27 -10.038 -9.082 1.260 1.00 1.40 C ATOM 218 C HIS 27 -8.775 -8.297 1.339 1.00 1.40 C ATOM 219 O HIS 27 -7.867 -8.636 2.094 1.00 1.40 O ATOM 220 CB HIS 27 -10.678 -9.127 2.655 1.00 1.40 C ATOM 221 CG HIS 27 -11.940 -9.940 2.655 1.00 1.40 C ATOM 222 ND1 HIS 27 -11.980 -11.304 2.838 1.00 1.40 N ATOM 223 CD2 HIS 27 -13.230 -9.552 2.465 1.00 1.40 C ATOM 224 CE1 HIS 27 -13.284 -11.672 2.749 1.00 1.40 C ATOM 225 NE2 HIS 27 -14.080 -10.644 2.523 1.00 1.40 N ATOM 226 N CYS 28 -8.719 -7.202 0.563 1.00 1.36 N ATOM 227 CA CYS 28 -7.570 -6.362 0.406 1.00 1.36 C ATOM 228 C CYS 28 -7.183 -5.813 1.736 1.00 1.36 C ATOM 229 O CYS 28 -7.729 -6.195 2.769 1.00 1.36 O ATOM 230 CB CYS 28 -7.853 -5.166 -0.515 1.00 1.36 C ATOM 231 SG CYS 28 -9.065 -4.007 0.186 1.00 1.36 S ATOM 232 N VAL 29 -6.164 -4.935 1.749 1.00 0.89 N ATOM 233 CA VAL 29 -5.741 -4.375 2.992 1.00 0.89 C ATOM 234 C VAL 29 -5.647 -2.894 2.833 1.00 0.89 C ATOM 235 O VAL 29 -5.391 -2.381 1.746 1.00 0.89 O ATOM 236 CB VAL 29 -4.389 -4.854 3.427 1.00 0.89 C ATOM 237 CG1 VAL 29 -4.000 -4.118 4.720 1.00 0.89 C ATOM 238 CG2 VAL 29 -4.436 -6.383 3.570 1.00 0.89 C ATOM 239 N GLU 30 -5.899 -2.169 3.939 1.00 0.84 N ATOM 240 CA GLU 30 -5.770 -0.743 3.937 1.00 0.84 C ATOM 241 C GLU 30 -5.000 -0.408 5.167 1.00 0.84 C ATOM 242 O GLU 30 -5.294 -0.914 6.249 1.00 0.84 O ATOM 243 CB GLU 30 -7.117 -0.003 4.027 1.00 0.84 C ATOM 244 CG GLU 30 -7.997 -0.189 2.787 1.00 0.84 C ATOM 245 CD GLU 30 -9.293 0.580 3.006 1.00 0.84 C ATOM 246 OE1 GLU 30 -9.365 1.346 4.004 1.00 0.84 O ATOM 247 OE2 GLU 30 -10.228 0.415 2.179 1.00 0.84 O ATOM 248 N VAL 31 -3.967 0.442 5.035 1.00 0.66 N ATOM 249 CA VAL 31 -3.231 0.799 6.206 1.00 0.66 C ATOM 250 C VAL 31 -3.274 2.287 6.313 1.00 0.66 C ATOM 251 O VAL 31 -3.034 2.998 5.338 1.00 0.66 O ATOM 252 CB VAL 31 -1.785 0.403 6.149 1.00 0.66 C ATOM 253 CG1 VAL 31 -1.088 0.919 7.417 1.00 0.66 C ATOM 254 CG2 VAL 31 -1.694 -1.121 5.959 1.00 0.66 C ATOM 255 N ARG 32 -3.615 2.798 7.509 1.00 0.89 N ATOM 256 CA ARG 32 -3.601 4.214 7.702 1.00 0.89 C ATOM 257 C ARG 32 -2.527 4.477 8.699 1.00 0.89 C ATOM 258 O ARG 32 -2.552 3.954 9.810 1.00 0.89 O ATOM 259 CB ARG 32 -4.902 4.795 8.281 1.00 0.89 C ATOM 260 CG ARG 32 -4.811 6.306 8.509 1.00 0.89 C ATOM 261 CD ARG 32 -6.073 6.944 9.092 1.00 0.89 C ATOM 262 NE ARG 32 -5.715 8.347 9.448 1.00 0.89 N ATOM 263 CZ ARG 32 -6.669 9.230 9.863 1.00 0.89 C ATOM 264 NH1 ARG 32 -7.977 8.846 9.937 1.00 0.89 N ATOM 265 NH2 ARG 32 -6.308 10.502 10.205 1.00 0.89 N ATOM 266 N CYS 33 -1.541 5.302 8.308 1.00 1.08 N ATOM 267 CA CYS 33 -0.459 5.576 9.199 1.00 1.08 C ATOM 268 C CYS 33 -0.499 7.034 9.507 1.00 1.08 C ATOM 269 O CYS 33 -0.498 7.877 8.612 1.00 1.08 O ATOM 270 CB CYS 33 0.921 5.281 8.580 1.00 1.08 C ATOM 271 SG CYS 33 2.304 5.629 9.708 1.00 1.08 S ATOM 272 N SER 34 -0.547 7.361 10.809 1.00 1.55 N ATOM 273 CA SER 34 -0.551 8.733 11.206 1.00 1.55 C ATOM 274 C SER 34 0.380 8.803 12.362 1.00 1.55 C ATOM 275 O SER 34 0.880 7.781 12.827 1.00 1.55 O ATOM 276 CB SER 34 -1.919 9.242 11.695 1.00 1.55 C ATOM 277 OG SER 34 -2.295 8.560 12.882 1.00 1.55 O ATOM 278 N ASP 35 0.680 10.021 12.833 1.00 2.30 N ATOM 279 CA ASP 35 1.531 10.114 13.975 1.00 2.30 C ATOM 280 C ASP 35 0.778 9.487 15.097 1.00 2.30 C ATOM 281 O ASP 35 1.353 8.806 15.946 1.00 2.30 O ATOM 282 CB ASP 35 1.834 11.566 14.385 1.00 2.30 C ATOM 283 CG ASP 35 2.750 12.172 13.331 1.00 2.30 C ATOM 284 OD1 ASP 35 3.621 11.427 12.810 1.00 2.30 O ATOM 285 OD2 ASP 35 2.587 13.383 13.026 1.00 2.30 O ATOM 286 N THR 36 -0.549 9.718 15.115 1.00 2.81 N ATOM 287 CA THR 36 -1.382 9.246 16.178 1.00 2.81 C ATOM 288 C THR 36 -1.409 7.751 16.215 1.00 2.81 C ATOM 289 O THR 36 -1.134 7.159 17.257 1.00 2.81 O ATOM 290 CB THR 36 -2.803 9.714 16.051 1.00 2.81 C ATOM 291 OG1 THR 36 -2.851 11.134 16.006 1.00 2.81 O ATOM 292 CG2 THR 36 -3.586 9.206 17.273 1.00 2.81 C ATOM 293 N LYS 37 -1.716 7.080 15.083 1.00 2.74 N ATOM 294 CA LYS 37 -1.793 5.652 15.202 1.00 2.74 C ATOM 295 C LYS 37 -1.516 5.010 13.881 1.00 2.74 C ATOM 296 O LYS 37 -1.483 5.660 12.837 1.00 2.74 O ATOM 297 CB LYS 37 -3.178 5.137 15.642 1.00 2.74 C ATOM 298 CG LYS 37 -4.181 4.995 14.495 1.00 2.74 C ATOM 299 CD LYS 37 -4.468 6.289 13.732 1.00 2.74 C ATOM 300 CE LYS 37 -5.332 6.079 12.485 1.00 2.74 C ATOM 301 NZ LYS 37 -6.684 5.623 12.878 1.00 2.74 N ATOM 302 N TYR 38 -1.285 3.684 13.929 1.00 2.69 N ATOM 303 CA TYR 38 -1.066 2.863 12.777 1.00 2.69 C ATOM 304 C TYR 38 -2.144 1.832 12.774 1.00 2.69 C ATOM 305 O TYR 38 -2.288 1.073 13.732 1.00 2.69 O ATOM 306 CB TYR 38 0.299 2.156 12.824 1.00 2.69 C ATOM 307 CG TYR 38 0.249 0.946 11.957 1.00 2.69 C ATOM 308 CD1 TYR 38 0.295 1.021 10.585 1.00 2.69 C ATOM 309 CD2 TYR 38 0.165 -0.291 12.552 1.00 2.69 C ATOM 310 CE1 TYR 38 0.246 -0.128 9.830 1.00 2.69 C ATOM 311 CE2 TYR 38 0.118 -1.440 11.802 1.00 2.69 C ATOM 312 CZ TYR 38 0.159 -1.359 10.434 1.00 2.69 C ATOM 313 OH TYR 38 0.110 -2.535 9.656 1.00 2.69 O ATOM 314 N THR 39 -2.948 1.783 11.694 1.00 2.90 N ATOM 315 CA THR 39 -4.005 0.820 11.686 1.00 2.90 C ATOM 316 C THR 39 -3.894 -0.023 10.461 1.00 2.90 C ATOM 317 O THR 39 -3.534 0.452 9.385 1.00 2.90 O ATOM 318 CB THR 39 -5.380 1.421 11.679 1.00 2.90 C ATOM 319 OG1 THR 39 -6.353 0.414 11.916 1.00 2.90 O ATOM 320 CG2 THR 39 -5.623 2.088 10.314 1.00 2.90 C ATOM 321 N LEU 40 -4.193 -1.323 10.632 1.00 3.34 N ATOM 322 CA LEU 40 -4.195 -2.281 9.570 1.00 3.34 C ATOM 323 C LEU 40 -5.585 -2.813 9.514 1.00 3.34 C ATOM 324 O LEU 40 -6.193 -3.087 10.548 1.00 3.34 O ATOM 325 CB LEU 40 -3.296 -3.494 9.852 1.00 3.34 C ATOM 326 CG LEU 40 -3.328 -4.566 8.745 1.00 3.34 C ATOM 327 CD1 LEU 40 -2.708 -4.049 7.437 1.00 3.34 C ATOM 328 CD2 LEU 40 -2.712 -5.887 9.231 1.00 3.34 C ATOM 329 N CYS 41 -6.141 -2.964 8.301 1.00 4.15 N ATOM 330 CA CYS 41 -7.468 -3.489 8.223 1.00 4.15 C ATOM 331 C CYS 41 -7.657 -4.004 6.804 1.00 4.15 C ATOM 332 O CYS 41 -6.716 -3.831 5.985 1.00 4.15 O ATOM 333 CB CYS 41 -8.547 -2.428 8.483 1.00 4.15 C ATOM 334 SG CYS 41 -8.485 -1.084 7.261 1.00 4.15 S TER 335 CYS 41 END