####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 334), selected 41 , name T0955TS149_2 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS149_2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 3.34 3.34 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 3 - 22 1.86 3.82 LCS_AVERAGE: 40.81 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 3 - 16 0.90 6.12 LCS_AVERAGE: 22.37 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 4 41 3 3 4 5 5 7 7 11 28 31 35 39 39 40 41 41 41 41 41 41 LCS_GDT Q 2 Q 2 3 19 41 3 3 4 5 5 8 16 24 25 33 36 38 39 40 41 41 41 41 41 41 LCS_GDT E 3 E 3 14 20 41 9 12 15 20 25 32 34 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT T 4 T 4 14 20 41 9 12 15 20 24 32 34 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT R 5 R 5 14 20 41 9 12 15 20 25 32 34 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT K 6 K 6 14 20 41 9 12 15 20 25 32 34 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT K 7 K 7 14 20 41 9 12 15 20 25 32 34 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT C 8 C 8 14 20 41 9 12 14 20 25 32 34 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT T 9 T 9 14 20 41 9 12 14 20 25 32 34 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT E 10 E 10 14 20 41 9 12 15 20 25 32 34 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT M 11 M 11 14 20 41 7 12 15 20 25 32 34 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT K 12 K 12 14 20 41 9 12 15 20 25 32 34 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT K 13 K 13 14 20 41 6 12 14 20 25 32 34 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT K 14 K 14 14 20 41 5 12 14 19 23 32 34 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT F 15 F 15 14 20 41 3 11 14 15 23 32 34 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT K 16 K 16 14 20 41 3 4 6 14 22 32 34 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT N 17 N 17 12 20 41 4 11 15 20 25 32 34 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT C 18 C 18 5 20 41 3 13 16 20 25 32 34 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT E 19 E 19 5 20 41 5 11 16 20 25 32 34 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT V 20 V 20 5 20 41 7 13 16 20 25 32 34 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT R 21 R 21 5 20 41 7 13 16 18 25 32 34 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT C 22 C 22 5 20 41 3 6 16 18 22 30 34 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT D 23 D 23 4 9 41 3 8 16 18 22 32 34 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT E 24 E 24 4 9 41 3 3 10 16 22 32 34 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT S 25 S 25 4 10 41 3 3 5 10 19 21 30 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT N 26 N 26 4 10 41 3 3 5 8 13 21 26 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT H 27 H 27 6 15 41 4 13 16 18 25 32 34 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT C 28 C 28 6 15 41 4 13 16 18 25 32 34 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT V 29 V 29 9 15 41 7 13 16 18 25 32 34 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT E 30 E 30 9 15 41 7 13 16 20 25 32 34 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT V 31 V 31 9 15 41 5 13 16 20 25 32 34 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT R 32 R 32 9 15 41 3 7 14 18 23 32 34 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT C 33 C 33 9 15 41 3 7 12 16 19 20 29 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT S 34 S 34 9 15 41 3 7 10 16 18 20 22 25 32 36 39 39 39 40 41 41 41 41 41 41 LCS_GDT D 35 D 35 9 15 41 3 7 13 18 19 20 25 31 35 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT T 36 T 36 9 15 41 4 13 16 19 25 32 34 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT K 37 K 37 9 15 41 7 13 16 20 25 32 34 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT Y 38 Y 38 7 15 41 4 13 16 20 25 32 34 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT T 39 T 39 7 15 41 4 13 16 20 25 32 34 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT L 40 L 40 7 15 41 7 13 16 18 25 32 34 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_GDT C 41 C 41 7 15 41 7 13 16 18 25 32 34 35 36 38 39 39 39 40 41 41 41 41 41 41 LCS_AVERAGE LCS_A: 54.39 ( 22.37 40.81 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 13 16 20 25 32 34 35 36 38 39 39 39 40 41 41 41 41 41 41 GDT PERCENT_AT 21.95 31.71 39.02 48.78 60.98 78.05 82.93 85.37 87.80 92.68 95.12 95.12 95.12 97.56 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.35 0.59 0.76 1.40 1.82 2.13 2.22 2.35 2.47 2.71 2.90 2.90 2.90 3.16 3.34 3.34 3.34 3.34 3.34 3.34 GDT RMS_ALL_AT 5.26 5.25 4.87 3.62 3.55 3.49 3.50 3.50 3.42 3.40 3.42 3.42 3.42 3.35 3.34 3.34 3.34 3.34 3.34 3.34 # Checking swapping # possible swapping detected: E 10 E 10 # possible swapping detected: E 19 E 19 # possible swapping detected: E 24 E 24 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 9.157 0 0.227 0.661 9.490 0.000 0.000 8.844 LGA Q 2 Q 2 8.673 0 0.302 0.905 14.775 0.000 0.000 14.775 LGA E 3 E 3 2.449 0 0.614 1.427 4.796 26.364 24.646 3.574 LGA T 4 T 4 3.036 0 0.037 0.080 3.457 25.000 22.078 3.457 LGA R 5 R 5 2.292 0 0.085 0.878 5.286 35.455 21.818 5.286 LGA K 6 K 6 1.631 0 0.045 1.339 6.154 50.909 35.152 6.154 LGA K 7 K 7 2.355 0 0.074 1.221 7.845 38.182 22.020 7.845 LGA C 8 C 8 2.522 0 0.025 0.040 3.501 41.818 34.242 3.501 LGA T 9 T 9 1.452 0 0.049 1.032 2.527 61.818 51.948 2.527 LGA E 10 E 10 1.462 0 0.038 0.612 5.535 62.273 35.152 4.218 LGA M 11 M 11 2.280 0 0.068 1.418 4.434 47.727 32.500 3.173 LGA K 12 K 12 1.560 0 0.099 0.972 4.407 58.182 37.576 4.407 LGA K 13 K 13 2.397 0 0.040 1.185 3.296 42.273 37.172 3.070 LGA K 14 K 14 2.918 0 0.109 1.573 9.166 25.909 14.141 9.166 LGA F 15 F 15 2.951 0 0.458 0.503 5.372 30.000 13.223 5.372 LGA K 16 K 16 3.121 0 0.699 1.522 4.501 19.545 18.384 3.454 LGA N 17 N 17 1.656 0 0.331 0.962 6.569 55.455 32.727 5.629 LGA C 18 C 18 1.262 0 0.090 0.088 2.978 77.727 62.727 2.978 LGA E 19 E 19 1.488 0 0.351 0.419 2.108 61.818 54.343 1.811 LGA V 20 V 20 2.289 0 0.146 1.133 5.534 38.636 34.026 1.476 LGA R 21 R 21 2.420 0 0.087 1.243 5.323 35.455 21.322 3.635 LGA C 22 C 22 3.364 0 0.054 0.667 3.607 25.455 20.606 3.607 LGA D 23 D 23 2.796 0 0.044 0.528 4.404 30.455 20.000 3.924 LGA E 24 E 24 2.820 0 0.672 0.735 4.445 32.727 27.475 2.471 LGA S 25 S 25 5.726 0 0.293 0.303 7.386 1.364 0.909 7.386 LGA N 26 N 26 5.483 0 0.406 1.096 7.308 7.273 5.000 3.821 LGA H 27 H 27 2.278 0 0.392 0.315 5.479 33.636 16.182 4.090 LGA C 28 C 28 2.561 0 0.138 0.902 5.557 38.636 30.303 5.557 LGA V 29 V 29 2.217 0 0.125 1.035 3.356 35.455 32.208 3.356 LGA E 30 E 30 1.397 0 0.097 0.615 1.850 61.818 60.606 1.613 LGA V 31 V 31 1.456 0 0.101 1.021 3.563 61.818 49.610 3.563 LGA R 32 R 32 2.995 0 0.275 0.325 6.350 17.727 8.264 6.224 LGA C 33 C 33 4.887 0 0.439 0.730 5.391 3.636 3.636 4.446 LGA S 34 S 34 7.394 0 0.131 0.690 7.909 0.000 0.000 7.586 LGA D 35 D 35 5.625 0 0.151 1.203 5.907 2.727 2.955 4.534 LGA T 36 T 36 2.064 0 0.086 0.976 3.537 31.818 39.740 3.167 LGA K 37 K 37 1.259 0 0.085 0.700 1.851 61.818 65.657 1.235 LGA Y 38 Y 38 1.021 0 0.086 1.366 4.761 78.182 52.424 4.761 LGA T 39 T 39 0.395 0 0.167 0.165 1.381 95.455 82.597 1.303 LGA L 40 L 40 1.754 0 0.081 1.440 6.775 48.182 30.227 6.775 LGA C 41 C 41 2.304 1 0.065 0.789 3.374 33.636 30.130 2.183 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 334 99.70 41 41 SUMMARY(RMSD_GDC): 3.336 3.199 3.877 37.472 28.871 15.610 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 35 2.35 66.463 64.524 1.428 LGA_LOCAL RMSD: 2.351 Number of atoms: 35 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 3.498 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 3.336 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.782313 * X + -0.311845 * Y + 0.539202 * Z + 47.507599 Y_new = 0.360070 * X + -0.932769 * Y + -0.017048 * Z + -33.921688 Z_new = 0.508268 * X + 0.180814 * Y + 0.842004 * Z + -37.534664 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.710236 -0.533172 0.211530 [DEG: 155.2851 -30.5485 12.1198 ] ZXZ: 1.539190 0.569809 1.229012 [DEG: 88.1891 32.6477 70.4172 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS149_2 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS149_2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 35 2.35 64.524 3.34 REMARK ---------------------------------------------------------- MOLECULE T0955TS149_2 PFRMAT TS TARGET T0955 MODEL 2 PARENT 1tsj_a ATOM 1 N SER 1 4.651 -10.338 5.773 1.00 3.49 N ATOM 2 CA SER 1 5.647 -11.305 5.265 1.00 3.49 C ATOM 3 C SER 1 6.374 -10.757 4.077 1.00 3.49 C ATOM 4 O SER 1 6.326 -9.559 3.796 1.00 3.49 O ATOM 5 CB SER 1 4.514 -12.233 4.786 1.00 3.49 C ATOM 6 OG SER 1 5.042 -13.280 3.986 1.00 3.49 O ATOM 7 N GLN 2 7.106 -11.630 3.358 1.00 3.54 N ATOM 8 CA GLN 2 7.817 -11.184 2.197 1.00 3.54 C ATOM 9 C GLN 2 6.826 -11.060 1.090 1.00 3.54 C ATOM 10 O GLN 2 6.926 -11.737 0.067 1.00 3.54 O ATOM 11 CB GLN 2 8.873 -10.076 2.032 1.00 3.54 C ATOM 12 CG GLN 2 9.773 -9.950 3.262 1.00 3.54 C ATOM 13 CD GLN 2 10.689 -8.757 3.055 1.00 3.54 C ATOM 14 OE1 GLN 2 11.244 -8.212 4.007 1.00 3.54 O ATOM 15 NE2 GLN 2 10.831 -8.322 1.775 1.00 3.54 N ATOM 16 N GLU 3 5.813 -10.196 1.280 1.00 3.41 N ATOM 17 CA GLU 3 4.810 -10.114 0.267 1.00 3.41 C ATOM 18 C GLU 3 4.440 -8.698 0.017 1.00 3.41 C ATOM 19 O GLU 3 4.910 -7.769 0.670 1.00 3.41 O ATOM 20 CB GLU 3 3.502 -10.837 0.616 1.00 3.41 C ATOM 21 CG GLU 3 3.606 -12.348 0.475 1.00 3.41 C ATOM 22 CD GLU 3 3.809 -12.603 -1.007 1.00 3.41 C ATOM 23 OE1 GLU 3 3.417 -11.719 -1.814 1.00 3.41 O ATOM 24 OE2 GLU 3 4.367 -13.679 -1.352 1.00 3.41 O ATOM 25 N THR 4 3.542 -8.535 -0.968 1.00 2.09 N ATOM 26 CA THR 4 3.035 -7.278 -1.412 1.00 2.09 C ATOM 27 C THR 4 2.368 -6.577 -0.270 1.00 2.09 C ATOM 28 O THR 4 2.580 -5.382 -0.064 1.00 2.09 O ATOM 29 CB THR 4 2.033 -7.490 -2.509 1.00 2.09 C ATOM 30 OG1 THR 4 1.429 -6.257 -2.867 1.00 2.09 O ATOM 31 CG2 THR 4 0.979 -8.518 -2.056 1.00 2.09 C ATOM 32 N ARG 5 1.576 -7.313 0.526 1.00 1.95 N ATOM 33 CA ARG 5 0.843 -6.705 1.596 1.00 1.95 C ATOM 34 C ARG 5 1.803 -6.032 2.517 1.00 1.95 C ATOM 35 O ARG 5 1.621 -4.873 2.881 1.00 1.95 O ATOM 36 CB ARG 5 0.120 -7.757 2.446 1.00 1.95 C ATOM 37 CG ARG 5 -0.756 -7.176 3.552 1.00 1.95 C ATOM 38 CD ARG 5 -1.208 -8.244 4.545 1.00 1.95 C ATOM 39 NE ARG 5 -1.622 -9.422 3.736 1.00 1.95 N ATOM 40 CZ ARG 5 -1.309 -10.670 4.184 1.00 1.95 C ATOM 41 NH1 ARG 5 -0.691 -10.817 5.388 1.00 1.95 N ATOM 42 NH2 ARG 5 -1.621 -11.763 3.422 1.00 1.95 N ATOM 43 N LYS 6 2.870 -6.753 2.904 1.00 1.53 N ATOM 44 CA LYS 6 3.816 -6.222 3.844 1.00 1.53 C ATOM 45 C LYS 6 4.547 -5.069 3.250 1.00 1.53 C ATOM 46 O LYS 6 4.793 -4.076 3.933 1.00 1.53 O ATOM 47 CB LYS 6 4.844 -7.255 4.337 1.00 1.53 C ATOM 48 CG LYS 6 4.185 -8.308 5.225 1.00 1.53 C ATOM 49 CD LYS 6 4.983 -9.592 5.431 1.00 1.53 C ATOM 50 CE LYS 6 4.240 -10.573 6.338 1.00 1.53 C ATOM 51 NZ LYS 6 4.874 -11.905 6.282 1.00 1.53 N ATOM 52 N LYS 7 4.919 -5.152 1.962 1.00 1.64 N ATOM 53 CA LYS 7 5.668 -4.060 1.415 1.00 1.64 C ATOM 54 C LYS 7 4.822 -2.825 1.464 1.00 1.64 C ATOM 55 O LYS 7 5.284 -1.755 1.863 1.00 1.64 O ATOM 56 CB LYS 7 6.061 -4.286 -0.056 1.00 1.64 C ATOM 57 CG LYS 7 6.906 -3.153 -0.644 1.00 1.64 C ATOM 58 CD LYS 7 8.344 -3.108 -0.115 1.00 1.64 C ATOM 59 CE LYS 7 9.203 -2.019 -0.767 1.00 1.64 C ATOM 60 NZ LYS 7 8.860 -0.695 -0.206 1.00 1.64 N ATOM 61 N CYS 8 3.541 -2.955 1.083 1.00 1.25 N ATOM 62 CA CYS 8 2.681 -1.812 1.007 1.00 1.25 C ATOM 63 C CYS 8 2.533 -1.210 2.362 1.00 1.25 C ATOM 64 O CYS 8 2.682 0.000 2.532 1.00 1.25 O ATOM 65 CB CYS 8 1.275 -2.168 0.506 1.00 1.25 C ATOM 66 SG CYS 8 0.233 -0.702 0.251 1.00 1.25 S ATOM 67 N THR 9 2.273 -2.052 3.379 1.00 1.69 N ATOM 68 CA THR 9 2.030 -1.526 4.687 1.00 1.69 C ATOM 69 C THR 9 3.262 -0.840 5.185 1.00 1.69 C ATOM 70 O THR 9 3.169 0.193 5.847 1.00 1.69 O ATOM 71 CB THR 9 1.632 -2.564 5.704 1.00 1.69 C ATOM 72 OG1 THR 9 1.121 -1.931 6.868 1.00 1.69 O ATOM 73 CG2 THR 9 2.858 -3.420 6.070 1.00 1.69 C ATOM 74 N GLU 10 4.451 -1.404 4.892 1.00 1.81 N ATOM 75 CA GLU 10 5.652 -0.833 5.429 1.00 1.81 C ATOM 76 C GLU 10 5.900 0.541 4.897 1.00 1.81 C ATOM 77 O GLU 10 6.208 1.450 5.667 1.00 1.81 O ATOM 78 CB GLU 10 6.928 -1.648 5.154 1.00 1.81 C ATOM 79 CG GLU 10 8.158 -0.894 5.667 1.00 1.81 C ATOM 80 CD GLU 10 9.363 -1.821 5.721 1.00 1.81 C ATOM 81 OE1 GLU 10 9.620 -2.524 4.708 1.00 1.81 O ATOM 82 OE2 GLU 10 10.047 -1.837 6.779 1.00 1.81 O ATOM 83 N MET 11 5.775 0.736 3.569 1.00 1.73 N ATOM 84 CA MET 11 6.058 2.023 2.996 1.00 1.73 C ATOM 85 C MET 11 5.036 3.001 3.473 1.00 1.73 C ATOM 86 O MET 11 5.341 4.154 3.770 1.00 1.73 O ATOM 87 CB MET 11 6.063 2.021 1.456 1.00 1.73 C ATOM 88 CG MET 11 6.580 3.320 0.829 1.00 1.73 C ATOM 89 SD MET 11 7.037 3.161 -0.924 1.00 1.73 S ATOM 90 CE MET 11 5.355 2.807 -1.513 1.00 1.73 C ATOM 91 N LYS 12 3.780 2.544 3.588 1.00 1.76 N ATOM 92 CA LYS 12 2.713 3.413 3.982 1.00 1.76 C ATOM 93 C LYS 12 3.049 4.030 5.295 1.00 1.76 C ATOM 94 O LYS 12 2.936 5.242 5.461 1.00 1.76 O ATOM 95 CB LYS 12 1.411 2.626 4.210 1.00 1.76 C ATOM 96 CG LYS 12 0.373 3.348 5.069 1.00 1.76 C ATOM 97 CD LYS 12 -0.313 4.541 4.411 1.00 1.76 C ATOM 98 CE LYS 12 -1.325 5.194 5.354 1.00 1.76 C ATOM 99 NZ LYS 12 -2.329 4.191 5.794 1.00 1.76 N ATOM 100 N LYS 13 3.478 3.207 6.262 1.00 1.85 N ATOM 101 CA LYS 13 3.744 3.685 7.585 1.00 1.85 C ATOM 102 C LYS 13 4.908 4.631 7.615 1.00 1.85 C ATOM 103 O LYS 13 4.855 5.646 8.306 1.00 1.85 O ATOM 104 CB LYS 13 3.984 2.537 8.581 1.00 1.85 C ATOM 105 CG LYS 13 5.099 1.568 8.180 1.00 1.85 C ATOM 106 CD LYS 13 5.427 0.551 9.277 1.00 1.85 C ATOM 107 CE LYS 13 6.487 -0.475 8.871 1.00 1.85 C ATOM 108 NZ LYS 13 7.827 0.157 8.850 1.00 1.85 N ATOM 109 N LYS 14 5.988 4.348 6.864 1.00 2.05 N ATOM 110 CA LYS 14 7.171 5.158 6.959 1.00 2.05 C ATOM 111 C LYS 14 6.879 6.573 6.564 1.00 2.05 C ATOM 112 O LYS 14 7.166 7.500 7.321 1.00 2.05 O ATOM 113 CB LYS 14 8.291 4.628 6.052 1.00 2.05 C ATOM 114 CG LYS 14 9.696 5.153 6.362 1.00 2.05 C ATOM 115 CD LYS 14 9.902 6.656 6.163 1.00 2.05 C ATOM 116 CE LYS 14 11.368 7.066 6.321 1.00 2.05 C ATOM 117 NZ LYS 14 11.561 8.461 5.870 1.00 2.05 N ATOM 118 N PHE 15 6.275 6.782 5.376 1.00 2.70 N ATOM 119 CA PHE 15 5.982 8.120 4.941 1.00 2.70 C ATOM 120 C PHE 15 4.620 8.500 5.427 1.00 2.70 C ATOM 121 O PHE 15 3.745 7.655 5.603 1.00 2.70 O ATOM 122 CB PHE 15 5.991 8.308 3.413 1.00 2.70 C ATOM 123 CG PHE 15 7.406 8.266 2.938 1.00 2.70 C ATOM 124 CD1 PHE 15 8.045 7.068 2.725 1.00 2.70 C ATOM 125 CD2 PHE 15 8.088 9.439 2.710 1.00 2.70 C ATOM 126 CE1 PHE 15 9.348 7.044 2.284 1.00 2.70 C ATOM 127 CE2 PHE 15 9.390 9.426 2.268 1.00 2.70 C ATOM 128 CZ PHE 15 10.019 8.223 2.058 1.00 2.70 C ATOM 129 N LYS 16 4.412 9.807 5.672 1.00 2.79 N ATOM 130 CA LYS 16 3.125 10.264 6.104 1.00 2.79 C ATOM 131 C LYS 16 2.386 10.640 4.871 1.00 2.79 C ATOM 132 O LYS 16 2.935 10.599 3.771 1.00 2.79 O ATOM 133 CB LYS 16 3.136 11.557 6.941 1.00 2.79 C ATOM 134 CG LYS 16 3.710 11.466 8.356 1.00 2.79 C ATOM 135 CD LYS 16 5.229 11.308 8.446 1.00 2.79 C ATOM 136 CE LYS 16 5.761 11.691 9.828 1.00 2.79 C ATOM 137 NZ LYS 16 6.736 10.690 10.311 1.00 2.79 N ATOM 138 N ASN 17 1.100 10.994 5.036 1.00 2.87 N ATOM 139 CA ASN 17 0.305 11.453 3.941 1.00 2.87 C ATOM 140 C ASN 17 0.329 10.401 2.887 1.00 2.87 C ATOM 141 O ASN 17 0.384 10.686 1.692 1.00 2.87 O ATOM 142 CB ASN 17 0.830 12.774 3.352 1.00 2.87 C ATOM 143 CG ASN 17 -0.342 13.487 2.689 1.00 2.87 C ATOM 144 OD1 ASN 17 -1.485 13.047 2.784 1.00 2.87 O ATOM 145 ND2 ASN 17 -0.053 14.631 2.011 1.00 2.87 N ATOM 146 N CYS 18 0.295 9.132 3.330 1.00 2.21 N ATOM 147 CA CYS 18 0.261 8.028 2.420 1.00 2.21 C ATOM 148 C CYS 18 -1.013 7.314 2.737 1.00 2.21 C ATOM 149 O CYS 18 -1.546 7.469 3.835 1.00 2.21 O ATOM 150 CB CYS 18 1.398 7.015 2.652 1.00 2.21 C ATOM 151 SG CYS 18 3.052 7.733 2.415 1.00 2.21 S ATOM 152 N GLU 19 -1.558 6.537 1.781 1.00 1.85 N ATOM 153 CA GLU 19 -2.766 5.818 2.073 1.00 1.85 C ATOM 154 C GLU 19 -2.780 4.578 1.237 1.00 1.85 C ATOM 155 O GLU 19 -2.045 4.470 0.259 1.00 1.85 O ATOM 156 CB GLU 19 -4.060 6.575 1.737 1.00 1.85 C ATOM 157 CG GLU 19 -5.296 5.866 2.290 1.00 1.85 C ATOM 158 CD GLU 19 -6.502 6.341 1.505 1.00 1.85 C ATOM 159 OE1 GLU 19 -6.522 7.535 1.110 1.00 1.85 O ATOM 160 OE2 GLU 19 -7.415 5.505 1.273 1.00 1.85 O ATOM 161 N VAL 20 -3.616 3.590 1.625 1.00 1.61 N ATOM 162 CA VAL 20 -3.682 2.383 0.851 1.00 1.61 C ATOM 163 C VAL 20 -5.107 1.960 0.697 1.00 1.61 C ATOM 164 O VAL 20 -5.927 2.144 1.594 1.00 1.61 O ATOM 165 CB VAL 20 -3.043 1.204 1.519 1.00 1.61 C ATOM 166 CG1 VAL 20 -1.539 1.458 1.677 1.00 1.61 C ATOM 167 CG2 VAL 20 -3.781 0.959 2.847 1.00 1.61 C ATOM 168 N ARG 21 -5.431 1.390 -0.480 1.00 1.55 N ATOM 169 CA ARG 21 -6.701 0.763 -0.688 1.00 1.55 C ATOM 170 C ARG 21 -6.361 -0.506 -1.396 1.00 1.55 C ATOM 171 O ARG 21 -5.610 -0.489 -2.372 1.00 1.55 O ATOM 172 CB ARG 21 -7.674 1.544 -1.580 1.00 1.55 C ATOM 173 CG ARG 21 -9.000 0.799 -1.710 1.00 1.55 C ATOM 174 CD ARG 21 -10.108 1.578 -2.413 1.00 1.55 C ATOM 175 NE ARG 21 -11.216 0.615 -2.663 1.00 1.55 N ATOM 176 CZ ARG 21 -12.503 0.933 -2.338 1.00 1.55 C ATOM 177 NH1 ARG 21 -12.800 2.116 -1.725 1.00 1.55 N ATOM 178 NH2 ARG 21 -13.511 0.060 -2.625 1.00 1.55 N ATOM 179 N CYS 22 -6.870 -1.659 -0.920 1.00 1.27 N ATOM 180 CA CYS 22 -6.479 -2.867 -1.583 1.00 1.27 C ATOM 181 C CYS 22 -7.557 -3.891 -1.433 1.00 1.27 C ATOM 182 O CYS 22 -8.404 -3.803 -0.545 1.00 1.27 O ATOM 183 CB CYS 22 -5.148 -3.436 -1.047 1.00 1.27 C ATOM 184 SG CYS 22 -5.147 -3.630 0.761 1.00 1.27 S ATOM 185 N ASP 23 -7.557 -4.889 -2.336 1.00 1.57 N ATOM 186 CA ASP 23 -8.550 -5.915 -2.251 1.00 1.57 C ATOM 187 C ASP 23 -8.026 -6.988 -1.359 1.00 1.57 C ATOM 188 O ASP 23 -6.919 -6.900 -0.834 1.00 1.57 O ATOM 189 CB ASP 23 -8.940 -6.540 -3.598 1.00 1.57 C ATOM 190 CG ASP 23 -9.680 -5.469 -4.389 1.00 1.57 C ATOM 191 OD1 ASP 23 -9.711 -4.294 -3.930 1.00 1.57 O ATOM 192 OD2 ASP 23 -10.225 -5.813 -5.467 1.00 1.57 O ATOM 193 N GLU 24 -8.848 -8.034 -1.165 1.00 1.95 N ATOM 194 CA GLU 24 -8.516 -9.132 -0.312 1.00 1.95 C ATOM 195 C GLU 24 -7.428 -9.894 -0.997 1.00 1.95 C ATOM 196 O GLU 24 -7.423 -10.016 -2.220 1.00 1.95 O ATOM 197 CB GLU 24 -9.735 -10.045 -0.122 1.00 1.95 C ATOM 198 CG GLU 24 -10.898 -9.298 0.533 1.00 1.95 C ATOM 199 CD GLU 24 -12.195 -9.920 0.053 1.00 1.95 C ATOM 200 OE1 GLU 24 -12.137 -10.861 -0.783 1.00 1.95 O ATOM 201 OE2 GLU 24 -13.268 -9.440 0.503 1.00 1.95 O ATOM 202 N SER 25 -6.448 -10.407 -0.226 1.00 2.03 N ATOM 203 CA SER 25 -5.375 -11.167 -0.804 1.00 2.03 C ATOM 204 C SER 25 -4.597 -10.278 -1.729 1.00 2.03 C ATOM 205 O SER 25 -3.788 -10.740 -2.534 1.00 2.03 O ATOM 206 CB SER 25 -5.873 -12.400 -1.577 1.00 2.03 C ATOM 207 OG SER 25 -6.477 -13.320 -0.678 1.00 2.03 O ATOM 208 N ASN 26 -4.828 -8.962 -1.601 1.00 1.47 N ATOM 209 CA ASN 26 -4.132 -7.930 -2.309 1.00 1.47 C ATOM 210 C ASN 26 -3.942 -8.266 -3.752 1.00 1.47 C ATOM 211 O ASN 26 -2.810 -8.388 -4.219 1.00 1.47 O ATOM 212 CB ASN 26 -2.772 -7.566 -1.707 1.00 1.47 C ATOM 213 CG ASN 26 -2.452 -6.175 -2.228 1.00 1.47 C ATOM 214 OD1 ASN 26 -2.410 -5.941 -3.435 1.00 1.47 O ATOM 215 ND2 ASN 26 -2.248 -5.212 -1.290 1.00 1.47 N ATOM 216 N HIS 27 -5.053 -8.439 -4.492 1.00 1.29 N ATOM 217 CA HIS 27 -4.940 -8.662 -5.901 1.00 1.29 C ATOM 218 C HIS 27 -4.317 -7.422 -6.447 1.00 1.29 C ATOM 219 O HIS 27 -3.374 -7.471 -7.235 1.00 1.29 O ATOM 220 CB HIS 27 -6.306 -8.831 -6.591 1.00 1.29 C ATOM 221 CG HIS 27 -6.972 -10.132 -6.262 1.00 1.29 C ATOM 222 ND1 HIS 27 -6.907 -11.246 -7.070 1.00 1.29 N ATOM 223 CD2 HIS 27 -7.710 -10.494 -5.182 1.00 1.29 C ATOM 224 CE1 HIS 27 -7.606 -12.222 -6.440 1.00 1.29 C ATOM 225 NE2 HIS 27 -8.112 -11.816 -5.290 1.00 1.29 N ATOM 226 N CYS 28 -4.830 -6.258 -6.007 1.00 1.32 N ATOM 227 CA CYS 28 -4.296 -5.014 -6.473 1.00 1.32 C ATOM 228 C CYS 28 -4.190 -4.110 -5.289 1.00 1.32 C ATOM 229 O CYS 28 -4.927 -4.255 -4.317 1.00 1.32 O ATOM 230 CB CYS 28 -5.234 -4.278 -7.435 1.00 1.32 C ATOM 231 SG CYS 28 -6.712 -3.667 -6.564 1.00 1.32 S ATOM 232 N VAL 29 -3.238 -3.160 -5.336 1.00 0.96 N ATOM 233 CA VAL 29 -3.172 -2.210 -4.271 1.00 0.96 C ATOM 234 C VAL 29 -3.011 -0.867 -4.891 1.00 0.96 C ATOM 235 O VAL 29 -2.249 -0.697 -5.842 1.00 0.96 O ATOM 236 CB VAL 29 -2.011 -2.385 -3.328 1.00 0.96 C ATOM 237 CG1 VAL 29 -0.699 -2.156 -4.095 1.00 0.96 C ATOM 238 CG2 VAL 29 -2.184 -1.397 -2.160 1.00 0.96 C ATOM 239 N GLU 30 -3.771 0.117 -4.384 1.00 0.88 N ATOM 240 CA GLU 30 -3.601 1.472 -4.793 1.00 0.88 C ATOM 241 C GLU 30 -2.974 2.074 -3.588 1.00 0.88 C ATOM 242 O GLU 30 -3.534 1.999 -2.499 1.00 0.88 O ATOM 243 CB GLU 30 -4.936 2.186 -5.056 1.00 0.88 C ATOM 244 CG GLU 30 -4.768 3.638 -5.497 1.00 0.88 C ATOM 245 CD GLU 30 -6.114 4.149 -5.998 1.00 0.88 C ATOM 246 OE1 GLU 30 -7.010 3.297 -6.234 1.00 0.88 O ATOM 247 OE2 GLU 30 -6.260 5.392 -6.159 1.00 0.88 O ATOM 248 N VAL 31 -1.773 2.660 -3.728 1.00 0.96 N ATOM 249 CA VAL 31 -1.155 3.141 -2.536 1.00 0.96 C ATOM 250 C VAL 31 -0.621 4.500 -2.805 1.00 0.96 C ATOM 251 O VAL 31 -0.390 4.886 -3.949 1.00 0.96 O ATOM 252 CB VAL 31 -0.015 2.274 -2.090 1.00 0.96 C ATOM 253 CG1 VAL 31 1.152 2.461 -3.073 1.00 0.96 C ATOM 254 CG2 VAL 31 0.314 2.597 -0.627 1.00 0.96 C ATOM 255 N ARG 32 -0.428 5.280 -1.734 1.00 1.23 N ATOM 256 CA ARG 32 0.057 6.597 -1.948 1.00 1.23 C ATOM 257 C ARG 32 1.250 6.786 -1.086 1.00 1.23 C ATOM 258 O ARG 32 1.364 6.224 0.003 1.00 1.23 O ATOM 259 CB ARG 32 -0.981 7.662 -1.575 1.00 1.23 C ATOM 260 CG ARG 32 -0.500 9.096 -1.784 1.00 1.23 C ATOM 261 CD ARG 32 -1.481 10.150 -1.269 1.00 1.23 C ATOM 262 NE ARG 32 -2.675 10.152 -2.161 1.00 1.23 N ATOM 263 CZ ARG 32 -3.872 10.590 -1.674 1.00 1.23 C ATOM 264 NH1 ARG 32 -3.986 10.925 -0.359 1.00 1.23 N ATOM 265 NH2 ARG 32 -4.946 10.712 -2.514 1.00 1.23 N ATOM 266 N CYS 33 2.197 7.582 -1.593 1.00 1.73 N ATOM 267 CA CYS 33 3.328 7.918 -0.802 1.00 1.73 C ATOM 268 C CYS 33 2.929 9.237 -0.260 1.00 1.73 C ATOM 269 O CYS 33 1.731 9.500 -0.149 1.00 1.73 O ATOM 270 CB CYS 33 4.620 8.081 -1.612 1.00 1.73 C ATOM 271 SG CYS 33 6.097 8.137 -0.560 1.00 1.73 S ATOM 272 N SER 34 3.896 10.114 0.046 1.00 2.04 N ATOM 273 CA SER 34 3.560 11.359 0.666 1.00 2.04 C ATOM 274 C SER 34 2.565 12.089 -0.177 1.00 2.04 C ATOM 275 O SER 34 1.620 12.680 0.344 1.00 2.04 O ATOM 276 CB SER 34 4.790 12.252 0.893 1.00 2.04 C ATOM 277 OG SER 34 5.389 12.618 -0.342 1.00 2.04 O ATOM 278 N ASP 35 2.714 12.068 -1.507 1.00 2.06 N ATOM 279 CA ASP 35 1.693 12.765 -2.223 1.00 2.06 C ATOM 280 C ASP 35 1.466 12.077 -3.530 1.00 2.06 C ATOM 281 O ASP 35 0.613 12.491 -4.310 1.00 2.06 O ATOM 282 CB ASP 35 2.098 14.222 -2.526 1.00 2.06 C ATOM 283 CG ASP 35 0.843 15.025 -2.840 1.00 2.06 C ATOM 284 OD1 ASP 35 -0.271 14.501 -2.571 1.00 2.06 O ATOM 285 OD2 ASP 35 0.974 16.172 -3.346 1.00 2.06 O ATOM 286 N THR 36 2.184 10.972 -3.801 1.00 1.65 N ATOM 287 CA THR 36 2.005 10.432 -5.115 1.00 1.65 C ATOM 288 C THR 36 1.491 9.038 -5.038 1.00 1.65 C ATOM 289 O THR 36 1.919 8.242 -4.203 1.00 1.65 O ATOM 290 CB THR 36 3.256 10.437 -5.942 1.00 1.65 C ATOM 291 OG1 THR 36 4.281 9.697 -5.297 1.00 1.65 O ATOM 292 CG2 THR 36 3.699 11.893 -6.154 1.00 1.65 C ATOM 293 N LYS 37 0.538 8.729 -5.938 1.00 1.49 N ATOM 294 CA LYS 37 -0.104 7.451 -6.000 1.00 1.49 C ATOM 295 C LYS 37 0.783 6.502 -6.740 1.00 1.49 C ATOM 296 O LYS 37 1.386 6.855 -7.753 1.00 1.49 O ATOM 297 CB LYS 37 -1.448 7.507 -6.745 1.00 1.49 C ATOM 298 CG LYS 37 -2.263 6.217 -6.662 1.00 1.49 C ATOM 299 CD LYS 37 -3.701 6.387 -7.149 1.00 1.49 C ATOM 300 CE LYS 37 -3.817 6.566 -8.663 1.00 1.49 C ATOM 301 NZ LYS 37 -3.556 5.277 -9.341 1.00 1.49 N ATOM 302 N TYR 38 0.881 5.257 -6.231 1.00 1.37 N ATOM 303 CA TYR 38 1.645 4.225 -6.875 1.00 1.37 C ATOM 304 C TYR 38 0.781 3.005 -6.876 1.00 1.37 C ATOM 305 O TYR 38 -0.230 2.940 -6.178 1.00 1.37 O ATOM 306 CB TYR 38 2.939 3.815 -6.150 1.00 1.37 C ATOM 307 CG TYR 38 3.902 4.949 -6.160 1.00 1.37 C ATOM 308 CD1 TYR 38 3.845 5.911 -5.183 1.00 1.37 C ATOM 309 CD2 TYR 38 4.861 5.055 -7.142 1.00 1.37 C ATOM 310 CE1 TYR 38 4.736 6.956 -5.180 1.00 1.37 C ATOM 311 CE2 TYR 38 5.755 6.101 -7.142 1.00 1.37 C ATOM 312 CZ TYR 38 5.696 7.061 -6.159 1.00 1.37 C ATOM 313 OH TYR 38 6.609 8.140 -6.145 1.00 1.37 O ATOM 314 N THR 39 1.143 2.006 -7.700 1.00 1.43 N ATOM 315 CA THR 39 0.339 0.822 -7.700 1.00 1.43 C ATOM 316 C THR 39 1.225 -0.369 -7.565 1.00 1.43 C ATOM 317 O THR 39 2.330 -0.402 -8.098 1.00 1.43 O ATOM 318 CB THR 39 -0.436 0.631 -8.967 1.00 1.43 C ATOM 319 OG1 THR 39 -1.319 1.721 -9.171 1.00 1.43 O ATOM 320 CG2 THR 39 -1.222 -0.683 -8.877 1.00 1.43 C ATOM 321 N LEU 40 0.754 -1.374 -6.803 1.00 1.84 N ATOM 322 CA LEU 40 1.459 -2.614 -6.672 1.00 1.84 C ATOM 323 C LEU 40 0.437 -3.656 -6.993 1.00 1.84 C ATOM 324 O LEU 40 -0.550 -3.813 -6.274 1.00 1.84 O ATOM 325 CB LEU 40 1.949 -2.890 -5.238 1.00 1.84 C ATOM 326 CG LEU 40 2.865 -4.126 -5.065 1.00 1.84 C ATOM 327 CD1 LEU 40 2.163 -5.446 -5.432 1.00 1.84 C ATOM 328 CD2 LEU 40 4.208 -3.922 -5.787 1.00 1.84 C ATOM 329 N CYS 41 0.638 -4.417 -8.083 1.00 2.25 N ATOM 330 CA CYS 41 -0.375 -5.389 -8.358 1.00 2.25 C ATOM 331 C CYS 41 0.199 -6.784 -8.146 1.00 2.25 C ATOM 332 O CYS 41 -0.277 -7.469 -7.201 1.00 2.25 O ATOM 333 CB CYS 41 -0.949 -5.296 -9.786 1.00 2.25 C ATOM 334 SG CYS 41 0.300 -5.514 -11.087 1.00 2.25 S TER 335 CYS 41 END