####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS124_3 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS124_3.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 12 - 34 4.83 14.69 LONGEST_CONTINUOUS_SEGMENT: 23 13 - 35 4.93 15.56 LONGEST_CONTINUOUS_SEGMENT: 23 14 - 36 4.91 17.05 LONGEST_CONTINUOUS_SEGMENT: 23 15 - 37 4.73 18.58 LONGEST_CONTINUOUS_SEGMENT: 23 16 - 38 4.92 18.92 LCS_AVERAGE: 51.99 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 1 - 17 1.49 14.74 LCS_AVERAGE: 30.04 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 2 - 16 0.92 15.05 LCS_AVERAGE: 22.78 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 17 20 3 3 11 15 16 17 20 22 24 25 25 26 27 27 27 27 27 28 29 29 LCS_GDT Q 2 Q 2 15 17 20 3 8 14 14 16 17 20 22 24 25 25 26 27 27 27 27 27 28 29 29 LCS_GDT E 3 E 3 15 17 20 3 13 14 15 16 17 20 22 24 25 25 26 27 27 27 27 27 28 29 29 LCS_GDT T 4 T 4 15 17 20 6 13 14 15 16 17 20 22 24 25 25 26 27 27 27 27 27 28 29 29 LCS_GDT R 5 R 5 15 17 20 6 13 14 15 16 17 20 22 24 25 25 26 27 27 27 27 27 28 29 29 LCS_GDT K 6 K 6 15 17 20 10 13 14 15 16 17 20 22 24 25 25 26 27 27 27 27 27 28 29 29 LCS_GDT K 7 K 7 15 17 20 10 13 14 15 16 17 20 22 24 25 25 26 27 27 27 27 27 28 29 29 LCS_GDT C 8 C 8 15 17 20 10 13 14 15 16 17 20 22 24 25 25 26 27 27 27 27 27 28 29 29 LCS_GDT T 9 T 9 15 17 20 10 13 14 15 16 17 20 22 24 25 25 26 27 27 27 27 27 28 29 29 LCS_GDT E 10 E 10 15 17 20 10 13 14 15 16 17 20 22 24 25 25 26 27 27 27 27 27 28 29 29 LCS_GDT M 11 M 11 15 17 20 10 13 14 15 16 17 20 22 24 25 25 26 27 27 27 27 27 28 29 29 LCS_GDT K 12 K 12 15 17 23 10 13 14 15 16 17 20 22 24 25 25 26 27 27 27 27 27 28 29 29 LCS_GDT K 13 K 13 15 17 23 10 13 14 15 16 17 18 18 21 24 25 26 27 27 27 27 27 28 29 29 LCS_GDT K 14 K 14 15 17 23 10 13 14 15 16 17 20 22 24 25 25 26 27 27 27 27 27 28 29 29 LCS_GDT F 15 F 15 15 17 23 10 13 14 15 16 17 20 22 24 25 25 26 27 27 27 27 27 28 29 29 LCS_GDT K 16 K 16 15 17 23 3 7 14 15 16 17 20 22 24 25 25 26 27 27 27 27 27 28 29 29 LCS_GDT N 17 N 17 6 17 23 3 5 8 11 16 17 20 22 24 25 25 26 27 27 27 27 27 28 29 29 LCS_GDT C 18 C 18 5 16 23 3 4 5 8 12 15 17 18 21 25 25 26 27 27 27 27 27 28 29 29 LCS_GDT E 19 E 19 5 9 23 3 4 6 9 13 15 17 18 18 20 20 20 21 22 24 25 25 28 29 29 LCS_GDT V 20 V 20 5 9 23 3 4 7 9 13 15 17 18 18 20 20 20 21 22 24 25 25 26 27 27 LCS_GDT R 21 R 21 5 9 23 3 4 6 9 13 15 17 18 18 20 20 20 21 22 24 25 25 26 27 27 LCS_GDT C 22 C 22 5 9 23 3 4 7 9 13 15 17 18 18 20 20 20 21 22 24 25 25 26 27 27 LCS_GDT D 23 D 23 5 9 23 3 4 7 9 13 15 17 18 18 20 20 20 21 22 24 25 25 26 27 27 LCS_GDT E 24 E 24 5 9 23 3 4 6 8 12 15 17 18 18 20 20 20 21 22 24 25 25 26 27 27 LCS_GDT S 25 S 25 5 9 23 3 4 7 9 13 15 17 18 18 20 20 20 21 22 24 25 25 26 27 27 LCS_GDT N 26 N 26 4 8 23 3 3 4 7 11 14 17 18 18 20 20 20 21 22 24 25 25 26 27 27 LCS_GDT H 27 H 27 7 8 23 3 5 7 9 13 15 17 18 18 20 20 20 21 22 24 25 25 26 27 27 LCS_GDT C 28 C 28 7 8 23 3 6 7 9 13 15 17 18 18 20 20 20 21 22 24 25 25 26 27 27 LCS_GDT V 29 V 29 7 8 23 5 6 7 9 13 15 17 18 18 20 20 20 21 22 24 25 25 26 27 27 LCS_GDT E 30 E 30 7 8 23 5 6 7 9 13 15 17 18 18 20 20 20 21 22 24 25 25 26 27 27 LCS_GDT V 31 V 31 7 8 23 5 6 7 9 13 15 17 18 18 20 20 20 21 22 24 25 25 28 29 29 LCS_GDT R 32 R 32 7 8 23 5 6 7 9 13 15 17 18 18 20 20 20 22 24 27 27 27 28 29 29 LCS_GDT C 33 C 33 7 9 23 5 6 9 11 16 17 18 19 24 25 25 26 27 27 27 27 27 28 29 29 LCS_GDT S 34 S 34 7 9 23 5 6 7 9 13 15 17 20 24 25 25 26 27 27 27 27 27 28 29 29 LCS_GDT D 35 D 35 7 9 23 6 7 7 9 11 12 16 17 18 20 25 26 27 27 27 27 27 28 28 29 LCS_GDT T 36 T 36 7 9 23 6 7 7 9 11 12 17 22 24 25 25 26 27 27 27 27 27 28 29 29 LCS_GDT K 37 K 37 7 9 23 6 7 7 9 11 12 17 22 24 25 25 26 27 27 27 27 27 28 29 29 LCS_GDT Y 38 Y 38 7 9 23 6 7 7 9 12 16 20 22 24 25 25 26 27 27 27 27 27 28 29 29 LCS_GDT T 39 T 39 7 9 11 6 7 7 9 12 16 20 22 24 25 25 26 27 27 27 27 27 28 29 29 LCS_GDT L 40 L 40 7 9 11 6 7 7 9 12 16 20 22 24 25 25 26 27 27 27 27 27 28 29 29 LCS_GDT C 41 C 41 7 9 11 6 7 7 9 12 16 20 22 24 25 25 26 27 27 27 27 27 28 29 29 LCS_AVERAGE LCS_A: 34.94 ( 22.78 30.04 51.99 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 13 14 15 16 17 20 22 24 25 25 26 27 27 27 27 27 28 29 29 GDT PERCENT_AT 24.39 31.71 34.15 36.59 39.02 41.46 48.78 53.66 58.54 60.98 60.98 63.41 65.85 65.85 65.85 65.85 65.85 68.29 70.73 70.73 GDT RMS_LOCAL 0.34 0.53 0.71 1.02 1.15 1.49 2.29 7.23 2.97 3.18 3.08 3.27 3.46 3.46 3.46 3.46 3.46 4.04 4.99 4.61 GDT RMS_ALL_AT 14.65 14.96 15.17 14.84 15.01 14.74 16.55 16.52 16.21 16.11 16.21 16.26 16.18 16.18 16.18 16.18 16.18 15.91 15.38 15.79 # Checking swapping # possible swapping detected: F 15 F 15 # possible swapping detected: D 23 D 23 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 1.540 0 0.032 0.656 5.397 32.727 24.848 5.397 LGA Q 2 Q 2 1.120 0 0.224 0.235 1.607 69.545 65.657 1.607 LGA E 3 E 3 2.363 0 0.120 1.601 8.615 41.364 20.404 8.615 LGA T 4 T 4 3.408 0 0.000 1.131 6.787 22.727 13.766 6.787 LGA R 5 R 5 2.658 0 0.019 1.177 5.876 32.727 20.826 5.876 LGA K 6 K 6 1.264 0 0.075 1.064 7.954 73.636 37.172 7.292 LGA K 7 K 7 1.275 0 0.047 1.102 6.184 73.636 38.990 6.184 LGA C 8 C 8 2.828 0 0.000 0.088 5.121 33.182 23.939 5.121 LGA T 9 T 9 3.630 0 0.047 1.150 4.761 16.818 10.909 4.375 LGA E 10 E 10 2.691 0 0.058 1.079 5.629 35.909 24.242 3.435 LGA M 11 M 11 0.478 0 0.057 1.314 2.479 86.364 63.864 2.357 LGA K 12 K 12 3.360 0 0.081 0.837 7.708 18.182 9.293 7.708 LGA K 13 K 13 4.642 0 0.034 0.622 7.842 7.273 3.232 7.842 LGA K 14 K 14 2.428 0 0.093 1.406 4.223 45.455 31.919 4.223 LGA F 15 F 15 1.213 0 0.429 0.685 4.017 47.727 66.612 0.954 LGA K 16 K 16 3.364 0 0.631 1.076 7.960 23.636 11.111 7.960 LGA N 17 N 17 3.160 0 0.406 1.262 6.866 11.364 23.636 2.543 LGA C 18 C 18 8.055 0 0.072 0.876 10.628 0.000 0.000 8.227 LGA E 19 E 19 15.199 0 0.232 0.630 22.449 0.000 0.000 21.202 LGA V 20 V 20 18.143 0 0.202 1.148 20.978 0.000 0.000 16.063 LGA R 21 R 21 25.082 0 0.040 1.211 35.781 0.000 0.000 35.781 LGA C 22 C 22 27.155 0 0.032 0.180 30.656 0.000 0.000 23.710 LGA D 23 D 23 33.073 0 0.390 0.742 34.558 0.000 0.000 34.558 LGA E 24 E 24 34.559 0 0.094 0.598 37.370 0.000 0.000 37.366 LGA S 25 S 25 40.245 0 0.321 0.298 41.568 0.000 0.000 41.568 LGA N 26 N 26 38.520 0 0.123 1.224 38.977 0.000 0.000 38.977 LGA H 27 H 27 33.126 0 0.506 0.779 34.979 0.000 0.000 33.952 LGA C 28 C 28 29.941 0 0.116 0.138 33.302 0.000 0.000 33.302 LGA V 29 V 29 24.480 0 0.140 0.168 26.243 0.000 0.000 20.675 LGA E 30 E 30 22.216 0 0.083 1.135 25.329 0.000 0.000 25.329 LGA V 31 V 31 15.504 0 0.012 0.085 17.834 0.000 0.000 11.023 LGA R 32 R 32 13.502 0 0.156 1.109 22.021 0.000 0.000 21.482 LGA C 33 C 33 6.802 0 0.542 0.614 9.034 0.000 0.000 5.509 LGA S 34 S 34 6.244 0 0.560 0.632 6.341 0.000 0.000 6.341 LGA D 35 D 35 6.620 0 0.279 0.844 8.786 0.000 0.000 8.786 LGA T 36 T 36 4.208 0 0.054 0.945 5.514 4.091 7.532 5.514 LGA K 37 K 37 4.107 0 0.032 1.467 12.163 8.182 3.838 12.163 LGA Y 38 Y 38 2.340 0 0.054 0.413 5.343 33.182 27.121 5.343 LGA T 39 T 39 1.537 0 0.154 1.049 3.852 62.273 54.286 3.852 LGA L 40 L 40 1.094 0 0.106 0.971 5.298 69.545 42.727 5.298 LGA C 41 C 41 2.018 0 0.558 1.180 3.420 36.364 39.221 1.963 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 10.862 10.806 11.314 21.608 16.223 7.051 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 22 2.59 46.951 44.106 0.818 LGA_LOCAL RMSD: 2.588 Number of atoms: 22 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 16.521 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 10.862 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.366115 * X + 0.800174 * Y + -0.475060 * Z + 7.780015 Y_new = -0.635775 * X + -0.587865 * Y + -0.500205 * Z + 220.221573 Z_new = -0.679522 * X + 0.118898 * Y + 0.723956 * Z + 196.564957 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.093274 0.747111 0.162781 [DEG: -119.9358 42.8063 9.3267 ] ZXZ: -0.759621 0.761276 -1.397576 [DEG: -43.5231 43.6179 -80.0752 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS124_3 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS124_3.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 22 2.59 44.106 10.86 REMARK ---------------------------------------------------------- MOLECULE T0955TS124_3 PFRMAT TS TARGET T0955 MODEL 3 PARENT N/A ATOM 1 N SER 1 -1.704 -13.559 -1.661 1.00 0.95 N ATOM 2 CA SER 1 -0.658 -13.777 -0.637 1.00 0.95 C ATOM 3 CB SER 1 0.742 -13.855 -1.285 1.00 0.95 C ATOM 4 OG SER 1 1.051 -12.658 -1.989 1.00 0.95 O ATOM 5 C SER 1 -0.655 -12.707 0.401 1.00 0.95 C ATOM 6 O SER 1 -0.742 -11.517 0.100 1.00 0.95 O ATOM 7 N GLN 2 -0.578 -13.128 1.675 1.00 1.28 N ATOM 8 CA GLN 2 -0.508 -12.220 2.779 1.00 1.28 C ATOM 9 CB GLN 2 -0.560 -12.941 4.142 1.00 1.28 C ATOM 10 CG GLN 2 -0.797 -12.024 5.350 1.00 1.28 C ATOM 11 CD GLN 2 -0.841 -12.902 6.600 1.00 1.28 C ATOM 12 OE1 GLN 2 -1.876 -13.041 7.252 1.00 1.28 O ATOM 13 NE2 GLN 2 0.323 -13.510 6.932 1.00 1.28 N ATOM 14 C GLN 2 0.811 -11.541 2.648 1.00 1.28 C ATOM 15 O GLN 2 0.964 -10.370 2.989 1.00 1.28 O ATOM 16 N GLU 3 1.811 -12.285 2.139 1.00 2.13 N ATOM 17 CA GLU 3 3.146 -11.783 2.039 1.00 2.13 C ATOM 18 CB GLU 3 4.134 -12.856 1.551 1.00 2.13 C ATOM 19 CG GLU 3 5.576 -12.357 1.522 1.00 2.13 C ATOM 20 CD GLU 3 5.944 -11.930 2.935 1.00 2.13 C ATOM 21 OE1 GLU 3 5.340 -10.949 3.446 1.00 2.13 O ATOM 22 OE2 GLU 3 6.843 -12.587 3.524 1.00 2.13 O ATOM 23 C GLU 3 3.262 -10.596 1.122 1.00 2.13 C ATOM 24 O GLU 3 3.765 -9.550 1.531 1.00 2.13 O ATOM 25 N THR 4 2.792 -10.685 -0.134 1.00 1.22 N ATOM 26 CA THR 4 2.964 -9.532 -0.974 1.00 1.22 C ATOM 27 CB THR 4 2.604 -9.737 -2.416 1.00 1.22 C ATOM 28 OG1 THR 4 3.425 -10.741 -2.998 1.00 1.22 O ATOM 29 CG2 THR 4 2.799 -8.397 -3.151 1.00 1.22 C ATOM 30 C THR 4 2.105 -8.418 -0.471 1.00 1.22 C ATOM 31 O THR 4 2.505 -7.256 -0.508 1.00 1.22 O ATOM 32 N ARG 5 0.895 -8.751 0.007 1.00 1.92 N ATOM 33 CA ARG 5 -0.073 -7.768 0.394 1.00 1.92 C ATOM 34 CB ARG 5 -1.418 -8.385 0.796 1.00 1.92 C ATOM 35 CG ARG 5 -2.485 -7.329 1.050 1.00 1.92 C ATOM 36 CD ARG 5 -3.907 -7.883 1.043 1.00 1.92 C ATOM 37 NE ARG 5 -4.792 -6.728 1.345 1.00 1.92 N ATOM 38 CZ ARG 5 -6.125 -6.908 1.564 1.00 1.92 C ATOM 39 NH1 ARG 5 -6.678 -8.154 1.495 1.00 1.92 N ATOM 40 NH2 ARG 5 -6.893 -5.833 1.905 1.00 1.92 N ATOM 41 C ARG 5 0.404 -6.941 1.542 1.00 1.92 C ATOM 42 O ARG 5 0.231 -5.722 1.547 1.00 1.92 O ATOM 43 N LYS 6 1.027 -7.566 2.551 1.00 1.77 N ATOM 44 CA LYS 6 1.433 -6.820 3.702 1.00 1.77 C ATOM 45 CB LYS 6 1.987 -7.706 4.830 1.00 1.77 C ATOM 46 CG LYS 6 0.903 -8.565 5.490 1.00 1.77 C ATOM 47 CD LYS 6 1.459 -9.702 6.345 1.00 1.77 C ATOM 48 CE LYS 6 1.816 -9.271 7.770 1.00 1.77 C ATOM 49 NZ LYS 6 3.066 -8.475 7.778 1.00 1.77 N ATOM 50 C LYS 6 2.464 -5.813 3.303 1.00 1.77 C ATOM 51 O LYS 6 2.514 -4.721 3.863 1.00 1.77 O ATOM 52 N LYS 7 3.323 -6.152 2.335 1.00 2.37 N ATOM 53 CA LYS 7 4.338 -5.245 1.895 1.00 2.37 C ATOM 54 CB LYS 7 5.215 -5.869 0.796 1.00 2.37 C ATOM 55 CG LYS 7 6.289 -4.912 0.312 1.00 2.37 C ATOM 56 CD LYS 7 7.277 -4.589 1.420 1.00 2.37 C ATOM 57 CE LYS 7 8.076 -3.329 1.126 1.00 2.37 C ATOM 58 NZ LYS 7 8.743 -3.468 -0.184 1.00 2.37 N ATOM 59 C LYS 7 3.695 -4.028 1.314 1.00 2.37 C ATOM 60 O LYS 7 4.125 -2.906 1.577 1.00 2.37 O ATOM 61 N CYS 8 2.639 -4.204 0.504 1.00 1.73 N ATOM 62 CA CYS 8 2.060 -3.057 -0.130 1.00 1.73 C ATOM 63 CB CYS 8 0.899 -3.371 -1.093 1.00 1.73 C ATOM 64 SG CYS 8 0.172 -1.858 -1.811 1.00 1.73 S ATOM 65 C CYS 8 1.502 -2.120 0.885 1.00 1.73 C ATOM 66 O CYS 8 1.746 -0.919 0.821 1.00 1.73 O ATOM 67 N THR 9 0.738 -2.635 1.858 1.00 2.10 N ATOM 68 CA THR 9 0.069 -1.788 2.804 1.00 2.10 C ATOM 69 CB THR 9 -0.942 -2.524 3.624 1.00 2.10 C ATOM 70 OG1 THR 9 -1.565 -1.634 4.538 1.00 2.10 O ATOM 71 CG2 THR 9 -0.257 -3.690 4.356 1.00 2.10 C ATOM 72 C THR 9 1.023 -1.075 3.717 1.00 2.10 C ATOM 73 O THR 9 0.786 0.076 4.078 1.00 2.10 O ATOM 74 N GLU 10 2.116 -1.729 4.140 1.00 2.07 N ATOM 75 CA GLU 10 3.022 -1.092 5.052 1.00 2.07 C ATOM 76 CB GLU 10 4.156 -2.018 5.540 1.00 2.07 C ATOM 77 CG GLU 10 5.214 -2.373 4.488 1.00 2.07 C ATOM 78 CD GLU 10 6.346 -1.352 4.579 1.00 2.07 C ATOM 79 OE1 GLU 10 6.319 -0.540 5.542 1.00 2.07 O ATOM 80 OE2 GLU 10 7.247 -1.378 3.703 1.00 2.07 O ATOM 81 C GLU 10 3.638 0.080 4.365 1.00 2.07 C ATOM 82 O GLU 10 3.860 1.121 4.978 1.00 2.07 O ATOM 83 N MET 11 3.923 -0.055 3.058 1.00 1.83 N ATOM 84 CA MET 11 4.594 1.001 2.359 1.00 1.83 C ATOM 85 CB MET 11 4.936 0.689 0.887 1.00 1.83 C ATOM 86 CG MET 11 6.008 -0.392 0.716 1.00 1.83 C ATOM 87 SD MET 11 6.704 -0.547 -0.962 1.00 1.83 S ATOM 88 CE MET 11 5.185 -1.186 -1.724 1.00 1.83 C ATOM 89 C MET 11 3.738 2.227 2.345 1.00 1.83 C ATOM 90 O MET 11 4.234 3.340 2.501 1.00 1.83 O ATOM 91 N LYS 12 2.420 2.061 2.182 1.00 1.44 N ATOM 92 CA LYS 12 1.528 3.173 2.037 1.00 1.44 C ATOM 93 CB LYS 12 0.060 2.716 1.990 1.00 1.44 C ATOM 94 CG LYS 12 -0.238 1.694 0.891 1.00 1.44 C ATOM 95 CD LYS 12 -1.532 0.912 1.134 1.00 1.44 C ATOM 96 CE LYS 12 -1.719 -0.292 0.207 1.00 1.44 C ATOM 97 NZ LYS 12 -2.733 -1.215 0.771 1.00 1.44 N ATOM 98 C LYS 12 1.644 4.053 3.241 1.00 1.44 C ATOM 99 O LYS 12 1.733 5.271 3.123 1.00 1.44 O ATOM 100 N LYS 13 1.663 3.448 4.438 1.00 1.55 N ATOM 101 CA LYS 13 1.691 4.224 5.645 1.00 1.55 C ATOM 102 CB LYS 13 1.653 3.366 6.922 1.00 1.55 C ATOM 103 CG LYS 13 0.383 2.531 7.113 1.00 1.55 C ATOM 104 CD LYS 13 0.527 1.457 8.195 1.00 1.55 C ATOM 105 CE LYS 13 -0.732 0.614 8.420 1.00 1.55 C ATOM 106 NZ LYS 13 -0.922 -0.345 7.308 1.00 1.55 N ATOM 107 C LYS 13 2.959 5.008 5.712 1.00 1.55 C ATOM 108 O LYS 13 2.960 6.170 6.115 1.00 1.55 O ATOM 109 N LYS 14 4.078 4.360 5.345 1.00 2.24 N ATOM 110 CA LYS 14 5.392 4.924 5.404 1.00 2.24 C ATOM 111 CB LYS 14 6.449 3.883 5.009 1.00 2.24 C ATOM 112 CG LYS 14 7.875 4.404 5.099 1.00 2.24 C ATOM 113 CD LYS 14 8.904 3.313 4.825 1.00 2.24 C ATOM 114 CE LYS 14 9.003 2.972 3.336 1.00 2.24 C ATOM 115 NZ LYS 14 9.691 4.061 2.602 1.00 2.24 N ATOM 116 C LYS 14 5.490 6.074 4.446 1.00 2.24 C ATOM 117 O LYS 14 5.950 7.157 4.805 1.00 2.24 O ATOM 118 N PHE 15 5.009 5.876 3.207 1.00 2.24 N ATOM 119 CA PHE 15 5.133 6.885 2.193 1.00 2.24 C ATOM 120 CB PHE 15 4.575 6.554 0.796 1.00 2.24 C ATOM 121 CG PHE 15 5.480 5.635 0.059 1.00 2.24 C ATOM 122 CD1 PHE 15 6.485 6.129 -0.746 1.00 2.24 C ATOM 123 CD2 PHE 15 5.308 4.281 0.169 1.00 2.24 C ATOM 124 CE1 PHE 15 7.306 5.265 -1.429 1.00 2.24 C ATOM 125 CE2 PHE 15 6.122 3.409 -0.508 1.00 2.24 C ATOM 126 CZ PHE 15 7.127 3.907 -1.302 1.00 2.24 C ATOM 127 C PHE 15 4.370 8.099 2.568 1.00 2.24 C ATOM 128 O PHE 15 4.813 9.201 2.262 1.00 2.24 O ATOM 129 N LYS 16 3.190 7.926 3.187 1.00 2.03 N ATOM 130 CA LYS 16 2.366 9.061 3.448 1.00 2.03 C ATOM 131 CB LYS 16 1.097 8.717 4.231 1.00 2.03 C ATOM 132 CG LYS 16 -0.019 9.729 4.007 1.00 2.03 C ATOM 133 CD LYS 16 -1.356 9.199 4.499 1.00 2.03 C ATOM 134 CE LYS 16 -1.627 9.515 5.966 1.00 2.03 C ATOM 135 NZ LYS 16 -2.929 8.936 6.353 1.00 2.03 N ATOM 136 C LYS 16 3.163 10.049 4.243 1.00 2.03 C ATOM 137 O LYS 16 3.617 9.768 5.347 1.00 2.03 O ATOM 138 N ASN 17 3.333 11.250 3.655 1.00 2.08 N ATOM 139 CA ASN 17 4.085 12.353 4.184 1.00 2.08 C ATOM 140 CB ASN 17 3.429 13.001 5.426 1.00 2.08 C ATOM 141 CG ASN 17 3.883 14.462 5.521 1.00 2.08 C ATOM 142 OD1 ASN 17 3.286 15.340 4.905 1.00 2.08 O ATOM 143 ND2 ASN 17 4.942 14.743 6.324 1.00 2.08 N ATOM 144 C ASN 17 5.496 11.951 4.506 1.00 2.08 C ATOM 145 O ASN 17 5.968 12.118 5.630 1.00 2.08 O ATOM 146 N CYS 18 6.237 11.406 3.522 1.00 1.79 N ATOM 147 CA CYS 18 7.586 11.046 3.849 1.00 1.79 C ATOM 148 CB CYS 18 7.984 9.615 3.452 1.00 1.79 C ATOM 149 SG CYS 18 9.702 9.248 3.926 1.00 1.79 S ATOM 150 C CYS 18 8.536 11.977 3.164 1.00 1.79 C ATOM 151 O CYS 18 8.385 12.318 1.992 1.00 1.79 O ATOM 152 N GLU 19 9.553 12.454 3.900 1.00 1.90 N ATOM 153 CA GLU 19 10.528 13.288 3.265 1.00 1.90 C ATOM 154 CB GLU 19 10.362 14.779 3.610 1.00 1.90 C ATOM 155 CG GLU 19 11.359 15.701 2.902 1.00 1.90 C ATOM 156 CD GLU 19 11.287 17.070 3.575 1.00 1.90 C ATOM 157 OE1 GLU 19 11.342 17.104 4.835 1.00 1.90 O ATOM 158 OE2 GLU 19 11.179 18.095 2.849 1.00 1.90 O ATOM 159 C GLU 19 11.852 12.863 3.800 1.00 1.90 C ATOM 160 O GLU 19 12.041 12.808 5.015 1.00 1.90 O ATOM 161 N VAL 20 12.820 12.541 2.926 1.00 2.09 N ATOM 162 CA VAL 20 14.067 12.140 3.496 1.00 2.09 C ATOM 163 CB VAL 20 14.167 10.668 3.780 1.00 2.09 C ATOM 164 CG1 VAL 20 13.089 10.279 4.807 1.00 2.09 C ATOM 165 CG2 VAL 20 14.092 9.919 2.441 1.00 2.09 C ATOM 166 C VAL 20 15.156 12.451 2.548 1.00 2.09 C ATOM 167 O VAL 20 14.968 12.632 1.346 1.00 2.09 O ATOM 168 N ARG 21 16.367 12.544 3.094 1.00 2.30 N ATOM 169 CA ARG 21 17.444 12.745 2.196 1.00 2.30 C ATOM 170 CB ARG 21 18.130 14.114 2.351 1.00 2.30 C ATOM 171 CG ARG 21 17.157 15.274 2.123 1.00 2.30 C ATOM 172 CD ARG 21 17.814 16.587 1.683 1.00 2.30 C ATOM 173 NE ARG 21 18.785 17.013 2.725 1.00 2.30 N ATOM 174 CZ ARG 21 19.988 17.530 2.338 1.00 2.30 C ATOM 175 NH1 ARG 21 20.267 17.693 1.011 1.00 2.30 N ATOM 176 NH2 ARG 21 20.914 17.885 3.276 1.00 2.30 N ATOM 177 C ARG 21 18.441 11.674 2.499 1.00 2.30 C ATOM 178 O ARG 21 18.924 11.560 3.627 1.00 2.30 O ATOM 179 N CYS 22 18.769 10.838 1.493 1.00 1.29 N ATOM 180 CA CYS 22 19.704 9.773 1.721 1.00 1.29 C ATOM 181 CB CYS 22 19.180 8.395 1.287 1.00 1.29 C ATOM 182 SG CYS 22 17.810 7.766 2.307 1.00 1.29 S ATOM 183 C CYS 22 20.941 10.045 0.926 1.00 1.29 C ATOM 184 O CYS 22 20.891 10.584 -0.178 1.00 1.29 O ATOM 185 N ASP 23 22.104 9.678 1.498 1.00 1.60 N ATOM 186 CA ASP 23 23.360 9.910 0.836 1.00 1.60 C ATOM 187 CB ASP 23 24.215 10.962 1.561 1.00 1.60 C ATOM 188 CG ASP 23 23.483 12.300 1.609 1.00 1.60 C ATOM 189 OD1 ASP 23 22.697 12.605 0.671 1.00 1.60 O ATOM 190 OD2 ASP 23 23.704 13.031 2.609 1.00 1.60 O ATOM 191 C ASP 23 24.166 8.635 0.894 1.00 1.60 C ATOM 192 O ASP 23 25.029 8.477 1.757 1.00 1.60 O ATOM 193 N GLU 24 23.930 7.706 -0.051 1.00 1.91 N ATOM 194 CA GLU 24 24.593 6.428 -0.065 1.00 1.91 C ATOM 195 CB GLU 24 24.112 5.543 -1.221 1.00 1.91 C ATOM 196 CG GLU 24 24.781 4.170 -1.293 1.00 1.91 C ATOM 197 CD GLU 24 24.170 3.449 -2.479 1.00 1.91 C ATOM 198 OE1 GLU 24 23.070 3.875 -2.926 1.00 1.91 O ATOM 199 OE2 GLU 24 24.790 2.461 -2.957 1.00 1.91 O ATOM 200 C GLU 24 26.058 6.609 -0.258 1.00 1.91 C ATOM 201 O GLU 24 26.877 5.993 0.422 1.00 1.91 O ATOM 202 N SER 25 26.439 7.476 -1.203 1.00 2.37 N ATOM 203 CA SER 25 27.828 7.641 -1.473 1.00 2.37 C ATOM 204 CB SER 25 28.442 6.506 -2.313 1.00 2.37 C ATOM 205 OG SER 25 28.499 5.303 -1.560 1.00 2.37 O ATOM 206 C SER 25 27.953 8.860 -2.307 1.00 2.37 C ATOM 207 O SER 25 27.842 9.989 -1.836 1.00 2.37 O ATOM 208 N ASN 26 28.260 8.620 -3.584 1.00 1.86 N ATOM 209 CA ASN 26 28.419 9.649 -4.558 1.00 1.86 C ATOM 210 CB ASN 26 28.957 9.080 -5.885 1.00 1.86 C ATOM 211 CG ASN 26 29.392 10.229 -6.785 1.00 1.86 C ATOM 212 OD1 ASN 26 29.885 11.254 -6.314 1.00 1.86 O ATOM 213 ND2 ASN 26 29.189 10.062 -8.116 1.00 1.86 N ATOM 214 C ASN 26 27.100 10.312 -4.805 1.00 1.86 C ATOM 215 O ASN 26 27.035 11.530 -4.953 1.00 1.86 O ATOM 216 N HIS 27 26.004 9.524 -4.821 1.00 1.89 N ATOM 217 CA HIS 27 24.722 10.061 -5.171 1.00 1.89 C ATOM 218 ND1 HIS 27 21.611 10.253 -5.948 1.00 1.89 N ATOM 219 CG HIS 27 22.599 9.512 -6.551 1.00 1.89 C ATOM 220 CB HIS 27 23.821 8.999 -5.837 1.00 1.89 C ATOM 221 NE2 HIS 27 20.978 9.949 -8.058 1.00 1.89 N ATOM 222 CD2 HIS 27 22.199 9.335 -7.840 1.00 1.89 C ATOM 223 CE1 HIS 27 20.665 10.486 -6.894 1.00 1.89 C ATOM 224 C HIS 27 24.035 10.572 -3.943 1.00 1.89 C ATOM 225 O HIS 27 24.049 9.952 -2.878 1.00 1.89 O ATOM 226 N CYS 28 23.426 11.763 -4.059 1.00 1.23 N ATOM 227 CA CYS 28 22.670 12.277 -2.963 1.00 1.23 C ATOM 228 CB CYS 28 23.024 13.715 -2.559 1.00 1.23 C ATOM 229 SG CYS 28 24.664 13.790 -1.783 1.00 1.23 S ATOM 230 C CYS 28 21.243 12.237 -3.391 1.00 1.23 C ATOM 231 O CYS 28 20.932 12.440 -4.565 1.00 1.23 O ATOM 232 N VAL 29 20.326 11.963 -2.444 1.00 1.36 N ATOM 233 CA VAL 29 18.956 11.798 -2.821 1.00 1.36 C ATOM 234 CB VAL 29 18.463 10.402 -2.574 1.00 1.36 C ATOM 235 CG1 VAL 29 16.976 10.332 -2.962 1.00 1.36 C ATOM 236 CG2 VAL 29 19.360 9.403 -3.320 1.00 1.36 C ATOM 237 C VAL 29 18.087 12.689 -2.003 1.00 1.36 C ATOM 238 O VAL 29 18.360 12.980 -0.837 1.00 1.36 O ATOM 239 N GLU 30 17.005 13.170 -2.642 1.00 2.28 N ATOM 240 CA GLU 30 15.988 13.929 -1.984 1.00 2.28 C ATOM 241 CB GLU 30 15.971 15.427 -2.336 1.00 2.28 C ATOM 242 CG GLU 30 14.705 16.144 -1.854 1.00 2.28 C ATOM 243 CD GLU 30 14.644 16.063 -0.340 1.00 2.28 C ATOM 244 OE1 GLU 30 14.145 15.027 0.185 1.00 2.28 O ATOM 245 OE2 GLU 30 15.097 17.036 0.316 1.00 2.28 O ATOM 246 C GLU 30 14.686 13.383 -2.462 1.00 2.28 C ATOM 247 O GLU 30 14.412 13.310 -3.658 1.00 2.28 O ATOM 248 N VAL 31 13.823 12.965 -1.529 1.00 1.39 N ATOM 249 CA VAL 31 12.580 12.460 -2.003 1.00 1.39 C ATOM 250 CB VAL 31 12.479 10.977 -1.882 1.00 1.39 C ATOM 251 CG1 VAL 31 11.090 10.523 -2.364 1.00 1.39 C ATOM 252 CG2 VAL 31 13.655 10.386 -2.672 1.00 1.39 C ATOM 253 C VAL 31 11.528 13.076 -1.176 1.00 1.39 C ATOM 254 O VAL 31 11.594 13.092 0.051 1.00 1.39 O ATOM 255 N ARG 32 10.521 13.636 -1.854 1.00 2.28 N ATOM 256 CA ARG 32 9.453 14.256 -1.150 1.00 2.28 C ATOM 257 CB ARG 32 9.376 15.767 -1.416 1.00 2.28 C ATOM 258 CG ARG 32 8.324 16.521 -0.600 1.00 2.28 C ATOM 259 CD ARG 32 8.597 18.029 -0.550 1.00 2.28 C ATOM 260 NE ARG 32 7.644 18.748 -1.450 1.00 2.28 N ATOM 261 CZ ARG 32 8.061 19.863 -2.121 1.00 2.28 C ATOM 262 NH1 ARG 32 9.381 20.209 -2.126 1.00 2.28 N ATOM 263 NH2 ARG 32 7.169 20.665 -2.772 1.00 2.28 N ATOM 264 C ARG 32 8.217 13.663 -1.713 1.00 2.28 C ATOM 265 O ARG 32 7.898 13.861 -2.884 1.00 2.28 O ATOM 266 N CYS 33 7.479 12.897 -0.900 1.00 1.35 N ATOM 267 CA CYS 33 6.275 12.339 -1.418 1.00 1.35 C ATOM 268 CB CYS 33 6.334 10.813 -1.610 1.00 1.35 C ATOM 269 SG CYS 33 7.549 10.309 -2.870 1.00 1.35 S ATOM 270 C CYS 33 5.203 12.648 -0.436 1.00 1.35 C ATOM 271 O CYS 33 5.151 12.100 0.664 1.00 1.35 O ATOM 272 N SER 34 4.322 13.570 -0.838 1.00 1.85 N ATOM 273 CA SER 34 3.234 13.960 -0.008 1.00 1.85 C ATOM 274 CB SER 34 3.147 15.480 0.187 1.00 1.85 C ATOM 275 OG SER 34 4.314 15.950 0.841 1.00 1.85 O ATOM 276 C SER 34 2.016 13.581 -0.769 1.00 1.85 C ATOM 277 O SER 34 1.867 13.945 -1.936 1.00 1.85 O ATOM 278 N ASP 35 1.102 12.854 -0.104 1.00 1.47 N ATOM 279 CA ASP 35 -0.105 12.397 -0.724 1.00 1.47 C ATOM 280 CB ASP 35 -1.010 13.526 -1.251 1.00 1.47 C ATOM 281 CG ASP 35 -1.725 14.178 -0.076 1.00 1.47 C ATOM 282 OD1 ASP 35 -1.376 13.857 1.091 1.00 1.47 O ATOM 283 OD2 ASP 35 -2.642 15.003 -0.337 1.00 1.47 O ATOM 284 C ASP 35 0.243 11.514 -1.880 1.00 1.47 C ATOM 285 O ASP 35 -0.538 11.382 -2.821 1.00 1.47 O ATOM 286 N THR 36 1.406 10.845 -1.833 1.00 2.01 N ATOM 287 CA THR 36 1.775 9.974 -2.909 1.00 2.01 C ATOM 288 CB THR 36 3.251 9.864 -3.108 1.00 2.01 C ATOM 289 OG1 THR 36 3.883 9.512 -1.881 1.00 2.01 O ATOM 290 CG2 THR 36 3.779 11.200 -3.648 1.00 2.01 C ATOM 291 C THR 36 1.296 8.606 -2.573 1.00 2.01 C ATOM 292 O THR 36 1.805 7.958 -1.661 1.00 2.01 O ATOM 293 N LYS 37 0.286 8.136 -3.319 1.00 2.14 N ATOM 294 CA LYS 37 -0.264 6.836 -3.089 1.00 2.14 C ATOM 295 CB LYS 37 -1.770 6.851 -2.790 1.00 2.14 C ATOM 296 CG LYS 37 -2.081 7.054 -1.311 1.00 2.14 C ATOM 297 CD LYS 37 -1.478 5.937 -0.453 1.00 2.14 C ATOM 298 CE LYS 37 -1.611 6.146 1.054 1.00 2.14 C ATOM 299 NZ LYS 37 -2.746 5.353 1.570 1.00 2.14 N ATOM 300 C LYS 37 -0.097 6.031 -4.333 1.00 2.14 C ATOM 301 O LYS 37 -0.614 6.393 -5.387 1.00 2.14 O ATOM 302 N TYR 38 0.617 4.897 -4.242 1.00 2.13 N ATOM 303 CA TYR 38 0.772 4.143 -5.446 1.00 2.13 C ATOM 304 CB TYR 38 2.166 4.266 -6.084 1.00 2.13 C ATOM 305 CG TYR 38 3.212 3.524 -5.318 1.00 2.13 C ATOM 306 CD1 TYR 38 3.693 3.991 -4.114 1.00 2.13 C ATOM 307 CD2 TYR 38 3.703 2.345 -5.827 1.00 2.13 C ATOM 308 CE1 TYR 38 4.665 3.288 -3.437 1.00 2.13 C ATOM 309 CE2 TYR 38 4.677 1.641 -5.153 1.00 2.13 C ATOM 310 CZ TYR 38 5.159 2.119 -3.962 1.00 2.13 C ATOM 311 OH TYR 38 6.159 1.407 -3.264 1.00 2.13 O ATOM 312 C TYR 38 0.510 2.711 -5.146 1.00 2.13 C ATOM 313 O TYR 38 0.566 2.280 -3.998 1.00 2.13 O ATOM 314 N THR 39 0.165 1.931 -6.179 1.00 2.04 N ATOM 315 CA THR 39 -0.053 0.556 -5.869 1.00 2.04 C ATOM 316 CB THR 39 -1.484 0.106 -5.988 1.00 2.04 C ATOM 317 OG1 THR 39 -1.613 -1.220 -5.495 1.00 2.04 O ATOM 318 CG2 THR 39 -1.947 0.195 -7.452 1.00 2.04 C ATOM 319 C THR 39 0.806 -0.286 -6.750 1.00 2.04 C ATOM 320 O THR 39 0.958 -0.013 -7.940 1.00 2.04 O ATOM 321 N LEU 40 1.421 -1.325 -6.163 1.00 2.23 N ATOM 322 CA LEU 40 2.205 -2.225 -6.950 1.00 2.23 C ATOM 323 CB LEU 40 3.407 -2.831 -6.209 1.00 2.23 C ATOM 324 CG LEU 40 4.124 -3.904 -7.052 1.00 2.23 C ATOM 325 CD1 LEU 40 4.723 -3.293 -8.325 1.00 2.23 C ATOM 326 CD2 LEU 40 5.150 -4.701 -6.232 1.00 2.23 C ATOM 327 C LEU 40 1.315 -3.371 -7.248 1.00 2.23 C ATOM 328 O LEU 40 0.796 -4.008 -6.336 1.00 2.23 O ATOM 329 N CYS 41 1.095 -3.654 -8.538 1.00 0.93 N ATOM 330 CA CYS 41 0.296 -4.788 -8.855 1.00 0.93 C ATOM 331 CB CYS 41 -0.090 -4.839 -10.342 1.00 0.93 C ATOM 332 SG CYS 41 -1.247 -3.516 -10.825 1.00 0.93 S ATOM 333 C CYS 41 1.191 -5.981 -8.537 1.00 0.93 C ATOM 334 O CYS 41 2.063 -6.329 -9.380 1.00 0.93 O ATOM 335 OXT CYS 41 1.021 -6.551 -7.427 1.00 0.93 O TER 336 CYS 41 END