####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS124_2 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS124_2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 4.15 4.15 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 1 - 20 1.79 5.58 LONGEST_CONTINUOUS_SEGMENT: 20 17 - 36 1.96 6.69 LCS_AVERAGE: 46.70 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 2 - 15 0.86 6.84 LONGEST_CONTINUOUS_SEGMENT: 14 3 - 16 0.95 6.36 LCS_AVERAGE: 22.07 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 20 41 3 3 3 7 11 23 25 26 29 32 35 37 39 41 41 41 41 41 41 41 LCS_GDT Q 2 Q 2 14 20 41 5 9 13 20 21 23 25 26 29 32 32 36 39 41 41 41 41 41 41 41 LCS_GDT E 3 E 3 14 20 41 5 12 13 20 21 23 25 26 29 32 32 37 39 41 41 41 41 41 41 41 LCS_GDT T 4 T 4 14 20 41 5 12 14 20 21 23 25 26 29 32 35 37 39 41 41 41 41 41 41 41 LCS_GDT R 5 R 5 14 20 41 6 12 16 20 21 23 25 26 29 32 35 37 39 41 41 41 41 41 41 41 LCS_GDT K 6 K 6 14 20 41 9 12 16 20 21 23 25 26 29 32 35 37 39 41 41 41 41 41 41 41 LCS_GDT K 7 K 7 14 20 41 9 12 16 20 21 23 25 26 29 32 35 37 39 41 41 41 41 41 41 41 LCS_GDT C 8 C 8 14 20 41 9 12 16 20 21 23 25 28 30 33 35 37 39 41 41 41 41 41 41 41 LCS_GDT T 9 T 9 14 20 41 9 12 16 20 21 23 25 28 31 33 35 37 39 41 41 41 41 41 41 41 LCS_GDT E 10 E 10 14 20 41 9 12 16 20 21 23 25 28 30 33 35 37 39 41 41 41 41 41 41 41 LCS_GDT M 11 M 11 14 20 41 9 12 16 20 21 23 25 28 31 33 35 37 39 41 41 41 41 41 41 41 LCS_GDT K 12 K 12 14 20 41 9 12 16 20 21 23 25 28 31 33 35 37 39 41 41 41 41 41 41 41 LCS_GDT K 13 K 13 14 20 41 9 12 16 20 21 23 25 28 31 33 35 37 39 41 41 41 41 41 41 41 LCS_GDT K 14 K 14 14 20 41 9 12 16 20 21 23 25 28 31 33 35 37 39 41 41 41 41 41 41 41 LCS_GDT F 15 F 15 14 20 41 5 11 16 20 21 23 25 28 31 33 35 37 39 41 41 41 41 41 41 41 LCS_GDT K 16 K 16 14 20 41 3 4 12 20 21 23 25 28 31 33 35 37 39 41 41 41 41 41 41 41 LCS_GDT N 17 N 17 6 20 41 5 8 16 20 21 23 25 28 31 33 35 37 39 41 41 41 41 41 41 41 LCS_GDT C 18 C 18 6 20 41 5 10 16 20 21 23 25 28 31 33 35 37 39 41 41 41 41 41 41 41 LCS_GDT E 19 E 19 6 20 41 5 10 16 20 21 23 25 28 31 33 35 37 39 41 41 41 41 41 41 41 LCS_GDT V 20 V 20 6 20 41 5 10 13 16 19 22 25 28 31 33 35 37 39 41 41 41 41 41 41 41 LCS_GDT R 21 R 21 6 20 41 5 10 13 16 19 22 24 28 31 33 35 37 39 41 41 41 41 41 41 41 LCS_GDT C 22 C 22 6 20 41 5 8 13 16 19 22 24 28 31 33 35 37 39 41 41 41 41 41 41 41 LCS_GDT D 23 D 23 6 20 41 5 8 13 16 18 22 24 28 31 33 34 37 39 41 41 41 41 41 41 41 LCS_GDT E 24 E 24 6 20 41 3 6 12 16 18 22 24 28 31 33 35 37 39 41 41 41 41 41 41 41 LCS_GDT S 25 S 25 6 20 41 3 6 12 16 18 22 24 28 31 33 35 37 39 41 41 41 41 41 41 41 LCS_GDT N 26 N 26 6 20 41 3 4 9 15 17 18 24 28 31 33 35 37 39 41 41 41 41 41 41 41 LCS_GDT H 27 H 27 7 20 41 3 8 13 16 19 22 24 28 31 33 35 37 39 41 41 41 41 41 41 41 LCS_GDT C 28 C 28 7 20 41 6 10 13 16 17 21 24 27 31 33 35 37 39 41 41 41 41 41 41 41 LCS_GDT V 29 V 29 7 20 41 6 10 13 16 19 22 24 28 31 33 35 37 39 41 41 41 41 41 41 41 LCS_GDT E 30 E 30 7 20 41 6 10 13 16 19 22 24 28 31 33 35 37 39 41 41 41 41 41 41 41 LCS_GDT V 31 V 31 7 20 41 6 10 13 16 21 23 25 28 31 33 35 37 39 41 41 41 41 41 41 41 LCS_GDT R 32 R 32 7 20 41 6 10 16 20 21 23 25 28 31 33 35 37 39 41 41 41 41 41 41 41 LCS_GDT C 33 C 33 7 20 41 6 10 13 20 21 23 25 28 31 33 35 37 39 41 41 41 41 41 41 41 LCS_GDT S 34 S 34 7 20 41 4 8 11 15 19 22 24 28 31 33 35 37 39 41 41 41 41 41 41 41 LCS_GDT D 35 D 35 6 20 41 4 5 8 12 19 22 24 25 28 32 34 37 39 41 41 41 41 41 41 41 LCS_GDT T 36 T 36 6 20 41 4 6 8 13 19 22 24 28 31 33 35 37 39 41 41 41 41 41 41 41 LCS_GDT K 37 K 37 6 13 41 4 6 8 12 19 22 24 28 31 33 35 37 39 41 41 41 41 41 41 41 LCS_GDT Y 38 Y 38 6 13 41 4 6 8 12 21 23 24 28 31 33 35 37 39 41 41 41 41 41 41 41 LCS_GDT T 39 T 39 6 13 41 4 8 16 20 21 23 25 28 31 33 35 37 39 41 41 41 41 41 41 41 LCS_GDT L 40 L 40 6 13 41 4 6 6 13 19 22 25 28 31 33 35 37 39 41 41 41 41 41 41 41 LCS_GDT C 41 C 41 6 13 41 3 6 6 11 19 22 24 28 31 33 35 37 39 41 41 41 41 41 41 41 LCS_AVERAGE LCS_A: 56.26 ( 22.07 46.70 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 12 16 20 21 23 25 28 31 33 35 37 39 41 41 41 41 41 41 41 GDT PERCENT_AT 21.95 29.27 39.02 48.78 51.22 56.10 60.98 68.29 75.61 80.49 85.37 90.24 95.12 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.26 0.65 1.04 1.35 1.42 1.73 2.02 2.88 3.12 3.31 3.60 3.74 3.95 4.15 4.15 4.15 4.15 4.15 4.15 4.15 GDT RMS_ALL_AT 7.23 7.03 5.64 5.58 5.63 5.39 5.31 5.16 4.90 4.64 4.17 4.34 4.20 4.15 4.15 4.15 4.15 4.15 4.15 4.15 # Checking swapping # possible swapping detected: E 3 E 3 # possible swapping detected: E 10 E 10 # possible swapping detected: F 15 F 15 # possible swapping detected: E 19 E 19 # possible swapping detected: D 35 D 35 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 9.957 0 0.409 0.603 12.714 0.000 0.000 12.714 LGA Q 2 Q 2 12.105 0 0.243 0.867 15.806 0.000 0.000 15.806 LGA E 3 E 3 10.489 0 0.090 0.850 13.348 0.000 0.000 13.348 LGA T 4 T 4 9.334 0 0.034 1.158 11.044 0.000 0.000 11.044 LGA R 5 R 5 8.988 0 0.054 1.615 18.515 0.000 0.000 18.515 LGA K 6 K 6 8.940 0 0.038 0.906 9.825 0.000 0.000 9.353 LGA K 7 K 7 7.789 0 0.012 0.660 8.325 0.000 0.000 7.099 LGA C 8 C 8 6.666 0 0.045 0.076 7.144 0.000 0.000 6.409 LGA T 9 T 9 6.116 0 0.050 1.072 9.122 0.000 0.000 9.122 LGA E 10 E 10 6.393 0 0.050 0.349 9.415 0.000 0.000 7.257 LGA M 11 M 11 5.038 0 0.069 0.633 5.583 1.818 1.136 5.063 LGA K 12 K 12 3.921 0 0.077 0.985 5.136 9.545 6.263 5.136 LGA K 13 K 13 4.291 0 0.065 1.030 11.684 5.455 2.424 11.684 LGA K 14 K 14 4.457 0 0.063 0.624 7.148 8.182 3.838 7.148 LGA F 15 F 15 3.106 0 0.441 0.355 5.089 10.000 33.719 1.892 LGA K 16 K 16 3.530 0 0.538 1.271 9.042 29.545 13.333 9.042 LGA N 17 N 17 1.656 0 0.591 1.031 7.955 61.818 32.273 6.880 LGA C 18 C 18 2.001 0 0.083 0.907 5.289 47.727 38.182 5.289 LGA E 19 E 19 2.314 0 0.200 0.699 4.073 48.182 42.626 4.073 LGA V 20 V 20 2.398 0 0.108 1.125 4.348 38.182 30.649 2.092 LGA R 21 R 21 2.171 0 0.077 1.293 4.916 38.182 19.339 4.485 LGA C 22 C 22 2.864 0 0.108 0.913 6.842 30.000 23.030 6.842 LGA D 23 D 23 3.365 0 0.611 0.639 4.998 14.091 9.773 4.394 LGA E 24 E 24 0.996 0 0.331 0.763 4.265 62.727 47.677 4.265 LGA S 25 S 25 1.253 0 0.617 0.849 3.169 65.909 55.455 3.169 LGA N 26 N 26 3.313 0 0.197 1.172 8.645 28.182 14.318 8.645 LGA H 27 H 27 1.948 0 0.129 0.267 3.572 31.818 40.727 2.172 LGA C 28 C 28 4.017 0 0.052 0.776 5.939 17.273 11.818 5.939 LGA V 29 V 29 3.299 0 0.114 1.081 4.886 13.182 12.987 4.886 LGA E 30 E 30 2.586 0 0.070 0.178 3.199 35.909 32.525 2.415 LGA V 31 V 31 2.049 0 0.056 0.123 3.063 44.545 35.844 2.589 LGA R 32 R 32 1.421 0 0.246 1.492 6.257 48.636 37.190 6.257 LGA C 33 C 33 1.831 0 0.511 0.903 2.460 51.364 54.242 0.564 LGA S 34 S 34 3.411 0 0.542 0.594 7.308 11.364 12.424 3.356 LGA D 35 D 35 5.457 0 0.125 1.205 7.017 1.364 0.682 7.017 LGA T 36 T 36 3.380 0 0.272 1.017 4.753 26.818 18.961 4.068 LGA K 37 K 37 3.523 0 0.140 1.195 8.579 6.818 3.636 8.579 LGA Y 38 Y 38 3.662 0 0.037 1.322 6.665 26.818 15.606 6.665 LGA T 39 T 39 3.464 0 0.083 1.119 7.774 13.182 7.532 5.639 LGA L 40 L 40 2.080 0 0.128 0.993 4.615 44.545 30.682 4.615 LGA C 41 C 41 2.322 0 0.144 0.820 5.006 24.545 19.481 3.661 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 4.155 4.184 4.862 21.896 17.277 8.603 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 28 2.88 61.585 60.049 0.938 LGA_LOCAL RMSD: 2.884 Number of atoms: 28 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 5.159 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 4.155 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.655436 * X + -0.633740 * Y + 0.410826 * Z + -141.518158 Y_new = -0.699590 * X + -0.714405 * Y + 0.014092 * Z + 278.872986 Z_new = 0.284565 * X + -0.296646 * Y + -0.911605 * Z + -17.084663 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.817972 -0.288553 -2.826989 [DEG: -46.8664 -16.5329 -161.9746 ] ZXZ: 1.605085 2.717968 2.376977 [DEG: 91.9646 155.7281 136.1908 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS124_2 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS124_2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 28 2.88 60.049 4.15 REMARK ---------------------------------------------------------- MOLECULE T0955TS124_2 PFRMAT TS TARGET T0955 MODEL 2 PARENT N/A ATOM 1 N SER 1 8.923 -11.493 1.199 1.00 0.75 N ATOM 2 CA SER 1 8.452 -11.538 2.603 1.00 0.75 C ATOM 3 CB SER 1 8.835 -12.883 3.254 1.00 0.75 C ATOM 4 OG SER 1 10.237 -13.099 3.192 1.00 0.75 O ATOM 5 C SER 1 9.012 -10.403 3.394 1.00 0.75 C ATOM 6 O SER 1 8.571 -9.265 3.248 1.00 0.75 O ATOM 7 N GLN 2 10.008 -10.677 4.254 1.00 1.61 N ATOM 8 CA GLN 2 10.573 -9.624 5.038 1.00 1.61 C ATOM 9 CB GLN 2 11.687 -10.092 5.988 1.00 1.61 C ATOM 10 CG GLN 2 11.217 -11.085 7.053 1.00 1.61 C ATOM 11 CD GLN 2 12.420 -11.441 7.914 1.00 1.61 C ATOM 12 OE1 GLN 2 12.699 -10.777 8.911 1.00 1.61 O ATOM 13 NE2 GLN 2 13.160 -12.510 7.517 1.00 1.61 N ATOM 14 C GLN 2 11.190 -8.660 4.083 1.00 1.61 C ATOM 15 O GLN 2 11.113 -7.448 4.269 1.00 1.61 O ATOM 16 N GLU 3 11.827 -9.199 3.031 1.00 1.71 N ATOM 17 CA GLU 3 12.494 -8.421 2.034 1.00 1.71 C ATOM 18 CB GLU 3 13.179 -9.336 1.008 1.00 1.71 C ATOM 19 CG GLU 3 12.174 -10.274 0.329 1.00 1.71 C ATOM 20 CD GLU 3 12.933 -11.382 -0.387 1.00 1.71 C ATOM 21 OE1 GLU 3 14.157 -11.532 -0.131 1.00 1.71 O ATOM 22 OE2 GLU 3 12.289 -12.104 -1.195 1.00 1.71 O ATOM 23 C GLU 3 11.490 -7.584 1.305 1.00 1.71 C ATOM 24 O GLU 3 11.719 -6.401 1.062 1.00 1.71 O ATOM 25 N THR 4 10.346 -8.185 0.932 1.00 1.04 N ATOM 26 CA THR 4 9.346 -7.478 0.185 1.00 1.04 C ATOM 27 CB THR 4 8.233 -8.373 -0.281 1.00 1.04 C ATOM 28 OG1 THR 4 8.759 -9.450 -1.043 1.00 1.04 O ATOM 29 CG2 THR 4 7.264 -7.546 -1.148 1.00 1.04 C ATOM 30 C THR 4 8.733 -6.425 1.053 1.00 1.04 C ATOM 31 O THR 4 8.500 -5.301 0.614 1.00 1.04 O ATOM 32 N ARG 5 8.468 -6.774 2.325 1.00 1.86 N ATOM 33 CA ARG 5 7.794 -5.907 3.247 1.00 1.86 C ATOM 34 CB ARG 5 7.537 -6.554 4.618 1.00 1.86 C ATOM 35 CG ARG 5 6.672 -5.675 5.525 1.00 1.86 C ATOM 36 CD ARG 5 6.429 -6.250 6.922 1.00 1.86 C ATOM 37 NE ARG 5 7.455 -5.671 7.835 1.00 1.86 N ATOM 38 CZ ARG 5 8.661 -6.290 8.003 1.00 1.86 C ATOM 39 NH1 ARG 5 8.938 -7.444 7.330 1.00 1.86 N ATOM 40 NH2 ARG 5 9.589 -5.755 8.846 1.00 1.86 N ATOM 41 C ARG 5 8.620 -4.695 3.505 1.00 1.86 C ATOM 42 O ARG 5 8.084 -3.598 3.642 1.00 1.86 O ATOM 43 N LYS 6 9.951 -4.857 3.585 1.00 1.64 N ATOM 44 CA LYS 6 10.803 -3.765 3.950 1.00 1.64 C ATOM 45 CB LYS 6 12.292 -4.136 4.015 1.00 1.64 C ATOM 46 CG LYS 6 12.663 -5.051 5.180 1.00 1.64 C ATOM 47 CD LYS 6 14.107 -5.548 5.101 1.00 1.64 C ATOM 48 CE LYS 6 15.115 -4.428 4.828 1.00 1.64 C ATOM 49 NZ LYS 6 16.487 -4.984 4.743 1.00 1.64 N ATOM 50 C LYS 6 10.703 -2.654 2.959 1.00 1.64 C ATOM 51 O LYS 6 10.656 -1.489 3.343 1.00 1.64 O ATOM 52 N LYS 7 10.683 -2.972 1.656 1.00 1.94 N ATOM 53 CA LYS 7 10.686 -1.930 0.675 1.00 1.94 C ATOM 54 CB LYS 7 10.865 -2.453 -0.764 1.00 1.94 C ATOM 55 CG LYS 7 11.214 -1.335 -1.753 1.00 1.94 C ATOM 56 CD LYS 7 11.821 -1.828 -3.069 1.00 1.94 C ATOM 57 CE LYS 7 10.856 -2.636 -3.937 1.00 1.94 C ATOM 58 NZ LYS 7 11.592 -3.233 -5.073 1.00 1.94 N ATOM 59 C LYS 7 9.420 -1.128 0.748 1.00 1.94 C ATOM 60 O LYS 7 9.449 0.090 0.599 1.00 1.94 O ATOM 61 N CYS 8 8.269 -1.789 0.969 1.00 1.68 N ATOM 62 CA CYS 8 6.993 -1.131 0.994 1.00 1.68 C ATOM 63 CB CYS 8 5.827 -2.118 1.167 1.00 1.68 C ATOM 64 SG CYS 8 4.208 -1.292 1.170 1.00 1.68 S ATOM 65 C CYS 8 6.925 -0.158 2.131 1.00 1.68 C ATOM 66 O CYS 8 6.438 0.957 1.969 1.00 1.68 O ATOM 67 N THR 9 7.407 -0.563 3.317 1.00 1.99 N ATOM 68 CA THR 9 7.336 0.252 4.497 1.00 1.99 C ATOM 69 CB THR 9 7.829 -0.460 5.725 1.00 1.99 C ATOM 70 OG1 THR 9 9.201 -0.800 5.575 1.00 1.99 O ATOM 71 CG2 THR 9 6.989 -1.729 5.943 1.00 1.99 C ATOM 72 C THR 9 8.184 1.473 4.331 1.00 1.99 C ATOM 73 O THR 9 7.771 2.574 4.684 1.00 1.99 O ATOM 74 N GLU 10 9.393 1.313 3.772 1.00 1.61 N ATOM 75 CA GLU 10 10.290 2.419 3.631 1.00 1.61 C ATOM 76 CB GLU 10 11.605 2.027 2.941 1.00 1.61 C ATOM 77 CG GLU 10 12.577 3.194 2.785 1.00 1.61 C ATOM 78 CD GLU 10 13.822 2.675 2.085 1.00 1.61 C ATOM 79 OE1 GLU 10 13.705 2.278 0.895 1.00 1.61 O ATOM 80 OE2 GLU 10 14.906 2.672 2.728 1.00 1.61 O ATOM 81 C GLU 10 9.614 3.423 2.765 1.00 1.61 C ATOM 82 O GLU 10 9.702 4.625 2.997 1.00 1.61 O ATOM 83 N MET 11 8.916 2.943 1.729 1.00 1.97 N ATOM 84 CA MET 11 8.216 3.809 0.840 1.00 1.97 C ATOM 85 CB MET 11 7.530 3.034 -0.299 1.00 1.97 C ATOM 86 CG MET 11 8.526 2.255 -1.159 1.00 1.97 C ATOM 87 SD MET 11 9.741 3.303 -2.011 1.00 1.97 S ATOM 88 CE MET 11 10.752 1.937 -2.651 1.00 1.97 C ATOM 89 C MET 11 7.138 4.493 1.622 1.00 1.97 C ATOM 90 O MET 11 6.900 5.686 1.458 1.00 1.97 O ATOM 91 N LYS 12 6.469 3.741 2.514 1.00 2.07 N ATOM 92 CA LYS 12 5.330 4.208 3.256 1.00 2.07 C ATOM 93 CB LYS 12 4.784 3.130 4.209 1.00 2.07 C ATOM 94 CG LYS 12 3.516 3.531 4.964 1.00 2.07 C ATOM 95 CD LYS 12 2.887 2.368 5.732 1.00 2.07 C ATOM 96 CE LYS 12 2.520 1.172 4.849 1.00 2.07 C ATOM 97 NZ LYS 12 2.016 0.061 5.691 1.00 2.07 N ATOM 98 C LYS 12 5.688 5.387 4.103 1.00 2.07 C ATOM 99 O LYS 12 4.954 6.370 4.146 1.00 2.07 O ATOM 100 N LYS 13 6.823 5.329 4.817 1.00 1.78 N ATOM 101 CA LYS 13 7.154 6.407 5.698 1.00 1.78 C ATOM 102 CB LYS 13 8.367 6.124 6.600 1.00 1.78 C ATOM 103 CG LYS 13 9.708 6.111 5.870 1.00 1.78 C ATOM 104 CD LYS 13 10.901 6.217 6.820 1.00 1.78 C ATOM 105 CE LYS 13 12.249 6.307 6.102 1.00 1.78 C ATOM 106 NZ LYS 13 13.313 6.633 7.081 1.00 1.78 N ATOM 107 C LYS 13 7.453 7.640 4.904 1.00 1.78 C ATOM 108 O LYS 13 7.101 8.747 5.304 1.00 1.78 O ATOM 109 N LYS 14 8.116 7.482 3.747 1.00 1.11 N ATOM 110 CA LYS 14 8.496 8.607 2.944 1.00 1.11 C ATOM 111 CB LYS 14 9.261 8.210 1.670 1.00 1.11 C ATOM 112 CG LYS 14 10.642 7.600 1.933 1.00 1.11 C ATOM 113 CD LYS 14 11.252 6.940 0.694 1.00 1.11 C ATOM 114 CE LYS 14 12.593 6.249 0.952 1.00 1.11 C ATOM 115 NZ LYS 14 13.084 5.628 -0.302 1.00 1.11 N ATOM 116 C LYS 14 7.265 9.326 2.499 1.00 1.11 C ATOM 117 O LYS 14 7.228 10.555 2.462 1.00 1.11 O ATOM 118 N PHE 15 6.208 8.579 2.152 1.00 2.12 N ATOM 119 CA PHE 15 5.037 9.218 1.630 1.00 2.12 C ATOM 120 CB PHE 15 3.877 8.273 1.282 1.00 2.12 C ATOM 121 CG PHE 15 4.377 7.188 0.406 1.00 2.12 C ATOM 122 CD1 PHE 15 5.018 7.481 -0.771 1.00 2.12 C ATOM 123 CD2 PHE 15 4.244 5.878 0.804 1.00 2.12 C ATOM 124 CE1 PHE 15 5.487 6.468 -1.567 1.00 2.12 C ATOM 125 CE2 PHE 15 4.703 4.859 0.009 1.00 2.12 C ATOM 126 CZ PHE 15 5.328 5.156 -1.178 1.00 2.12 C ATOM 127 C PHE 15 4.460 10.087 2.682 1.00 2.12 C ATOM 128 O PHE 15 3.996 11.182 2.375 1.00 2.12 O ATOM 129 N LYS 16 4.443 9.577 3.933 1.00 2.37 N ATOM 130 CA LYS 16 3.844 10.205 5.075 1.00 2.37 C ATOM 131 CB LYS 16 3.651 11.733 4.998 1.00 2.37 C ATOM 132 CG LYS 16 3.073 12.386 6.252 1.00 2.37 C ATOM 133 CD LYS 16 3.089 13.912 6.156 1.00 2.37 C ATOM 134 CE LYS 16 2.195 14.436 5.031 1.00 2.37 C ATOM 135 NZ LYS 16 2.381 15.897 4.873 1.00 2.37 N ATOM 136 C LYS 16 2.506 9.563 5.170 1.00 2.37 C ATOM 137 O LYS 16 2.393 8.344 5.296 1.00 2.37 O ATOM 138 N ASN 17 1.440 10.375 5.109 1.00 1.83 N ATOM 139 CA ASN 17 0.144 9.782 5.164 1.00 1.83 C ATOM 140 CB ASN 17 -0.977 10.786 5.477 1.00 1.83 C ATOM 141 CG ASN 17 -2.282 10.015 5.599 1.00 1.83 C ATOM 142 OD1 ASN 17 -2.285 8.786 5.657 1.00 1.83 O ATOM 143 ND2 ASN 17 -3.422 10.754 5.641 1.00 1.83 N ATOM 144 C ASN 17 -0.143 9.214 3.817 1.00 1.83 C ATOM 145 O ASN 17 -0.467 9.926 2.867 1.00 1.83 O ATOM 146 N CYS 18 -0.006 7.886 3.699 1.00 1.76 N ATOM 147 CA CYS 18 -0.327 7.249 2.461 1.00 1.76 C ATOM 148 CB CYS 18 0.856 6.500 1.827 1.00 1.76 C ATOM 149 SG CYS 18 1.448 5.136 2.872 1.00 1.76 S ATOM 150 C CYS 18 -1.357 6.230 2.804 1.00 1.76 C ATOM 151 O CYS 18 -1.354 5.689 3.908 1.00 1.76 O ATOM 152 N GLU 19 -2.310 5.962 1.895 1.00 1.95 N ATOM 153 CA GLU 19 -3.219 4.919 2.262 1.00 1.95 C ATOM 154 CB GLU 19 -4.660 5.371 2.587 1.00 1.95 C ATOM 155 CG GLU 19 -5.440 6.003 1.435 1.00 1.95 C ATOM 156 CD GLU 19 -6.845 6.262 1.960 1.00 1.95 C ATOM 157 OE1 GLU 19 -6.996 6.338 3.210 1.00 1.95 O ATOM 158 OE2 GLU 19 -7.783 6.372 1.127 1.00 1.95 O ATOM 159 C GLU 19 -3.263 3.926 1.147 1.00 1.95 C ATOM 160 O GLU 19 -3.543 4.257 -0.004 1.00 1.95 O ATOM 161 N VAL 20 -2.959 2.658 1.467 1.00 1.89 N ATOM 162 CA VAL 20 -3.025 1.667 0.440 1.00 1.89 C ATOM 163 CB VAL 20 -1.734 0.928 0.219 1.00 1.89 C ATOM 164 CG1 VAL 20 -0.694 1.948 -0.275 1.00 1.89 C ATOM 165 CG2 VAL 20 -1.322 0.212 1.518 1.00 1.89 C ATOM 166 C VAL 20 -4.062 0.684 0.855 1.00 1.89 C ATOM 167 O VAL 20 -4.066 0.213 1.990 1.00 1.89 O ATOM 168 N ARG 21 -4.988 0.352 -0.061 1.00 2.24 N ATOM 169 CA ARG 21 -6.011 -0.577 0.305 1.00 2.24 C ATOM 170 CB ARG 21 -7.435 -0.042 0.100 1.00 2.24 C ATOM 171 CG ARG 21 -8.522 -1.019 0.550 1.00 2.24 C ATOM 172 CD ARG 21 -9.934 -0.539 0.221 1.00 2.24 C ATOM 173 NE ARG 21 -10.071 0.821 0.806 1.00 2.24 N ATOM 174 CZ ARG 21 -11.120 1.618 0.458 1.00 2.24 C ATOM 175 NH1 ARG 21 -12.093 1.145 -0.376 1.00 2.24 N ATOM 176 NH2 ARG 21 -11.191 2.893 0.940 1.00 2.24 N ATOM 177 C ARG 21 -5.887 -1.766 -0.582 1.00 2.24 C ATOM 178 O ARG 21 -5.644 -1.646 -1.780 1.00 2.24 O ATOM 179 N CYS 22 -6.036 -2.966 0.002 1.00 1.70 N ATOM 180 CA CYS 22 -6.001 -4.136 -0.819 1.00 1.70 C ATOM 181 CB CYS 22 -4.822 -5.072 -0.508 1.00 1.70 C ATOM 182 SG CYS 22 -4.800 -6.555 -1.559 1.00 1.70 S ATOM 183 C CYS 22 -7.262 -4.902 -0.571 1.00 1.70 C ATOM 184 O CYS 22 -7.552 -5.303 0.553 1.00 1.70 O ATOM 185 N ASP 23 -8.062 -5.093 -1.634 1.00 1.37 N ATOM 186 CA ASP 23 -9.280 -5.854 -1.591 1.00 1.37 C ATOM 187 CB ASP 23 -10.124 -5.723 -2.868 1.00 1.37 C ATOM 188 CG ASP 23 -10.735 -4.331 -2.914 1.00 1.37 C ATOM 189 OD1 ASP 23 -10.058 -3.373 -2.456 1.00 1.37 O ATOM 190 OD2 ASP 23 -11.895 -4.211 -3.392 1.00 1.37 O ATOM 191 C ASP 23 -8.936 -7.308 -1.424 1.00 1.37 C ATOM 192 O ASP 23 -9.699 -8.083 -0.852 1.00 1.37 O ATOM 193 N GLU 24 -7.749 -7.706 -1.916 1.00 1.98 N ATOM 194 CA GLU 24 -7.269 -9.060 -1.879 1.00 1.98 C ATOM 195 CB GLU 24 -7.205 -9.643 -0.455 1.00 1.98 C ATOM 196 CG GLU 24 -6.470 -10.985 -0.405 1.00 1.98 C ATOM 197 CD GLU 24 -6.229 -11.342 1.054 1.00 1.98 C ATOM 198 OE1 GLU 24 -6.268 -10.421 1.912 1.00 1.98 O ATOM 199 OE2 GLU 24 -5.998 -12.550 1.328 1.00 1.98 O ATOM 200 C GLU 24 -8.068 -9.966 -2.767 1.00 1.98 C ATOM 201 O GLU 24 -8.325 -11.119 -2.423 1.00 1.98 O ATOM 202 N SER 25 -8.490 -9.458 -3.946 1.00 1.79 N ATOM 203 CA SER 25 -9.095 -10.319 -4.923 1.00 1.79 C ATOM 204 CB SER 25 -10.606 -10.092 -5.125 1.00 1.79 C ATOM 205 OG SER 25 -11.117 -10.985 -6.107 1.00 1.79 O ATOM 206 C SER 25 -8.419 -10.001 -6.220 1.00 1.79 C ATOM 207 O SER 25 -8.519 -8.887 -6.725 1.00 1.79 O ATOM 208 N ASN 26 -7.731 -10.989 -6.815 1.00 1.55 N ATOM 209 CA ASN 26 -7.023 -10.772 -8.049 1.00 1.55 C ATOM 210 CB ASN 26 -7.912 -10.258 -9.195 1.00 1.55 C ATOM 211 CG ASN 26 -8.670 -11.436 -9.788 1.00 1.55 C ATOM 212 OD1 ASN 26 -8.217 -12.578 -9.732 1.00 1.55 O ATOM 213 ND2 ASN 26 -9.854 -11.145 -10.392 1.00 1.55 N ATOM 214 C ASN 26 -5.908 -9.784 -7.859 1.00 1.55 C ATOM 215 O ASN 26 -5.415 -9.220 -8.835 1.00 1.55 O ATOM 216 N HIS 27 -5.443 -9.608 -6.604 1.00 1.64 N ATOM 217 CA HIS 27 -4.303 -8.786 -6.290 1.00 1.64 C ATOM 218 ND1 HIS 27 -2.053 -11.305 -5.484 1.00 1.64 N ATOM 219 CG HIS 27 -2.858 -10.840 -6.503 1.00 1.64 C ATOM 220 CB HIS 27 -3.020 -9.393 -6.881 1.00 1.64 C ATOM 221 NE2 HIS 27 -3.038 -13.088 -6.382 1.00 1.64 N ATOM 222 CD2 HIS 27 -3.450 -11.944 -7.039 1.00 1.64 C ATOM 223 CE1 HIS 27 -2.200 -12.655 -5.455 1.00 1.64 C ATOM 224 C HIS 27 -4.451 -7.370 -6.778 1.00 1.64 C ATOM 225 O HIS 27 -3.605 -6.869 -7.518 1.00 1.64 O ATOM 226 N CYS 28 -5.533 -6.671 -6.375 1.00 1.65 N ATOM 227 CA CYS 28 -5.691 -5.305 -6.789 1.00 1.65 C ATOM 228 CB CYS 28 -7.126 -4.966 -7.219 1.00 1.65 C ATOM 229 SG CYS 28 -7.303 -3.237 -7.746 1.00 1.65 S ATOM 230 C CYS 28 -5.355 -4.437 -5.616 1.00 1.65 C ATOM 231 O CYS 28 -5.869 -4.619 -4.514 1.00 1.65 O ATOM 232 N VAL 29 -4.453 -3.462 -5.814 1.00 1.87 N ATOM 233 CA VAL 29 -4.111 -2.641 -4.696 1.00 1.87 C ATOM 234 CB VAL 29 -2.719 -2.868 -4.206 1.00 1.87 C ATOM 235 CG1 VAL 29 -1.753 -2.560 -5.360 1.00 1.87 C ATOM 236 CG2 VAL 29 -2.490 -1.984 -2.971 1.00 1.87 C ATOM 237 C VAL 29 -4.187 -1.214 -5.116 1.00 1.87 C ATOM 238 O VAL 29 -3.742 -0.852 -6.204 1.00 1.87 O ATOM 239 N GLU 30 -4.754 -0.355 -4.249 1.00 1.81 N ATOM 240 CA GLU 30 -4.813 1.034 -4.592 1.00 1.81 C ATOM 241 CB GLU 30 -6.178 1.712 -4.359 1.00 1.81 C ATOM 242 CG GLU 30 -6.160 3.210 -4.691 1.00 1.81 C ATOM 243 CD GLU 30 -7.591 3.726 -4.751 1.00 1.81 C ATOM 244 OE1 GLU 30 -8.289 3.398 -5.744 1.00 1.81 O ATOM 245 OE2 GLU 30 -8.003 4.468 -3.815 1.00 1.81 O ATOM 246 C GLU 30 -3.825 1.741 -3.734 1.00 1.81 C ATOM 247 O GLU 30 -3.775 1.546 -2.522 1.00 1.81 O ATOM 248 N VAL 31 -2.985 2.580 -4.355 1.00 1.26 N ATOM 249 CA VAL 31 -2.036 3.294 -3.563 1.00 1.26 C ATOM 250 CB VAL 31 -0.628 3.125 -4.046 1.00 1.26 C ATOM 251 CG1 VAL 31 0.296 3.981 -3.166 1.00 1.26 C ATOM 252 CG2 VAL 31 -0.282 1.627 -4.062 1.00 1.26 C ATOM 253 C VAL 31 -2.363 4.741 -3.685 1.00 1.26 C ATOM 254 O VAL 31 -2.351 5.314 -4.773 1.00 1.26 O ATOM 255 N ARG 32 -2.674 5.383 -2.550 1.00 2.29 N ATOM 256 CA ARG 32 -2.953 6.782 -2.594 1.00 2.29 C ATOM 257 CB ARG 32 -4.296 7.174 -1.965 1.00 2.29 C ATOM 258 CG ARG 32 -5.491 6.782 -2.833 1.00 2.29 C ATOM 259 CD ARG 32 -5.498 7.488 -4.194 1.00 2.29 C ATOM 260 NE ARG 32 -5.456 8.961 -3.943 1.00 2.29 N ATOM 261 CZ ARG 32 -5.171 9.833 -4.956 1.00 2.29 C ATOM 262 NH1 ARG 32 -4.963 9.372 -6.225 1.00 2.29 N ATOM 263 NH2 ARG 32 -5.088 11.172 -4.702 1.00 2.29 N ATOM 264 C ARG 32 -1.877 7.432 -1.808 1.00 2.29 C ATOM 265 O ARG 32 -1.504 6.971 -0.731 1.00 2.29 O ATOM 266 N CYS 33 -1.310 8.517 -2.349 1.00 1.66 N ATOM 267 CA CYS 33 -0.253 9.158 -1.640 1.00 1.66 C ATOM 268 CB CYS 33 1.130 8.874 -2.255 1.00 1.66 C ATOM 269 SG CYS 33 2.481 9.690 -1.355 1.00 1.66 S ATOM 270 C CYS 33 -0.504 10.622 -1.714 1.00 1.66 C ATOM 271 O CYS 33 -1.139 11.111 -2.645 1.00 1.66 O ATOM 272 N SER 34 -0.020 11.365 -0.709 1.00 1.80 N ATOM 273 CA SER 34 -0.223 12.773 -0.759 1.00 1.80 C ATOM 274 CB SER 34 -0.708 13.369 0.573 1.00 1.80 C ATOM 275 OG SER 34 -1.990 12.858 0.910 1.00 1.80 O ATOM 276 C SER 34 1.095 13.393 -1.087 1.00 1.80 C ATOM 277 O SER 34 2.131 13.044 -0.527 1.00 1.80 O ATOM 278 N ASP 35 1.056 14.353 -2.021 1.00 1.67 N ATOM 279 CA ASP 35 2.185 15.121 -2.454 1.00 1.67 C ATOM 280 CB ASP 35 3.047 15.590 -1.271 1.00 1.67 C ATOM 281 CG ASP 35 2.226 16.561 -0.434 1.00 1.67 C ATOM 282 OD1 ASP 35 1.087 16.895 -0.854 1.00 1.67 O ATOM 283 OD2 ASP 35 2.733 16.985 0.639 1.00 1.67 O ATOM 284 C ASP 35 3.083 14.363 -3.389 1.00 1.67 C ATOM 285 O ASP 35 4.015 14.945 -3.940 1.00 1.67 O ATOM 286 N THR 36 2.805 13.074 -3.651 1.00 2.13 N ATOM 287 CA THR 36 3.607 12.327 -4.584 1.00 2.13 C ATOM 288 CB THR 36 4.886 11.767 -4.019 1.00 2.13 C ATOM 289 OG1 THR 36 4.605 10.896 -2.933 1.00 2.13 O ATOM 290 CG2 THR 36 5.807 12.911 -3.572 1.00 2.13 C ATOM 291 C THR 36 2.777 11.150 -4.966 1.00 2.13 C ATOM 292 O THR 36 1.610 11.060 -4.594 1.00 2.13 O ATOM 293 N LYS 37 3.345 10.222 -5.755 1.00 2.30 N ATOM 294 CA LYS 37 2.591 9.041 -6.053 1.00 2.30 C ATOM 295 CB LYS 37 2.003 9.013 -7.476 1.00 2.30 C ATOM 296 CG LYS 37 3.043 9.042 -8.594 1.00 2.30 C ATOM 297 CD LYS 37 2.433 8.949 -9.994 1.00 2.30 C ATOM 298 CE LYS 37 1.710 10.229 -10.424 1.00 2.30 C ATOM 299 NZ LYS 37 2.678 11.344 -10.537 1.00 2.30 N ATOM 300 C LYS 37 3.504 7.874 -5.870 1.00 2.30 C ATOM 301 O LYS 37 4.717 7.990 -6.033 1.00 2.30 O ATOM 302 N TYR 38 2.955 6.714 -5.467 1.00 2.36 N ATOM 303 CA TYR 38 3.846 5.603 -5.346 1.00 2.36 C ATOM 304 CB TYR 38 4.245 5.227 -3.920 1.00 2.36 C ATOM 305 CG TYR 38 5.390 4.282 -4.058 1.00 2.36 C ATOM 306 CD1 TYR 38 6.600 4.733 -4.533 1.00 2.36 C ATOM 307 CD2 TYR 38 5.277 2.962 -3.694 1.00 2.36 C ATOM 308 CE1 TYR 38 7.673 3.885 -4.670 1.00 2.36 C ATOM 309 CE2 TYR 38 6.349 2.109 -3.825 1.00 2.36 C ATOM 310 CZ TYR 38 7.546 2.563 -4.317 1.00 2.36 C ATOM 311 OH TYR 38 8.636 1.678 -4.453 1.00 2.36 O ATOM 312 C TYR 38 3.197 4.410 -5.967 1.00 2.36 C ATOM 313 O TYR 38 1.978 4.349 -6.119 1.00 2.36 O ATOM 314 N THR 39 4.024 3.431 -6.377 1.00 2.06 N ATOM 315 CA THR 39 3.499 2.245 -6.981 1.00 2.06 C ATOM 316 CB THR 39 4.155 1.913 -8.296 1.00 2.06 C ATOM 317 OG1 THR 39 3.591 0.729 -8.842 1.00 2.06 O ATOM 318 CG2 THR 39 5.674 1.758 -8.103 1.00 2.06 C ATOM 319 C THR 39 3.723 1.121 -6.025 1.00 2.06 C ATOM 320 O THR 39 4.850 0.777 -5.684 1.00 2.06 O ATOM 321 N LEU 40 2.624 0.519 -5.546 1.00 1.44 N ATOM 322 CA LEU 40 2.738 -0.552 -4.600 1.00 1.44 C ATOM 323 CB LEU 40 2.149 -0.212 -3.219 1.00 1.44 C ATOM 324 CG LEU 40 2.916 0.870 -2.435 1.00 1.44 C ATOM 325 CD1 LEU 40 2.257 1.148 -1.074 1.00 1.44 C ATOM 326 CD2 LEU 40 4.404 0.509 -2.288 1.00 1.44 C ATOM 327 C LEU 40 1.924 -1.688 -5.108 1.00 1.44 C ATOM 328 O LEU 40 0.775 -1.513 -5.508 1.00 1.44 O ATOM 329 N CYS 41 2.508 -2.897 -5.102 1.00 1.48 N ATOM 330 CA CYS 41 1.755 -4.040 -5.517 1.00 1.48 C ATOM 331 CB CYS 41 2.537 -4.996 -6.433 1.00 1.48 C ATOM 332 SG CYS 41 1.542 -6.427 -6.951 1.00 1.48 S ATOM 333 C CYS 41 1.469 -4.780 -4.222 1.00 1.48 C ATOM 334 O CYS 41 0.285 -5.133 -3.984 1.00 1.48 O ATOM 335 OXT CYS 41 2.438 -4.996 -3.446 1.00 1.48 O TER 336 CYS 41 END