####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 40 ( 329), selected 40 , name T0955TS117_2 # Molecule2: number of CA atoms 41 ( 665), selected 40 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS117_2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 36 2 - 37 4.95 6.29 LCS_AVERAGE: 85.61 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 24 2 - 25 2.00 9.10 LCS_AVERAGE: 45.85 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 2 - 15 0.70 6.69 LCS_AVERAGE: 20.85 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 40 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT Q 2 Q 2 14 24 36 5 13 14 17 21 22 23 24 24 26 28 32 33 33 34 36 36 38 38 38 LCS_GDT E 3 E 3 14 24 36 10 13 14 17 21 22 23 24 24 26 28 32 33 33 34 36 36 38 38 38 LCS_GDT T 4 T 4 14 24 36 8 13 14 17 21 22 23 24 24 26 28 32 33 33 34 36 36 38 38 38 LCS_GDT R 5 R 5 14 24 36 10 13 14 17 21 22 23 24 24 26 28 32 33 33 34 36 36 38 38 38 LCS_GDT K 6 K 6 14 24 36 10 13 14 17 21 22 23 24 24 26 28 32 33 33 34 36 36 38 38 38 LCS_GDT K 7 K 7 14 24 36 10 13 14 17 21 22 23 24 24 26 28 32 33 33 34 36 36 38 38 38 LCS_GDT C 8 C 8 14 24 36 10 13 14 17 21 22 23 24 24 26 28 32 33 33 34 36 36 38 38 38 LCS_GDT T 9 T 9 14 24 36 10 13 14 17 21 22 23 24 24 26 28 32 33 33 34 36 36 38 38 38 LCS_GDT E 10 E 10 14 24 36 10 13 14 17 21 22 23 24 24 26 28 32 33 33 34 36 36 38 38 38 LCS_GDT M 11 M 11 14 24 36 10 13 14 17 21 22 23 24 24 26 28 32 33 33 34 36 36 38 38 38 LCS_GDT K 12 K 12 14 24 36 10 13 14 17 21 22 23 24 24 26 28 32 33 33 34 36 36 38 38 38 LCS_GDT K 13 K 13 14 24 36 10 13 14 17 21 22 23 24 24 26 28 32 33 33 34 36 36 38 38 38 LCS_GDT K 14 K 14 14 24 36 10 13 14 17 21 22 23 24 24 26 28 32 33 33 34 36 36 38 38 38 LCS_GDT F 15 F 15 14 24 36 4 10 14 17 19 20 23 24 24 26 28 32 33 33 34 36 36 38 38 38 LCS_GDT K 16 K 16 4 24 36 3 4 4 5 9 13 23 24 24 26 28 32 33 33 34 36 36 38 38 38 LCS_GDT N 17 N 17 5 24 36 3 8 13 17 21 22 23 24 24 26 28 32 33 33 34 36 36 38 38 38 LCS_GDT C 18 C 18 6 24 36 4 8 13 17 21 22 23 24 24 26 28 32 33 33 34 36 36 38 38 38 LCS_GDT E 19 E 19 6 24 36 3 8 13 17 21 22 23 24 24 26 28 32 33 33 34 36 36 38 38 38 LCS_GDT V 20 V 20 6 24 36 3 5 10 17 21 22 23 24 24 26 28 32 33 33 34 36 36 38 38 38 LCS_GDT R 21 R 21 6 24 36 3 5 10 17 21 22 23 24 24 24 28 32 33 33 34 36 36 38 38 38 LCS_GDT C 22 C 22 6 24 36 3 5 9 17 21 22 23 24 24 24 25 32 33 33 34 36 36 38 38 38 LCS_GDT D 23 D 23 6 24 36 3 5 13 17 21 22 23 24 24 24 28 32 33 33 34 36 36 38 38 38 LCS_GDT E 24 E 24 5 24 36 3 5 11 17 21 22 23 24 24 24 27 32 33 33 34 36 36 38 38 38 LCS_GDT S 25 S 25 5 24 36 3 5 10 15 19 22 23 24 24 24 28 32 33 33 34 36 36 38 38 38 LCS_GDT N 26 N 26 3 9 36 3 4 5 6 11 16 22 23 24 26 28 32 33 33 34 36 36 38 38 38 LCS_GDT H 27 H 27 7 12 36 4 5 9 12 19 20 22 23 24 26 28 32 33 33 34 36 36 38 38 38 LCS_GDT C 28 C 28 7 12 36 4 6 7 16 19 20 22 23 24 26 28 32 33 33 34 36 36 38 38 38 LCS_GDT V 29 V 29 7 12 36 4 6 9 12 19 20 22 23 24 26 28 32 33 33 34 36 36 38 38 38 LCS_GDT E 30 E 30 7 12 36 4 9 13 17 19 20 22 23 24 26 28 32 33 33 34 36 36 38 38 38 LCS_GDT V 31 V 31 7 12 36 3 6 13 17 19 20 22 23 24 26 28 32 33 33 34 36 36 38 38 38 LCS_GDT R 32 R 32 7 12 36 3 6 9 17 17 20 22 23 24 26 28 32 33 33 34 36 36 38 38 38 LCS_GDT C 33 C 33 7 12 36 3 6 7 9 14 19 22 23 23 24 28 32 33 33 34 36 36 38 38 38 LCS_GDT S 34 S 34 7 12 36 3 5 9 12 15 19 22 23 23 23 26 29 33 33 34 36 36 38 38 38 LCS_GDT D 35 D 35 4 12 36 3 4 9 12 15 19 22 23 23 23 23 25 28 31 32 36 36 38 38 38 LCS_GDT T 36 T 36 5 12 36 4 5 8 12 15 19 22 23 23 24 25 27 30 31 34 36 36 38 38 38 LCS_GDT K 37 K 37 5 12 36 4 4 8 11 14 18 22 23 23 24 26 27 30 31 34 36 36 38 38 38 LCS_GDT Y 38 Y 38 5 12 27 4 5 9 12 15 19 22 23 23 23 23 26 29 30 32 36 36 38 38 38 LCS_GDT T 39 T 39 5 11 27 4 5 9 12 15 19 22 23 23 23 25 27 29 30 32 36 36 38 38 38 LCS_GDT L 40 L 40 5 6 27 3 3 5 6 7 9 12 16 16 19 23 25 28 30 30 31 32 33 34 36 LCS_GDT C 41 C 41 3 6 27 3 3 4 6 7 9 12 16 16 17 21 22 24 28 30 31 32 33 34 34 LCS_AVERAGE LCS_A: 50.77 ( 20.85 45.85 85.61 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 13 14 17 21 22 23 24 24 26 28 32 33 33 34 36 36 38 38 38 GDT PERCENT_AT 24.39 31.71 34.15 41.46 51.22 53.66 56.10 58.54 58.54 63.41 68.29 78.05 80.49 80.49 82.93 87.80 87.80 92.68 92.68 92.68 GDT RMS_LOCAL 0.29 0.55 0.70 1.34 1.63 1.71 1.85 2.00 2.00 2.95 3.44 3.91 4.07 4.07 4.60 5.08 4.95 5.38 5.38 5.38 GDT RMS_ALL_AT 6.95 6.78 6.69 9.01 9.15 9.13 9.19 9.10 9.10 6.87 7.29 7.17 6.96 6.96 6.33 6.08 6.29 6.12 6.12 6.12 # Checking swapping # possible swapping detected: E 10 E 10 # possible swapping detected: E 19 E 19 # possible swapping detected: E 24 E 24 # possible swapping detected: E 30 E 30 # possible swapping detected: D 35 D 35 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA Q 2 Q 2 0.772 0 0.168 1.368 3.705 86.364 53.131 3.705 LGA E 3 E 3 2.264 0 0.063 0.730 3.290 45.000 56.768 0.309 LGA T 4 T 4 2.667 0 0.095 1.084 4.071 41.818 29.870 3.285 LGA R 5 R 5 1.296 0 0.102 1.408 9.961 65.909 31.240 9.961 LGA K 6 K 6 1.234 0 0.059 0.715 4.070 69.545 47.273 4.070 LGA K 7 K 7 1.529 0 0.072 0.671 4.852 70.000 43.030 4.852 LGA C 8 C 8 1.137 0 0.088 0.737 1.478 73.636 70.909 1.052 LGA T 9 T 9 1.277 0 0.037 0.130 2.594 69.545 58.182 1.823 LGA E 10 E 10 1.012 0 0.035 0.978 1.757 77.727 67.879 1.757 LGA M 11 M 11 1.371 0 0.081 0.943 6.589 62.273 41.591 6.589 LGA K 12 K 12 2.292 0 0.031 0.633 6.483 38.636 20.202 6.483 LGA K 13 K 13 1.816 0 0.045 0.595 5.686 54.545 39.192 5.686 LGA K 14 K 14 0.479 0 0.056 0.618 6.611 70.909 44.040 6.611 LGA F 15 F 15 3.948 0 0.152 1.540 13.392 15.000 5.455 13.392 LGA K 16 K 16 3.777 0 0.349 1.398 11.020 21.818 9.697 11.020 LGA N 17 N 17 1.212 0 0.181 1.330 5.164 65.909 40.909 4.934 LGA C 18 C 18 0.749 0 0.009 0.056 0.990 86.364 84.848 0.990 LGA E 19 E 19 1.072 0 0.241 0.434 2.847 73.636 57.576 2.533 LGA V 20 V 20 1.901 0 0.106 1.082 5.041 50.909 40.000 2.090 LGA R 21 R 21 1.919 0 0.421 0.988 6.233 37.727 22.975 4.062 LGA C 22 C 22 2.514 0 0.096 0.895 6.012 49.091 34.545 6.012 LGA D 23 D 23 1.408 0 0.319 1.325 6.266 39.091 23.409 4.690 LGA E 24 E 24 2.433 0 0.078 0.854 10.209 55.000 25.051 10.187 LGA S 25 S 25 2.888 0 0.189 0.648 6.325 22.273 14.848 6.325 LGA N 26 N 26 8.728 0 0.073 1.190 13.084 0.000 0.000 10.758 LGA H 27 H 27 9.357 0 0.463 0.452 10.956 0.000 0.000 10.072 LGA C 28 C 28 10.297 0 0.038 0.753 12.571 0.000 0.000 12.571 LGA V 29 V 29 8.973 0 0.079 0.099 9.327 0.000 0.000 8.042 LGA E 30 E 30 9.673 0 0.111 0.586 10.594 0.000 0.000 10.594 LGA V 31 V 31 9.246 0 0.068 0.094 10.126 0.000 0.000 9.551 LGA R 32 R 32 8.817 0 0.239 0.440 9.439 0.000 0.000 8.469 LGA C 33 C 33 9.268 0 0.517 0.518 9.838 0.000 0.000 9.183 LGA S 34 S 34 11.916 0 0.371 0.832 15.922 0.000 0.000 9.739 LGA D 35 D 35 19.135 0 0.401 1.139 22.646 0.000 0.000 22.646 LGA T 36 T 36 19.199 0 0.485 0.891 19.199 0.000 0.000 17.823 LGA K 37 K 37 17.648 0 0.079 1.239 18.467 0.000 0.000 17.554 LGA Y 38 Y 38 19.025 0 0.169 1.148 20.110 0.000 0.000 17.002 LGA T 39 T 39 18.338 0 0.448 0.931 19.407 0.000 0.000 16.383 LGA L 40 L 40 16.648 0 0.079 1.031 17.264 0.000 0.000 14.622 LGA C 41 C 41 18.922 0 0.245 0.889 22.669 0.000 0.000 22.669 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 40 160 160 100.00 329 329 100.00 41 40 SUMMARY(RMSD_GDC): 6.059 6.114 6.862 32.749 23.479 11.500 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 40 41 4.0 24 2.00 54.878 53.729 1.144 LGA_LOCAL RMSD: 1.999 Number of atoms: 24 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 9.097 Number of assigned atoms: 40 Std_ASGN_ATOMS RMSD: 6.059 Standard rmsd on all 40 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.042765 * X + 0.993046 * Y + 0.109689 * Z + -4.688379 Y_new = -0.953434 * X + 0.073372 * Y + -0.292541 * Z + -1.699676 Z_new = -0.298555 * X + -0.092071 * Y + 0.949941 * Z + 2.353456 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.525973 0.303178 -0.096621 [DEG: -87.4318 17.3708 -5.5360 ] ZXZ: 0.358729 0.317749 -1.869931 [DEG: 20.5537 18.2057 -107.1391 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS117_2 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS117_2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 40 41 4.0 24 2.00 53.729 6.06 REMARK ---------------------------------------------------------- MOLECULE T0955TS117_2 PFRMAT TS TARGET T0955 MODEL 2 PARENT N/A ATOM 1 N GLN 2 -0.972 -13.074 1.174 1.00 1.10 ATOM 2 CA GLN 2 -0.090 -12.229 2.006 1.00 1.10 ATOM 3 C GLN 2 0.271 -10.875 1.362 1.00 1.10 ATOM 4 O GLN 2 0.550 -9.904 2.072 1.00 1.10 ATOM 5 CB GLN 2 1.197 -12.990 2.334 1.00 1.10 ATOM 6 CG GLN 2 0.997 -14.189 3.246 1.00 1.10 ATOM 7 CD GLN 2 0.458 -13.795 4.608 1.00 1.10 ATOM 8 OE1 GLN 2 0.949 -12.853 5.237 1.00 1.10 ATOM 9 NE2 GLN 2 -0.555 -14.516 5.074 1.00 1.10 ATOM 10 N GLU 3 0.226 -10.836 0.021 1.00 1.30 ATOM 11 CA GLU 3 0.581 -9.667 -0.813 1.00 1.30 ATOM 12 C GLU 3 -0.108 -8.330 -0.454 1.00 1.30 ATOM 13 O GLU 3 0.530 -7.273 -0.498 1.00 1.30 ATOM 14 CB GLU 3 0.278 -9.992 -2.277 1.00 1.30 ATOM 15 CG GLU 3 1.125 -11.115 -2.861 1.00 1.30 ATOM 16 CD GLU 3 0.654 -12.480 -2.441 1.00 1.30 ATOM 17 OE1 GLU 3 -0.113 -12.565 -1.513 1.00 1.30 ATOM 18 OE2 GLU 3 1.065 -13.440 -3.050 1.00 1.30 ATOM 19 N THR 4 -1.379 -8.415 -0.041 1.00 1.43 ATOM 20 CA THR 4 -2.205 -7.277 0.414 1.00 1.43 ATOM 21 C THR 4 -1.585 -6.552 1.634 1.00 1.43 ATOM 22 O THR 4 -1.202 -5.375 1.542 1.00 1.43 ATOM 23 CB THR 4 -3.630 -7.744 0.768 1.00 1.43 ATOM 24 OG1 THR 4 -4.258 -8.292 -0.399 1.00 1.43 ATOM 25 CG2 THR 4 -4.459 -6.581 1.287 1.00 1.43 ATOM 26 N ARG 5 -1.482 -7.283 2.749 1.00 1.04 ATOM 27 CA ARG 5 -0.862 -6.804 3.988 1.00 1.04 ATOM 28 C ARG 5 0.669 -6.623 3.928 1.00 1.04 ATOM 29 O ARG 5 1.238 -5.901 4.760 1.00 1.04 ATOM 30 CB ARG 5 -1.190 -7.767 5.120 1.00 1.04 ATOM 31 CG ARG 5 -0.587 -9.154 4.975 1.00 1.04 ATOM 32 CD ARG 5 -1.179 -10.115 5.940 1.00 1.04 ATOM 33 NE ARG 5 -0.829 -9.790 7.314 1.00 1.04 ATOM 34 CZ ARG 5 0.267 -10.245 7.951 1.00 1.04 ATOM 35 NH1 ARG 5 1.107 -11.041 7.328 1.00 1.04 ATOM 36 NH2 ARG 5 0.497 -9.890 9.203 1.00 1.04 ATOM 37 N LYS 6 1.315 -7.281 2.949 1.00 1.23 ATOM 38 CA LYS 6 2.756 -7.116 2.666 1.00 1.23 ATOM 39 C LYS 6 2.990 -5.664 2.208 1.00 1.23 ATOM 40 O LYS 6 3.781 -4.931 2.808 1.00 1.23 ATOM 41 CB LYS 6 3.235 -8.105 1.603 1.00 1.23 ATOM 42 CG LYS 6 4.717 -8.002 1.270 1.00 1.23 ATOM 43 CD LYS 6 5.126 -9.048 0.243 1.00 1.23 ATOM 44 CE LYS 6 6.600 -8.924 -0.118 1.00 1.23 ATOM 45 NZ LYS 6 7.014 -9.942 -1.121 1.00 1.23 ATOM 46 N LYS 7 2.282 -5.293 1.128 1.00 1.67 ATOM 47 CA LYS 7 2.333 -3.966 0.485 1.00 1.67 ATOM 48 C LYS 7 1.963 -2.859 1.486 1.00 1.67 ATOM 49 O LYS 7 2.666 -1.846 1.579 1.00 1.67 ATOM 50 CB LYS 7 1.397 -3.916 -0.724 1.00 1.67 ATOM 51 CG LYS 7 1.885 -4.709 -1.930 1.00 1.67 ATOM 52 CD LYS 7 0.919 -4.585 -3.099 1.00 1.67 ATOM 53 CE LYS 7 1.414 -5.363 -4.311 1.00 1.67 ATOM 54 NZ LYS 7 0.521 -5.186 -5.487 1.00 1.67 ATOM 55 N CYS 8 0.879 -3.088 2.244 1.00 1.34 ATOM 56 CA CYS 8 0.396 -2.170 3.290 1.00 1.34 ATOM 57 C CYS 8 1.370 -1.979 4.458 1.00 1.34 ATOM 58 O CYS 8 1.456 -0.875 5.004 1.00 1.34 ATOM 59 CB CYS 8 -0.935 -2.674 3.850 1.00 1.34 ATOM 60 SG CYS 8 -2.320 -2.544 2.694 1.00 1.34 ATOM 61 N THR 9 2.089 -3.047 4.836 1.00 0.76 ATOM 62 CA THR 9 3.188 -2.960 5.819 1.00 0.76 ATOM 63 C THR 9 4.383 -2.110 5.337 1.00 0.76 ATOM 64 O THR 9 4.949 -1.351 6.128 1.00 0.76 ATOM 65 CB THR 9 3.689 -4.368 6.188 1.00 0.76 ATOM 66 OG1 THR 9 2.624 -5.115 6.791 1.00 0.76 ATOM 67 CG2 THR 9 4.856 -4.282 7.160 1.00 0.76 ATOM 68 N GLU 10 4.721 -2.215 4.039 1.00 1.39 ATOM 69 CA GLU 10 5.839 -1.472 3.413 1.00 1.39 ATOM 70 C GLU 10 5.478 0.027 3.387 1.00 1.39 ATOM 71 O GLU 10 6.338 0.895 3.584 1.00 1.39 ATOM 72 CB GLU 10 6.118 -1.980 1.997 1.00 1.39 ATOM 73 CG GLU 10 6.719 -3.377 1.938 1.00 1.39 ATOM 74 CD GLU 10 8.044 -3.474 2.641 1.00 1.39 ATOM 75 OE1 GLU 10 8.908 -2.682 2.351 1.00 1.39 ATOM 76 OE2 GLU 10 8.191 -4.341 3.470 1.00 1.39 ATOM 77 N MET 11 4.180 0.279 3.159 1.00 1.77 ATOM 78 CA MET 11 3.535 1.604 3.187 1.00 1.77 ATOM 79 C MET 11 3.600 2.202 4.615 1.00 1.77 ATOM 80 O MET 11 3.909 3.389 4.783 1.00 1.77 ATOM 81 CB MET 11 2.089 1.500 2.707 1.00 1.77 ATOM 82 CG MET 11 1.936 1.270 1.210 1.00 1.77 ATOM 83 SD MET 11 2.527 2.663 0.229 1.00 1.77 ATOM 84 CE MET 11 1.320 3.915 0.656 1.00 1.77 ATOM 85 N LYS 12 3.295 1.357 5.611 1.00 1.32 ATOM 86 CA LYS 12 3.451 1.641 7.048 1.00 1.32 ATOM 87 C LYS 12 4.905 2.007 7.422 1.00 1.32 ATOM 88 O LYS 12 5.113 2.885 8.260 1.00 1.32 ATOM 89 CB LYS 12 2.987 0.442 7.874 1.00 1.32 ATOM 90 CG LYS 12 3.044 0.656 9.381 1.00 1.32 ATOM 91 CD LYS 12 2.582 -0.584 10.133 1.00 1.32 ATOM 92 CE LYS 12 2.612 -0.363 11.637 1.00 1.32 ATOM 93 NZ LYS 12 2.143 -1.560 12.386 1.00 1.32 ATOM 94 N LYS 13 5.882 1.295 6.837 1.00 1.41 ATOM 95 CA LYS 13 7.327 1.596 6.977 1.00 1.41 ATOM 96 C LYS 13 7.701 2.979 6.419 1.00 1.41 ATOM 97 O LYS 13 8.526 3.680 7.015 1.00 1.41 ATOM 98 CB LYS 13 8.162 0.519 6.282 1.00 1.41 ATOM 99 CG LYS 13 8.140 -0.837 6.973 1.00 1.41 ATOM 100 CD LYS 13 8.925 -1.873 6.182 1.00 1.41 ATOM 101 CE LYS 13 8.832 -3.249 6.826 1.00 1.41 ATOM 102 NZ LYS 13 9.517 -4.291 6.014 1.00 1.41 ATOM 103 N LYS 14 7.128 3.334 5.258 1.00 2.08 ATOM 104 CA LYS 14 7.360 4.626 4.581 1.00 2.08 ATOM 105 C LYS 14 6.918 5.845 5.429 1.00 2.08 ATOM 106 O LYS 14 7.653 6.830 5.543 1.00 2.08 ATOM 107 CB LYS 14 6.637 4.645 3.233 1.00 2.08 ATOM 108 CG LYS 14 7.260 3.749 2.172 1.00 2.08 ATOM 109 CD LYS 14 6.460 3.786 0.879 1.00 2.08 ATOM 110 CE LYS 14 7.071 2.878 -0.178 1.00 2.08 ATOM 111 NZ LYS 14 6.297 2.899 -1.448 1.00 2.08 ATOM 112 N PHE 15 5.716 5.724 6.017 1.00 2.20 ATOM 113 CA PHE 15 5.045 6.682 6.937 1.00 2.20 ATOM 114 C PHE 15 5.222 8.213 6.780 1.00 2.20 ATOM 115 O PHE 15 6.094 8.815 7.421 1.00 2.20 ATOM 116 CB PHE 15 5.473 6.327 8.363 1.00 2.20 ATOM 117 CG PHE 15 4.798 7.154 9.421 1.00 2.20 ATOM 118 CD1 PHE 15 3.468 6.935 9.749 1.00 2.20 ATOM 119 CD2 PHE 15 5.491 8.152 10.089 1.00 2.20 ATOM 120 CE1 PHE 15 2.846 7.696 10.721 1.00 2.20 ATOM 121 CE2 PHE 15 4.872 8.912 11.062 1.00 2.20 ATOM 122 CZ PHE 15 3.548 8.683 11.379 1.00 2.20 ATOM 123 N LYS 16 4.411 8.803 5.887 1.00 1.79 ATOM 124 CA LYS 16 4.528 10.204 5.430 1.00 1.79 ATOM 125 C LYS 16 3.131 10.851 5.331 1.00 1.79 ATOM 126 O LYS 16 2.685 11.483 6.294 1.00 1.79 ATOM 127 CB LYS 16 5.244 10.277 4.080 1.00 1.79 ATOM 128 CG LYS 16 6.716 9.890 4.128 1.00 1.79 ATOM 129 CD LYS 16 7.357 9.990 2.752 1.00 1.79 ATOM 130 CE LYS 16 8.823 9.582 2.793 1.00 1.79 ATOM 131 NZ LYS 16 9.460 9.656 1.449 1.00 1.79 ATOM 132 N ASN 17 2.458 10.691 4.177 1.00 3.63 ATOM 133 CA ASN 17 1.139 11.296 3.874 1.00 3.63 ATOM 134 C ASN 17 0.358 10.553 2.759 1.00 3.63 ATOM 135 O ASN 17 -0.701 11.023 2.313 1.00 3.63 ATOM 136 CB ASN 17 1.313 12.757 3.501 1.00 3.63 ATOM 137 CG ASN 17 2.140 12.940 2.259 1.00 3.63 ATOM 138 OD1 ASN 17 2.640 11.968 1.681 1.00 3.63 ATOM 139 ND2 ASN 17 2.295 14.169 1.836 1.00 3.63 ATOM 140 N CYS 18 0.863 9.374 2.366 1.00 6.91 ATOM 141 CA CYS 18 0.282 8.505 1.311 1.00 6.91 ATOM 142 C CYS 18 -0.730 7.498 1.890 1.00 6.91 ATOM 143 O CYS 18 -0.650 7.171 3.078 1.00 6.91 ATOM 144 CB CYS 18 1.385 7.739 0.581 1.00 6.91 ATOM 145 SG CYS 18 2.530 8.791 -0.342 1.00 6.91 ATOM 146 N GLU 19 -1.695 7.060 1.064 1.00 5.52 ATOM 147 CA GLU 19 -2.741 6.101 1.472 1.00 5.52 ATOM 148 C GLU 19 -2.799 4.858 0.559 1.00 5.52 ATOM 149 O GLU 19 -2.660 4.982 -0.666 1.00 5.52 ATOM 150 CB GLU 19 -4.108 6.790 1.481 1.00 5.52 ATOM 151 CG GLU 19 -5.262 5.893 1.900 1.00 5.52 ATOM 152 CD GLU 19 -6.572 6.625 1.986 1.00 5.52 ATOM 153 OE1 GLU 19 -6.557 7.833 1.982 1.00 5.52 ATOM 154 OE2 GLU 19 -7.589 5.977 2.055 1.00 5.52 ATOM 155 N VAL 20 -2.971 3.673 1.168 1.00 6.44 ATOM 156 CA VAL 20 -3.023 2.380 0.450 1.00 6.44 ATOM 157 C VAL 20 -4.402 1.785 0.804 1.00 6.44 ATOM 158 O VAL 20 -4.796 1.753 1.973 1.00 6.44 ATOM 159 CB VAL 20 -1.889 1.431 0.882 1.00 6.44 ATOM 160 CG1 VAL 20 -1.988 1.124 2.368 1.00 6.44 ATOM 161 CG2 VAL 20 -1.945 0.151 0.061 1.00 6.44 ATOM 162 N ARG 21 -5.082 1.241 -0.210 1.00 5.93 ATOM 163 CA ARG 21 -6.449 0.711 -0.082 1.00 5.93 ATOM 164 C ARG 21 -6.433 -0.610 -0.865 1.00 5.93 ATOM 165 O ARG 21 -7.395 -0.972 -1.557 1.00 5.93 ATOM 166 CB ARG 21 -7.494 1.664 -0.645 1.00 5.93 ATOM 167 CG ARG 21 -7.560 3.019 0.043 1.00 5.93 ATOM 168 CD ARG 21 -8.636 3.870 -0.524 1.00 5.93 ATOM 169 NE ARG 21 -9.959 3.352 -0.213 1.00 5.93 ATOM 170 CZ ARG 21 -11.104 3.797 -0.765 1.00 5.93 ATOM 171 NH1 ARG 21 -11.073 4.767 -1.653 1.00 5.93 ATOM 172 NH2 ARG 21 -12.260 3.260 -0.415 1.00 5.93 ATOM 173 N CYS 22 -5.309 -1.324 -0.700 1.00 5.74 ATOM 174 CA CYS 22 -4.985 -2.591 -1.378 1.00 5.74 ATOM 175 C CYS 22 -5.863 -3.811 -1.069 1.00 5.74 ATOM 176 O CYS 22 -6.230 -4.052 0.088 1.00 5.74 ATOM 177 CB CYS 22 -3.539 -2.968 -1.052 1.00 5.74 ATOM 178 SG CYS 22 -2.970 -4.481 -1.864 1.00 5.74 ATOM 179 N ASP 23 -6.220 -4.534 -2.138 1.00 5.17 ATOM 180 CA ASP 23 -7.057 -5.749 -2.122 1.00 5.17 ATOM 181 C ASP 23 -6.563 -6.577 -3.329 1.00 5.17 ATOM 182 O ASP 23 -6.965 -6.330 -4.476 1.00 5.17 ATOM 183 CB ASP 23 -8.548 -5.427 -2.239 1.00 5.17 ATOM 184 CG ASP 23 -9.431 -6.663 -2.122 1.00 5.17 ATOM 185 OD1 ASP 23 -8.901 -7.749 -2.112 1.00 5.17 ATOM 186 OD2 ASP 23 -10.627 -6.510 -2.044 1.00 5.17 ATOM 187 N GLU 24 -5.651 -7.521 -3.052 1.00 4.95 ATOM 188 CA GLU 24 -5.053 -8.414 -4.059 1.00 4.95 ATOM 189 C GLU 24 -5.956 -9.616 -4.428 1.00 4.95 ATOM 190 O GLU 24 -6.086 -9.936 -5.617 1.00 4.95 ATOM 191 CB GLU 24 -3.703 -8.928 -3.554 1.00 4.95 ATOM 192 CG GLU 24 -2.626 -7.858 -3.438 1.00 4.95 ATOM 193 CD GLU 24 -2.228 -7.282 -4.769 1.00 4.95 ATOM 194 OE1 GLU 24 -2.101 -8.033 -5.706 1.00 4.95 ATOM 195 OE2 GLU 24 -2.053 -6.089 -4.847 1.00 4.95 ATOM 196 N SER 25 -6.564 -10.262 -3.421 1.00 6.17 ATOM 197 CA SER 25 -7.453 -11.421 -3.621 1.00 6.17 ATOM 198 C SER 25 -8.849 -11.229 -2.999 1.00 6.17 ATOM 199 O SER 25 -9.786 -10.847 -3.711 1.00 6.17 ATOM 200 CB SER 25 -6.810 -12.663 -3.037 1.00 6.17 ATOM 201 OG SER 25 -6.648 -12.540 -1.650 1.00 6.17 ATOM 202 N ASN 26 -8.977 -11.491 -1.688 1.00 3.78 ATOM 203 CA ASN 26 -10.251 -11.399 -0.949 1.00 3.78 ATOM 204 C ASN 26 -10.305 -10.295 0.122 1.00 3.78 ATOM 205 O ASN 26 -11.372 -9.708 0.346 1.00 3.78 ATOM 206 CB ASN 26 -10.567 -12.741 -0.313 1.00 3.78 ATOM 207 CG ASN 26 -10.844 -13.812 -1.332 1.00 3.78 ATOM 208 OD1 ASN 26 -11.471 -13.555 -2.366 1.00 3.78 ATOM 209 ND2 ASN 26 -10.388 -15.008 -1.060 1.00 3.78 ATOM 210 N HIS 27 -9.160 -10.017 0.765 1.00 3.14 ATOM 211 CA HIS 27 -9.051 -9.039 1.867 1.00 3.14 ATOM 212 C HIS 27 -8.590 -7.640 1.438 1.00 3.14 ATOM 213 O HIS 27 -7.590 -7.509 0.725 1.00 3.14 ATOM 214 CB HIS 27 -8.090 -9.566 2.938 1.00 3.14 ATOM 215 CG HIS 27 -8.556 -10.827 3.596 1.00 3.14 ATOM 216 ND1 HIS 27 -9.521 -10.839 4.580 1.00 3.14 ATOM 217 CD2 HIS 27 -8.189 -12.117 3.412 1.00 3.14 ATOM 218 CE1 HIS 27 -9.729 -12.084 4.974 1.00 3.14 ATOM 219 NE2 HIS 27 -8.932 -12.878 4.280 1.00 3.14 ATOM 220 N CYS 28 -9.375 -6.620 1.813 1.00 5.51 ATOM 221 CA CYS 28 -9.096 -5.212 1.487 1.00 5.51 ATOM 222 C CYS 28 -8.591 -4.585 2.783 1.00 5.51 ATOM 223 O CYS 28 -9.248 -4.680 3.831 1.00 5.51 ATOM 224 CB CYS 28 -10.338 -4.476 0.982 1.00 5.51 ATOM 225 SG CYS 28 -10.047 -2.742 0.560 1.00 5.51 ATOM 226 N VAL 29 -7.395 -3.993 2.712 1.00 4.98 ATOM 227 CA VAL 29 -6.776 -3.270 3.833 1.00 4.98 ATOM 228 C VAL 29 -6.585 -1.786 3.479 1.00 4.98 ATOM 229 O VAL 29 -6.078 -1.478 2.395 1.00 4.98 ATOM 230 CB VAL 29 -5.415 -3.896 4.192 1.00 4.98 ATOM 231 CG1 VAL 29 -4.741 -3.104 5.302 1.00 4.98 ATOM 232 CG2 VAL 29 -5.604 -5.347 4.603 1.00 4.98 ATOM 233 N GLU 30 -7.070 -0.879 4.340 1.00 3.68 ATOM 234 CA GLU 30 -7.023 0.566 4.054 1.00 3.68 ATOM 235 C GLU 30 -6.240 1.227 5.196 1.00 3.68 ATOM 236 O GLU 30 -6.660 1.181 6.360 1.00 3.68 ATOM 237 CB GLU 30 -8.426 1.165 3.941 1.00 3.68 ATOM 238 CG GLU 30 -9.240 0.643 2.765 1.00 3.68 ATOM 239 CD GLU 30 -10.605 1.266 2.675 1.00 3.68 ATOM 240 OE1 GLU 30 -11.197 1.505 3.700 1.00 3.68 ATOM 241 OE2 GLU 30 -11.056 1.505 1.580 1.00 3.68 ATOM 242 N VAL 31 -5.080 1.800 4.843 1.00 3.61 ATOM 243 CA VAL 31 -4.187 2.539 5.759 1.00 3.61 ATOM 244 C VAL 31 -3.757 3.882 5.144 1.00 3.61 ATOM 245 O VAL 31 -3.268 3.937 4.011 1.00 3.61 ATOM 246 CB VAL 31 -2.936 1.702 6.084 1.00 3.61 ATOM 247 CG1 VAL 31 -2.004 2.473 7.005 1.00 3.61 ATOM 248 CG2 VAL 31 -3.348 0.380 6.715 1.00 3.61 ATOM 249 N ARG 32 -3.995 4.959 5.898 1.00 3.49 ATOM 250 CA ARG 32 -3.640 6.331 5.521 1.00 3.49 ATOM 251 C ARG 32 -2.418 6.487 6.444 1.00 3.49 ATOM 252 O ARG 32 -2.543 6.306 7.665 1.00 3.49 ATOM 253 CB ARG 32 -4.727 7.356 5.807 1.00 3.49 ATOM 254 CG ARG 32 -4.378 8.784 5.420 1.00 3.49 ATOM 255 CD ARG 32 -5.574 9.666 5.435 1.00 3.49 ATOM 256 NE ARG 32 -6.486 9.359 4.344 1.00 3.49 ATOM 257 CZ ARG 32 -7.727 9.867 4.221 1.00 3.49 ATOM 258 NH1 ARG 32 -8.189 10.704 5.125 1.00 3.49 ATOM 259 NH2 ARG 32 -8.482 9.526 3.190 1.00 3.49 ATOM 260 N CYS 33 -1.248 6.807 5.874 1.00 3.72 ATOM 261 CA CYS 33 0.006 6.823 6.643 1.00 3.72 ATOM 262 C CYS 33 0.455 8.245 7.015 1.00 3.72 ATOM 263 O CYS 33 1.652 8.568 7.013 1.00 3.72 ATOM 264 CB CYS 33 1.122 6.145 5.847 1.00 3.72 ATOM 265 SG CYS 33 0.819 4.397 5.493 1.00 3.72 ATOM 266 N SER 34 -0.540 9.040 7.433 1.00 3.41 ATOM 267 CA SER 34 -0.382 10.435 7.881 1.00 3.41 ATOM 268 C SER 34 -0.712 10.389 9.388 1.00 3.41 ATOM 269 O SER 34 -0.855 11.425 10.055 1.00 3.41 ATOM 270 CB SER 34 -1.304 11.381 7.135 1.00 3.41 ATOM 271 OG SER 34 -2.648 11.065 7.377 1.00 3.41 ATOM 272 N ASP 35 -0.787 9.141 9.888 1.00 3.72 ATOM 273 CA ASP 35 -1.088 8.715 11.272 1.00 3.72 ATOM 274 C ASP 35 -2.571 8.956 11.673 1.00 3.72 ATOM 275 O ASP 35 -2.867 9.573 12.707 1.00 3.72 ATOM 276 CB ASP 35 -0.171 9.449 12.253 1.00 3.72 ATOM 277 CG ASP 35 -0.085 8.764 13.610 1.00 3.72 ATOM 278 OD1 ASP 35 -0.293 7.575 13.667 1.00 3.72 ATOM 279 OD2 ASP 35 0.188 9.435 14.576 1.00 3.72 ATOM 280 N THR 36 -3.482 8.436 10.831 1.00 3.75 ATOM 281 CA THR 36 -4.946 8.512 11.024 1.00 3.75 ATOM 282 C THR 36 -5.666 7.151 10.885 1.00 3.75 ATOM 283 O THR 36 -5.832 6.449 11.889 1.00 3.75 ATOM 284 CB THR 36 -5.566 9.510 10.028 1.00 3.75 ATOM 285 OG1 THR 36 -5.245 9.116 8.689 1.00 3.75 ATOM 286 CG2 THR 36 -5.035 10.914 10.281 1.00 3.75 ATOM 287 N LYS 37 -6.082 6.790 9.659 1.00 5.09 ATOM 288 CA LYS 37 -6.722 5.490 9.357 1.00 5.09 ATOM 289 C LYS 37 -5.748 4.313 9.220 1.00 5.09 ATOM 290 O LYS 37 -4.672 4.458 8.632 1.00 5.09 ATOM 291 CB LYS 37 -7.547 5.607 8.074 1.00 5.09 ATOM 292 CG LYS 37 -8.394 4.382 7.757 1.00 5.09 ATOM 293 CD LYS 37 -9.302 4.633 6.562 1.00 5.09 ATOM 294 CE LYS 37 -10.224 3.450 6.308 1.00 5.09 ATOM 295 NZ LYS 37 -11.135 3.691 5.157 1.00 5.09 ATOM 296 N TYR 38 -6.114 3.175 9.833 1.00 4.46 ATOM 297 CA TYR 38 -5.279 1.959 9.995 1.00 4.46 ATOM 298 C TYR 38 -6.186 0.735 10.257 1.00 4.46 ATOM 299 O TYR 38 -6.838 0.642 11.305 1.00 4.46 ATOM 300 CB TYR 38 -4.270 2.135 11.133 1.00 4.46 ATOM 301 CG TYR 38 -3.276 1.000 11.248 1.00 4.46 ATOM 302 CD1 TYR 38 -2.114 1.019 10.491 1.00 4.46 ATOM 303 CD2 TYR 38 -3.527 -0.057 12.109 1.00 4.46 ATOM 304 CE1 TYR 38 -1.205 -0.017 10.595 1.00 4.46 ATOM 305 CE2 TYR 38 -2.618 -1.093 12.213 1.00 4.46 ATOM 306 CZ TYR 38 -1.461 -1.074 11.460 1.00 4.46 ATOM 307 OH TYR 38 -0.557 -2.106 11.565 1.00 4.46 ATOM 308 N THR 39 -6.268 -0.153 9.255 1.00 5.43 ATOM 309 CA THR 39 -7.042 -1.409 9.317 1.00 5.43 ATOM 310 C THR 39 -6.137 -2.616 8.978 1.00 5.43 ATOM 311 O THR 39 -6.629 -3.701 8.624 1.00 5.43 ATOM 312 CB THR 39 -8.246 -1.370 8.359 1.00 5.43 ATOM 313 OG1 THR 39 -7.787 -1.148 7.018 1.00 5.43 ATOM 314 CG2 THR 39 -9.206 -0.259 8.752 1.00 5.43 ATOM 315 N LEU 40 -4.821 -2.433 9.157 1.00 7.39 ATOM 316 CA LEU 40 -3.804 -3.452 8.839 1.00 7.39 ATOM 317 C LEU 40 -3.417 -4.392 10.001 1.00 7.39 ATOM 318 O LEU 40 -3.096 -3.922 11.101 1.00 7.39 ATOM 319 CB LEU 40 -2.537 -2.750 8.333 1.00 7.39 ATOM 320 CG LEU 40 -1.319 -3.654 8.107 1.00 7.39 ATOM 321 CD1 LEU 40 -1.610 -4.623 6.969 1.00 7.39 ATOM 322 CD2 LEU 40 -0.099 -2.798 7.799 1.00 7.39 ATOM 323 N CYS 41 -3.456 -5.705 9.734 1.00 7.56 ATOM 324 CA CYS 41 -3.079 -6.761 10.689 1.00 7.56 ATOM 325 C CYS 41 -2.292 -7.881 10.001 1.00 7.56 ATOM 326 O CYS 41 -1.415 -8.477 10.663 1.00 7.56 ATOM 327 CB CYS 41 -4.322 -7.357 11.352 1.00 7.56 ATOM 328 SG CYS 41 -3.964 -8.646 12.569 1.00 7.56 ATOM 329 OXT CYS 41 -2.555 -8.139 8.807 1.00 7.56 TER END