####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS116_5 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS116_5.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 2.51 2.51 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 32 2 - 33 1.93 2.99 LCS_AVERAGE: 75.13 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 2 - 16 0.78 6.82 LCS_AVERAGE: 30.22 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 31 41 3 3 3 4 11 25 35 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Q 2 Q 2 15 32 41 10 13 18 24 29 32 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 3 E 3 15 32 41 10 13 18 24 28 32 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 4 T 4 15 32 41 10 13 18 24 29 32 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 5 R 5 15 32 41 10 13 18 24 29 32 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 6 K 6 15 32 41 10 13 18 24 29 32 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 7 K 7 15 32 41 10 13 18 24 29 32 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 8 C 8 15 32 41 10 13 14 21 29 32 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 9 T 9 15 32 41 10 13 14 24 29 32 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 10 E 10 15 32 41 10 13 18 24 29 32 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT M 11 M 11 15 32 41 10 13 14 24 29 32 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 12 K 12 15 32 41 10 13 14 21 29 32 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 13 K 13 15 32 41 10 13 18 24 29 32 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 14 K 14 15 32 41 10 13 16 24 29 32 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT F 15 F 15 15 32 41 5 13 14 18 28 31 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 16 K 16 15 32 41 4 7 14 17 22 30 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 17 N 17 4 32 41 5 10 18 24 29 32 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 18 C 18 6 32 41 5 10 18 24 29 32 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 19 E 19 6 32 41 3 8 16 20 29 32 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 20 V 20 6 32 41 6 10 18 24 29 32 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 21 R 21 6 32 41 6 10 18 24 29 32 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 22 C 22 8 32 41 4 5 12 18 28 32 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 23 D 23 8 32 41 4 7 11 18 28 31 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 24 E 24 8 32 41 3 7 10 16 26 31 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 25 S 25 9 32 41 6 10 16 24 29 32 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 26 N 26 9 32 41 3 7 13 24 29 32 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT H 27 H 27 14 32 41 5 10 18 24 29 32 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 28 C 28 14 32 41 6 10 18 24 29 32 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 29 V 29 14 32 41 5 10 18 24 29 32 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 30 E 30 14 32 41 6 10 18 24 29 32 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 31 V 31 14 32 41 6 10 18 24 29 32 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 32 R 32 14 32 41 5 10 18 24 29 32 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 33 C 33 14 32 41 5 10 18 24 29 32 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 34 S 34 14 26 41 5 10 16 20 26 32 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 35 D 35 14 26 41 3 8 16 20 26 32 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 36 T 36 14 26 41 3 4 13 19 24 29 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 37 K 37 14 26 41 5 10 16 20 29 32 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Y 38 Y 38 14 26 41 4 10 16 20 29 32 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 39 T 39 14 26 41 4 9 16 20 29 32 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT L 40 L 40 14 26 41 5 10 16 20 23 29 36 40 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 41 C 41 14 26 41 4 8 15 18 23 29 34 39 41 41 41 41 41 41 41 41 41 41 41 41 LCS_AVERAGE LCS_A: 68.45 ( 30.22 75.13 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 13 18 24 29 32 36 40 41 41 41 41 41 41 41 41 41 41 41 41 GDT PERCENT_AT 24.39 31.71 43.90 58.54 70.73 78.05 87.80 97.56 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.32 0.47 1.16 1.42 1.81 1.96 2.19 2.43 2.51 2.51 2.51 2.51 2.51 2.51 2.51 2.51 2.51 2.51 2.51 2.51 GDT RMS_ALL_AT 6.80 7.11 3.04 2.95 2.62 2.61 2.57 2.52 2.51 2.51 2.51 2.51 2.51 2.51 2.51 2.51 2.51 2.51 2.51 2.51 # Checking swapping # possible swapping detected: E 3 E 3 # possible swapping detected: E 10 E 10 # possible swapping detected: D 23 D 23 # possible swapping detected: E 24 E 24 # possible swapping detected: E 30 E 30 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 3.900 0 0.119 0.171 5.779 5.455 5.455 4.415 LGA Q 2 Q 2 2.452 0 0.245 1.497 5.038 35.455 30.303 2.522 LGA E 3 E 3 3.122 0 0.063 1.348 8.619 25.000 12.323 6.180 LGA T 4 T 4 2.074 0 0.036 1.054 3.780 48.182 38.442 2.790 LGA R 5 R 5 0.982 0 0.059 0.964 6.424 73.636 37.851 5.013 LGA K 6 K 6 2.038 0 0.041 1.242 11.219 51.364 26.061 11.219 LGA K 7 K 7 2.267 0 0.050 0.785 4.780 44.545 28.485 3.502 LGA C 8 C 8 2.065 0 0.048 0.096 3.888 47.727 38.182 3.888 LGA T 9 T 9 1.806 0 0.042 1.052 3.911 58.182 45.974 3.911 LGA E 10 E 10 2.069 0 0.036 0.878 8.130 51.364 26.061 8.064 LGA M 11 M 11 2.284 0 0.071 1.362 3.698 44.545 36.591 3.698 LGA K 12 K 12 2.267 0 0.054 0.813 5.304 44.545 29.293 5.304 LGA K 13 K 13 2.039 0 0.041 1.279 3.178 51.364 38.788 3.178 LGA K 14 K 14 2.423 0 0.052 1.448 8.366 38.636 21.212 8.366 LGA F 15 F 15 3.205 0 0.520 0.839 6.256 15.455 21.488 2.613 LGA K 16 K 16 3.679 0 0.530 0.999 6.366 25.909 12.121 6.366 LGA N 17 N 17 0.637 0 0.041 1.092 4.045 66.364 48.409 2.523 LGA C 18 C 18 1.411 0 0.059 0.115 1.700 62.273 58.485 1.535 LGA E 19 E 19 2.155 0 0.335 0.825 5.475 47.727 26.263 4.454 LGA V 20 V 20 1.362 0 0.139 1.142 4.292 58.182 51.169 0.506 LGA R 21 R 21 1.592 0 0.140 1.275 4.044 58.182 44.959 4.044 LGA C 22 C 22 3.077 0 0.043 0.164 3.918 20.455 17.273 3.918 LGA D 23 D 23 3.662 0 0.201 0.454 4.686 11.364 10.909 3.467 LGA E 24 E 24 3.591 0 0.117 0.893 7.610 23.636 11.111 7.610 LGA S 25 S 25 2.229 0 0.206 0.709 5.816 49.091 34.545 5.816 LGA N 26 N 26 2.467 0 0.696 0.986 8.359 51.818 26.591 7.780 LGA H 27 H 27 0.930 0 0.417 0.694 2.058 62.273 57.273 1.362 LGA C 28 C 28 1.282 0 0.183 0.213 1.930 61.818 65.758 1.067 LGA V 29 V 29 1.757 0 0.129 0.149 2.378 50.909 45.455 2.378 LGA E 30 E 30 1.286 0 0.043 0.766 4.863 61.818 41.212 2.699 LGA V 31 V 31 1.613 0 0.029 0.100 1.692 61.818 59.221 1.463 LGA R 32 R 32 1.681 0 0.280 0.827 6.062 39.545 31.405 6.062 LGA C 33 C 33 1.046 0 0.519 0.873 2.481 62.727 61.818 2.481 LGA S 34 S 34 3.022 0 0.152 0.746 3.408 23.182 26.970 1.607 LGA D 35 D 35 3.057 0 0.149 1.206 4.250 17.273 27.045 1.638 LGA T 36 T 36 3.962 0 0.195 1.084 7.058 32.727 18.961 7.058 LGA K 37 K 37 2.356 0 0.137 0.952 5.103 33.182 26.667 5.103 LGA Y 38 Y 38 1.860 0 0.062 1.078 7.721 50.909 23.636 7.721 LGA T 39 T 39 2.392 0 0.181 1.028 4.074 32.727 30.390 2.441 LGA L 40 L 40 3.766 0 0.161 1.038 5.237 9.091 11.591 2.932 LGA C 41 C 41 4.847 0 0.327 0.989 6.225 2.273 3.377 4.962 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 2.513 2.494 3.474 41.774 31.930 19.956 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 40 2.43 71.951 77.202 1.580 LGA_LOCAL RMSD: 2.432 Number of atoms: 40 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.519 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 2.513 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.978426 * X + -0.061649 * Y + 0.197187 * Z + 10.421567 Y_new = -0.145771 * X + 0.882354 * Y + -0.447440 * Z + 67.276093 Z_new = -0.146405 * X + -0.466531 * Y + -0.872304 * Z + -32.724476 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.993695 0.146933 -2.650474 [DEG: -171.5261 8.4186 -151.8610 ] ZXZ: 0.415094 2.630691 -2.837510 [DEG: 23.7831 150.7275 -162.5773 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS116_5 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS116_5.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 40 2.43 77.202 2.51 REMARK ---------------------------------------------------------- MOLECULE T0955TS116_5 PFRMAT TS TARGET T0955 MODEL 5 PARENT 3nuhB 3nuhB2 2nwvA 2id1A 2nvwA3 ATOM 1 N SER 1 -2.513 -10.937 -0.928 1.00 17.26 N ATOM 2 CA SER 1 -1.979 -11.828 0.124 1.00 17.26 C ATOM 3 CB SER 1 -0.575 -12.340 -0.252 1.00 17.26 C ATOM 4 OG SER 1 -0.643 -13.184 -1.391 1.00 17.26 O ATOM 5 C SER 1 -1.866 -11.093 1.415 1.00 17.26 C ATOM 6 O SER 1 -1.859 -9.864 1.444 1.00 17.26 O ATOM 7 N GLN 2 -1.821 -11.833 2.537 1.00 78.47 N ATOM 8 CA GLN 2 -1.643 -11.152 3.781 1.00 78.47 C ATOM 9 CB GLN 2 -1.721 -12.045 5.035 1.00 78.47 C ATOM 10 CG GLN 2 -3.140 -12.441 5.444 1.00 78.47 C ATOM 11 CD GLN 2 -3.684 -13.405 4.408 1.00 78.47 C ATOM 12 OE1 GLN 2 -2.998 -14.331 3.977 1.00 78.47 O ATOM 13 NE2 GLN 2 -4.959 -13.175 3.995 1.00 78.47 N ATOM 14 C GLN 2 -0.286 -10.544 3.766 1.00 78.47 C ATOM 15 O GLN 2 -0.101 -9.429 4.243 1.00 78.47 O ATOM 16 N GLU 3 0.702 -11.277 3.217 1.00 78.45 N ATOM 17 CA GLU 3 2.057 -10.813 3.219 1.00 78.45 C ATOM 18 CB GLU 3 3.057 -11.868 2.707 1.00 78.45 C ATOM 19 CG GLU 3 4.516 -11.415 2.825 1.00 78.45 C ATOM 20 CD GLU 3 5.424 -12.632 2.687 1.00 78.45 C ATOM 21 OE1 GLU 3 5.240 -13.408 1.712 1.00 78.45 O ATOM 22 OE2 GLU 3 6.325 -12.794 3.554 1.00 78.45 O ATOM 23 C GLU 3 2.184 -9.566 2.397 1.00 78.45 C ATOM 24 O GLU 3 2.890 -8.638 2.796 1.00 78.45 O ATOM 25 N THR 4 1.500 -9.503 1.236 1.00101.41 N ATOM 26 CA THR 4 1.596 -8.360 0.367 1.00101.41 C ATOM 27 CB THR 4 0.855 -8.523 -0.928 1.00101.41 C ATOM 28 OG1 THR 4 -0.528 -8.724 -0.688 1.00101.41 O ATOM 29 CG2 THR 4 1.455 -9.718 -1.687 1.00101.41 C ATOM 30 C THR 4 1.055 -7.151 1.049 1.00101.41 C ATOM 31 O THR 4 1.629 -6.069 0.943 1.00101.41 O ATOM 32 N ARG 5 -0.072 -7.313 1.764 1.00130.51 N ATOM 33 CA ARG 5 -0.735 -6.230 2.430 1.00130.51 C ATOM 34 CB ARG 5 -2.024 -6.717 3.108 1.00130.51 C ATOM 35 CG ARG 5 -2.823 -5.656 3.857 1.00130.51 C ATOM 36 CD ARG 5 -4.209 -6.182 4.227 1.00130.51 C ATOM 37 NE ARG 5 -4.833 -6.615 2.944 1.00130.51 N ATOM 38 CZ ARG 5 -6.168 -6.441 2.735 1.00130.51 C ATOM 39 NH1 ARG 5 -6.935 -5.913 3.732 1.00130.51 N ATOM 40 NH2 ARG 5 -6.727 -6.783 1.537 1.00130.51 N ATOM 41 C ARG 5 0.159 -5.662 3.478 1.00130.51 C ATOM 42 O ARG 5 0.242 -4.443 3.610 1.00130.51 O ATOM 43 N LYS 6 0.854 -6.538 4.238 1.00 96.64 N ATOM 44 CA LYS 6 1.731 -6.129 5.306 1.00 96.64 C ATOM 45 CB LYS 6 2.453 -7.327 5.948 1.00 96.64 C ATOM 46 CG LYS 6 1.575 -8.266 6.772 1.00 96.64 C ATOM 47 CD LYS 6 1.057 -7.614 8.049 1.00 96.64 C ATOM 48 CE LYS 6 0.323 -8.587 8.965 1.00 96.64 C ATOM 49 NZ LYS 6 -0.042 -7.899 10.220 1.00 96.64 N ATOM 50 C LYS 6 2.840 -5.310 4.744 1.00 96.64 C ATOM 51 O LYS 6 3.226 -4.302 5.330 1.00 96.64 O ATOM 52 N LYS 7 3.403 -5.750 3.602 1.00 99.87 N ATOM 53 CA LYS 7 4.533 -5.055 3.060 1.00 99.87 C ATOM 54 CB LYS 7 5.125 -5.745 1.821 1.00 99.87 C ATOM 55 CG LYS 7 6.462 -5.135 1.408 1.00 99.87 C ATOM 56 CD LYS 7 7.220 -5.960 0.371 1.00 99.87 C ATOM 57 CE LYS 7 7.052 -5.420 -1.048 1.00 99.87 C ATOM 58 NZ LYS 7 7.682 -6.339 -2.020 1.00 99.87 N ATOM 59 C LYS 7 4.136 -3.679 2.656 1.00 99.87 C ATOM 60 O LYS 7 4.885 -2.723 2.876 1.00 99.87 O ATOM 61 N CYS 8 2.947 -3.546 2.041 1.00123.87 N ATOM 62 CA CYS 8 2.527 -2.262 1.560 1.00123.87 C ATOM 63 CB CYS 8 1.208 -2.329 0.789 1.00123.87 C ATOM 64 SG CYS 8 0.734 -0.692 0.179 1.00123.87 S ATOM 65 C CYS 8 2.343 -1.317 2.705 1.00123.87 C ATOM 66 O CYS 8 2.705 -0.140 2.606 1.00123.87 O ATOM 67 N THR 9 1.764 -1.810 3.821 1.00113.54 N ATOM 68 CA THR 9 1.504 -0.951 4.947 1.00113.54 C ATOM 69 CB THR 9 0.729 -1.589 6.066 1.00113.54 C ATOM 70 OG1 THR 9 0.297 -0.595 6.984 1.00113.54 O ATOM 71 CG2 THR 9 1.613 -2.624 6.779 1.00113.54 C ATOM 72 C THR 9 2.790 -0.444 5.519 1.00113.54 C ATOM 73 O THR 9 2.868 0.719 5.911 1.00113.54 O ATOM 74 N GLU 10 3.823 -1.310 5.597 1.00 70.58 N ATOM 75 CA GLU 10 5.095 -0.943 6.166 1.00 70.58 C ATOM 76 CB GLU 10 6.084 -2.120 6.168 1.00 70.58 C ATOM 77 CG GLU 10 5.612 -3.343 6.961 1.00 70.58 C ATOM 78 CD GLU 10 6.041 -3.200 8.412 1.00 70.58 C ATOM 79 OE1 GLU 10 7.276 -3.159 8.663 1.00 70.58 O ATOM 80 OE2 GLU 10 5.139 -3.124 9.288 1.00 70.58 O ATOM 81 C GLU 10 5.723 0.129 5.326 1.00 70.58 C ATOM 82 O GLU 10 6.310 1.074 5.857 1.00 70.58 O ATOM 83 N MET 11 5.624 0.002 3.985 1.00116.88 N ATOM 84 CA MET 11 6.231 0.992 3.133 1.00116.88 C ATOM 85 CB MET 11 6.073 0.747 1.621 1.00116.88 C ATOM 86 CG MET 11 6.538 1.965 0.808 1.00116.88 C ATOM 87 SD MET 11 6.039 1.966 -0.940 1.00116.88 S ATOM 88 CE MET 11 6.428 3.719 -1.219 1.00116.88 C ATOM 89 C MET 11 5.581 2.319 3.351 1.00116.88 C ATOM 90 O MET 11 6.261 3.341 3.382 1.00116.88 O ATOM 91 N LYS 12 4.238 2.333 3.485 1.00115.45 N ATOM 92 CA LYS 12 3.564 3.592 3.607 1.00115.45 C ATOM 93 CB LYS 12 2.031 3.492 3.693 1.00115.45 C ATOM 94 CG LYS 12 1.510 2.969 5.037 1.00115.45 C ATOM 95 CD LYS 12 0.080 3.425 5.340 1.00115.45 C ATOM 96 CE LYS 12 0.025 4.797 6.025 1.00115.45 C ATOM 97 NZ LYS 12 -1.373 5.280 6.109 1.00115.45 N ATOM 98 C LYS 12 3.987 4.276 4.867 1.00115.45 C ATOM 99 O LYS 12 4.168 5.494 4.878 1.00115.45 O ATOM 100 N LYS 13 4.120 3.500 5.966 1.00106.86 N ATOM 101 CA LYS 13 4.449 4.088 7.233 1.00106.86 C ATOM 102 CB LYS 13 4.428 3.088 8.411 1.00106.86 C ATOM 103 CG LYS 13 5.423 1.931 8.302 1.00106.86 C ATOM 104 CD LYS 13 5.662 1.181 9.615 1.00106.86 C ATOM 105 CE LYS 13 6.537 -0.068 9.458 1.00106.86 C ATOM 106 NZ LYS 13 7.862 0.307 8.914 1.00106.86 N ATOM 107 C LYS 13 5.806 4.704 7.167 1.00106.86 C ATOM 108 O LYS 13 6.039 5.792 7.696 1.00106.86 O ATOM 109 N LYS 14 6.755 4.010 6.520 1.00122.95 N ATOM 110 CA LYS 14 8.080 4.550 6.463 1.00122.95 C ATOM 111 CB LYS 14 9.076 3.583 5.801 1.00122.95 C ATOM 112 CG LYS 14 10.466 4.188 5.614 1.00122.95 C ATOM 113 CD LYS 14 11.157 4.607 6.912 1.00122.95 C ATOM 114 CE LYS 14 12.442 5.403 6.674 1.00122.95 C ATOM 115 NZ LYS 14 12.894 6.024 7.938 1.00122.95 N ATOM 116 C LYS 14 8.094 5.838 5.698 1.00122.95 C ATOM 117 O LYS 14 8.769 6.794 6.093 1.00122.95 O ATOM 118 N PHE 15 7.380 5.888 4.554 1.00163.26 N ATOM 119 CA PHE 15 7.433 7.074 3.742 1.00163.26 C ATOM 120 CB PHE 15 6.789 6.880 2.359 1.00163.26 C ATOM 121 CG PHE 15 7.765 6.103 1.545 1.00163.26 C ATOM 122 CD1 PHE 15 7.835 4.734 1.635 1.00163.26 C ATOM 123 CD2 PHE 15 8.623 6.754 0.691 1.00163.26 C ATOM 124 CE1 PHE 15 8.740 4.018 0.886 1.00163.26 C ATOM 125 CE2 PHE 15 9.529 6.043 -0.059 1.00163.26 C ATOM 126 CZ PHE 15 9.595 4.674 0.037 1.00163.26 C ATOM 127 C PHE 15 6.842 8.324 4.334 1.00163.26 C ATOM 128 O PHE 15 7.567 9.308 4.455 1.00163.26 O ATOM 129 N LYS 16 5.563 8.321 4.791 1.00315.83 N ATOM 130 CA LYS 16 4.954 9.582 5.173 1.00315.83 C ATOM 131 CB LYS 16 5.274 10.776 4.245 1.00315.83 C ATOM 132 CG LYS 16 6.361 11.734 4.735 1.00315.83 C ATOM 133 CD LYS 16 5.933 12.519 5.973 1.00315.83 C ATOM 134 CE LYS 16 4.754 13.459 5.702 1.00315.83 C ATOM 135 NZ LYS 16 4.382 14.194 6.930 1.00315.83 N ATOM 136 C LYS 16 3.451 9.505 5.114 1.00315.83 C ATOM 137 O LYS 16 2.821 8.583 5.628 1.00315.83 O ATOM 138 N ASN 17 2.860 10.542 4.468 1.00106.91 N ATOM 139 CA ASN 17 1.453 10.814 4.283 1.00106.91 C ATOM 140 CB ASN 17 1.188 12.099 3.488 1.00106.91 C ATOM 141 CG ASN 17 1.455 13.296 4.378 1.00106.91 C ATOM 142 OD1 ASN 17 2.298 14.137 4.072 1.00106.91 O ATOM 143 ND2 ASN 17 0.704 13.389 5.508 1.00106.91 N ATOM 144 C ASN 17 0.826 9.713 3.504 1.00106.91 C ATOM 145 O ASN 17 -0.362 9.438 3.670 1.00106.91 O ATOM 146 N CYS 18 1.612 9.066 2.627 1.00 76.35 N ATOM 147 CA CYS 18 1.081 8.099 1.715 1.00 76.35 C ATOM 148 CB CYS 18 2.159 7.302 0.963 1.00 76.35 C ATOM 149 SG CYS 18 3.179 8.339 -0.127 1.00 76.35 S ATOM 150 C CYS 18 0.240 7.088 2.421 1.00 76.35 C ATOM 151 O CYS 18 0.546 6.661 3.535 1.00 76.35 O ATOM 152 N GLU 19 -0.876 6.709 1.763 1.00203.43 N ATOM 153 CA GLU 19 -1.777 5.723 2.282 1.00203.43 C ATOM 154 CB GLU 19 -3.240 6.178 2.404 1.00203.43 C ATOM 155 CG GLU 19 -3.488 7.144 3.563 1.00203.43 C ATOM 156 CD GLU 19 -4.968 7.047 3.909 1.00203.43 C ATOM 157 OE1 GLU 19 -5.398 5.945 4.344 1.00203.43 O ATOM 158 OE2 GLU 19 -5.687 8.068 3.735 1.00203.43 O ATOM 159 C GLU 19 -1.735 4.557 1.353 1.00203.43 C ATOM 160 O GLU 19 -1.392 4.696 0.181 1.00203.43 O ATOM 161 N VAL 20 -2.072 3.361 1.867 1.00151.31 N ATOM 162 CA VAL 20 -1.928 2.174 1.078 1.00151.31 C ATOM 163 CB VAL 20 -1.089 1.164 1.779 1.00151.31 C ATOM 164 CG1 VAL 20 0.308 1.769 1.990 1.00151.31 C ATOM 165 CG2 VAL 20 -1.801 0.780 3.086 1.00151.31 C ATOM 166 C VAL 20 -3.261 1.538 0.862 1.00151.31 C ATOM 167 O VAL 20 -4.129 1.552 1.734 1.00151.31 O ATOM 168 N ARG 21 -3.449 0.957 -0.339 1.00294.43 N ATOM 169 CA ARG 21 -4.675 0.298 -0.667 1.00294.43 C ATOM 170 CB ARG 21 -5.565 1.128 -1.611 1.00294.43 C ATOM 171 CG ARG 21 -7.035 0.718 -1.568 1.00294.43 C ATOM 172 CD ARG 21 -7.878 1.300 -2.704 1.00294.43 C ATOM 173 NE ARG 21 -7.831 2.789 -2.618 1.00294.43 N ATOM 174 CZ ARG 21 -8.869 3.524 -3.114 1.00294.43 C ATOM 175 NH1 ARG 21 -9.957 2.889 -3.638 1.00294.43 N ATOM 176 NH2 ARG 21 -8.823 4.889 -3.083 1.00294.43 N ATOM 177 C ARG 21 -4.294 -0.971 -1.367 1.00294.43 C ATOM 178 O ARG 21 -3.216 -1.066 -1.951 1.00294.43 O ATOM 179 N CYS 22 -5.164 -1.997 -1.305 1.00 81.61 N ATOM 180 CA CYS 22 -4.829 -3.248 -1.924 1.00 81.61 C ATOM 181 CB CYS 22 -4.884 -4.447 -0.964 1.00 81.61 C ATOM 182 SG CYS 22 -3.636 -4.365 0.350 1.00 81.61 S ATOM 183 C CYS 22 -5.832 -3.542 -2.992 1.00 81.61 C ATOM 184 O CYS 22 -6.968 -3.073 -2.951 1.00 81.61 O ATOM 185 N ASP 23 -5.410 -4.329 -3.998 1.00153.01 N ATOM 186 CA ASP 23 -6.313 -4.724 -5.032 1.00153.01 C ATOM 187 CB ASP 23 -5.660 -4.850 -6.418 1.00153.01 C ATOM 188 CG ASP 23 -5.426 -3.447 -6.955 1.00153.01 C ATOM 189 OD1 ASP 23 -6.409 -2.659 -6.997 1.00153.01 O ATOM 190 OD2 ASP 23 -4.261 -3.141 -7.321 1.00153.01 O ATOM 191 C ASP 23 -6.807 -6.081 -4.649 1.00153.01 C ATOM 192 O ASP 23 -6.030 -7.001 -4.395 1.00153.01 O ATOM 193 N GLU 24 -8.140 -6.209 -4.560 1.00 77.95 N ATOM 194 CA GLU 24 -8.765 -7.423 -4.137 1.00 77.95 C ATOM 195 CB GLU 24 -10.280 -7.246 -3.945 1.00 77.95 C ATOM 196 CG GLU 24 -10.658 -6.248 -2.848 1.00 77.95 C ATOM 197 CD GLU 24 -12.162 -6.032 -2.911 1.00 77.95 C ATOM 198 OE1 GLU 24 -12.616 -5.298 -3.829 1.00 77.95 O ATOM 199 OE2 GLU 24 -12.879 -6.597 -2.044 1.00 77.95 O ATOM 200 C GLU 24 -8.586 -8.527 -5.136 1.00 77.95 C ATOM 201 O GLU 24 -8.175 -9.623 -4.763 1.00 77.95 O ATOM 202 N SER 25 -8.865 -8.270 -6.434 1.00130.57 N ATOM 203 CA SER 25 -8.870 -9.354 -7.382 1.00130.57 C ATOM 204 CB SER 25 -9.162 -8.917 -8.827 1.00130.57 C ATOM 205 OG SER 25 -9.131 -10.052 -9.682 1.00130.57 O ATOM 206 C SER 25 -7.546 -10.027 -7.402 1.00130.57 C ATOM 207 O SER 25 -7.350 -11.049 -6.750 1.00130.57 O ATOM 208 N ASN 26 -6.585 -9.451 -8.142 1.00185.56 N ATOM 209 CA ASN 26 -5.284 -10.038 -8.186 1.00185.56 C ATOM 210 CB ASN 26 -4.592 -9.886 -9.551 1.00185.56 C ATOM 211 CG ASN 26 -5.334 -10.733 -10.578 1.00185.56 C ATOM 212 OD1 ASN 26 -5.310 -10.441 -11.772 1.00185.56 O ATOM 213 ND2 ASN 26 -6.003 -11.818 -10.110 1.00185.56 N ATOM 214 C ASN 26 -4.522 -9.239 -7.186 1.00185.56 C ATOM 215 O ASN 26 -4.593 -8.009 -7.180 1.00185.56 O ATOM 216 N HIS 27 -3.781 -9.915 -6.297 1.00 77.60 N ATOM 217 CA HIS 27 -3.155 -9.176 -5.249 1.00 77.60 C ATOM 218 ND1 HIS 27 -4.427 -11.215 -3.245 1.00 77.60 N ATOM 219 CG HIS 27 -3.189 -11.266 -3.851 1.00 77.60 C ATOM 220 CB HIS 27 -2.386 -10.069 -4.267 1.00 77.60 C ATOM 221 NE2 HIS 27 -3.926 -13.370 -3.483 1.00 77.60 N ATOM 222 CD2 HIS 27 -2.900 -12.589 -3.985 1.00 77.60 C ATOM 223 CE1 HIS 27 -4.820 -12.499 -3.049 1.00 77.60 C ATOM 224 C HIS 27 -2.192 -8.216 -5.866 1.00 77.60 C ATOM 225 O HIS 27 -1.172 -8.605 -6.435 1.00 77.60 O ATOM 226 N CYS 28 -2.525 -6.916 -5.763 1.00 36.97 N ATOM 227 CA CYS 28 -1.690 -5.865 -6.254 1.00 36.97 C ATOM 228 CB CYS 28 -2.290 -5.089 -7.438 1.00 36.97 C ATOM 229 SG CYS 28 -2.363 -6.082 -8.958 1.00 36.97 S ATOM 230 C CYS 28 -1.542 -4.906 -5.126 1.00 36.97 C ATOM 231 O CYS 28 -2.310 -4.943 -4.165 1.00 36.97 O ATOM 232 N VAL 29 -0.522 -4.035 -5.193 1.00 57.69 N ATOM 233 CA VAL 29 -0.356 -3.094 -4.130 1.00 57.69 C ATOM 234 CB VAL 29 1.006 -3.167 -3.505 1.00 57.69 C ATOM 235 CG1 VAL 29 1.183 -1.964 -2.571 1.00 57.69 C ATOM 236 CG2 VAL 29 1.130 -4.527 -2.790 1.00 57.69 C ATOM 237 C VAL 29 -0.558 -1.735 -4.709 1.00 57.69 C ATOM 238 O VAL 29 -0.101 -1.441 -5.813 1.00 57.69 O ATOM 239 N GLU 30 -1.296 -0.879 -3.973 1.00169.89 N ATOM 240 CA GLU 30 -1.567 0.453 -4.432 1.00169.89 C ATOM 241 CB GLU 30 -3.068 0.805 -4.424 1.00169.89 C ATOM 242 CG GLU 30 -3.929 0.015 -5.413 1.00169.89 C ATOM 243 CD GLU 30 -5.392 0.278 -5.071 1.00169.89 C ATOM 244 OE1 GLU 30 -5.777 1.473 -4.975 1.00169.89 O ATOM 245 OE2 GLU 30 -6.145 -0.713 -4.882 1.00169.89 O ATOM 246 C GLU 30 -0.943 1.388 -3.451 1.00169.89 C ATOM 247 O GLU 30 -1.061 1.202 -2.242 1.00169.89 O ATOM 248 N VAL 31 -0.236 2.420 -3.947 1.00 55.92 N ATOM 249 CA VAL 31 0.294 3.373 -3.024 1.00 55.92 C ATOM 250 CB VAL 31 1.779 3.551 -3.090 1.00 55.92 C ATOM 251 CG1 VAL 31 2.152 4.712 -2.154 1.00 55.92 C ATOM 252 CG2 VAL 31 2.448 2.215 -2.725 1.00 55.92 C ATOM 253 C VAL 31 -0.311 4.676 -3.389 1.00 55.92 C ATOM 254 O VAL 31 -0.392 5.028 -4.564 1.00 55.92 O ATOM 255 N ARG 32 -0.774 5.429 -2.379 1.00152.64 N ATOM 256 CA ARG 32 -1.345 6.693 -2.705 1.00152.64 C ATOM 257 CB ARG 32 -2.850 6.827 -2.431 1.00152.64 C ATOM 258 CG ARG 32 -3.360 8.220 -2.812 1.00152.64 C ATOM 259 CD ARG 32 -4.854 8.449 -2.576 1.00152.64 C ATOM 260 NE ARG 32 -5.191 7.908 -1.232 1.00152.64 N ATOM 261 CZ ARG 32 -6.005 8.631 -0.412 1.00152.64 C ATOM 262 NH1 ARG 32 -6.490 9.833 -0.835 1.00152.64 N ATOM 263 NH2 ARG 32 -6.319 8.175 0.835 1.00152.64 N ATOM 264 C ARG 32 -0.657 7.729 -1.888 1.00152.64 C ATOM 265 O ARG 32 -0.200 7.477 -0.774 1.00152.64 O ATOM 266 N CYS 33 -0.550 8.928 -2.474 1.00 90.56 N ATOM 267 CA CYS 33 0.048 10.059 -1.851 1.00 90.56 C ATOM 268 CB CYS 33 1.032 10.796 -2.775 1.00 90.56 C ATOM 269 SG CYS 33 1.793 12.244 -1.985 1.00 90.56 S ATOM 270 C CYS 33 -1.094 10.972 -1.617 1.00 90.56 C ATOM 271 O CYS 33 -2.174 10.764 -2.171 1.00 90.56 O ATOM 272 N SER 34 -0.905 11.984 -0.757 1.00133.75 N ATOM 273 CA SER 34 -1.985 12.893 -0.559 1.00133.75 C ATOM 274 CB SER 34 -1.637 14.031 0.410 1.00133.75 C ATOM 275 OG SER 34 -0.622 14.851 -0.152 1.00133.75 O ATOM 276 C SER 34 -2.207 13.491 -1.907 1.00133.75 C ATOM 277 O SER 34 -3.339 13.777 -2.302 1.00133.75 O ATOM 278 N ASP 35 -1.099 13.668 -2.653 1.00123.65 N ATOM 279 CA ASP 35 -1.178 14.247 -3.955 1.00123.65 C ATOM 280 CB ASP 35 0.204 14.375 -4.619 1.00123.65 C ATOM 281 CG ASP 35 0.069 15.243 -5.864 1.00123.65 C ATOM 282 OD1 ASP 35 -0.982 15.929 -6.001 1.00123.65 O ATOM 283 OD2 ASP 35 1.012 15.230 -6.698 1.00123.65 O ATOM 284 C ASP 35 -2.011 13.359 -4.834 1.00123.65 C ATOM 285 O ASP 35 -3.011 13.811 -5.389 1.00123.65 O ATOM 286 N THR 36 -1.649 12.064 -4.980 1.00296.77 N ATOM 287 CA THR 36 -2.443 11.225 -5.840 1.00296.77 C ATOM 288 CB THR 36 -2.234 11.487 -7.300 1.00296.77 C ATOM 289 OG1 THR 36 -3.190 10.766 -8.063 1.00296.77 O ATOM 290 CG2 THR 36 -0.809 11.047 -7.677 1.00296.77 C ATOM 291 C THR 36 -2.077 9.794 -5.601 1.00296.77 C ATOM 292 O THR 36 -1.069 9.503 -4.964 1.00296.77 O ATOM 293 N LYS 37 -2.893 8.858 -6.132 1.00280.93 N ATOM 294 CA LYS 37 -2.658 7.452 -5.944 1.00280.93 C ATOM 295 CB LYS 37 -3.948 6.647 -5.721 1.00280.93 C ATOM 296 CG LYS 37 -4.917 6.772 -6.898 1.00280.93 C ATOM 297 CD LYS 37 -6.047 5.743 -6.899 1.00280.93 C ATOM 298 CE LYS 37 -7.020 5.921 -8.067 1.00280.93 C ATOM 299 NZ LYS 37 -7.961 4.778 -8.127 1.00280.93 N ATOM 300 C LYS 37 -2.012 6.894 -7.168 1.00280.93 C ATOM 301 O LYS 37 -2.199 7.398 -8.274 1.00280.93 O ATOM 302 N TYR 38 -1.203 5.833 -6.972 1.00339.03 N ATOM 303 CA TYR 38 -0.558 5.142 -8.049 1.00339.03 C ATOM 304 CB TYR 38 0.978 5.232 -8.020 1.00339.03 C ATOM 305 CG TYR 38 1.384 6.663 -8.133 1.00339.03 C ATOM 306 CD1 TYR 38 1.503 7.443 -7.005 1.00339.03 C ATOM 307 CD2 TYR 38 1.644 7.226 -9.360 1.00339.03 C ATOM 308 CE1 TYR 38 1.881 8.763 -7.104 1.00339.03 C ATOM 309 CE2 TYR 38 2.022 8.544 -9.466 1.00339.03 C ATOM 310 CZ TYR 38 2.141 9.315 -8.336 1.00339.03 C ATOM 311 OH TYR 38 2.529 10.667 -8.447 1.00339.03 O ATOM 312 C TYR 38 -0.897 3.698 -7.865 1.00339.03 C ATOM 313 O TYR 38 -1.015 3.230 -6.734 1.00339.03 O ATOM 314 N THR 39 -1.079 2.951 -8.972 1.00310.80 N ATOM 315 CA THR 39 -1.415 1.562 -8.834 1.00310.80 C ATOM 316 CB THR 39 -2.725 1.185 -9.465 1.00310.80 C ATOM 317 OG1 THR 39 -3.053 -0.153 -9.128 1.00310.80 O ATOM 318 CG2 THR 39 -2.619 1.333 -10.991 1.00310.80 C ATOM 319 C THR 39 -0.349 0.752 -9.492 1.00310.80 C ATOM 320 O THR 39 0.249 1.165 -10.485 1.00310.80 O ATOM 321 N LEU 40 -0.073 -0.434 -8.920 1.00205.78 N ATOM 322 CA LEU 40 0.938 -1.294 -9.449 1.00205.78 C ATOM 323 CB LEU 40 1.842 -1.894 -8.364 1.00205.78 C ATOM 324 CG LEU 40 2.601 -0.837 -7.539 1.00205.78 C ATOM 325 CD1 LEU 40 3.495 -1.498 -6.476 1.00205.78 C ATOM 326 CD2 LEU 40 3.373 0.139 -8.439 1.00205.78 C ATOM 327 C LEU 40 0.233 -2.431 -10.109 1.00205.78 C ATOM 328 O LEU 40 -0.769 -2.931 -9.601 1.00205.78 O ATOM 329 N CYS 41 0.719 -2.858 -11.289 1.00 77.31 N ATOM 330 CA CYS 41 0.070 -3.971 -11.907 1.00 77.31 C ATOM 331 CB CYS 41 -0.022 -3.889 -13.440 1.00 77.31 C ATOM 332 SG CYS 41 -0.857 -5.343 -14.157 1.00 77.31 S ATOM 333 C CYS 41 0.896 -5.210 -11.581 1.00 77.31 C ATOM 334 O CYS 41 0.387 -6.341 -11.787 1.00 77.31 O ATOM 335 OXT CYS 41 2.049 -5.045 -11.104 1.00 77.31 O TER END