####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS116_4 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS116_4.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 2.47 2.47 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 17 - 41 1.90 3.05 LCS_AVERAGE: 58.06 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 2 - 16 0.80 6.58 LONGEST_CONTINUOUS_SEGMENT: 15 27 - 41 0.99 4.05 LCS_AVERAGE: 30.70 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 21 41 3 3 3 4 12 16 32 37 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Q 2 Q 2 15 22 41 10 13 14 21 28 33 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 3 E 3 15 22 41 10 13 14 20 27 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 4 T 4 15 22 41 10 13 15 22 28 33 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 5 R 5 15 22 41 10 13 14 22 28 33 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 6 K 6 15 22 41 10 13 14 21 28 33 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 7 K 7 15 22 41 10 13 14 22 28 33 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 8 C 8 15 22 41 10 13 17 22 28 33 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 9 T 9 15 22 41 10 13 14 22 28 33 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 10 E 10 15 22 41 10 13 14 22 28 33 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT M 11 M 11 15 22 41 10 13 14 22 28 33 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 12 K 12 15 22 41 10 13 14 20 28 33 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 13 K 13 15 22 41 10 13 14 22 28 33 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 14 K 14 15 22 41 10 13 14 22 28 33 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT F 15 F 15 15 22 41 5 13 14 17 27 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 16 K 16 15 22 41 4 4 11 16 22 28 32 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 17 N 17 4 25 41 3 9 17 22 28 33 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 18 C 18 7 25 41 4 12 17 22 28 33 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 19 E 19 7 25 41 6 12 17 22 28 33 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 20 V 20 7 25 41 4 12 16 22 28 33 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 21 R 21 7 25 41 4 12 16 22 28 33 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 22 C 22 7 25 41 3 7 16 20 27 33 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 23 D 23 7 25 41 4 7 14 19 25 32 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 24 E 24 7 25 41 3 4 14 19 25 32 35 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 25 S 25 5 25 41 3 8 16 22 28 33 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 26 N 26 5 25 41 3 4 5 9 18 22 32 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT H 27 H 27 15 25 41 6 12 17 22 28 33 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 28 C 28 15 25 41 6 12 17 22 28 33 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 29 V 29 15 25 41 6 12 17 22 28 33 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 30 E 30 15 25 41 6 12 17 22 28 33 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 31 V 31 15 25 41 6 12 17 22 28 33 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 32 R 32 15 25 41 6 12 17 22 28 33 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 33 C 33 15 25 41 6 12 17 22 28 33 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 34 S 34 15 25 41 3 12 16 22 28 33 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 35 D 35 15 25 41 3 4 16 20 28 33 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 36 T 36 15 25 41 3 9 17 20 28 33 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 37 K 37 15 25 41 5 12 17 22 28 33 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Y 38 Y 38 15 25 41 4 12 17 22 28 33 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 39 T 39 15 25 41 4 12 17 22 28 33 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT L 40 L 40 15 25 41 4 12 17 21 28 33 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 41 C 41 15 25 41 4 12 17 21 27 33 37 38 40 41 41 41 41 41 41 41 41 41 41 41 LCS_AVERAGE LCS_A: 62.92 ( 30.70 58.06 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 13 17 22 28 33 37 38 40 41 41 41 41 41 41 41 41 41 41 41 GDT PERCENT_AT 24.39 31.71 41.46 53.66 68.29 80.49 90.24 92.68 97.56 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.28 0.43 0.92 1.43 1.70 1.92 2.15 2.21 2.36 2.47 2.47 2.47 2.47 2.47 2.47 2.47 2.47 2.47 2.47 2.47 GDT RMS_ALL_AT 6.82 6.94 3.42 2.61 2.56 2.55 2.48 2.48 2.47 2.47 2.47 2.47 2.47 2.47 2.47 2.47 2.47 2.47 2.47 2.47 # Checking swapping # possible swapping detected: E 10 E 10 # possible swapping detected: D 23 D 23 # possible swapping detected: E 24 E 24 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 4.490 0 0.392 0.830 6.285 3.182 3.030 6.285 LGA Q 2 Q 2 3.097 0 0.250 1.074 3.623 22.727 25.859 3.623 LGA E 3 E 3 3.517 0 0.070 1.110 5.758 20.909 11.717 4.067 LGA T 4 T 4 2.040 0 0.039 0.209 2.960 48.182 44.156 2.960 LGA R 5 R 5 1.165 0 0.047 1.526 10.639 65.909 29.752 10.639 LGA K 6 K 6 2.428 0 0.047 1.285 11.197 47.727 22.626 11.197 LGA K 7 K 7 2.240 0 0.048 0.673 5.959 44.545 24.444 5.959 LGA C 8 C 8 2.032 0 0.052 0.100 4.274 51.364 39.697 4.274 LGA T 9 T 9 2.091 0 0.041 1.045 4.376 51.364 41.299 4.376 LGA E 10 E 10 1.957 0 0.037 0.627 6.004 54.545 28.485 5.510 LGA M 11 M 11 2.234 0 0.070 1.217 3.194 38.636 36.591 2.861 LGA K 12 K 12 2.801 0 0.048 0.753 3.814 32.727 24.242 3.814 LGA K 13 K 13 2.095 0 0.037 0.632 5.011 55.000 30.505 3.663 LGA K 14 K 14 1.855 0 0.054 0.656 3.451 45.455 35.960 1.762 LGA F 15 F 15 3.399 0 0.521 1.618 6.739 14.545 12.562 5.493 LGA K 16 K 16 4.573 0 0.589 1.406 9.122 12.273 5.455 9.122 LGA N 17 N 17 1.317 0 0.632 0.850 5.511 43.182 31.818 4.460 LGA C 18 C 18 1.140 0 0.064 0.811 3.684 78.182 62.424 3.684 LGA E 19 E 19 1.761 0 0.339 0.754 2.557 47.727 42.626 2.557 LGA V 20 V 20 1.441 0 0.131 1.151 4.790 58.182 41.558 3.090 LGA R 21 R 21 1.440 0 0.101 1.369 5.508 61.818 45.785 1.954 LGA C 22 C 22 2.760 0 0.057 0.142 3.727 32.727 26.667 3.727 LGA D 23 D 23 3.329 0 0.140 0.645 4.228 13.182 19.318 1.998 LGA E 24 E 24 3.684 0 0.665 0.809 5.925 12.273 6.869 5.925 LGA S 25 S 25 2.316 0 0.575 0.737 6.675 35.455 24.545 6.675 LGA N 26 N 26 5.009 0 0.183 1.165 10.269 5.455 2.727 10.264 LGA H 27 H 27 1.449 0 0.558 1.151 3.791 42.727 34.182 3.791 LGA C 28 C 28 1.505 0 0.138 0.154 3.336 48.636 41.818 3.336 LGA V 29 V 29 1.530 0 0.144 0.143 2.736 55.000 44.675 2.664 LGA E 30 E 30 1.112 0 0.040 0.372 2.788 65.455 59.596 1.125 LGA V 31 V 31 1.058 0 0.047 1.094 3.359 69.545 57.922 3.359 LGA R 32 R 32 1.289 0 0.269 0.649 2.847 52.273 49.091 1.893 LGA C 33 C 33 0.924 0 0.501 0.534 1.915 74.091 76.667 0.893 LGA S 34 S 34 2.552 0 0.121 0.145 2.905 30.000 29.091 2.905 LGA D 35 D 35 2.669 0 0.130 1.008 3.325 27.727 42.955 1.648 LGA T 36 T 36 3.146 0 0.226 1.091 6.326 44.091 27.532 6.326 LGA K 37 K 37 1.711 0 0.162 0.943 3.732 55.000 37.374 3.361 LGA Y 38 Y 38 1.087 0 0.049 1.366 7.915 65.455 35.758 7.915 LGA T 39 T 39 1.684 0 0.154 1.051 3.842 54.545 45.455 2.433 LGA L 40 L 40 2.227 0 0.127 0.248 3.242 30.455 32.955 2.693 LGA C 41 C 41 2.886 0 0.196 0.843 4.162 25.909 26.753 4.162 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 2.466 2.455 3.440 42.395 33.233 18.758 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 38 2.21 69.512 72.164 1.642 LGA_LOCAL RMSD: 2.214 Number of atoms: 38 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.481 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 2.466 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.437827 * X + -0.099329 * Y + 0.893555 * Z + -4.502855 Y_new = -0.243516 * X + 0.969829 * Y + -0.011511 * Z + 76.823135 Z_new = -0.865452 * X + -0.222635 * Y + -0.448805 * Z + -3.010449 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.634008 1.046052 -2.681102 [DEG: -150.9175 59.9344 -153.6158 ] ZXZ: 1.557915 2.036224 -1.822584 [DEG: 89.2619 116.6671 -104.4264 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS116_4 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS116_4.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 38 2.21 72.164 2.47 REMARK ---------------------------------------------------------- MOLECULE T0955TS116_4 PFRMAT TS TARGET T0955 MODEL 4 PARENT 3nuhB 3nuhB2 2nwvA 2id1A 2nvwA3 ATOM 1 N SER 1 -1.308 -11.622 -0.239 1.00 47.49 N ATOM 2 CA SER 1 -2.505 -11.560 0.635 1.00 47.49 C ATOM 3 CB SER 1 -2.927 -12.979 1.065 1.00 47.49 C ATOM 4 OG SER 1 -4.090 -12.917 1.878 1.00 47.49 O ATOM 5 C SER 1 -2.232 -10.770 1.870 1.00 47.49 C ATOM 6 O SER 1 -2.068 -9.551 1.831 1.00 47.49 O ATOM 7 N GLN 2 -2.180 -11.464 3.019 1.00 86.41 N ATOM 8 CA GLN 2 -1.924 -10.792 4.253 1.00 86.41 C ATOM 9 CB GLN 2 -1.887 -11.745 5.453 1.00 86.41 C ATOM 10 CG GLN 2 -1.412 -11.042 6.722 1.00 86.41 C ATOM 11 CD GLN 2 -0.961 -12.111 7.702 1.00 86.41 C ATOM 12 OE1 GLN 2 0.229 -12.240 7.987 1.00 86.41 O ATOM 13 NE2 GLN 2 -1.930 -12.907 8.226 1.00 86.41 N ATOM 14 C GLN 2 -0.559 -10.212 4.188 1.00 86.41 C ATOM 15 O GLN 2 -0.331 -9.091 4.640 1.00 86.41 O ATOM 16 N GLU 3 0.384 -10.991 3.632 1.00 76.84 N ATOM 17 CA GLU 3 1.757 -10.595 3.579 1.00 76.84 C ATOM 18 CB GLU 3 2.670 -11.679 2.979 1.00 76.84 C ATOM 19 CG GLU 3 2.334 -12.034 1.528 1.00 76.84 C ATOM 20 CD GLU 3 3.360 -13.049 1.038 1.00 76.84 C ATOM 21 OE1 GLU 3 4.582 -12.748 1.106 1.00 76.84 O ATOM 22 OE2 GLU 3 2.931 -14.144 0.587 1.00 76.84 O ATOM 23 C GLU 3 1.893 -9.383 2.725 1.00 76.84 C ATOM 24 O GLU 3 2.640 -8.468 3.070 1.00 76.84 O ATOM 25 N THR 4 1.172 -9.355 1.585 1.00 99.59 N ATOM 26 CA THR 4 1.285 -8.265 0.660 1.00 99.59 C ATOM 27 CB THR 4 0.544 -8.479 -0.636 1.00 99.59 C ATOM 28 OG1 THR 4 0.928 -7.485 -1.575 1.00 99.59 O ATOM 29 CG2 THR 4 -0.971 -8.391 -0.393 1.00 99.59 C ATOM 30 C THR 4 0.792 -7.012 1.298 1.00 99.59 C ATOM 31 O THR 4 1.395 -5.953 1.131 1.00 99.59 O ATOM 32 N ARG 5 -0.324 -7.105 2.051 1.00 79.12 N ATOM 33 CA ARG 5 -0.894 -5.940 2.662 1.00 79.12 C ATOM 34 CB ARG 5 -2.232 -6.183 3.377 1.00 79.12 C ATOM 35 CG ARG 5 -2.990 -4.868 3.588 1.00 79.12 C ATOM 36 CD ARG 5 -4.171 -4.943 4.557 1.00 79.12 C ATOM 37 NE ARG 5 -4.935 -3.671 4.406 1.00 79.12 N ATOM 38 CZ ARG 5 -4.456 -2.506 4.934 1.00 79.12 C ATOM 39 NH1 ARG 5 -3.259 -2.485 5.589 1.00 79.12 N ATOM 40 NH2 ARG 5 -5.174 -1.354 4.801 1.00 79.12 N ATOM 41 C ARG 5 0.054 -5.377 3.669 1.00 79.12 C ATOM 42 O ARG 5 0.195 -4.159 3.762 1.00 79.12 O ATOM 43 N LYS 6 0.719 -6.249 4.459 1.00146.79 N ATOM 44 CA LYS 6 1.608 -5.765 5.481 1.00146.79 C ATOM 45 CB LYS 6 2.173 -6.861 6.404 1.00146.79 C ATOM 46 CG LYS 6 3.056 -6.275 7.508 1.00146.79 C ATOM 47 CD LYS 6 2.316 -5.276 8.405 1.00146.79 C ATOM 48 CE LYS 6 0.957 -5.765 8.913 1.00146.79 C ATOM 49 NZ LYS 6 0.278 -4.689 9.678 1.00146.79 N ATOM 50 C LYS 6 2.758 -5.042 4.860 1.00146.79 C ATOM 51 O LYS 6 3.202 -4.018 5.378 1.00146.79 O ATOM 52 N LYS 7 3.278 -5.565 3.735 1.00126.97 N ATOM 53 CA LYS 7 4.415 -4.957 3.099 1.00126.97 C ATOM 54 CB LYS 7 4.872 -5.767 1.875 1.00126.97 C ATOM 55 CG LYS 7 6.243 -5.368 1.331 1.00126.97 C ATOM 56 CD LYS 7 6.798 -6.365 0.310 1.00126.97 C ATOM 57 CE LYS 7 7.034 -7.766 0.881 1.00126.97 C ATOM 58 NZ LYS 7 5.746 -8.485 1.016 1.00126.97 N ATOM 59 C LYS 7 4.058 -3.586 2.625 1.00126.97 C ATOM 60 O LYS 7 4.856 -2.654 2.750 1.00126.97 O ATOM 61 N CYS 8 2.849 -3.436 2.049 1.00119.16 N ATOM 62 CA CYS 8 2.457 -2.164 1.507 1.00119.16 C ATOM 63 CB CYS 8 1.124 -2.211 0.743 1.00119.16 C ATOM 64 SG CYS 8 0.877 -0.701 -0.236 1.00119.16 S ATOM 65 C CYS 8 2.342 -1.156 2.611 1.00119.16 C ATOM 66 O CYS 8 2.725 0.003 2.436 1.00119.16 O ATOM 67 N THR 9 1.805 -1.570 3.780 1.00115.01 N ATOM 68 CA THR 9 1.632 -0.633 4.857 1.00115.01 C ATOM 69 CB THR 9 0.884 -1.167 6.046 1.00115.01 C ATOM 70 OG1 THR 9 0.539 -0.093 6.908 1.00115.01 O ATOM 71 CG2 THR 9 1.764 -2.175 6.802 1.00115.01 C ATOM 72 C THR 9 2.965 -0.150 5.335 1.00115.01 C ATOM 73 O THR 9 3.123 1.031 5.651 1.00115.01 O ATOM 74 N GLU 10 3.955 -1.060 5.419 1.00 72.69 N ATOM 75 CA GLU 10 5.249 -0.683 5.919 1.00 72.69 C ATOM 76 CB GLU 10 6.207 -1.878 6.045 1.00 72.69 C ATOM 77 CG GLU 10 7.539 -1.517 6.704 1.00 72.69 C ATOM 78 CD GLU 10 8.324 -2.806 6.886 1.00 72.69 C ATOM 79 OE1 GLU 10 8.106 -3.746 6.075 1.00 72.69 O ATOM 80 OE2 GLU 10 9.144 -2.871 7.840 1.00 72.69 O ATOM 81 C GLU 10 5.883 0.317 5.000 1.00 72.69 C ATOM 82 O GLU 10 6.513 1.272 5.454 1.00 72.69 O ATOM 83 N MET 11 5.737 0.113 3.678 1.00110.31 N ATOM 84 CA MET 11 6.338 0.996 2.716 1.00110.31 C ATOM 85 CB MET 11 6.054 0.531 1.278 1.00110.31 C ATOM 86 CG MET 11 6.652 1.404 0.173 1.00110.31 C ATOM 87 SD MET 11 6.214 0.840 -1.501 1.00110.31 S ATOM 88 CE MET 11 7.209 2.081 -2.374 1.00110.31 C ATOM 89 C MET 11 5.751 2.367 2.850 1.00110.31 C ATOM 90 O MET 11 6.468 3.364 2.762 1.00110.31 O ATOM 91 N LYS 12 4.419 2.451 3.051 1.00 88.72 N ATOM 92 CA LYS 12 3.786 3.740 3.123 1.00 88.72 C ATOM 93 CB LYS 12 2.252 3.684 3.199 1.00 88.72 C ATOM 94 CG LYS 12 1.693 3.299 4.570 1.00 88.72 C ATOM 95 CD LYS 12 0.199 3.606 4.708 1.00 88.72 C ATOM 96 CE LYS 12 -0.387 3.287 6.088 1.00 88.72 C ATOM 97 NZ LYS 12 -1.824 3.643 6.119 1.00 88.72 N ATOM 98 C LYS 12 4.272 4.490 4.325 1.00 88.72 C ATOM 99 O LYS 12 4.481 5.704 4.263 1.00 88.72 O ATOM 100 N LYS 13 4.444 3.779 5.460 1.00 42.50 N ATOM 101 CA LYS 13 4.875 4.413 6.680 1.00 42.50 C ATOM 102 CB LYS 13 5.020 3.423 7.851 1.00 42.50 C ATOM 103 CG LYS 13 3.727 2.736 8.289 1.00 42.50 C ATOM 104 CD LYS 13 3.982 1.545 9.215 1.00 42.50 C ATOM 105 CE LYS 13 2.709 0.890 9.758 1.00 42.50 C ATOM 106 NZ LYS 13 3.056 -0.297 10.572 1.00 42.50 N ATOM 107 C LYS 13 6.240 4.991 6.480 1.00 42.50 C ATOM 108 O LYS 13 6.531 6.103 6.927 1.00 42.50 O ATOM 109 N LYS 14 7.126 4.234 5.807 1.00 45.85 N ATOM 110 CA LYS 14 8.470 4.708 5.637 1.00 45.85 C ATOM 111 CB LYS 14 9.364 3.736 4.848 1.00 45.85 C ATOM 112 CG LYS 14 9.650 2.388 5.512 1.00 45.85 C ATOM 113 CD LYS 14 10.343 1.410 4.556 1.00 45.85 C ATOM 114 CE LYS 14 10.667 0.044 5.164 1.00 45.85 C ATOM 115 NZ LYS 14 11.298 -0.816 4.139 1.00 45.85 N ATOM 116 C LYS 14 8.457 5.962 4.814 1.00 45.85 C ATOM 117 O LYS 14 9.193 6.911 5.098 1.00 45.85 O ATOM 118 N PHE 15 7.632 5.980 3.745 1.00203.32 N ATOM 119 CA PHE 15 7.696 7.085 2.827 1.00203.32 C ATOM 120 CB PHE 15 6.772 6.876 1.616 1.00203.32 C ATOM 121 CG PHE 15 6.898 8.062 0.723 1.00203.32 C ATOM 122 CD1 PHE 15 7.908 8.144 -0.210 1.00203.32 C ATOM 123 CD2 PHE 15 6.000 9.097 0.826 1.00203.32 C ATOM 124 CE1 PHE 15 8.014 9.241 -1.033 1.00203.32 C ATOM 125 CE2 PHE 15 6.100 10.197 0.007 1.00203.32 C ATOM 126 CZ PHE 15 7.108 10.269 -0.924 1.00203.32 C ATOM 127 C PHE 15 7.337 8.408 3.433 1.00203.32 C ATOM 128 O PHE 15 8.176 9.295 3.408 1.00203.32 O ATOM 129 N LYS 16 6.140 8.570 4.048 1.00341.14 N ATOM 130 CA LYS 16 5.684 9.850 4.568 1.00341.14 C ATOM 131 CB LYS 16 6.048 11.138 3.778 1.00341.14 C ATOM 132 CG LYS 16 7.406 11.812 4.018 1.00341.14 C ATOM 133 CD LYS 16 7.725 12.156 5.471 1.00341.14 C ATOM 134 CE LYS 16 9.094 12.821 5.617 1.00341.14 C ATOM 135 NZ LYS 16 10.140 11.964 5.014 1.00341.14 N ATOM 136 C LYS 16 4.187 9.858 4.471 1.00341.14 C ATOM 137 O LYS 16 3.526 8.853 4.723 1.00341.14 O ATOM 138 N ASN 17 3.622 11.039 4.101 1.00224.96 N ATOM 139 CA ASN 17 2.201 11.189 3.921 1.00224.96 C ATOM 140 CB ASN 17 1.774 12.605 3.510 1.00224.96 C ATOM 141 CG ASN 17 0.276 12.721 3.741 1.00224.96 C ATOM 142 OD1 ASN 17 -0.432 11.717 3.819 1.00224.96 O ATOM 143 ND2 ASN 17 -0.221 13.980 3.870 1.00224.96 N ATOM 144 C ASN 17 1.835 10.250 2.827 1.00224.96 C ATOM 145 O ASN 17 2.250 10.424 1.681 1.00224.96 O ATOM 146 N CYS 18 1.057 9.207 3.169 1.00123.98 N ATOM 147 CA CYS 18 0.720 8.246 2.169 1.00123.98 C ATOM 148 CB CYS 18 1.891 7.291 1.863 1.00123.98 C ATOM 149 SG CYS 18 1.512 6.045 0.593 1.00123.98 S ATOM 150 C CYS 18 -0.410 7.419 2.694 1.00123.98 C ATOM 151 O CYS 18 -0.692 7.410 3.892 1.00123.98 O ATOM 152 N GLU 19 -1.102 6.712 1.780 1.00204.72 N ATOM 153 CA GLU 19 -2.183 5.845 2.140 1.00204.72 C ATOM 154 CB GLU 19 -3.566 6.284 1.616 1.00204.72 C ATOM 155 CG GLU 19 -4.134 7.559 2.243 1.00204.72 C ATOM 156 CD GLU 19 -5.505 7.831 1.628 1.00204.72 C ATOM 157 OE1 GLU 19 -6.190 6.843 1.250 1.00204.72 O ATOM 158 OE2 GLU 19 -5.885 9.029 1.534 1.00204.72 O ATOM 159 C GLU 19 -1.919 4.542 1.462 1.00204.72 C ATOM 160 O GLU 19 -1.224 4.491 0.449 1.00204.72 O ATOM 161 N VAL 20 -2.459 3.443 2.019 1.00153.26 N ATOM 162 CA VAL 20 -2.259 2.169 1.395 1.00153.26 C ATOM 163 CB VAL 20 -1.614 1.171 2.300 1.00153.26 C ATOM 164 CG1 VAL 20 -2.458 1.084 3.584 1.00153.26 C ATOM 165 CG2 VAL 20 -1.550 -0.172 1.556 1.00153.26 C ATOM 166 C VAL 20 -3.594 1.594 1.069 1.00153.26 C ATOM 167 O VAL 20 -4.535 1.695 1.854 1.00153.26 O ATOM 168 N ARG 21 -3.707 0.988 -0.128 1.00294.65 N ATOM 169 CA ARG 21 -4.920 0.321 -0.488 1.00294.65 C ATOM 170 CB ARG 21 -5.804 1.118 -1.464 1.00294.65 C ATOM 171 CG ARG 21 -6.352 2.417 -0.869 1.00294.65 C ATOM 172 CD ARG 21 -7.603 2.235 -0.005 1.00294.65 C ATOM 173 NE ARG 21 -8.712 1.792 -0.897 1.00294.65 N ATOM 174 CZ ARG 21 -9.973 2.285 -0.712 1.00294.65 C ATOM 175 NH1 ARG 21 -10.204 3.222 0.253 1.00294.65 N ATOM 176 NH2 ARG 21 -11.005 1.841 -1.487 1.00294.65 N ATOM 177 C ARG 21 -4.516 -0.941 -1.172 1.00294.65 C ATOM 178 O ARG 21 -3.530 -0.967 -1.909 1.00294.65 O ATOM 179 N CYS 22 -5.263 -2.034 -0.925 1.00 84.43 N ATOM 180 CA CYS 22 -4.954 -3.278 -1.569 1.00 84.43 C ATOM 181 CB CYS 22 -4.761 -4.445 -0.587 1.00 84.43 C ATOM 182 SG CYS 22 -3.315 -4.211 0.489 1.00 84.43 S ATOM 183 C CYS 22 -6.129 -3.598 -2.427 1.00 84.43 C ATOM 184 O CYS 22 -7.273 -3.371 -2.038 1.00 84.43 O ATOM 185 N ASP 23 -5.878 -4.116 -3.641 1.00202.78 N ATOM 186 CA ASP 23 -6.981 -4.417 -4.500 1.00202.78 C ATOM 187 CB ASP 23 -6.758 -3.982 -5.955 1.00202.78 C ATOM 188 CG ASP 23 -6.768 -2.457 -5.985 1.00202.78 C ATOM 189 OD1 ASP 23 -7.333 -1.842 -5.041 1.00202.78 O ATOM 190 OD2 ASP 23 -6.209 -1.887 -6.961 1.00202.78 O ATOM 191 C ASP 23 -7.193 -5.894 -4.476 1.00202.78 C ATOM 192 O ASP 23 -6.242 -6.673 -4.423 1.00202.78 O ATOM 193 N GLU 24 -8.471 -6.318 -4.489 1.00256.89 N ATOM 194 CA GLU 24 -8.758 -7.718 -4.473 1.00256.89 C ATOM 195 CB GLU 24 -10.237 -8.041 -4.198 1.00256.89 C ATOM 196 CG GLU 24 -10.533 -9.539 -4.087 1.00256.89 C ATOM 197 CD GLU 24 -12.023 -9.695 -3.818 1.00256.89 C ATOM 198 OE1 GLU 24 -12.823 -9.081 -4.573 1.00256.89 O ATOM 199 OE2 GLU 24 -12.382 -10.427 -2.857 1.00256.89 O ATOM 200 C GLU 24 -8.430 -8.249 -5.820 1.00256.89 C ATOM 201 O GLU 24 -8.664 -7.602 -6.839 1.00256.89 O ATOM 202 N SER 25 -7.849 -9.454 -5.840 1.00256.30 N ATOM 203 CA SER 25 -7.439 -10.107 -7.041 1.00256.30 C ATOM 204 CB SER 25 -6.718 -9.160 -8.021 1.00256.30 C ATOM 205 OG SER 25 -6.332 -9.852 -9.198 1.00256.30 O ATOM 206 C SER 25 -6.458 -11.102 -6.526 1.00256.30 C ATOM 207 O SER 25 -6.485 -11.433 -5.342 1.00256.30 O ATOM 208 N ASN 26 -5.573 -11.637 -7.382 1.00 60.65 N ATOM 209 CA ASN 26 -4.606 -12.535 -6.829 1.00 60.65 C ATOM 210 CB ASN 26 -3.658 -13.130 -7.886 1.00 60.65 C ATOM 211 CG ASN 26 -4.427 -14.212 -8.642 1.00 60.65 C ATOM 212 OD1 ASN 26 -4.483 -15.366 -8.217 1.00 60.65 O ATOM 213 ND2 ASN 26 -5.047 -13.837 -9.792 1.00 60.65 N ATOM 214 C ASN 26 -3.803 -11.747 -5.846 1.00 60.65 C ATOM 215 O ASN 26 -3.626 -12.175 -4.707 1.00 60.65 O ATOM 216 N HIS 27 -3.323 -10.555 -6.252 1.00 86.99 N ATOM 217 CA HIS 27 -2.588 -9.721 -5.343 1.00 86.99 C ATOM 218 ND1 HIS 27 -0.851 -12.648 -5.500 1.00 86.99 N ATOM 219 CG HIS 27 -0.921 -11.548 -4.674 1.00 86.99 C ATOM 220 CB HIS 27 -1.112 -10.142 -5.170 1.00 86.99 C ATOM 221 NE2 HIS 27 -0.643 -13.405 -3.419 1.00 86.99 N ATOM 222 CD2 HIS 27 -0.793 -12.027 -3.406 1.00 86.99 C ATOM 223 CE1 HIS 27 -0.684 -13.731 -4.698 1.00 86.99 C ATOM 224 C HIS 27 -2.551 -8.364 -5.958 1.00 86.99 C ATOM 225 O HIS 27 -2.464 -8.228 -7.177 1.00 86.99 O ATOM 226 N CYS 28 -2.646 -7.313 -5.126 1.00 45.04 N ATOM 227 CA CYS 28 -2.560 -5.992 -5.668 1.00 45.04 C ATOM 228 CB CYS 28 -3.918 -5.388 -6.061 1.00 45.04 C ATOM 229 SG CYS 28 -4.734 -6.305 -7.402 1.00 45.04 S ATOM 230 C CYS 28 -2.005 -5.121 -4.597 1.00 45.04 C ATOM 231 O CYS 28 -2.160 -5.398 -3.407 1.00 45.04 O ATOM 232 N VAL 29 -1.305 -4.052 -5.006 1.00 72.18 N ATOM 233 CA VAL 29 -0.809 -3.108 -4.054 1.00 72.18 C ATOM 234 CB VAL 29 0.687 -3.140 -3.924 1.00 72.18 C ATOM 235 CG1 VAL 29 1.126 -1.987 -3.008 1.00 72.18 C ATOM 236 CG2 VAL 29 1.113 -4.538 -3.437 1.00 72.18 C ATOM 237 C VAL 29 -1.163 -1.769 -4.603 1.00 72.18 C ATOM 238 O VAL 29 -1.049 -1.541 -5.806 1.00 72.18 O ATOM 239 N GLU 30 -1.616 -0.841 -3.741 1.00249.90 N ATOM 240 CA GLU 30 -1.927 0.464 -4.246 1.00249.90 C ATOM 241 CB GLU 30 -3.436 0.722 -4.401 1.00249.90 C ATOM 242 CG GLU 30 -3.770 2.002 -5.169 1.00249.90 C ATOM 243 CD GLU 30 -5.277 2.033 -5.389 1.00249.90 C ATOM 244 OE1 GLU 30 -5.813 1.041 -5.952 1.00249.90 O ATOM 245 OE2 GLU 30 -5.912 3.046 -4.992 1.00249.90 O ATOM 246 C GLU 30 -1.386 1.450 -3.272 1.00249.90 C ATOM 247 O GLU 30 -1.366 1.209 -2.067 1.00249.90 O ATOM 248 N VAL 31 -0.895 2.592 -3.779 1.00113.63 N ATOM 249 CA VAL 31 -0.390 3.580 -2.880 1.00113.63 C ATOM 250 CB VAL 31 1.075 3.845 -3.061 1.00113.63 C ATOM 251 CG1 VAL 31 1.853 2.568 -2.710 1.00113.63 C ATOM 252 CG2 VAL 31 1.307 4.329 -4.503 1.00113.63 C ATOM 253 C VAL 31 -1.097 4.849 -3.203 1.00113.63 C ATOM 254 O VAL 31 -1.363 5.140 -4.367 1.00113.63 O ATOM 255 N ARG 32 -1.448 5.632 -2.168 1.00121.86 N ATOM 256 CA ARG 32 -2.050 6.902 -2.426 1.00121.86 C ATOM 257 CB ARG 32 -3.467 7.074 -1.858 1.00121.86 C ATOM 258 CG ARG 32 -4.050 8.454 -2.171 1.00121.86 C ATOM 259 CD ARG 32 -5.447 8.686 -1.594 1.00121.86 C ATOM 260 NE ARG 32 -6.304 7.565 -2.065 1.00121.86 N ATOM 261 CZ ARG 32 -7.611 7.781 -2.389 1.00121.86 C ATOM 262 NH1 ARG 32 -8.135 9.040 -2.340 1.00121.86 N ATOM 263 NH2 ARG 32 -8.392 6.730 -2.775 1.00121.86 N ATOM 264 C ARG 32 -1.195 7.900 -1.719 1.00121.86 C ATOM 265 O ARG 32 -0.689 7.644 -0.630 1.00121.86 O ATOM 266 N CYS 33 -0.982 9.068 -2.342 1.00 48.98 N ATOM 267 CA CYS 33 -0.200 10.082 -1.703 1.00 48.98 C ATOM 268 CB CYS 33 1.083 10.465 -2.463 1.00 48.98 C ATOM 269 SG CYS 33 2.359 9.169 -2.416 1.00 48.98 S ATOM 270 C CYS 33 -1.066 11.284 -1.677 1.00 48.98 C ATOM 271 O CYS 33 -2.123 11.301 -2.305 1.00 48.98 O ATOM 272 N SER 34 -0.664 12.313 -0.915 1.00 89.94 N ATOM 273 CA SER 34 -1.484 13.476 -0.929 1.00 89.94 C ATOM 274 CB SER 34 -0.977 14.607 -0.025 1.00 89.94 C ATOM 275 OG SER 34 -1.154 14.225 1.330 1.00 89.94 O ATOM 276 C SER 34 -1.494 13.967 -2.342 1.00 89.94 C ATOM 277 O SER 34 -2.541 14.358 -2.856 1.00 89.94 O ATOM 278 N ASP 35 -0.324 13.943 -3.012 1.00131.78 N ATOM 279 CA ASP 35 -0.264 14.417 -4.363 1.00131.78 C ATOM 280 CB ASP 35 1.168 14.428 -4.924 1.00131.78 C ATOM 281 CG ASP 35 1.121 14.975 -6.345 1.00131.78 C ATOM 282 OD1 ASP 35 1.097 16.225 -6.500 1.00131.78 O ATOM 283 OD2 ASP 35 1.120 14.147 -7.295 1.00131.78 O ATOM 284 C ASP 35 -1.101 13.539 -5.255 1.00131.78 C ATOM 285 O ASP 35 -1.976 14.037 -5.962 1.00131.78 O ATOM 286 N THR 36 -0.869 12.205 -5.249 1.00291.11 N ATOM 287 CA THR 36 -1.666 11.360 -6.099 1.00291.11 C ATOM 288 CB THR 36 -1.385 11.543 -7.560 1.00291.11 C ATOM 289 OG1 THR 36 -2.353 10.851 -8.333 1.00291.11 O ATOM 290 CG2 THR 36 0.024 11.015 -7.870 1.00291.11 C ATOM 291 C THR 36 -1.427 9.920 -5.748 1.00291.11 C ATOM 292 O THR 36 -0.619 9.608 -4.877 1.00291.11 O ATOM 293 N LYS 37 -2.142 8.998 -6.438 1.00294.72 N ATOM 294 CA LYS 37 -2.064 7.580 -6.179 1.00294.72 C ATOM 295 CB LYS 37 -3.415 6.857 -6.342 1.00294.72 C ATOM 296 CG LYS 37 -4.524 7.366 -5.423 1.00294.72 C ATOM 297 CD LYS 37 -5.912 6.835 -5.802 1.00294.72 C ATOM 298 CE LYS 37 -6.333 7.147 -7.241 1.00294.72 C ATOM 299 NZ LYS 37 -5.765 6.141 -8.169 1.00294.72 N ATOM 300 C LYS 37 -1.155 6.928 -7.176 1.00294.72 C ATOM 301 O LYS 37 -0.883 7.471 -8.245 1.00294.72 O ATOM 302 N TYR 38 -0.628 5.741 -6.806 1.00286.03 N ATOM 303 CA TYR 38 0.143 4.908 -7.682 1.00286.03 C ATOM 304 CB TYR 38 1.657 4.925 -7.402 1.00286.03 C ATOM 305 CG TYR 38 2.187 6.221 -7.916 1.00286.03 C ATOM 306 CD1 TYR 38 2.608 6.327 -9.223 1.00286.03 C ATOM 307 CD2 TYR 38 2.254 7.332 -7.107 1.00286.03 C ATOM 308 CE1 TYR 38 3.098 7.515 -9.713 1.00286.03 C ATOM 309 CE2 TYR 38 2.743 8.522 -7.591 1.00286.03 C ATOM 310 CZ TYR 38 3.165 8.615 -8.896 1.00286.03 C ATOM 311 OH TYR 38 3.668 9.835 -9.392 1.00286.03 O ATOM 312 C TYR 38 -0.363 3.511 -7.516 1.00286.03 C ATOM 313 O TYR 38 -0.821 3.133 -6.438 1.00286.03 O ATOM 314 N THR 39 -0.311 2.709 -8.597 1.00274.81 N ATOM 315 CA THR 39 -0.788 1.361 -8.506 1.00274.81 C ATOM 316 CB THR 39 -1.783 0.998 -9.570 1.00274.81 C ATOM 317 OG1 THR 39 -2.289 -0.309 -9.344 1.00274.81 O ATOM 318 CG2 THR 39 -1.090 1.073 -10.941 1.00274.81 C ATOM 319 C THR 39 0.379 0.456 -8.686 1.00274.81 C ATOM 320 O THR 39 1.235 0.681 -9.540 1.00274.81 O ATOM 321 N LEU 40 0.454 -0.589 -7.845 1.00224.67 N ATOM 322 CA LEU 40 1.519 -1.530 -7.994 1.00224.67 C ATOM 323 CB LEU 40 2.203 -1.909 -6.669 1.00224.67 C ATOM 324 CG LEU 40 2.887 -0.724 -5.962 1.00224.67 C ATOM 325 CD1 LEU 40 1.855 0.338 -5.546 1.00224.67 C ATOM 326 CD2 LEU 40 3.760 -1.203 -4.788 1.00224.67 C ATOM 327 C LEU 40 0.886 -2.768 -8.529 1.00224.67 C ATOM 328 O LEU 40 -0.108 -3.250 -7.988 1.00224.67 O ATOM 329 N CYS 41 1.442 -3.304 -9.630 1.00 76.55 N ATOM 330 CA CYS 41 0.875 -4.491 -10.187 1.00 76.55 C ATOM 331 CB CYS 41 1.355 -4.797 -11.615 1.00 76.55 C ATOM 332 SG CYS 41 3.144 -5.099 -11.698 1.00 76.55 S ATOM 333 C CYS 41 1.303 -5.645 -9.291 1.00 76.55 C ATOM 334 O CYS 41 0.454 -6.545 -9.051 1.00 76.55 O ATOM 335 OXT CYS 41 2.477 -5.639 -8.830 1.00 76.55 O TER END