####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS116_2 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS116_2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 2.07 2.07 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 40 2 - 41 1.99 2.08 LCS_AVERAGE: 96.55 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 2 - 17 0.92 4.67 LCS_AVERAGE: 32.78 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 23 41 3 3 3 4 9 14 39 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Q 2 Q 2 16 40 41 11 14 18 29 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 3 E 3 16 40 41 11 14 18 29 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 4 T 4 16 40 41 11 14 18 29 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 5 R 5 16 40 41 11 14 17 29 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 6 K 6 16 40 41 11 14 18 29 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 7 K 7 16 40 41 11 14 18 29 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 8 C 8 16 40 41 11 14 15 29 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 9 T 9 16 40 41 11 14 15 29 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 10 E 10 16 40 41 11 14 18 29 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT M 11 M 11 16 40 41 11 14 15 29 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 12 K 12 16 40 41 11 14 15 29 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 13 K 13 16 40 41 11 14 18 29 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 14 K 14 16 40 41 10 14 15 27 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT F 15 F 15 16 40 41 3 14 15 22 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 16 K 16 16 40 41 3 5 15 20 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 17 N 17 16 40 41 4 10 18 29 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 18 C 18 7 40 41 6 15 18 29 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 19 E 19 7 40 41 6 15 18 29 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 20 V 20 7 40 41 6 15 18 29 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 21 R 21 7 40 41 6 13 18 29 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 22 C 22 7 40 41 6 12 18 21 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 23 D 23 7 40 41 6 12 14 20 33 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 24 E 24 7 40 41 3 12 14 16 28 37 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 25 S 25 9 40 41 6 15 18 27 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 26 N 26 9 40 41 3 5 10 23 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT H 27 H 27 15 40 41 6 15 18 29 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 28 C 28 15 40 41 6 15 18 29 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 29 V 29 15 40 41 6 15 18 29 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 30 E 30 15 40 41 6 15 18 29 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 31 V 31 15 40 41 6 15 18 29 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 32 R 32 15 40 41 5 14 18 29 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 33 C 33 15 40 41 6 15 18 29 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 34 S 34 15 40 41 4 15 18 29 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 35 D 35 15 40 41 3 7 18 24 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 36 T 36 15 40 41 3 6 16 29 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 37 K 37 15 40 41 6 15 18 29 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT Y 38 Y 38 15 40 41 6 15 18 29 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 39 T 39 15 40 41 4 15 18 29 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT L 40 L 40 15 40 41 6 15 18 29 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 41 C 41 15 40 41 3 7 18 24 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 LCS_AVERAGE LCS_A: 76.44 ( 32.78 96.55 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 11 15 18 29 34 39 40 41 41 41 41 41 41 41 41 41 41 41 41 41 GDT PERCENT_AT 26.83 36.59 43.90 70.73 82.93 95.12 97.56 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.33 0.74 0.83 1.46 1.65 1.89 1.99 2.07 2.07 2.07 2.07 2.07 2.07 2.07 2.07 2.07 2.07 2.07 2.07 2.07 GDT RMS_ALL_AT 5.61 2.59 2.64 2.22 2.15 2.10 2.08 2.07 2.07 2.07 2.07 2.07 2.07 2.07 2.07 2.07 2.07 2.07 2.07 2.07 # Checking swapping # possible swapping detected: E 3 E 3 # possible swapping detected: E 10 E 10 # possible swapping detected: F 15 F 15 # possible swapping detected: E 24 E 24 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 4.226 0 0.273 0.406 5.616 4.091 5.455 4.377 LGA Q 2 Q 2 1.661 0 0.276 0.874 2.357 50.909 59.596 0.792 LGA E 3 E 3 2.197 0 0.066 1.092 7.421 44.545 23.030 5.339 LGA T 4 T 4 1.947 0 0.036 1.137 4.187 50.909 36.883 4.187 LGA R 5 R 5 1.283 0 0.052 1.107 8.637 65.455 32.397 8.637 LGA K 6 K 6 1.502 0 0.041 0.784 8.226 61.818 32.929 8.226 LGA K 7 K 7 1.983 0 0.054 1.013 4.145 47.727 32.727 2.641 LGA C 8 C 8 2.158 0 0.049 0.074 3.686 47.727 38.182 3.686 LGA T 9 T 9 1.595 0 0.038 1.084 3.657 61.818 47.792 2.038 LGA E 10 E 10 1.789 0 0.037 0.669 5.537 54.545 28.889 4.896 LGA M 11 M 11 2.173 0 0.064 1.292 3.233 44.545 39.091 2.001 LGA K 12 K 12 2.096 0 0.037 0.763 3.067 47.727 40.606 3.067 LGA K 13 K 13 1.785 0 0.037 1.456 5.778 58.182 32.121 5.778 LGA K 14 K 14 2.207 0 0.056 0.392 4.258 38.636 27.071 4.258 LGA F 15 F 15 2.854 0 0.460 0.669 5.787 19.091 34.876 1.531 LGA K 16 K 16 2.830 0 0.116 0.893 3.692 30.455 28.485 1.914 LGA N 17 N 17 1.223 0 0.506 1.125 3.215 46.364 49.318 1.860 LGA C 18 C 18 1.014 0 0.071 0.804 3.610 69.545 56.667 3.610 LGA E 19 E 19 1.675 0 0.305 1.039 6.127 58.182 33.333 5.136 LGA V 20 V 20 1.424 0 0.129 1.149 4.424 58.182 53.766 0.497 LGA R 21 R 21 1.308 0 0.108 1.391 7.084 61.818 35.702 7.084 LGA C 22 C 22 2.635 0 0.042 0.775 5.167 32.727 24.848 5.167 LGA D 23 D 23 3.263 0 0.142 0.943 4.883 13.182 11.818 3.879 LGA E 24 E 24 4.066 0 0.640 1.173 5.983 6.818 5.455 5.520 LGA S 25 S 25 1.858 0 0.511 0.855 4.650 55.000 41.515 4.650 LGA N 26 N 26 2.859 0 0.721 0.971 5.583 39.091 20.000 5.583 LGA H 27 H 27 1.110 0 0.416 1.189 6.088 55.000 35.091 6.088 LGA C 28 C 28 1.498 0 0.048 0.756 2.485 58.182 53.636 2.485 LGA V 29 V 29 1.511 0 0.180 0.197 2.164 58.182 53.247 1.931 LGA E 30 E 30 0.891 0 0.034 0.606 2.079 81.818 65.253 2.048 LGA V 31 V 31 1.522 0 0.057 0.094 1.728 54.545 52.987 1.728 LGA R 32 R 32 1.666 0 0.199 1.232 4.370 47.727 42.314 4.370 LGA C 33 C 33 1.103 0 0.520 1.117 2.904 55.909 57.273 2.186 LGA S 34 S 34 2.212 0 0.125 0.680 2.797 41.364 45.758 0.987 LGA D 35 D 35 2.383 0 0.114 1.217 2.771 35.455 42.273 1.392 LGA T 36 T 36 2.489 0 0.238 1.078 5.242 51.364 35.844 5.242 LGA K 37 K 37 1.052 0 0.174 0.913 1.859 70.000 66.061 0.822 LGA Y 38 Y 38 0.377 0 0.065 1.382 6.417 86.364 52.121 6.417 LGA T 39 T 39 0.884 0 0.210 1.037 3.378 81.818 62.597 2.659 LGA L 40 L 40 1.715 0 0.148 0.233 3.684 39.545 30.227 3.301 LGA C 41 C 41 2.496 0 0.127 0.829 5.226 34.545 35.325 5.226 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 2.074 2.133 2.954 49.290 39.087 24.523 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 41 2.07 76.829 86.333 1.886 LGA_LOCAL RMSD: 2.074 Number of atoms: 41 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.074 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 2.074 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.946798 * X + -0.212213 * Y + 0.241950 * Z + -2.387801 Y_new = -0.315342 * X + 0.761909 * Y + -0.565732 * Z + 62.383923 Z_new = -0.064288 * X + -0.611931 * Y + -0.788294 * Z + -43.278469 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.820086 0.064333 -2.481488 [DEG: -161.5790 3.6860 -142.1788 ] ZXZ: 0.404134 2.478827 -3.036919 [DEG: 23.1552 142.0264 -174.0026 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS116_2 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS116_2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 41 2.07 86.333 2.07 REMARK ---------------------------------------------------------- MOLECULE T0955TS116_2 PFRMAT TS TARGET T0955 MODEL 2 PARENT 3nuhB 3nuhB2 2nwvA 2id1A 2nvwA3 ATOM 1 N SER 1 -1.261 -10.379 -1.594 1.00 21.52 N ATOM 2 CA SER 1 -1.690 -11.287 -0.505 1.00 21.52 C ATOM 3 CB SER 1 -1.020 -12.663 -0.638 1.00 21.52 C ATOM 4 OG SER 1 -1.472 -13.314 -1.815 1.00 21.52 O ATOM 5 C SER 1 -1.343 -10.750 0.837 1.00 21.52 C ATOM 6 O SER 1 -1.300 -9.540 1.053 1.00 21.52 O ATOM 7 N GLN 2 -1.110 -11.669 1.791 1.00116.31 N ATOM 8 CA GLN 2 -0.784 -11.281 3.129 1.00116.31 C ATOM 9 CB GLN 2 -0.593 -12.503 4.042 1.00116.31 C ATOM 10 CG GLN 2 -0.630 -12.172 5.529 1.00116.31 C ATOM 11 CD GLN 2 -2.096 -12.277 5.922 1.00116.31 C ATOM 12 OE1 GLN 2 -2.927 -12.746 5.147 1.00116.31 O ATOM 13 NE2 GLN 2 -2.433 -11.829 7.159 1.00116.31 N ATOM 14 C GLN 2 0.529 -10.569 3.102 1.00116.31 C ATOM 15 O GLN 2 0.691 -9.512 3.708 1.00116.31 O ATOM 16 N GLU 3 1.495 -11.141 2.358 1.00 76.67 N ATOM 17 CA GLU 3 2.824 -10.614 2.283 1.00 76.67 C ATOM 18 CB GLU 3 3.775 -11.505 1.479 1.00 76.67 C ATOM 19 CG GLU 3 5.220 -11.007 1.475 1.00 76.67 C ATOM 20 CD GLU 3 5.988 -11.890 0.505 1.00 76.67 C ATOM 21 OE1 GLU 3 5.497 -13.016 0.217 1.00 76.67 O ATOM 22 OE2 GLU 3 7.070 -11.454 0.031 1.00 76.67 O ATOM 23 C GLU 3 2.798 -9.282 1.616 1.00 76.67 C ATOM 24 O GLU 3 3.494 -8.363 2.043 1.00 76.67 O ATOM 25 N THR 4 1.985 -9.160 0.547 1.00 42.76 N ATOM 26 CA THR 4 1.892 -7.953 -0.226 1.00 42.76 C ATOM 27 CB THR 4 0.988 -8.095 -1.412 1.00 42.76 C ATOM 28 OG1 THR 4 1.459 -9.146 -2.244 1.00 42.76 O ATOM 29 CG2 THR 4 0.964 -6.763 -2.187 1.00 42.76 C ATOM 30 C THR 4 1.350 -6.855 0.627 1.00 42.76 C ATOM 31 O THR 4 1.836 -5.726 0.569 1.00 42.76 O ATOM 32 N ARG 5 0.323 -7.164 1.441 1.00113.20 N ATOM 33 CA ARG 5 -0.315 -6.186 2.275 1.00113.20 C ATOM 34 CB ARG 5 -1.493 -6.752 3.086 1.00113.20 C ATOM 35 CG ARG 5 -2.186 -5.714 3.976 1.00113.20 C ATOM 36 CD ARG 5 -2.573 -6.252 5.358 1.00113.20 C ATOM 37 NE ARG 5 -3.428 -5.229 6.022 1.00113.20 N ATOM 38 CZ ARG 5 -4.275 -5.612 7.022 1.00113.20 C ATOM 39 NH1 ARG 5 -4.276 -6.907 7.453 1.00113.20 N ATOM 40 NH2 ARG 5 -5.142 -4.714 7.573 1.00113.20 N ATOM 41 C ARG 5 0.667 -5.676 3.274 1.00113.20 C ATOM 42 O ARG 5 0.697 -4.481 3.551 1.00113.20 O ATOM 43 N LYS 6 1.487 -6.574 3.851 1.00104.71 N ATOM 44 CA LYS 6 2.422 -6.189 4.875 1.00104.71 C ATOM 45 CB LYS 6 3.199 -7.415 5.392 1.00104.71 C ATOM 46 CG LYS 6 3.928 -7.228 6.720 1.00104.71 C ATOM 47 CD LYS 6 4.528 -8.538 7.231 1.00104.71 C ATOM 48 CE LYS 6 5.096 -8.447 8.641 1.00104.71 C ATOM 49 NZ LYS 6 4.042 -8.796 9.619 1.00104.71 N ATOM 50 C LYS 6 3.418 -5.239 4.296 1.00104.71 C ATOM 51 O LYS 6 3.783 -4.255 4.938 1.00104.71 O ATOM 52 N LYS 7 3.886 -5.518 3.064 1.00 91.66 N ATOM 53 CA LYS 7 4.897 -4.706 2.442 1.00 91.66 C ATOM 54 CB LYS 7 5.289 -5.230 1.054 1.00 91.66 C ATOM 55 CG LYS 7 5.805 -6.669 1.056 1.00 91.66 C ATOM 56 CD LYS 7 5.968 -7.231 -0.356 1.00 91.66 C ATOM 57 CE LYS 7 7.100 -6.559 -1.137 1.00 91.66 C ATOM 58 NZ LYS 7 6.925 -6.803 -2.585 1.00 91.66 N ATOM 59 C LYS 7 4.373 -3.327 2.227 1.00 91.66 C ATOM 60 O LYS 7 5.087 -2.350 2.451 1.00 91.66 O ATOM 61 N CYS 8 3.109 -3.225 1.773 1.00126.55 N ATOM 62 CA CYS 8 2.530 -1.946 1.475 1.00126.55 C ATOM 63 CB CYS 8 1.122 -2.069 0.872 1.00126.55 C ATOM 64 SG CYS 8 0.471 -0.477 0.293 1.00126.55 S ATOM 65 C CYS 8 2.428 -1.123 2.722 1.00126.55 C ATOM 66 O CYS 8 2.677 0.081 2.687 1.00126.55 O ATOM 67 N THR 9 2.038 -1.757 3.853 1.00119.30 N ATOM 68 CA THR 9 1.872 -1.039 5.088 1.00119.30 C ATOM 69 CB THR 9 1.331 -1.894 6.200 1.00119.30 C ATOM 70 OG1 THR 9 2.252 -2.920 6.528 1.00119.30 O ATOM 71 CG2 THR 9 -0.009 -2.505 5.751 1.00119.30 C ATOM 72 C THR 9 3.190 -0.494 5.546 1.00119.30 C ATOM 73 O THR 9 3.259 0.637 6.028 1.00119.30 O ATOM 74 N GLU 10 4.271 -1.291 5.412 1.00 46.42 N ATOM 75 CA GLU 10 5.567 -0.845 5.847 1.00 46.42 C ATOM 76 CB GLU 10 6.675 -1.903 5.663 1.00 46.42 C ATOM 77 CG GLU 10 6.538 -3.121 6.578 1.00 46.42 C ATOM 78 CD GLU 10 7.825 -3.930 6.490 1.00 46.42 C ATOM 79 OE1 GLU 10 8.366 -4.072 5.361 1.00 46.42 O ATOM 80 OE2 GLU 10 8.286 -4.413 7.558 1.00 46.42 O ATOM 81 C GLU 10 5.986 0.348 5.046 1.00 46.42 C ATOM 82 O GLU 10 6.539 1.299 5.602 1.00 46.42 O ATOM 83 N MET 11 5.743 0.329 3.715 1.00 46.75 N ATOM 84 CA MET 11 6.184 1.426 2.892 1.00 46.75 C ATOM 85 CB MET 11 5.954 1.223 1.384 1.00 46.75 C ATOM 86 CG MET 11 6.843 0.140 0.769 1.00 46.75 C ATOM 87 SD MET 11 6.589 -0.122 -1.013 1.00 46.75 S ATOM 88 CE MET 11 4.998 -0.975 -0.825 1.00 46.75 C ATOM 89 C MET 11 5.462 2.678 3.279 1.00 46.75 C ATOM 90 O MET 11 6.066 3.757 3.303 1.00 46.75 O ATOM 91 N LYS 12 4.148 2.581 3.569 1.00103.87 N ATOM 92 CA LYS 12 3.420 3.774 3.895 1.00103.87 C ATOM 93 CB LYS 12 1.888 3.637 3.944 1.00103.87 C ATOM 94 CG LYS 12 1.270 3.016 5.192 1.00103.87 C ATOM 95 CD LYS 12 -0.237 3.270 5.207 1.00103.87 C ATOM 96 CE LYS 12 -0.982 2.612 6.363 1.00103.87 C ATOM 97 NZ LYS 12 -2.439 2.769 6.157 1.00103.87 N ATOM 98 C LYS 12 3.923 4.363 5.182 1.00103.87 C ATOM 99 O LYS 12 3.971 5.585 5.328 1.00103.87 O ATOM 100 N LYS 13 4.287 3.510 6.165 1.00145.85 N ATOM 101 CA LYS 13 4.786 3.988 7.434 1.00145.85 C ATOM 102 CB LYS 13 5.226 2.842 8.354 1.00145.85 C ATOM 103 CG LYS 13 5.958 3.353 9.598 1.00145.85 C ATOM 104 CD LYS 13 6.524 2.262 10.510 1.00145.85 C ATOM 105 CE LYS 13 7.948 1.834 10.126 1.00145.85 C ATOM 106 NZ LYS 13 8.873 2.988 10.216 1.00145.85 N ATOM 107 C LYS 13 6.056 4.749 7.220 1.00145.85 C ATOM 108 O LYS 13 6.272 5.790 7.843 1.00145.85 O ATOM 109 N LYS 14 6.952 4.218 6.362 1.00 89.67 N ATOM 110 CA LYS 14 8.212 4.872 6.150 1.00 89.67 C ATOM 111 CB LYS 14 9.145 4.102 5.199 1.00 89.67 C ATOM 112 CG LYS 14 9.886 2.930 5.845 1.00 89.67 C ATOM 113 CD LYS 14 10.535 1.987 4.827 1.00 89.67 C ATOM 114 CE LYS 14 11.717 1.194 5.388 1.00 89.67 C ATOM 115 NZ LYS 14 11.516 0.933 6.829 1.00 89.67 N ATOM 116 C LYS 14 7.996 6.227 5.535 1.00 89.67 C ATOM 117 O LYS 14 8.644 7.200 5.926 1.00 89.67 O ATOM 118 N PHE 15 7.096 6.326 4.533 1.00135.27 N ATOM 119 CA PHE 15 6.872 7.591 3.880 1.00135.27 C ATOM 120 CB PHE 15 5.979 7.498 2.629 1.00135.27 C ATOM 121 CG PHE 15 6.799 6.856 1.562 1.00135.27 C ATOM 122 CD1 PHE 15 7.717 7.590 0.845 1.00135.27 C ATOM 123 CD2 PHE 15 6.653 5.518 1.284 1.00135.27 C ATOM 124 CE1 PHE 15 8.469 6.990 -0.138 1.00135.27 C ATOM 125 CE2 PHE 15 7.398 4.912 0.304 1.00135.27 C ATOM 126 CZ PHE 15 8.313 5.651 -0.405 1.00135.27 C ATOM 127 C PHE 15 6.265 8.599 4.818 1.00135.27 C ATOM 128 O PHE 15 6.677 9.763 4.851 1.00135.27 O ATOM 129 N LYS 16 5.262 8.158 5.606 1.00295.96 N ATOM 130 CA LYS 16 4.576 8.948 6.594 1.00295.96 C ATOM 131 CB LYS 16 5.556 9.712 7.501 1.00295.96 C ATOM 132 CG LYS 16 4.919 10.439 8.685 1.00295.96 C ATOM 133 CD LYS 16 5.939 10.780 9.777 1.00295.96 C ATOM 134 CE LYS 16 5.330 11.423 11.024 1.00295.96 C ATOM 135 NZ LYS 16 4.713 10.386 11.880 1.00295.96 N ATOM 136 C LYS 16 3.616 9.939 5.997 1.00295.96 C ATOM 137 O LYS 16 2.999 10.707 6.734 1.00295.96 O ATOM 138 N ASN 17 3.433 9.962 4.663 1.00198.53 N ATOM 139 CA ASN 17 2.390 10.806 4.136 1.00198.53 C ATOM 140 CB ASN 17 2.895 12.164 3.627 1.00198.53 C ATOM 141 CG ASN 17 3.102 13.047 4.851 1.00198.53 C ATOM 142 OD1 ASN 17 4.232 13.363 5.220 1.00198.53 O ATOM 143 ND2 ASN 17 1.980 13.440 5.514 1.00198.53 N ATOM 144 C ASN 17 1.789 10.052 3.004 1.00198.53 C ATOM 145 O ASN 17 2.057 10.341 1.838 1.00198.53 O ATOM 146 N CYS 18 0.938 9.065 3.334 1.00123.47 N ATOM 147 CA CYS 18 0.384 8.279 2.284 1.00123.47 C ATOM 148 CB CYS 18 1.443 7.369 1.639 1.00123.47 C ATOM 149 SG CYS 18 0.799 6.359 0.277 1.00123.47 S ATOM 150 C CYS 18 -0.665 7.396 2.880 1.00123.47 C ATOM 151 O CYS 18 -0.738 7.229 4.096 1.00123.47 O ATOM 152 N GLU 19 -1.526 6.833 2.011 1.00237.65 N ATOM 153 CA GLU 19 -2.547 5.916 2.413 1.00237.65 C ATOM 154 CB GLU 19 -3.968 6.479 2.230 1.00237.65 C ATOM 155 CG GLU 19 -4.367 7.547 3.258 1.00237.65 C ATOM 156 CD GLU 19 -5.264 6.899 4.311 1.00237.65 C ATOM 157 OE1 GLU 19 -4.892 5.815 4.840 1.00237.65 O ATOM 158 OE2 GLU 19 -6.352 7.477 4.579 1.00237.65 O ATOM 159 C GLU 19 -2.420 4.724 1.523 1.00237.65 C ATOM 160 O GLU 19 -2.063 4.854 0.353 1.00237.65 O ATOM 161 N VAL 20 -2.687 3.520 2.071 1.00152.71 N ATOM 162 CA VAL 20 -2.549 2.338 1.273 1.00152.71 C ATOM 163 CB VAL 20 -1.564 1.359 1.837 1.00152.71 C ATOM 164 CG1 VAL 20 -0.189 2.050 1.895 1.00152.71 C ATOM 165 CG2 VAL 20 -2.068 0.868 3.202 1.00152.71 C ATOM 166 C VAL 20 -3.890 1.680 1.198 1.00152.71 C ATOM 167 O VAL 20 -4.616 1.608 2.191 1.00152.71 O ATOM 168 N ARG 21 -4.263 1.200 -0.005 1.00263.17 N ATOM 169 CA ARG 21 -5.543 0.577 -0.185 1.00263.17 C ATOM 170 CB ARG 21 -6.466 1.361 -1.138 1.00263.17 C ATOM 171 CG ARG 21 -6.684 2.820 -0.716 1.00263.17 C ATOM 172 CD ARG 21 -7.758 3.559 -1.521 1.00263.17 C ATOM 173 NE ARG 21 -7.622 5.017 -1.230 1.00263.17 N ATOM 174 CZ ARG 21 -6.775 5.785 -1.976 1.00263.17 C ATOM 175 NH1 ARG 21 -6.069 5.210 -2.993 1.00263.17 N ATOM 176 NH2 ARG 21 -6.628 7.117 -1.710 1.00263.17 N ATOM 177 C ARG 21 -5.302 -0.762 -0.800 1.00263.17 C ATOM 178 O ARG 21 -4.364 -0.933 -1.574 1.00263.17 O ATOM 179 N CYS 22 -6.137 -1.763 -0.451 1.00138.07 N ATOM 180 CA CYS 22 -5.960 -3.064 -1.033 1.00138.07 C ATOM 181 CB CYS 22 -5.901 -4.212 -0.012 1.00138.07 C ATOM 182 SG CYS 22 -7.424 -4.386 0.964 1.00138.07 S ATOM 183 C CYS 22 -7.119 -3.329 -1.929 1.00138.07 C ATOM 184 O CYS 22 -8.224 -2.843 -1.701 1.00138.07 O ATOM 185 N ASP 23 -6.876 -4.100 -3.002 1.00261.00 N ATOM 186 CA ASP 23 -7.926 -4.393 -3.922 1.00261.00 C ATOM 187 CB ASP 23 -7.530 -4.031 -5.367 1.00261.00 C ATOM 188 CG ASP 23 -8.765 -3.908 -6.252 1.00261.00 C ATOM 189 OD1 ASP 23 -9.756 -3.262 -5.818 1.00261.00 O ATOM 190 OD2 ASP 23 -8.726 -4.464 -7.382 1.00261.00 O ATOM 191 C ASP 23 -8.176 -5.870 -3.839 1.00261.00 C ATOM 192 O ASP 23 -7.244 -6.661 -3.688 1.00261.00 O ATOM 193 N GLU 24 -9.453 -6.289 -3.916 1.00277.31 N ATOM 194 CA GLU 24 -9.697 -7.698 -3.863 1.00277.31 C ATOM 195 CB GLU 24 -11.010 -8.091 -3.161 1.00277.31 C ATOM 196 CG GLU 24 -11.052 -9.554 -2.709 1.00277.31 C ATOM 197 CD GLU 24 -11.216 -10.461 -3.920 1.00277.31 C ATOM 198 OE1 GLU 24 -11.874 -10.038 -4.909 1.00277.31 O ATOM 199 OE2 GLU 24 -10.676 -11.599 -3.869 1.00277.31 O ATOM 200 C GLU 24 -9.802 -8.158 -5.276 1.00277.31 C ATOM 201 O GLU 24 -10.655 -7.705 -6.038 1.00277.31 O ATOM 202 N SER 25 -8.894 -9.070 -5.655 1.00217.16 N ATOM 203 CA SER 25 -8.817 -9.593 -6.983 1.00217.16 C ATOM 204 CB SER 25 -8.963 -8.519 -8.074 1.00217.16 C ATOM 205 OG SER 25 -7.908 -7.577 -7.973 1.00217.16 O ATOM 206 C SER 25 -7.431 -10.139 -7.054 1.00217.16 C ATOM 207 O SER 25 -6.915 -10.671 -6.074 1.00217.16 O ATOM 208 N ASN 26 -6.791 -10.039 -8.234 1.00267.20 N ATOM 209 CA ASN 26 -5.421 -10.449 -8.290 1.00267.20 C ATOM 210 CB ASN 26 -4.763 -10.258 -9.668 1.00267.20 C ATOM 211 CG ASN 26 -4.882 -8.786 -10.040 1.00267.20 C ATOM 212 OD1 ASN 26 -5.907 -8.340 -10.554 1.00267.20 O ATOM 213 ND2 ASN 26 -3.808 -8.005 -9.753 1.00267.20 N ATOM 214 C ASN 26 -4.739 -9.559 -7.309 1.00267.20 C ATOM 215 O ASN 26 -5.196 -8.441 -7.081 1.00267.20 O ATOM 216 N HIS 27 -3.654 -10.043 -6.672 1.00147.44 N ATOM 217 CA HIS 27 -3.058 -9.265 -5.625 1.00147.44 C ATOM 218 ND1 HIS 27 0.649 -10.179 -5.539 1.00147.44 N ATOM 219 CG HIS 27 -0.671 -10.156 -5.934 1.00147.44 C ATOM 220 CB HIS 27 -1.817 -9.928 -4.989 1.00147.44 C ATOM 221 NE2 HIS 27 0.638 -10.565 -7.728 1.00147.44 N ATOM 222 CD2 HIS 27 -0.659 -10.393 -7.276 1.00147.44 C ATOM 223 CE1 HIS 27 1.388 -10.429 -6.649 1.00147.44 C ATOM 224 C HIS 27 -2.666 -7.936 -6.165 1.00147.44 C ATOM 225 O HIS 27 -1.766 -7.824 -6.996 1.00147.44 O ATOM 226 N CYS 28 -3.372 -6.881 -5.713 1.00 82.96 N ATOM 227 CA CYS 28 -3.004 -5.568 -6.132 1.00 82.96 C ATOM 228 CB CYS 28 -3.835 -5.024 -7.309 1.00 82.96 C ATOM 229 SG CYS 28 -3.257 -3.395 -7.877 1.00 82.96 S ATOM 230 C CYS 28 -3.223 -4.670 -4.968 1.00 82.96 C ATOM 231 O CYS 28 -4.303 -4.644 -4.378 1.00 82.96 O ATOM 232 N VAL 29 -2.183 -3.909 -4.598 1.00 60.73 N ATOM 233 CA VAL 29 -2.345 -2.970 -3.538 1.00 60.73 C ATOM 234 CB VAL 29 -1.544 -3.284 -2.310 1.00 60.73 C ATOM 235 CG1 VAL 29 -1.733 -2.128 -1.309 1.00 60.73 C ATOM 236 CG2 VAL 29 -2.004 -4.646 -1.755 1.00 60.73 C ATOM 237 C VAL 29 -1.868 -1.682 -4.095 1.00 60.73 C ATOM 238 O VAL 29 -0.958 -1.657 -4.924 1.00 60.73 O ATOM 239 N GLU 30 -2.509 -0.572 -3.698 1.00220.95 N ATOM 240 CA GLU 30 -2.053 0.657 -4.254 1.00220.95 C ATOM 241 CB GLU 30 -3.058 1.320 -5.210 1.00220.95 C ATOM 242 CG GLU 30 -4.453 1.544 -4.636 1.00220.95 C ATOM 243 CD GLU 30 -5.357 1.829 -5.827 1.00220.95 C ATOM 244 OE1 GLU 30 -4.878 1.646 -6.979 1.00220.95 O ATOM 245 OE2 GLU 30 -6.531 2.226 -5.609 1.00220.95 O ATOM 246 C GLU 30 -1.680 1.591 -3.159 1.00220.95 C ATOM 247 O GLU 30 -2.359 1.708 -2.140 1.00220.95 O ATOM 248 N VAL 31 -0.539 2.265 -3.378 1.00 74.09 N ATOM 249 CA VAL 31 -0.013 3.202 -2.443 1.00 74.09 C ATOM 250 CB VAL 31 1.471 3.042 -2.323 1.00 74.09 C ATOM 251 CG1 VAL 31 2.038 4.059 -1.327 1.00 74.09 C ATOM 252 CG2 VAL 31 1.723 1.582 -1.912 1.00 74.09 C ATOM 253 C VAL 31 -0.341 4.532 -3.009 1.00 74.09 C ATOM 254 O VAL 31 0.059 4.864 -4.123 1.00 74.09 O ATOM 255 N ARG 32 -1.101 5.337 -2.244 1.00125.21 N ATOM 256 CA ARG 32 -1.518 6.571 -2.817 1.00125.21 C ATOM 257 CB ARG 32 -3.015 6.559 -3.114 1.00125.21 C ATOM 258 CG ARG 32 -3.576 7.820 -3.752 1.00125.21 C ATOM 259 CD ARG 32 -4.990 7.560 -4.261 1.00125.21 C ATOM 260 NE ARG 32 -5.660 8.860 -4.514 1.00125.21 N ATOM 261 CZ ARG 32 -6.840 8.853 -5.195 1.00125.21 C ATOM 262 NH1 ARG 32 -7.280 7.694 -5.764 1.00125.21 N ATOM 263 NH2 ARG 32 -7.588 9.991 -5.294 1.00125.21 N ATOM 264 C ARG 32 -1.239 7.669 -1.864 1.00125.21 C ATOM 265 O ARG 32 -1.595 7.601 -0.689 1.00125.21 O ATOM 266 N CYS 33 -0.598 8.728 -2.381 1.00 91.44 N ATOM 267 CA CYS 33 -0.323 9.883 -1.594 1.00 91.44 C ATOM 268 CB CYS 33 1.076 10.476 -1.816 1.00 91.44 C ATOM 269 SG CYS 33 1.395 10.856 -3.561 1.00 91.44 S ATOM 270 C CYS 33 -1.331 10.869 -2.040 1.00 91.44 C ATOM 271 O CYS 33 -1.948 10.692 -3.089 1.00 91.44 O ATOM 272 N SER 34 -1.536 11.924 -1.237 1.00141.25 N ATOM 273 CA SER 34 -2.569 12.851 -1.567 1.00141.25 C ATOM 274 CB SER 34 -2.680 14.014 -0.568 1.00141.25 C ATOM 275 OG SER 34 -1.472 14.758 -0.532 1.00141.25 O ATOM 276 C SER 34 -2.326 13.394 -2.938 1.00141.25 C ATOM 277 O SER 34 -3.266 13.525 -3.720 1.00141.25 O ATOM 278 N ASP 35 -1.066 13.698 -3.300 1.00129.04 N ATOM 279 CA ASP 35 -0.879 14.258 -4.607 1.00129.04 C ATOM 280 CB ASP 35 0.571 14.695 -4.886 1.00129.04 C ATOM 281 CG ASP 35 0.566 15.619 -6.097 1.00129.04 C ATOM 282 OD1 ASP 35 -0.539 16.067 -6.505 1.00129.04 O ATOM 283 OD2 ASP 35 1.676 15.891 -6.626 1.00129.04 O ATOM 284 C ASP 35 -1.277 13.261 -5.665 1.00129.04 C ATOM 285 O ASP 35 -2.063 13.590 -6.553 1.00129.04 O ATOM 286 N THR 36 -0.779 12.003 -5.597 1.00283.00 N ATOM 287 CA THR 36 -1.093 11.064 -6.648 1.00283.00 C ATOM 288 CB THR 36 -0.173 11.182 -7.833 1.00283.00 C ATOM 289 OG1 THR 36 -0.681 10.438 -8.932 1.00283.00 O ATOM 290 CG2 THR 36 1.218 10.663 -7.429 1.00283.00 C ATOM 291 C THR 36 -1.002 9.661 -6.111 1.00283.00 C ATOM 292 O THR 36 -0.721 9.460 -4.933 1.00283.00 O ATOM 293 N LYS 37 -1.248 8.644 -6.973 1.00379.85 N ATOM 294 CA LYS 37 -1.225 7.280 -6.508 1.00379.85 C ATOM 295 CB LYS 37 -2.584 6.573 -6.630 1.00379.85 C ATOM 296 CG LYS 37 -2.868 6.125 -8.066 1.00379.85 C ATOM 297 CD LYS 37 -2.764 7.263 -9.081 1.00379.85 C ATOM 298 CE LYS 37 -2.706 6.777 -10.527 1.00379.85 C ATOM 299 NZ LYS 37 -3.956 6.058 -10.853 1.00379.85 N ATOM 300 C LYS 37 -0.290 6.490 -7.373 1.00379.85 C ATOM 301 O LYS 37 0.059 6.906 -8.477 1.00379.85 O ATOM 302 N TYR 38 0.159 5.325 -6.853 1.00298.65 N ATOM 303 CA TYR 38 0.973 4.375 -7.564 1.00298.65 C ATOM 304 CB TYR 38 2.435 4.255 -7.082 1.00298.65 C ATOM 305 CG TYR 38 3.142 5.544 -7.344 1.00298.65 C ATOM 306 CD1 TYR 38 3.738 5.793 -8.559 1.00298.65 C ATOM 307 CD2 TYR 38 3.211 6.509 -6.366 1.00298.65 C ATOM 308 CE1 TYR 38 4.385 6.985 -8.798 1.00298.65 C ATOM 309 CE2 TYR 38 3.857 7.702 -6.595 1.00298.65 C ATOM 310 CZ TYR 38 4.446 7.941 -7.812 1.00298.65 C ATOM 311 OH TYR 38 5.108 9.165 -8.047 1.00298.65 O ATOM 312 C TYR 38 0.338 3.040 -7.331 1.00298.65 C ATOM 313 O TYR 38 -0.333 2.842 -6.320 1.00298.65 O ATOM 314 N THR 39 0.512 2.091 -8.273 1.00285.29 N ATOM 315 CA THR 39 -0.081 0.796 -8.097 1.00285.29 C ATOM 316 CB THR 39 -1.056 0.412 -9.167 1.00285.29 C ATOM 317 OG1 THR 39 -1.676 -0.827 -8.846 1.00285.29 O ATOM 318 CG2 THR 39 -0.290 0.292 -10.493 1.00285.29 C ATOM 319 C THR 39 1.019 -0.209 -8.142 1.00285.29 C ATOM 320 O THR 39 2.057 0.011 -8.766 1.00285.29 O ATOM 321 N LEU 40 0.811 -1.344 -7.448 1.00116.56 N ATOM 322 CA LEU 40 1.807 -2.371 -7.421 1.00116.56 C ATOM 323 CB LEU 40 2.024 -2.972 -6.024 1.00116.56 C ATOM 324 CG LEU 40 2.591 -1.966 -5.005 1.00116.56 C ATOM 325 CD1 LEU 40 1.638 -0.773 -4.803 1.00116.56 C ATOM 326 CD2 LEU 40 2.955 -2.665 -3.683 1.00116.56 C ATOM 327 C LEU 40 1.358 -3.469 -8.328 1.00116.56 C ATOM 328 O LEU 40 0.182 -3.832 -8.355 1.00116.56 O ATOM 329 N CYS 41 2.304 -4.015 -9.115 1.00 61.18 N ATOM 330 CA CYS 41 1.987 -5.078 -10.018 1.00 61.18 C ATOM 331 CB CYS 41 3.035 -5.260 -11.136 1.00 61.18 C ATOM 332 SG CYS 41 4.679 -5.752 -10.530 1.00 61.18 S ATOM 333 C CYS 41 1.914 -6.372 -9.212 1.00 61.18 C ATOM 334 O CYS 41 0.871 -7.073 -9.313 1.00 61.18 O ATOM 335 OXT CYS 41 2.898 -6.676 -8.485 1.00 61.18 O TER END