####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS112_5 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS112_5.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 3.95 3.95 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 17 - 37 1.91 6.83 LONGEST_CONTINUOUS_SEGMENT: 21 18 - 38 1.99 6.90 LCS_AVERAGE: 49.02 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 2 - 16 0.85 6.19 LCS_AVERAGE: 23.80 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 20 41 3 3 3 4 14 23 26 28 32 36 38 39 40 41 41 41 41 41 41 41 LCS_GDT Q 2 Q 2 15 20 41 5 12 15 18 22 24 26 28 30 34 37 38 40 41 41 41 41 41 41 41 LCS_GDT E 3 E 3 15 20 41 5 11 15 18 22 24 26 28 32 36 38 39 40 41 41 41 41 41 41 41 LCS_GDT T 4 T 4 15 20 41 5 12 15 18 22 24 26 28 32 36 38 39 40 41 41 41 41 41 41 41 LCS_GDT R 5 R 5 15 20 41 8 12 15 18 22 24 26 28 32 36 38 39 40 41 41 41 41 41 41 41 LCS_GDT K 6 K 6 15 20 41 8 12 15 18 22 24 26 28 32 36 38 39 40 41 41 41 41 41 41 41 LCS_GDT K 7 K 7 15 20 41 8 12 15 18 22 24 26 28 32 36 38 39 40 41 41 41 41 41 41 41 LCS_GDT C 8 C 8 15 20 41 8 12 15 18 22 24 26 28 32 36 38 39 40 41 41 41 41 41 41 41 LCS_GDT T 9 T 9 15 20 41 8 12 15 18 22 24 26 28 32 36 38 39 40 41 41 41 41 41 41 41 LCS_GDT E 10 E 10 15 20 41 8 12 15 18 22 24 26 28 32 36 38 39 40 41 41 41 41 41 41 41 LCS_GDT M 11 M 11 15 20 41 8 12 15 18 22 24 26 28 32 36 38 39 40 41 41 41 41 41 41 41 LCS_GDT K 12 K 12 15 20 41 8 12 15 18 22 24 26 28 32 36 38 39 40 41 41 41 41 41 41 41 LCS_GDT K 13 K 13 15 20 41 5 12 15 18 22 24 26 28 32 36 38 39 40 41 41 41 41 41 41 41 LCS_GDT K 14 K 14 15 20 41 8 12 15 18 22 24 26 28 32 36 38 39 40 41 41 41 41 41 41 41 LCS_GDT F 15 F 15 15 20 41 8 11 15 18 22 24 26 28 32 36 38 39 40 41 41 41 41 41 41 41 LCS_GDT K 16 K 16 15 20 41 4 5 15 18 22 24 26 28 32 36 38 39 40 41 41 41 41 41 41 41 LCS_GDT N 17 N 17 7 21 41 3 9 14 18 22 24 26 28 32 36 38 39 40 41 41 41 41 41 41 41 LCS_GDT C 18 C 18 7 21 41 6 10 14 18 22 24 26 28 32 36 38 39 40 41 41 41 41 41 41 41 LCS_GDT E 19 E 19 7 21 41 5 10 14 18 22 24 26 28 32 36 38 39 40 41 41 41 41 41 41 41 LCS_GDT V 20 V 20 7 21 41 5 10 14 17 20 23 24 27 32 36 38 39 40 41 41 41 41 41 41 41 LCS_GDT R 21 R 21 7 21 41 6 10 14 17 20 23 24 27 31 36 38 39 40 41 41 41 41 41 41 41 LCS_GDT C 22 C 22 7 21 41 5 10 14 17 20 23 24 27 30 32 37 39 40 41 41 41 41 41 41 41 LCS_GDT D 23 D 23 7 21 41 4 10 13 17 20 23 24 25 29 32 34 38 40 41 41 41 41 41 41 41 LCS_GDT E 24 E 24 6 21 41 3 5 14 17 20 23 24 27 30 32 38 39 40 41 41 41 41 41 41 41 LCS_GDT S 25 S 25 6 21 41 3 5 14 17 20 23 24 27 32 36 38 39 40 41 41 41 41 41 41 41 LCS_GDT N 26 N 26 6 21 41 3 4 9 16 17 19 24 27 32 36 38 39 40 41 41 41 41 41 41 41 LCS_GDT H 27 H 27 8 21 41 3 9 14 17 20 23 24 27 32 36 38 39 40 41 41 41 41 41 41 41 LCS_GDT C 28 C 28 8 21 41 6 10 14 17 20 23 24 27 32 36 38 39 40 41 41 41 41 41 41 41 LCS_GDT V 29 V 29 8 21 41 6 10 14 17 20 23 24 27 32 36 38 39 40 41 41 41 41 41 41 41 LCS_GDT E 30 E 30 8 21 41 6 10 14 17 20 23 26 28 32 36 38 39 40 41 41 41 41 41 41 41 LCS_GDT V 31 V 31 8 21 41 6 10 14 18 22 24 26 28 32 36 38 39 40 41 41 41 41 41 41 41 LCS_GDT R 32 R 32 8 21 41 6 10 14 18 22 24 26 28 32 36 38 39 40 41 41 41 41 41 41 41 LCS_GDT C 33 C 33 8 21 41 6 10 14 18 22 24 26 28 32 36 38 39 40 41 41 41 41 41 41 41 LCS_GDT S 34 S 34 8 21 41 5 9 14 17 20 23 24 28 32 36 38 39 40 41 41 41 41 41 41 41 LCS_GDT D 35 D 35 5 21 41 4 5 8 14 20 23 24 25 26 32 38 39 40 41 41 41 41 41 41 41 LCS_GDT T 36 T 36 6 21 41 4 6 8 16 20 23 24 27 32 36 38 39 40 41 41 41 41 41 41 41 LCS_GDT K 37 K 37 6 21 41 4 6 6 10 17 22 24 27 32 36 38 39 40 41 41 41 41 41 41 41 LCS_GDT Y 38 Y 38 6 21 41 4 6 8 14 20 23 25 28 32 36 38 39 40 41 41 41 41 41 41 41 LCS_GDT T 39 T 39 6 14 41 4 6 8 17 22 24 26 28 32 36 38 39 40 41 41 41 41 41 41 41 LCS_GDT L 40 L 40 6 14 41 4 6 7 14 22 24 26 28 32 36 38 39 40 41 41 41 41 41 41 41 LCS_GDT C 41 C 41 6 14 41 3 6 6 13 20 24 26 28 32 36 38 39 40 41 41 41 41 41 41 41 LCS_AVERAGE LCS_A: 57.60 ( 23.80 49.02 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 12 15 18 22 24 26 28 32 36 38 39 40 41 41 41 41 41 41 41 GDT PERCENT_AT 19.51 29.27 36.59 43.90 53.66 58.54 63.41 68.29 78.05 87.80 92.68 95.12 97.56 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.31 0.63 0.85 1.27 1.55 1.86 2.09 2.37 3.09 3.46 3.67 3.76 3.82 3.95 3.95 3.95 3.95 3.95 3.95 3.95 GDT RMS_ALL_AT 6.84 6.74 6.19 5.32 5.22 5.02 4.83 4.67 4.24 4.00 3.96 3.96 3.96 3.95 3.95 3.95 3.95 3.95 3.95 3.95 # Checking swapping # possible swapping detected: E 10 E 10 # possible swapping detected: F 15 F 15 # possible swapping detected: D 23 D 23 # possible swapping detected: E 24 E 24 # possible swapping detected: E 30 E 30 # possible swapping detected: D 35 D 35 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 3.421 0 0.091 0.115 5.888 12.727 9.697 4.725 LGA Q 2 Q 2 1.719 0 0.266 0.928 2.996 61.818 53.131 1.919 LGA E 3 E 3 1.545 0 0.083 1.069 5.017 54.545 32.727 4.962 LGA T 4 T 4 1.777 0 0.047 1.139 4.106 50.909 41.039 4.106 LGA R 5 R 5 1.235 0 0.063 1.706 10.065 65.455 32.397 10.065 LGA K 6 K 6 0.735 0 0.042 1.334 6.701 81.818 48.485 6.690 LGA K 7 K 7 1.661 0 0.013 0.531 3.397 54.545 45.051 2.132 LGA C 8 C 8 1.847 0 0.054 0.082 2.632 58.182 49.697 2.632 LGA T 9 T 9 1.012 0 0.057 1.087 2.349 69.545 60.000 2.349 LGA E 10 E 10 0.959 0 0.045 1.047 6.791 86.364 46.061 6.791 LGA M 11 M 11 1.354 0 0.096 1.620 4.369 69.545 52.955 4.369 LGA K 12 K 12 2.075 0 0.072 0.652 4.721 48.182 33.131 4.721 LGA K 13 K 13 2.014 0 0.037 0.696 7.080 47.727 27.475 7.080 LGA K 14 K 14 0.985 0 0.082 0.578 2.500 77.727 68.485 0.493 LGA F 15 F 15 1.365 0 0.466 0.681 4.221 47.727 71.240 0.463 LGA K 16 K 16 1.930 0 0.502 1.177 6.156 55.000 28.687 6.156 LGA N 17 N 17 2.572 0 0.625 1.110 6.780 42.273 23.409 3.993 LGA C 18 C 18 2.719 0 0.057 0.841 5.991 30.000 21.818 5.991 LGA E 19 E 19 1.993 0 0.253 0.744 4.387 45.000 33.737 3.628 LGA V 20 V 20 5.096 0 0.088 1.093 8.175 1.364 0.779 7.121 LGA R 21 R 21 6.439 0 0.035 1.310 10.274 0.000 0.000 9.367 LGA C 22 C 22 8.741 0 0.098 0.186 9.024 0.000 0.000 8.506 LGA D 23 D 23 10.553 0 0.608 0.687 13.431 0.000 0.000 9.112 LGA E 24 E 24 10.000 0 0.252 0.801 11.022 0.000 0.000 8.921 LGA S 25 S 25 8.669 0 0.608 0.572 9.879 0.000 0.000 9.879 LGA N 26 N 26 6.647 0 0.190 0.996 11.142 0.000 0.000 11.142 LGA H 27 H 27 7.333 0 0.091 0.227 8.586 0.000 0.000 7.862 LGA C 28 C 28 6.513 0 0.058 0.772 6.983 0.000 0.000 6.223 LGA V 29 V 29 6.152 0 0.132 0.154 7.247 0.000 0.000 6.540 LGA E 30 E 30 4.113 0 0.073 1.049 4.841 5.909 6.869 4.115 LGA V 31 V 31 2.765 0 0.000 1.093 5.553 40.455 28.312 5.553 LGA R 32 R 32 0.872 0 0.206 1.176 5.793 62.273 37.355 5.751 LGA C 33 C 33 2.299 0 0.504 0.861 3.916 31.818 28.788 2.591 LGA S 34 S 34 4.657 0 0.539 0.591 9.031 3.182 5.455 3.210 LGA D 35 D 35 7.793 0 0.235 1.034 9.924 0.000 0.000 7.384 LGA T 36 T 36 5.975 0 0.227 1.022 6.792 2.727 1.558 6.792 LGA K 37 K 37 5.734 0 0.035 1.656 8.843 0.000 0.000 8.843 LGA Y 38 Y 38 3.985 0 0.067 1.225 7.890 23.636 11.212 7.890 LGA T 39 T 39 2.087 0 0.109 0.109 4.271 38.636 28.052 4.271 LGA L 40 L 40 2.447 0 0.085 0.940 6.528 29.545 17.045 5.173 LGA C 41 C 41 3.748 0 0.472 0.808 6.608 10.455 15.325 2.095 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 3.955 3.989 4.614 31.929 23.414 11.885 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 28 2.37 60.366 61.527 1.132 LGA_LOCAL RMSD: 2.373 Number of atoms: 28 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 4.674 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 3.955 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.274061 * X + -0.950420 * Y + 0.146943 * Z + 29.101084 Y_new = -0.956384 * X + -0.285404 * Y + -0.062240 * Z + 329.320984 Z_new = 0.101092 * X + -0.123476 * Y + -0.987185 * Z + 23.173267 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.291715 -0.101265 -3.017160 [DEG: -74.0098 -5.8020 -172.8705 ] ZXZ: 1.170143 2.981327 2.455544 [DEG: 67.0443 170.8175 140.6923 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS112_5 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS112_5.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 28 2.37 61.527 3.95 REMARK ---------------------------------------------------------- MOLECULE T0955TS112_5 PFRMAT TS TARGET T0955 MODEL 5 PARENT N/A ATOM 1 N SER 1 -3.201 -11.527 -0.221 1.00 8.30 N ATOM 2 CA SER 1 -2.075 -12.439 0.092 1.00 8.25 C ATOM 3 CB SER 1 -1.136 -12.561 -1.119 1.00 8.41 C ATOM 4 OG SER 1 -1.835 -13.112 -2.224 1.00 8.71 O ATOM 5 C SER 1 -1.295 -11.898 1.241 1.00 7.46 C ATOM 6 O SER 1 -1.251 -10.689 1.461 1.00 7.08 O ATOM 7 N GLN 2 -0.684 -12.798 2.029 1.00 7.29 N ATOM 8 CA GLN 2 0.093 -12.373 3.153 1.00 6.76 C ATOM 9 CB GLN 2 0.611 -13.560 3.985 1.00 6.95 C ATOM 10 CG GLN 2 1.285 -13.146 5.294 1.00 7.21 C ATOM 11 CD GLN 2 0.177 -12.762 6.260 1.00 7.76 C ATOM 12 OE1 GLN 2 -0.906 -13.346 6.236 1.00 8.15 O ATOM 13 NE2 GLN 2 0.448 -11.754 7.133 1.00 8.03 N ATOM 14 C GLN 2 1.287 -11.644 2.631 1.00 5.63 C ATOM 15 O GLN 2 1.661 -10.586 3.136 1.00 5.18 O ATOM 16 N GLU 3 1.900 -12.204 1.575 1.00 5.26 N ATOM 17 CA GLU 3 3.102 -11.681 0.995 1.00 4.32 C ATOM 18 CB GLU 3 3.581 -12.554 -0.177 1.00 4.35 C ATOM 19 CG GLU 3 4.859 -12.069 -0.859 1.00 4.45 C ATOM 20 CD GLU 3 5.156 -13.046 -1.989 1.00 4.63 C ATOM 21 OE1 GLU 3 4.364 -14.015 -2.146 1.00 4.54 O ATOM 22 OE2 GLU 3 6.164 -12.836 -2.714 1.00 5.21 O ATOM 23 C GLU 3 2.826 -10.328 0.443 1.00 4.24 C ATOM 24 O GLU 3 3.601 -9.391 0.633 1.00 3.52 O ATOM 25 N THR 4 1.697 -10.193 -0.267 1.00 5.10 N ATOM 26 CA THR 4 1.362 -8.951 -0.886 1.00 5.21 C ATOM 27 CB THR 4 0.131 -9.044 -1.739 1.00 6.32 C ATOM 28 OG1 THR 4 0.316 -10.014 -2.759 1.00 6.70 O ATOM 29 CG2 THR 4 -0.142 -7.666 -2.362 1.00 7.07 C ATOM 30 C THR 4 1.087 -7.931 0.166 1.00 4.88 C ATOM 31 O THR 4 1.481 -6.775 0.034 1.00 4.37 O ATOM 32 N ARG 5 0.399 -8.345 1.245 1.00 5.34 N ATOM 33 CA ARG 5 -0.017 -7.461 2.296 1.00 5.39 C ATOM 34 CB ARG 5 -0.780 -8.191 3.413 1.00 6.34 C ATOM 35 CG ARG 5 -0.818 -7.394 4.720 1.00 7.07 C ATOM 36 CD ARG 5 -1.248 -8.215 5.938 1.00 8.03 C ATOM 37 NE ARG 5 -0.878 -7.436 7.155 1.00 8.32 N ATOM 38 CZ ARG 5 -1.732 -6.512 7.683 1.00 8.78 C ATOM 39 NH1 ARG 5 -2.956 -6.305 7.117 1.00 8.99 N ATOM 40 NH2 ARG 5 -1.357 -5.793 8.784 1.00 9.27 N ATOM 41 C ARG 5 1.146 -6.821 2.981 1.00 4.45 C ATOM 42 O ARG 5 1.132 -5.618 3.234 1.00 4.17 O ATOM 43 N LYS 6 2.189 -7.604 3.291 1.00 4.05 N ATOM 44 CA LYS 6 3.267 -7.126 4.107 1.00 3.50 C ATOM 45 CB LYS 6 4.297 -8.229 4.389 1.00 3.46 C ATOM 46 CG LYS 6 3.694 -9.394 5.175 1.00 4.05 C ATOM 47 CD LYS 6 4.551 -10.660 5.169 1.00 4.15 C ATOM 48 CE LYS 6 3.929 -11.806 5.969 1.00 4.82 C ATOM 49 NZ LYS 6 4.806 -12.996 5.916 1.00 5.24 N ATOM 50 C LYS 6 3.981 -5.981 3.469 1.00 2.61 C ATOM 51 O LYS 6 4.272 -4.986 4.127 1.00 2.50 O ATOM 52 N LYS 7 4.281 -6.079 2.167 1.00 2.36 N ATOM 53 CA LYS 7 5.043 -5.052 1.524 1.00 2.09 C ATOM 54 CB LYS 7 5.444 -5.428 0.088 1.00 2.83 C ATOM 55 CG LYS 7 6.384 -4.411 -0.562 1.00 3.38 C ATOM 56 CD LYS 7 7.163 -4.973 -1.753 1.00 4.10 C ATOM 57 CE LYS 7 6.340 -5.889 -2.659 1.00 4.77 C ATOM 58 NZ LYS 7 7.175 -6.364 -3.784 1.00 5.44 N ATOM 59 C LYS 7 4.266 -3.776 1.504 1.00 2.11 C ATOM 60 O LYS 7 4.827 -2.693 1.654 1.00 1.89 O ATOM 61 N CYS 8 2.943 -3.874 1.304 1.00 2.75 N ATOM 62 CA CYS 8 2.121 -2.705 1.208 1.00 2.98 C ATOM 63 CB CYS 8 0.661 -3.034 0.854 1.00 4.08 C ATOM 64 SG CYS 8 -0.379 -1.548 0.737 1.00 5.11 S ATOM 65 C CYS 8 2.113 -1.962 2.505 1.00 2.50 C ATOM 66 O CYS 8 2.222 -0.739 2.526 1.00 2.18 O ATOM 67 N THR 9 1.990 -2.677 3.635 1.00 2.86 N ATOM 68 CA THR 9 1.906 -2.006 4.899 1.00 3.22 C ATOM 69 CB THR 9 1.645 -2.942 6.047 1.00 4.17 C ATOM 70 OG1 THR 9 1.445 -2.206 7.242 1.00 4.64 O ATOM 71 CG2 THR 9 2.828 -3.915 6.200 1.00 4.59 C ATOM 72 C THR 9 3.178 -1.274 5.160 1.00 2.78 C ATOM 73 O THR 9 3.157 -0.128 5.605 1.00 3.03 O ATOM 74 N GLU 10 4.327 -1.913 4.888 1.00 2.48 N ATOM 75 CA GLU 10 5.588 -1.291 5.144 1.00 2.88 C ATOM 76 CB GLU 10 6.783 -2.227 4.899 1.00 3.04 C ATOM 77 CG GLU 10 6.900 -3.351 5.929 1.00 3.85 C ATOM 78 CD GLU 10 7.275 -2.729 7.270 1.00 4.46 C ATOM 79 OE1 GLU 10 7.436 -1.482 7.325 1.00 4.58 O ATOM 80 OE2 GLU 10 7.410 -3.500 8.258 1.00 5.20 O ATOM 81 C GLU 10 5.749 -0.113 4.244 1.00 2.65 C ATOM 82 O GLU 10 6.207 0.940 4.676 1.00 3.32 O ATOM 83 N MET 11 5.373 -0.265 2.964 1.00 2.03 N ATOM 84 CA MET 11 5.510 0.787 1.998 1.00 2.34 C ATOM 85 CB MET 11 5.079 0.316 0.591 1.00 2.61 C ATOM 86 CG MET 11 5.053 1.397 -0.494 1.00 3.39 C ATOM 87 SD MET 11 3.595 2.484 -0.429 1.00 4.65 S ATOM 88 CE MET 11 2.403 1.192 -0.882 1.00 5.06 C ATOM 89 C MET 11 4.650 1.945 2.401 1.00 2.06 C ATOM 90 O MET 11 5.076 3.096 2.372 1.00 2.57 O ATOM 91 N LYS 12 3.406 1.667 2.812 1.00 1.64 N ATOM 92 CA LYS 12 2.484 2.710 3.156 1.00 1.78 C ATOM 93 CB LYS 12 1.102 2.148 3.532 1.00 2.46 C ATOM 94 CG LYS 12 0.060 3.204 3.909 1.00 3.06 C ATOM 95 CD LYS 12 -1.356 2.628 4.013 1.00 3.84 C ATOM 96 CE LYS 12 -2.421 3.660 4.391 1.00 4.70 C ATOM 97 NZ LYS 12 -3.749 3.012 4.475 1.00 5.37 N ATOM 98 C LYS 12 3.006 3.450 4.345 1.00 2.47 C ATOM 99 O LYS 12 2.951 4.674 4.407 1.00 2.66 O ATOM 100 N LYS 13 3.540 2.715 5.326 1.00 3.15 N ATOM 101 CA LYS 13 3.998 3.324 6.538 1.00 4.21 C ATOM 102 CB LYS 13 4.506 2.291 7.556 1.00 5.02 C ATOM 103 CG LYS 13 3.403 1.432 8.185 1.00 5.98 C ATOM 104 CD LYS 13 2.427 2.231 9.052 1.00 6.78 C ATOM 105 CE LYS 13 1.404 1.362 9.788 1.00 7.50 C ATOM 106 NZ LYS 13 0.617 2.189 10.732 1.00 8.07 N ATOM 107 C LYS 13 5.127 4.261 6.247 1.00 4.50 C ATOM 108 O LYS 13 5.191 5.358 6.798 1.00 5.08 O ATOM 109 N LYS 14 6.061 3.847 5.377 1.00 4.36 N ATOM 110 CA LYS 14 7.209 4.650 5.081 1.00 5.11 C ATOM 111 CB LYS 14 8.180 3.939 4.123 1.00 5.33 C ATOM 112 CG LYS 14 8.812 2.678 4.716 1.00 6.04 C ATOM 113 CD LYS 14 9.468 1.767 3.675 1.00 6.66 C ATOM 114 CE LYS 14 10.106 0.515 4.281 1.00 7.33 C ATOM 115 NZ LYS 14 10.486 -0.426 3.205 1.00 7.82 N ATOM 116 C LYS 14 6.792 5.919 4.404 1.00 4.91 C ATOM 117 O LYS 14 7.255 7.005 4.745 1.00 5.61 O ATOM 118 N PHE 15 5.882 5.827 3.424 1.00 3.99 N ATOM 119 CA PHE 15 5.575 6.999 2.665 1.00 3.93 C ATOM 120 CB PHE 15 4.730 6.725 1.412 1.00 3.30 C ATOM 121 CG PHE 15 5.668 6.059 0.461 1.00 4.05 C ATOM 122 CD1 PHE 15 6.647 6.782 -0.181 1.00 4.80 C ATOM 123 CD2 PHE 15 5.606 4.706 0.234 1.00 4.41 C ATOM 124 CE1 PHE 15 7.523 6.171 -1.050 1.00 5.75 C ATOM 125 CE2 PHE 15 6.475 4.084 -0.633 1.00 5.41 C ATOM 126 CZ PHE 15 7.435 4.820 -1.281 1.00 6.02 C ATOM 127 C PHE 15 4.945 8.065 3.498 1.00 3.89 C ATOM 128 O PHE 15 5.323 9.223 3.345 1.00 4.34 O ATOM 129 N LYS 16 3.965 7.708 4.361 1.00 3.61 N ATOM 130 CA LYS 16 3.270 8.596 5.264 1.00 3.88 C ATOM 131 CB LYS 16 3.406 10.114 5.025 1.00 4.08 C ATOM 132 CG LYS 16 3.013 10.949 6.243 1.00 4.53 C ATOM 133 CD LYS 16 3.557 12.377 6.205 1.00 4.79 C ATOM 134 CE LYS 16 3.379 13.129 7.526 1.00 5.04 C ATOM 135 NZ LYS 16 4.181 14.373 7.516 1.00 5.49 N ATOM 136 C LYS 16 1.821 8.274 5.131 1.00 4.29 C ATOM 137 O LYS 16 1.377 7.173 5.449 1.00 4.68 O ATOM 138 N ASN 17 1.030 9.254 4.663 1.00 4.44 N ATOM 139 CA ASN 17 -0.369 8.996 4.523 1.00 4.89 C ATOM 140 CB ASN 17 -1.256 10.234 4.750 1.00 5.80 C ATOM 141 CG ASN 17 -1.270 10.565 6.235 1.00 6.32 C ATOM 142 OD1 ASN 17 -0.781 11.613 6.657 1.00 6.48 O ATOM 143 ND2 ASN 17 -1.854 9.649 7.052 1.00 6.95 N ATOM 144 C ASN 17 -0.626 8.531 3.131 1.00 4.46 C ATOM 145 O ASN 17 -0.402 9.250 2.158 1.00 4.61 O ATOM 146 N CYS 18 -1.104 7.286 2.994 1.00 4.06 N ATOM 147 CA CYS 18 -1.434 6.807 1.690 1.00 3.73 C ATOM 148 CB CYS 18 -0.824 5.438 1.350 1.00 3.35 C ATOM 149 SG CYS 18 -1.274 4.883 -0.323 1.00 3.61 S ATOM 150 C CYS 18 -2.915 6.659 1.656 1.00 3.92 C ATOM 151 O CYS 18 -3.538 6.282 2.647 1.00 4.19 O ATOM 152 N GLU 19 -3.532 6.991 0.514 1.00 3.97 N ATOM 153 CA GLU 19 -4.951 6.836 0.447 1.00 4.21 C ATOM 154 CB GLU 19 -5.689 8.065 -0.103 1.00 4.57 C ATOM 155 CG GLU 19 -5.675 9.253 0.860 1.00 4.78 C ATOM 156 CD GLU 19 -6.413 10.406 0.194 1.00 5.35 C ATOM 157 OE1 GLU 19 -7.650 10.279 -0.008 1.00 5.75 O ATOM 158 OE2 GLU 19 -5.748 11.425 -0.127 1.00 5.67 O ATOM 159 C GLU 19 -5.214 5.692 -0.468 1.00 4.09 C ATOM 160 O GLU 19 -4.642 5.595 -1.552 1.00 4.01 O ATOM 161 N VAL 20 -6.087 4.767 -0.036 1.00 4.24 N ATOM 162 CA VAL 20 -6.351 3.646 -0.879 1.00 4.27 C ATOM 163 CB VAL 20 -6.143 2.324 -0.198 1.00 4.57 C ATOM 164 CG1 VAL 20 -7.130 2.208 0.975 1.00 4.99 C ATOM 165 CG2 VAL 20 -6.303 1.210 -1.247 1.00 4.72 C ATOM 166 C VAL 20 -7.774 3.708 -1.321 1.00 4.37 C ATOM 167 O VAL 20 -8.689 3.901 -0.522 1.00 4.63 O ATOM 168 N ARG 21 -7.992 3.575 -2.641 1.00 4.31 N ATOM 169 CA ARG 21 -9.333 3.559 -3.135 1.00 4.45 C ATOM 170 CB ARG 21 -9.696 4.797 -3.974 1.00 4.57 C ATOM 171 CG ARG 21 -8.799 5.035 -5.192 1.00 4.81 C ATOM 172 CD ARG 21 -9.165 6.314 -5.946 1.00 5.40 C ATOM 173 NE ARG 21 -8.224 6.479 -7.090 1.00 5.73 N ATOM 174 CZ ARG 21 -8.073 7.705 -7.664 1.00 5.99 C ATOM 175 NH1 ARG 21 -8.771 8.776 -7.176 1.00 5.99 N ATOM 176 NH2 ARG 21 -7.225 7.872 -8.720 1.00 6.59 N ATOM 177 C ARG 21 -9.453 2.340 -3.986 1.00 4.46 C ATOM 178 O ARG 21 -8.687 2.150 -4.929 1.00 4.45 O ATOM 179 N CYS 22 -10.421 1.464 -3.660 1.00 4.63 N ATOM 180 CA CYS 22 -10.566 0.253 -4.415 1.00 4.78 C ATOM 181 CB CYS 22 -10.476 -1.020 -3.555 1.00 5.18 C ATOM 182 SG CYS 22 -8.850 -1.227 -2.769 1.00 5.55 S ATOM 183 C CYS 22 -11.920 0.243 -5.054 1.00 4.76 C ATOM 184 O CYS 22 -12.944 0.378 -4.388 1.00 4.96 O ATOM 185 N ASP 23 -11.931 0.103 -6.392 1.00 4.65 N ATOM 186 CA ASP 23 -13.106 0.035 -7.216 1.00 4.65 C ATOM 187 CB ASP 23 -12.760 0.134 -8.712 1.00 4.51 C ATOM 188 CG ASP 23 -12.179 1.518 -8.965 1.00 4.54 C ATOM 189 OD1 ASP 23 -12.763 2.508 -8.451 1.00 4.66 O ATOM 190 OD2 ASP 23 -11.145 1.603 -9.682 1.00 4.83 O ATOM 191 C ASP 23 -13.798 -1.285 -7.004 1.00 5.22 C ATOM 192 O ASP 23 -15.020 -1.382 -7.109 1.00 5.80 O ATOM 193 N GLU 24 -13.020 -2.333 -6.668 1.00 5.31 N ATOM 194 CA GLU 24 -13.491 -3.687 -6.548 1.00 5.95 C ATOM 195 CB GLU 24 -14.747 -3.844 -5.671 1.00 6.19 C ATOM 196 CG GLU 24 -14.473 -3.616 -4.182 1.00 6.51 C ATOM 197 CD GLU 24 -15.672 -4.128 -3.395 1.00 7.03 C ATOM 198 OE1 GLU 24 -15.748 -5.370 -3.192 1.00 7.18 O ATOM 199 OE2 GLU 24 -16.525 -3.295 -2.992 1.00 7.57 O ATOM 200 C GLU 24 -13.783 -4.224 -7.910 1.00 6.08 C ATOM 201 O GLU 24 -14.529 -5.188 -8.061 1.00 6.51 O ATOM 202 N SER 25 -13.159 -3.639 -8.950 1.00 5.99 N ATOM 203 CA SER 25 -13.372 -4.163 -10.266 1.00 6.42 C ATOM 204 CB SER 25 -13.824 -3.102 -11.283 1.00 6.56 C ATOM 205 OG SER 25 -15.098 -2.588 -10.922 1.00 6.60 O ATOM 206 C SER 25 -12.073 -4.726 -10.756 1.00 6.57 C ATOM 207 O SER 25 -11.057 -4.037 -10.817 1.00 6.87 O ATOM 208 N ASN 26 -12.083 -6.024 -11.108 1.00 6.74 N ATOM 209 CA ASN 26 -10.933 -6.693 -11.650 1.00 7.23 C ATOM 210 CB ASN 26 -10.463 -6.115 -12.997 1.00 7.69 C ATOM 211 CG ASN 26 -11.477 -6.501 -14.065 1.00 8.31 C ATOM 212 OD1 ASN 26 -11.190 -6.431 -15.259 1.00 8.67 O ATOM 213 ND2 ASN 26 -12.695 -6.922 -13.629 1.00 8.71 N ATOM 214 C ASN 26 -9.789 -6.625 -10.686 1.00 7.30 C ATOM 215 O ASN 26 -8.641 -6.848 -11.067 1.00 7.72 O ATOM 216 N HIS 27 -10.092 -6.381 -9.395 1.00 7.16 N ATOM 217 CA HIS 27 -9.117 -6.356 -8.336 1.00 7.48 C ATOM 218 ND1 HIS 27 -10.055 -8.908 -6.422 1.00 9.15 N ATOM 219 CG HIS 27 -9.534 -8.765 -7.690 1.00 8.61 C ATOM 220 CB HIS 27 -8.501 -7.742 -8.069 1.00 7.95 C ATOM 221 NE2 HIS 27 -11.050 -10.438 -7.693 1.00 9.80 N ATOM 222 CD2 HIS 27 -10.153 -9.708 -8.452 1.00 9.06 C ATOM 223 CE1 HIS 27 -10.956 -9.921 -6.481 1.00 9.82 C ATOM 224 C HIS 27 -7.996 -5.378 -8.567 1.00 7.02 C ATOM 225 O HIS 27 -6.825 -5.731 -8.445 1.00 7.36 O ATOM 226 N CYS 28 -8.314 -4.107 -8.901 1.00 6.28 N ATOM 227 CA CYS 28 -7.273 -3.124 -9.057 1.00 5.88 C ATOM 228 CB CYS 28 -7.330 -2.382 -10.403 1.00 5.63 C ATOM 229 SG CYS 28 -5.999 -1.158 -10.577 1.00 5.93 S ATOM 230 C CYS 28 -7.448 -2.106 -7.971 1.00 5.38 C ATOM 231 O CYS 28 -8.544 -1.599 -7.743 1.00 5.19 O ATOM 232 N VAL 29 -6.358 -1.767 -7.257 1.00 5.25 N ATOM 233 CA VAL 29 -6.496 -0.820 -6.192 1.00 4.82 C ATOM 234 CB VAL 29 -5.976 -1.317 -4.875 1.00 5.25 C ATOM 235 CG1 VAL 29 -6.113 -0.177 -3.847 1.00 5.16 C ATOM 236 CG2 VAL 29 -6.720 -2.610 -4.501 1.00 5.65 C ATOM 237 C VAL 29 -5.700 0.394 -6.540 1.00 4.29 C ATOM 238 O VAL 29 -4.615 0.309 -7.111 1.00 4.48 O ATOM 239 N GLU 30 -6.241 1.577 -6.207 1.00 3.69 N ATOM 240 CA GLU 30 -5.532 2.782 -6.511 1.00 3.24 C ATOM 241 CB GLU 30 -6.430 3.893 -7.086 1.00 2.92 C ATOM 242 CG GLU 30 -6.938 3.594 -8.497 1.00 3.23 C ATOM 243 CD GLU 30 -7.928 2.441 -8.411 1.00 3.60 C ATOM 244 OE1 GLU 30 -8.899 2.553 -7.612 1.00 3.83 O ATOM 245 OE2 GLU 30 -7.727 1.432 -9.134 1.00 4.20 O ATOM 246 C GLU 30 -4.945 3.299 -5.238 1.00 3.00 C ATOM 247 O GLU 30 -5.631 3.436 -4.227 1.00 3.00 O ATOM 248 N VAL 31 -3.632 3.587 -5.246 1.00 2.98 N ATOM 249 CA VAL 31 -3.035 4.119 -4.058 1.00 2.82 C ATOM 250 CB VAL 31 -1.926 3.269 -3.504 1.00 3.36 C ATOM 251 CG1 VAL 31 -2.513 1.909 -3.090 1.00 3.59 C ATOM 252 CG2 VAL 31 -0.802 3.169 -4.551 1.00 4.20 C ATOM 253 C VAL 31 -2.453 5.449 -4.406 1.00 2.42 C ATOM 254 O VAL 31 -1.753 5.599 -5.405 1.00 2.61 O ATOM 255 N ARG 32 -2.746 6.474 -3.591 1.00 2.15 N ATOM 256 CA ARG 32 -2.173 7.757 -3.862 1.00 2.08 C ATOM 257 CB ARG 32 -3.208 8.861 -4.155 1.00 2.25 C ATOM 258 CG ARG 32 -4.004 8.608 -5.439 1.00 2.75 C ATOM 259 CD ARG 32 -4.931 9.754 -5.859 1.00 3.04 C ATOM 260 NE ARG 32 -5.936 9.956 -4.776 1.00 3.42 N ATOM 261 CZ ARG 32 -5.724 10.898 -3.810 1.00 3.64 C ATOM 262 NH1 ARG 32 -4.616 11.693 -3.862 1.00 3.63 N ATOM 263 NH2 ARG 32 -6.629 11.055 -2.800 1.00 4.35 N ATOM 264 C ARG 32 -1.421 8.145 -2.635 1.00 2.14 C ATOM 265 O ARG 32 -1.948 8.108 -1.525 1.00 2.32 O ATOM 266 N CYS 33 -0.141 8.516 -2.780 1.00 2.28 N ATOM 267 CA CYS 33 0.523 8.874 -1.569 1.00 2.43 C ATOM 268 CB CYS 33 1.819 8.107 -1.277 1.00 2.74 C ATOM 269 SG CYS 33 2.411 8.475 0.404 1.00 3.52 S ATOM 270 C CYS 33 0.838 10.324 -1.625 1.00 2.79 C ATOM 271 O CYS 33 1.014 10.908 -2.695 1.00 3.12 O ATOM 272 N SER 34 0.913 10.950 -0.442 1.00 3.10 N ATOM 273 CA SER 34 1.163 12.353 -0.420 1.00 3.71 C ATOM 274 CB SER 34 0.548 13.073 0.794 1.00 4.18 C ATOM 275 OG SER 34 -0.870 13.001 0.748 1.00 4.26 O ATOM 276 C SER 34 2.639 12.558 -0.361 1.00 3.98 C ATOM 277 O SER 34 3.345 11.987 0.465 1.00 4.36 O ATOM 278 N ASP 35 3.139 13.410 -1.267 1.00 4.20 N ATOM 279 CA ASP 35 4.525 13.761 -1.323 1.00 4.67 C ATOM 280 CB ASP 35 5.068 14.248 0.032 1.00 4.89 C ATOM 281 CG ASP 35 4.399 15.571 0.379 1.00 5.10 C ATOM 282 OD1 ASP 35 4.356 16.464 -0.508 1.00 5.21 O ATOM 283 OD2 ASP 35 3.930 15.710 1.541 1.00 5.49 O ATOM 284 C ASP 35 5.361 12.588 -1.729 1.00 5.06 C ATOM 285 O ASP 35 6.578 12.612 -1.555 1.00 5.46 O ATOM 286 N THR 36 4.761 11.528 -2.295 1.00 5.27 N ATOM 287 CA THR 36 5.614 10.473 -2.757 1.00 5.91 C ATOM 288 CB THR 36 5.940 9.423 -1.746 1.00 6.11 C ATOM 289 OG1 THR 36 7.052 8.664 -2.194 1.00 6.25 O ATOM 290 CG2 THR 36 4.721 8.502 -1.608 1.00 6.49 C ATOM 291 C THR 36 4.909 9.783 -3.872 1.00 5.73 C ATOM 292 O THR 36 3.753 10.074 -4.170 1.00 5.22 O ATOM 293 N LYS 37 5.606 8.853 -4.548 1.00 6.43 N ATOM 294 CA LYS 37 4.924 8.146 -5.587 1.00 6.55 C ATOM 295 CB LYS 37 5.487 8.388 -6.997 1.00 7.52 C ATOM 296 CG LYS 37 5.187 9.787 -7.531 1.00 7.65 C ATOM 297 CD LYS 37 3.692 10.107 -7.599 1.00 8.22 C ATOM 298 CE LYS 37 3.392 11.528 -8.077 1.00 8.89 C ATOM 299 NZ LYS 37 1.953 11.828 -7.903 1.00 9.47 N ATOM 300 C LYS 37 5.040 6.688 -5.316 1.00 6.81 C ATOM 301 O LYS 37 6.126 6.114 -5.358 1.00 7.52 O ATOM 302 N TYR 38 3.910 6.042 -4.990 1.00 6.34 N ATOM 303 CA TYR 38 3.989 4.625 -4.845 1.00 6.60 C ATOM 304 CB TYR 38 4.046 4.116 -3.394 1.00 5.88 C ATOM 305 CG TYR 38 4.501 2.698 -3.505 1.00 6.17 C ATOM 306 CD1 TYR 38 5.845 2.413 -3.593 1.00 6.73 C ATOM 307 CD2 TYR 38 3.599 1.658 -3.537 1.00 6.19 C ATOM 308 CE1 TYR 38 6.286 1.116 -3.699 1.00 7.27 C ATOM 309 CE2 TYR 38 4.033 0.358 -3.641 1.00 6.71 C ATOM 310 CZ TYR 38 5.377 0.086 -3.725 1.00 7.23 C ATOM 311 OH TYR 38 5.821 -1.248 -3.834 1.00 7.95 O ATOM 312 C TYR 38 2.764 4.074 -5.494 1.00 6.90 C ATOM 313 O TYR 38 1.688 4.667 -5.428 1.00 6.64 O ATOM 314 N THR 39 2.900 2.940 -6.195 1.00 7.67 N ATOM 315 CA THR 39 1.742 2.350 -6.795 1.00 8.12 C ATOM 316 CB THR 39 1.712 2.468 -8.291 1.00 9.27 C ATOM 317 OG1 THR 39 1.727 3.835 -8.677 1.00 9.75 O ATOM 318 CG2 THR 39 0.438 1.785 -8.816 1.00 9.87 C ATOM 319 C THR 39 1.790 0.900 -6.470 1.00 8.04 C ATOM 320 O THR 39 2.761 0.215 -6.785 1.00 8.42 O ATOM 321 N LEU 40 0.742 0.390 -5.803 1.00 7.67 N ATOM 322 CA LEU 40 0.734 -1.008 -5.520 1.00 7.66 C ATOM 323 CB LEU 40 0.641 -1.349 -4.024 1.00 6.70 C ATOM 324 CG LEU 40 0.637 -2.866 -3.759 1.00 6.76 C ATOM 325 CD1 LEU 40 1.961 -3.514 -4.194 1.00 6.97 C ATOM 326 CD2 LEU 40 0.271 -3.182 -2.301 1.00 6.75 C ATOM 327 C LEU 40 -0.473 -1.585 -6.176 1.00 8.37 C ATOM 328 O LEU 40 -1.606 -1.215 -5.871 1.00 8.49 O ATOM 329 N CYS 41 -0.251 -2.508 -7.122 1.00 9.06 N ATOM 330 CA CYS 41 -1.368 -3.147 -7.737 1.00 9.86 C ATOM 331 CB CYS 41 -1.046 -3.756 -9.110 1.00 10.66 C ATOM 332 SG CYS 41 -0.643 -2.499 -10.359 1.00 11.22 S ATOM 333 C CYS 41 -1.688 -4.293 -6.788 1.00 9.86 C ATOM 334 O CYS 41 -0.977 -4.393 -5.749 1.00 9.88 O ATOM 335 OXT CYS 41 -2.628 -5.077 -7.078 1.00 10.05 O TER 335 OXT CYS 41 END