####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS097_3 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS097_3.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 2.09 2.09 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 40 2 - 41 1.75 2.13 LCS_AVERAGE: 96.61 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 2 - 16 0.73 2.61 LONGEST_CONTINUOUS_SEGMENT: 15 27 - 41 0.73 2.69 LCS_AVERAGE: 29.92 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 0 24 41 0 0 3 12 16 22 30 34 36 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT Q 2 Q 2 15 40 41 4 11 20 28 35 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 3 E 3 15 40 41 4 16 20 28 35 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 4 T 4 15 40 41 14 18 24 30 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 5 R 5 15 40 41 14 18 24 30 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 6 K 6 15 40 41 14 18 24 30 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 7 K 7 15 40 41 14 18 24 30 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 8 C 8 15 40 41 14 18 24 30 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 9 T 9 15 40 41 14 18 24 30 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 10 E 10 15 40 41 14 18 24 30 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT M 11 M 11 15 40 41 14 18 24 30 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 12 K 12 15 40 41 14 18 24 30 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 13 K 13 15 40 41 14 18 24 30 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 14 K 14 15 40 41 14 18 24 30 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT F 15 F 15 15 40 41 14 18 24 30 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 16 K 16 15 40 41 3 9 18 24 30 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 17 N 17 4 40 41 3 3 5 16 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 18 C 18 5 40 41 3 10 23 30 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 19 E 19 5 40 41 4 17 24 30 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 20 V 20 5 40 41 4 12 23 30 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 21 R 21 5 40 41 3 13 23 30 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 22 C 22 5 40 41 3 17 24 30 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 23 D 23 4 40 41 3 18 24 30 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 24 E 24 4 40 41 3 13 24 30 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 25 S 25 4 40 41 3 3 4 30 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT N 26 N 26 12 40 41 3 6 10 18 32 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT H 27 H 27 15 40 41 4 14 24 29 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 28 C 28 15 40 41 8 17 24 30 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 29 V 29 15 40 41 8 17 24 30 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT E 30 E 30 15 40 41 8 17 24 30 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT V 31 V 31 15 40 41 14 18 24 30 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT R 32 R 32 15 40 41 14 18 24 30 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 33 C 33 15 40 41 6 18 24 30 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT S 34 S 34 15 40 41 4 18 24 30 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT D 35 D 35 15 40 41 6 18 24 30 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 36 T 36 15 40 41 6 18 24 30 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT K 37 K 37 15 40 41 8 17 24 30 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT Y 38 Y 38 15 40 41 6 13 24 30 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT T 39 T 39 15 40 41 6 17 24 30 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT L 40 L 40 15 40 41 8 17 24 30 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_GDT C 41 C 41 15 40 41 5 17 24 30 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 LCS_AVERAGE LCS_A: 75.51 ( 29.92 96.61 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 14 18 24 30 36 39 40 40 40 40 41 41 41 41 41 41 41 41 41 41 GDT PERCENT_AT 34.15 43.90 58.54 73.17 87.80 95.12 97.56 97.56 97.56 97.56 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.30 0.57 0.96 1.27 1.51 1.68 1.75 1.75 1.75 1.75 2.09 2.09 2.09 2.09 2.09 2.09 2.09 2.09 2.09 2.09 GDT RMS_ALL_AT 2.55 2.60 2.52 2.17 2.23 2.14 2.13 2.13 2.13 2.13 2.09 2.09 2.09 2.09 2.09 2.09 2.09 2.09 2.09 2.09 # Checking swapping # possible swapping detected: F 15 F 15 # possible swapping detected: E 19 E 19 # possible swapping detected: D 23 D 23 # possible swapping detected: E 24 E 24 # possible swapping detected: D 35 D 35 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 7.913 0 0.148 0.259 10.037 0.000 0.000 9.917 LGA Q 2 Q 2 2.894 0 0.596 0.556 8.692 21.818 10.303 7.170 LGA E 3 E 3 2.827 0 0.030 1.330 4.973 32.727 19.192 4.153 LGA T 4 T 4 1.649 0 0.065 1.105 2.948 55.000 51.948 2.948 LGA R 5 R 5 1.162 0 0.036 1.271 7.181 73.636 35.207 6.074 LGA K 6 K 6 0.371 0 0.016 0.861 5.042 90.909 60.000 3.290 LGA K 7 K 7 0.648 0 0.027 0.680 3.264 86.364 57.576 3.264 LGA C 8 C 8 0.471 0 0.033 0.054 1.164 90.909 85.152 1.164 LGA T 9 T 9 0.948 0 0.028 0.044 1.295 73.636 70.130 1.136 LGA E 10 E 10 1.100 0 0.017 0.873 2.390 69.545 62.626 2.390 LGA M 11 M 11 1.019 0 0.064 1.417 5.931 69.545 55.455 5.931 LGA K 12 K 12 1.169 0 0.046 0.099 1.437 69.545 67.273 1.437 LGA K 13 K 13 1.632 0 0.033 0.581 2.974 51.364 51.919 2.974 LGA K 14 K 14 1.948 0 0.085 0.469 2.970 44.545 47.071 2.970 LGA F 15 F 15 2.010 0 0.338 0.428 2.245 38.182 44.132 2.121 LGA K 16 K 16 3.374 0 0.665 1.162 5.900 17.273 10.707 5.900 LGA N 17 N 17 2.457 0 0.615 1.174 7.440 62.727 31.591 7.440 LGA C 18 C 18 2.689 0 0.412 0.595 4.298 29.091 22.121 4.298 LGA E 19 E 19 1.449 0 0.266 1.017 3.035 65.909 54.545 2.563 LGA V 20 V 20 2.251 0 0.097 1.085 4.244 33.182 25.195 4.244 LGA R 21 R 21 2.011 0 0.214 0.838 3.263 47.727 35.372 3.263 LGA C 22 C 22 1.302 0 0.410 0.434 3.790 62.727 50.000 3.790 LGA D 23 D 23 1.556 0 0.094 1.005 3.335 61.818 46.136 2.262 LGA E 24 E 24 1.785 0 0.129 1.056 4.870 58.182 39.192 4.870 LGA S 25 S 25 2.149 0 0.528 0.726 4.407 36.818 28.485 4.407 LGA N 26 N 26 3.015 0 0.416 0.881 5.492 26.364 15.227 4.309 LGA H 27 H 27 2.653 0 0.355 1.126 7.074 45.455 19.455 7.074 LGA C 28 C 28 1.376 0 0.101 0.169 1.743 61.818 58.182 1.688 LGA V 29 V 29 0.615 0 0.086 1.055 3.168 81.818 68.312 3.168 LGA E 30 E 30 0.604 0 0.018 0.234 1.801 90.909 77.172 1.738 LGA V 31 V 31 0.643 0 0.055 1.078 3.263 90.909 73.247 1.044 LGA R 32 R 32 0.392 0 0.173 0.847 3.420 95.455 61.818 3.046 LGA C 33 C 33 0.968 0 0.477 0.558 2.649 68.182 64.848 1.837 LGA S 34 S 34 1.237 0 0.537 0.611 2.911 52.273 49.697 2.057 LGA D 35 D 35 1.431 0 0.090 1.070 6.080 61.818 40.909 6.080 LGA T 36 T 36 1.343 0 0.025 0.172 1.806 70.000 61.818 1.806 LGA K 37 K 37 0.576 0 0.142 1.324 2.753 60.455 55.758 1.552 LGA Y 38 Y 38 1.940 0 0.018 1.232 5.425 70.455 43.182 5.425 LGA T 39 T 39 1.819 0 0.149 1.053 4.059 39.545 31.429 3.175 LGA L 40 L 40 1.256 0 0.136 0.940 3.788 69.545 60.909 3.788 LGA C 41 C 41 2.035 0 0.130 0.194 3.066 47.727 39.221 3.066 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 2.086 2.071 2.843 57.949 45.915 23.326 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 40 1.75 78.659 88.155 2.160 LGA_LOCAL RMSD: 1.752 Number of atoms: 40 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.126 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 2.086 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.066236 * X + 0.801084 * Y + 0.594876 * Z + -0.211389 Y_new = 0.963185 * X + 0.104348 * Y + -0.247764 * Z + 0.208394 Z_new = -0.260554 * X + 0.589386 * Y + -0.764680 * Z + -0.877881 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.502137 0.263596 2.484936 [DEG: 86.0661 15.1029 142.3763 ] ZXZ: 1.176150 2.441341 -0.416245 [DEG: 67.3884 139.8785 -23.8491 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS097_3 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS097_3.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 40 1.75 88.155 2.09 REMARK ---------------------------------------------------------- MOLECULE T0955TS097_3 PFRMAT TS TARGET T0955 MODEL 3 PARENT N/A ATOM 1 N SER 1 -6.070 -14.863 5.800 1.00 3.43 ATOM 5 CA SER 1 -4.962 -13.885 5.665 1.00 3.43 ATOM 7 CB SER 1 -3.734 -14.290 6.477 1.00 3.43 ATOM 10 OG SER 1 -4.090 -14.197 7.843 1.00 3.43 ATOM 12 C SER 1 -4.555 -13.669 4.225 1.00 3.43 ATOM 13 O SER 1 -5.012 -14.379 3.327 1.00 3.43 ATOM 14 N GLN 2 -3.735 -12.649 3.982 1.00 1.79 ATOM 16 CA GLN 2 -3.530 -12.137 2.629 1.00 1.79 ATOM 18 CB GLN 2 -4.592 -11.070 2.425 1.00 1.79 ATOM 21 CG GLN 2 -4.936 -10.883 0.958 1.00 1.79 ATOM 24 CD GLN 2 -6.225 -10.092 0.942 1.00 1.79 ATOM 25 OE1 GLN 2 -7.306 -10.641 0.828 1.00 1.79 ATOM 26 NE2 GLN 2 -6.151 -8.794 1.154 1.00 1.79 ATOM 29 C GLN 2 -2.148 -11.549 2.428 1.00 1.79 ATOM 30 O GLN 2 -1.651 -10.806 3.267 1.00 1.79 ATOM 31 N GLU 3 -1.555 -11.802 1.259 1.00 1.33 ATOM 33 CA GLU 3 -0.186 -11.347 0.947 1.00 1.33 ATOM 35 CB GLU 3 0.300 -11.985 -0.365 1.00 1.33 ATOM 38 CG GLU 3 0.173 -13.515 -0.413 1.00 1.33 ATOM 41 CD GLU 3 0.814 -14.196 0.804 1.00 1.33 ATOM 42 OE1 GLU 3 0.086 -14.857 1.589 1.00 1.33 ATOM 43 OE2 GLU 3 2.046 -14.084 0.993 1.00 1.33 ATOM 44 C GLU 3 -0.103 -9.830 0.820 1.00 1.33 ATOM 45 O GLU 3 0.884 -9.209 1.217 1.00 1.33 ATOM 46 N THR 4 -1.176 -9.197 0.317 1.00 0.88 ATOM 48 CA THR 4 -1.230 -7.732 0.114 1.00 0.88 ATOM 50 CB THR 4 -2.521 -7.312 -0.582 1.00 0.88 ATOM 52 CG2 THR 4 -2.619 -7.865 -1.996 1.00 0.88 ATOM 56 OG1 THR 4 -3.633 -7.819 0.104 1.00 0.88 ATOM 58 C THR 4 -1.081 -6.948 1.401 1.00 0.88 ATOM 59 O THR 4 -0.513 -5.869 1.389 1.00 0.88 ATOM 60 N ARG 5 -1.446 -7.523 2.559 1.00 0.87 ATOM 62 CA ARG 5 -1.230 -6.908 3.888 1.00 0.87 ATOM 64 CB ARG 5 -1.975 -7.759 4.931 1.00 0.87 ATOM 67 CG ARG 5 -1.996 -7.081 6.317 1.00 0.87 ATOM 70 CD ARG 5 -2.851 -7.888 7.299 1.00 0.87 ATOM 73 NE ARG 5 -4.270 -7.897 6.905 1.00 0.87 ATOM 75 CZ ARG 5 -5.160 -6.944 7.132 1.00 0.87 ATOM 76 NH1 ARG 5 -4.873 -5.852 7.787 1.00 0.87 ATOM 79 NH2 ARG 5 -6.383 -7.082 6.697 1.00 0.87 ATOM 82 C ARG 5 0.256 -6.741 4.231 1.00 0.87 ATOM 83 O ARG 5 0.655 -5.706 4.743 1.00 0.87 ATOM 84 N LYS 6 1.096 -7.695 3.834 1.00 0.87 ATOM 86 CA LYS 6 2.563 -7.624 4.050 1.00 0.87 ATOM 88 CB LYS 6 3.144 -9.031 3.833 1.00 0.87 ATOM 91 CG LYS 6 4.494 -9.217 4.525 1.00 0.87 ATOM 94 CD LYS 6 4.888 -10.707 4.490 1.00 0.87 ATOM 97 CE LYS 6 6.112 -11.013 5.358 1.00 0.87 ATOM 100 NZ LYS 6 7.387 -10.539 4.746 1.00 0.87 ATOM 104 C LYS 6 3.187 -6.536 3.163 1.00 0.87 ATOM 105 O LYS 6 3.951 -5.698 3.655 1.00 0.87 ATOM 106 N LYS 7 2.757 -6.454 1.899 1.00 0.67 ATOM 108 CA LYS 7 3.133 -5.360 0.974 1.00 0.67 ATOM 110 CB LYS 7 2.690 -5.678 -0.471 1.00 0.67 ATOM 113 CG LYS 7 3.327 -6.962 -1.024 1.00 0.67 ATOM 116 CD LYS 7 2.964 -7.150 -2.500 1.00 0.67 ATOM 119 CE LYS 7 3.500 -8.497 -3.007 1.00 0.67 ATOM 122 NZ LYS 7 3.146 -8.734 -4.435 1.00 0.67 ATOM 126 C LYS 7 2.575 -4.000 1.407 1.00 0.67 ATOM 127 O LYS 7 3.255 -2.987 1.255 1.00 0.67 ATOM 128 N CYS 8 1.395 -3.970 2.022 1.00 0.58 ATOM 130 CA CYS 8 0.787 -2.759 2.583 1.00 0.58 ATOM 132 CB CYS 8 -0.577 -3.113 3.193 1.00 0.58 ATOM 135 SG CYS 8 -1.500 -1.712 3.877 1.00 0.58 ATOM 136 C CYS 8 1.674 -2.135 3.659 1.00 0.58 ATOM 137 O CYS 8 2.025 -0.963 3.552 1.00 0.58 ATOM 138 N THR 9 2.092 -2.912 4.654 1.00 0.64 ATOM 140 CA THR 9 2.959 -2.436 5.750 1.00 0.64 ATOM 142 CB THR 9 3.159 -3.553 6.778 1.00 0.64 ATOM 144 CG2 THR 9 3.882 -3.085 8.038 1.00 0.64 ATOM 148 OG1 THR 9 1.895 -4.019 7.188 1.00 0.64 ATOM 150 C THR 9 4.303 -1.947 5.211 1.00 0.64 ATOM 151 O THR 9 4.744 -0.857 5.555 1.00 0.64 ATOM 152 N GLU 10 4.904 -2.705 4.290 1.00 0.70 ATOM 154 CA GLU 10 6.146 -2.332 3.605 1.00 0.70 ATOM 156 CB GLU 10 6.496 -3.485 2.656 1.00 0.70 ATOM 159 CG GLU 10 7.812 -3.336 1.892 1.00 0.70 ATOM 162 CD GLU 10 9.069 -3.284 2.787 1.00 0.70 ATOM 163 OE1 GLU 10 9.074 -3.841 3.914 1.00 0.70 ATOM 164 OE2 GLU 10 10.086 -2.712 2.321 1.00 0.70 ATOM 165 C GLU 10 6.003 -0.990 2.850 1.00 0.70 ATOM 166 O GLU 10 6.858 -0.116 2.958 1.00 0.70 ATOM 167 N MET 11 4.887 -0.803 2.144 1.00 0.66 ATOM 169 CA MET 11 4.609 0.442 1.419 1.00 0.66 ATOM 171 CB MET 11 3.471 0.191 0.432 1.00 0.66 ATOM 174 CG MET 11 3.374 1.334 -0.589 1.00 0.66 ATOM 177 SD MET 11 2.209 1.058 -1.942 1.00 0.66 ATOM 178 CE MET 11 0.732 0.641 -0.981 1.00 0.66 ATOM 182 C MET 11 4.303 1.610 2.359 1.00 0.66 ATOM 183 O MET 11 4.769 2.710 2.090 1.00 0.66 ATOM 184 N LYS 12 3.589 1.389 3.470 1.00 0.71 ATOM 186 CA LYS 12 3.285 2.430 4.479 1.00 0.71 ATOM 188 CB LYS 12 2.217 1.928 5.459 1.00 0.71 ATOM 191 CG LYS 12 0.823 1.901 4.814 1.00 0.71 ATOM 194 CD LYS 12 -0.260 1.314 5.745 1.00 0.71 ATOM 197 CE LYS 12 -0.559 2.223 6.957 1.00 0.71 ATOM 200 NZ LYS 12 -1.661 1.687 7.804 1.00 0.71 ATOM 204 C LYS 12 4.528 2.917 5.249 1.00 0.71 ATOM 205 O LYS 12 4.533 4.045 5.738 1.00 0.71 ATOM 206 N LYS 13 5.579 2.090 5.341 1.00 0.92 ATOM 208 CA LYS 13 6.898 2.531 5.845 1.00 0.92 ATOM 210 CB LYS 13 7.785 1.315 6.144 1.00 0.92 ATOM 213 CG LYS 13 7.385 0.628 7.455 1.00 0.92 ATOM 216 CD LYS 13 8.390 -0.490 7.762 1.00 0.92 ATOM 219 CE LYS 13 8.093 -1.094 9.139 1.00 0.92 ATOM 222 NZ LYS 13 9.107 -2.124 9.503 1.00 0.92 ATOM 226 C LYS 13 7.615 3.461 4.859 1.00 0.92 ATOM 227 O LYS 13 8.213 4.447 5.279 1.00 0.92 ATOM 228 N LYS 14 7.555 3.143 3.555 1.00 1.13 ATOM 230 CA LYS 14 8.270 3.884 2.485 1.00 1.13 ATOM 232 CB LYS 14 8.504 2.945 1.298 1.00 1.13 ATOM 235 CG LYS 14 9.741 2.086 1.584 1.00 1.13 ATOM 238 CD LYS 14 9.885 0.935 0.591 1.00 1.13 ATOM 241 CE LYS 14 11.280 0.322 0.789 1.00 1.13 ATOM 244 NZ LYS 14 11.346 -1.091 0.305 1.00 1.13 ATOM 248 C LYS 14 7.551 5.155 2.050 1.00 1.13 ATOM 249 O LYS 14 8.164 6.224 2.011 1.00 1.13 ATOM 250 N PHE 15 6.257 5.051 1.757 1.00 1.23 ATOM 252 CA PHE 15 5.409 6.172 1.388 1.00 1.23 ATOM 254 CB PHE 15 4.442 5.818 0.254 1.00 1.23 ATOM 257 CG PHE 15 5.254 5.703 -1.000 1.00 1.23 ATOM 258 CD1 PHE 15 5.791 6.874 -1.563 1.00 1.23 ATOM 260 CE1 PHE 15 6.823 6.776 -2.507 1.00 1.23 ATOM 262 CZ PHE 15 7.288 5.506 -2.898 1.00 1.23 ATOM 264 CE2 PHE 15 6.711 4.346 -2.382 1.00 1.23 ATOM 266 CD2 PHE 15 5.688 4.439 -1.416 1.00 1.23 ATOM 268 C PHE 15 4.691 6.713 2.590 1.00 1.23 ATOM 269 O PHE 15 3.952 5.995 3.281 1.00 1.23 ATOM 270 N LYS 16 4.918 7.999 2.834 1.00 2.04 ATOM 272 CA LYS 16 4.350 8.669 3.979 1.00 2.04 ATOM 274 CB LYS 16 4.959 10.060 4.094 1.00 2.04 ATOM 277 CG LYS 16 4.632 10.632 5.472 1.00 2.04 ATOM 280 CD LYS 16 5.506 11.846 5.732 1.00 2.04 ATOM 283 CE LYS 16 5.231 12.314 7.159 1.00 2.04 ATOM 286 NZ LYS 16 6.137 13.431 7.528 1.00 2.04 ATOM 290 C LYS 16 2.829 8.678 3.892 1.00 2.04 ATOM 291 O LYS 16 2.225 8.710 2.823 1.00 2.04 ATOM 292 N ASN 17 2.224 8.611 5.064 1.00 1.53 ATOM 294 CA ASN 17 0.810 8.414 5.205 1.00 1.53 ATOM 296 CB ASN 17 0.536 8.371 6.706 1.00 1.53 ATOM 299 CG ASN 17 -0.953 8.286 6.896 1.00 1.53 ATOM 300 OD1 ASN 17 -1.586 7.347 6.446 1.00 1.53 ATOM 301 ND2 ASN 17 -1.557 9.287 7.488 1.00 1.53 ATOM 304 C ASN 17 -0.038 9.501 4.520 1.00 1.53 ATOM 305 O ASN 17 0.069 10.687 4.860 1.00 1.53 ATOM 306 N CYS 18 -0.952 9.059 3.652 1.00 1.77 ATOM 308 CA CYS 18 -2.076 9.858 3.172 1.00 1.77 ATOM 310 CB CYS 18 -1.676 10.584 1.888 1.00 1.77 ATOM 313 SG CYS 18 -0.611 12.042 2.100 1.00 1.77 ATOM 314 C CYS 18 -3.323 8.973 3.038 1.00 1.77 ATOM 315 O CYS 18 -4.099 8.846 3.980 1.00 1.77 ATOM 316 N GLU 19 -3.493 8.292 1.897 1.00 1.12 ATOM 318 CA GLU 19 -4.604 7.379 1.617 1.00 1.12 ATOM 320 CB GLU 19 -5.575 8.090 0.657 1.00 1.12 ATOM 323 CG GLU 19 -6.799 7.257 0.262 1.00 1.12 ATOM 326 CD GLU 19 -7.718 7.023 1.467 1.00 1.12 ATOM 327 OE1 GLU 19 -8.691 7.785 1.654 1.00 1.12 ATOM 328 OE2 GLU 19 -7.459 6.075 2.250 1.00 1.12 ATOM 329 C GLU 19 -4.046 6.079 1.020 1.00 1.12 ATOM 330 O GLU 19 -3.109 6.123 0.231 1.00 1.12 ATOM 331 N VAL 20 -4.583 4.920 1.396 1.00 1.30 ATOM 333 CA VAL 20 -3.972 3.621 1.050 1.00 1.30 ATOM 335 CB VAL 20 -3.011 3.172 2.165 1.00 1.30 ATOM 337 CG1 VAL 20 -3.708 2.862 3.490 1.00 1.30 ATOM 341 CG2 VAL 20 -2.191 1.957 1.758 1.00 1.30 ATOM 345 C VAL 20 -5.013 2.573 0.632 1.00 1.30 ATOM 346 O VAL 20 -6.076 2.445 1.233 1.00 1.30 ATOM 347 N ARG 21 -4.686 1.828 -0.428 1.00 1.02 ATOM 349 CA ARG 21 -5.527 0.870 -1.151 1.00 1.02 ATOM 351 CB ARG 21 -5.907 1.474 -2.506 1.00 1.02 ATOM 354 CG ARG 21 -7.006 2.531 -2.370 1.00 1.02 ATOM 357 CD ARG 21 -7.316 3.138 -3.736 1.00 1.02 ATOM 360 NE ARG 21 -8.598 3.859 -3.698 1.00 1.02 ATOM 362 CZ ARG 21 -9.806 3.327 -3.863 1.00 1.02 ATOM 363 NH1 ARG 21 -9.990 2.056 -4.118 1.00 1.02 ATOM 366 NH2 ARG 21 -10.862 4.080 -3.765 1.00 1.02 ATOM 369 C ARG 21 -4.773 -0.451 -1.314 1.00 1.02 ATOM 370 O ARG 21 -4.163 -0.727 -2.332 1.00 1.02 ATOM 371 N CYS 22 -4.793 -1.251 -0.246 1.00 1.15 ATOM 373 CA CYS 22 -4.108 -2.538 -0.185 1.00 1.15 ATOM 375 CB CYS 22 -3.024 -2.491 0.878 1.00 1.15 ATOM 378 SG CYS 22 -1.830 -1.166 0.632 1.00 1.15 ATOM 379 C CYS 22 -5.108 -3.658 0.066 1.00 1.15 ATOM 380 O CYS 22 -5.030 -4.382 1.055 1.00 1.15 ATOM 381 N ASP 23 -6.121 -3.739 -0.800 1.00 1.46 ATOM 383 CA ASP 23 -7.214 -4.657 -0.594 1.00 1.46 ATOM 385 CB ASP 23 -8.521 -4.025 -1.084 1.00 1.46 ATOM 388 CG ASP 23 -8.684 -3.894 -2.600 1.00 1.46 ATOM 389 OD1 ASP 23 -9.706 -3.292 -3.014 1.00 1.46 ATOM 390 OD2 ASP 23 -7.844 -4.392 -3.381 1.00 1.46 ATOM 391 C ASP 23 -6.885 -6.050 -1.168 1.00 1.46 ATOM 392 O ASP 23 -5.728 -6.453 -1.328 1.00 1.46 ATOM 393 N GLU 24 -7.923 -6.810 -1.403 1.00 3.05 ATOM 395 CA GLU 24 -7.886 -8.225 -1.713 1.00 3.05 ATOM 397 CB GLU 24 -9.244 -8.857 -1.401 1.00 3.05 ATOM 400 CG GLU 24 -9.801 -8.525 -0.007 1.00 3.05 ATOM 403 CD GLU 24 -10.226 -7.054 0.141 1.00 3.05 ATOM 404 OE1 GLU 24 -10.930 -6.533 -0.759 1.00 3.05 ATOM 405 OE2 GLU 24 -9.792 -6.395 1.114 1.00 3.05 ATOM 406 C GLU 24 -7.538 -8.499 -3.172 1.00 3.05 ATOM 407 O GLU 24 -7.399 -9.662 -3.563 1.00 3.05 ATOM 408 N SER 25 -7.424 -7.456 -3.970 1.00 2.29 ATOM 410 CA SER 25 -7.211 -7.545 -5.397 1.00 2.29 ATOM 412 CB SER 25 -7.700 -6.259 -6.063 1.00 2.29 ATOM 415 OG SER 25 -8.097 -6.558 -7.387 1.00 2.29 ATOM 417 C SER 25 -5.768 -7.913 -5.699 1.00 2.29 ATOM 418 O SER 25 -4.942 -7.097 -6.118 1.00 2.29 ATOM 419 N ASN 26 -5.474 -9.197 -5.498 1.00 1.52 ATOM 421 CA ASN 26 -4.351 -9.916 -6.066 1.00 1.52 ATOM 423 CB ASN 26 -4.673 -10.280 -7.532 1.00 1.52 ATOM 426 CG ASN 26 -5.085 -9.100 -8.418 1.00 1.52 ATOM 427 OD1 ASN 26 -6.240 -8.711 -8.462 1.00 1.52 ATOM 428 ND2 ASN 26 -4.185 -8.538 -9.182 1.00 1.52 ATOM 431 C ASN 26 -2.964 -9.312 -5.784 1.00 1.52 ATOM 432 O ASN 26 -2.462 -9.418 -4.666 1.00 1.52 ATOM 433 N HIS 27 -2.280 -8.795 -6.806 1.00 1.24 ATOM 435 CA HIS 27 -0.833 -8.583 -6.808 1.00 1.24 ATOM 437 CB HIS 27 -0.352 -8.479 -8.259 1.00 1.24 ATOM 440 CG HIS 27 -0.545 -9.713 -9.069 1.00 1.24 ATOM 441 ND1 HIS 27 -1.769 -10.163 -9.548 1.00 1.24 ATOM 442 CE1 HIS 27 -1.485 -11.244 -10.285 1.00 1.24 ATOM 444 NE2 HIS 27 -0.157 -11.465 -10.304 1.00 1.24 ATOM 446 CD2 HIS 27 0.453 -10.511 -9.538 1.00 1.24 ATOM 448 C HIS 27 -0.393 -7.306 -6.121 1.00 1.24 ATOM 449 O HIS 27 0.607 -7.297 -5.411 1.00 1.24 ATOM 450 N CYS 28 -1.102 -6.221 -6.435 1.00 0.88 ATOM 452 CA CYS 28 -0.583 -4.874 -6.311 1.00 0.88 ATOM 454 CB CYS 28 -0.784 -4.106 -7.632 1.00 0.88 ATOM 457 SG CYS 28 -0.222 -4.965 -9.127 1.00 0.88 ATOM 458 C CYS 28 -1.226 -4.130 -5.144 1.00 0.88 ATOM 459 O CYS 28 -2.374 -4.387 -4.776 1.00 0.88 ATOM 460 N VAL 29 -0.480 -3.181 -4.596 1.00 0.61 ATOM 462 CA VAL 29 -0.936 -2.293 -3.539 1.00 0.61 ATOM 464 CB VAL 29 -0.252 -2.633 -2.203 1.00 0.61 ATOM 466 CG1 VAL 29 -0.750 -3.974 -1.645 1.00 0.61 ATOM 470 CG2 VAL 29 1.278 -2.685 -2.238 1.00 0.61 ATOM 474 C VAL 29 -0.711 -0.851 -3.948 1.00 0.61 ATOM 475 O VAL 29 0.368 -0.504 -4.424 1.00 0.61 ATOM 476 N GLU 30 -1.712 0.002 -3.774 1.00 0.55 ATOM 478 CA GLU 30 -1.707 1.402 -4.198 1.00 0.55 ATOM 480 CB GLU 30 -2.850 1.622 -5.211 1.00 0.55 ATOM 483 CG GLU 30 -2.912 3.049 -5.786 1.00 0.55 ATOM 486 CD GLU 30 -4.075 3.219 -6.798 1.00 0.55 ATOM 487 OE1 GLU 30 -4.083 2.549 -7.856 1.00 0.55 ATOM 488 OE2 GLU 30 -4.973 4.056 -6.539 1.00 0.55 ATOM 489 C GLU 30 -1.746 2.335 -2.987 1.00 0.55 ATOM 490 O GLU 30 -2.378 2.050 -1.974 1.00 0.55 ATOM 491 N VAL 31 -1.088 3.488 -3.084 1.00 0.66 ATOM 493 CA VAL 31 -1.123 4.554 -2.071 1.00 0.66 ATOM 495 CB VAL 31 0.095 4.455 -1.130 1.00 0.66 ATOM 497 CG1 VAL 31 1.426 4.664 -1.823 1.00 0.66 ATOM 501 CG2 VAL 31 0.035 5.397 0.074 1.00 0.66 ATOM 505 C VAL 31 -1.247 5.896 -2.785 1.00 0.66 ATOM 506 O VAL 31 -0.736 6.072 -3.883 1.00 0.66 ATOM 507 N ARG 32 -1.954 6.845 -2.178 1.00 0.65 ATOM 509 CA ARG 32 -2.209 8.178 -2.729 1.00 0.65 ATOM 511 CB ARG 32 -3.663 8.320 -3.187 1.00 0.65 ATOM 514 CG ARG 32 -4.052 7.318 -4.264 1.00 0.65 ATOM 517 CD ARG 32 -5.487 7.629 -4.709 1.00 0.65 ATOM 520 NE ARG 32 -5.928 6.634 -5.698 1.00 0.65 ATOM 522 CZ ARG 32 -6.998 6.708 -6.463 1.00 0.65 ATOM 523 NH1 ARG 32 -7.829 7.709 -6.427 1.00 0.65 ATOM 526 NH2 ARG 32 -7.223 5.716 -7.271 1.00 0.65 ATOM 529 C ARG 32 -1.920 9.246 -1.700 1.00 0.65 ATOM 530 O ARG 32 -2.438 9.196 -0.596 1.00 0.65 ATOM 531 N CYS 33 -1.160 10.235 -2.110 1.00 0.95 ATOM 533 CA CYS 33 -1.149 11.569 -1.513 1.00 0.95 ATOM 535 CB CYS 33 0.315 12.026 -1.411 1.00 0.95 ATOM 538 SG CYS 33 1.403 10.870 -0.531 1.00 0.95 ATOM 539 C CYS 33 -2.014 12.498 -2.369 1.00 0.95 ATOM 540 O CYS 33 -2.412 12.132 -3.476 1.00 0.95 ATOM 541 N SER 34 -2.295 13.714 -1.896 1.00 1.59 ATOM 543 CA SER 34 -2.849 14.762 -2.771 1.00 1.59 ATOM 545 CB SER 34 -2.808 16.128 -2.084 1.00 1.59 ATOM 548 OG SER 34 -3.489 16.075 -0.844 1.00 1.59 ATOM 550 C SER 34 -2.023 14.840 -4.077 1.00 1.59 ATOM 551 O SER 34 -0.802 14.803 -4.017 1.00 1.59 ATOM 552 N ASP 35 -2.692 14.905 -5.232 1.00 1.63 ATOM 554 CA ASP 35 -2.068 14.954 -6.581 1.00 1.63 ATOM 556 CB ASP 35 -1.202 16.207 -6.758 1.00 1.63 ATOM 559 CG ASP 35 -1.696 17.452 -6.002 1.00 1.63 ATOM 560 OD1 ASP 35 -2.829 17.913 -6.275 1.00 1.63 ATOM 561 OD2 ASP 35 -0.954 17.994 -5.156 1.00 1.63 ATOM 562 C ASP 35 -1.265 13.724 -7.048 1.00 1.63 ATOM 563 O ASP 35 -1.076 13.550 -8.257 1.00 1.63 ATOM 564 N THR 36 -0.772 12.876 -6.142 1.00 1.07 ATOM 566 CA THR 36 0.299 11.910 -6.408 1.00 1.07 ATOM 568 CB THR 36 1.592 12.336 -5.697 1.00 1.07 ATOM 570 CG2 THR 36 2.750 11.362 -5.893 1.00 1.07 ATOM 574 OG1 THR 36 2.027 13.577 -6.219 1.00 1.07 ATOM 576 C THR 36 -0.098 10.502 -5.959 1.00 1.07 ATOM 577 O THR 36 -0.324 10.276 -4.781 1.00 1.07 ATOM 578 N LYS 37 -0.107 9.533 -6.895 1.00 1.38 ATOM 580 CA LYS 37 -0.285 8.107 -6.571 1.00 1.38 ATOM 582 CB LYS 37 -1.432 7.505 -7.399 1.00 1.38 ATOM 585 CG LYS 37 -1.073 7.306 -8.887 1.00 1.38 ATOM 588 CD LYS 37 -2.145 6.555 -9.673 1.00 1.38 ATOM 591 CE LYS 37 -3.412 7.391 -9.897 1.00 1.38 ATOM 594 NZ LYS 37 -4.353 6.703 -10.837 1.00 1.38 ATOM 598 C LYS 37 1.022 7.318 -6.698 1.00 1.38 ATOM 599 O LYS 37 1.950 7.718 -7.401 1.00 1.38 ATOM 600 N TYR 38 1.035 6.163 -6.052 1.00 1.23 ATOM 602 CA TYR 38 2.100 5.166 -6.051 1.00 1.23 ATOM 604 CB TYR 38 2.964 5.352 -4.799 1.00 1.23 ATOM 607 CG TYR 38 4.350 5.815 -5.152 1.00 1.23 ATOM 608 CD1 TYR 38 4.653 7.176 -5.109 1.00 1.23 ATOM 610 CE1 TYR 38 5.940 7.601 -5.475 1.00 1.23 ATOM 612 CZ TYR 38 6.904 6.659 -5.872 1.00 1.23 ATOM 613 OH TYR 38 8.164 7.075 -6.164 1.00 1.23 ATOM 615 CE2 TYR 38 6.575 5.292 -5.946 1.00 1.23 ATOM 617 CD2 TYR 38 5.296 4.867 -5.574 1.00 1.23 ATOM 619 C TYR 38 1.526 3.761 -6.056 1.00 1.23 ATOM 620 O TYR 38 0.456 3.540 -5.496 1.00 1.23 ATOM 621 N THR 39 2.258 2.808 -6.629 1.00 1.40 ATOM 623 CA THR 39 1.900 1.389 -6.553 1.00 1.40 ATOM 625 CB THR 39 0.976 1.002 -7.722 1.00 1.40 ATOM 627 CG2 THR 39 1.629 1.093 -9.100 1.00 1.40 ATOM 631 OG1 THR 39 0.521 -0.320 -7.582 1.00 1.40 ATOM 633 C THR 39 3.133 0.494 -6.441 1.00 1.40 ATOM 634 O THR 39 4.172 0.784 -7.022 1.00 1.40 ATOM 635 N LEU 40 3.010 -0.598 -5.673 1.00 0.99 ATOM 637 CA LEU 40 3.982 -1.683 -5.598 1.00 0.99 ATOM 639 CB LEU 40 4.568 -1.828 -4.180 1.00 0.99 ATOM 642 CG LEU 40 5.552 -0.738 -3.742 1.00 0.99 ATOM 644 CD1 LEU 40 6.085 -1.075 -2.355 1.00 0.99 ATOM 648 CD2 LEU 40 6.772 -0.653 -4.651 1.00 0.99 ATOM 652 C LEU 40 3.354 -3.005 -6.038 1.00 0.99 ATOM 653 O LEU 40 2.197 -3.286 -5.722 1.00 0.99 ATOM 654 N CYS 41 4.160 -3.815 -6.718 1.00 1.18 ATOM 656 CA CYS 41 3.789 -5.102 -7.309 1.00 1.18 ATOM 658 CB CYS 41 3.694 -4.918 -8.842 1.00 1.18 ATOM 661 SG CYS 41 2.759 -3.474 -9.422 1.00 1.18 ATOM 662 C CYS 41 4.807 -6.198 -6.920 1.00 1.18 ATOM 663 O CYS 41 4.373 -7.238 -6.385 1.00 1.18 ATOM 664 OXT CYS 41 6.027 -6.004 -7.120 1.00 1.18 TER END