####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS047_2 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS047_2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 1 - 41 4.27 4.27 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 24 - 41 1.81 6.57 LCS_AVERAGE: 30.81 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 26 - 41 0.63 6.79 LCS_AVERAGE: 25.16 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 4 4 41 3 3 5 5 6 6 6 7 7 8 9 9 9 10 33 34 35 36 38 41 LCS_GDT Q 2 Q 2 4 4 41 3 3 5 5 6 6 6 7 7 8 9 31 33 36 38 40 40 40 40 41 LCS_GDT E 3 E 3 4 5 41 3 3 5 7 12 19 24 32 35 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT T 4 T 4 4 6 41 3 4 5 7 12 19 26 33 35 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT R 5 R 5 5 6 41 3 4 5 8 12 23 27 33 35 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT K 6 K 6 5 6 41 3 6 9 12 19 23 27 33 35 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT K 7 K 7 5 9 41 3 4 5 5 6 11 25 31 34 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT C 8 C 8 8 10 41 5 7 9 13 15 18 19 28 34 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT T 9 T 9 8 10 41 5 7 13 14 16 19 26 33 35 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT E 10 E 10 8 10 41 5 7 13 14 16 20 26 33 35 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT M 11 M 11 8 10 41 5 7 13 14 18 23 27 33 35 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT K 12 K 12 8 10 41 5 7 13 14 19 23 27 33 35 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT K 13 K 13 8 10 41 4 7 13 14 19 23 27 33 35 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT K 14 K 14 8 10 41 4 7 13 14 19 23 27 33 35 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT F 15 F 15 8 10 41 4 7 13 14 19 23 27 33 35 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT K 16 K 16 4 10 41 3 3 4 6 8 17 23 28 34 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT N 17 N 17 4 10 41 3 7 13 14 18 23 27 33 35 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT C 18 C 18 8 9 41 4 7 8 8 11 14 23 26 33 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT E 19 E 19 8 9 41 4 7 8 9 11 15 26 33 35 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT V 20 V 20 8 9 41 4 7 8 8 11 20 27 33 35 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT R 21 R 21 8 9 41 4 7 8 9 11 22 27 33 35 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT C 22 C 22 8 9 41 4 7 8 9 11 22 27 33 35 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT D 23 D 23 8 9 41 4 7 8 9 11 19 27 33 35 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT E 24 E 24 8 18 41 3 7 8 9 11 15 24 31 35 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT S 25 S 25 8 18 41 3 4 8 8 11 20 24 33 35 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT N 26 N 26 16 18 41 9 16 16 16 18 23 27 33 35 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT H 27 H 27 16 18 41 9 16 16 16 19 23 27 33 35 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT C 28 C 28 16 18 41 9 16 16 16 19 23 27 33 35 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT V 29 V 29 16 18 41 5 16 16 16 19 23 27 33 35 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT E 30 E 30 16 18 41 6 16 16 16 19 23 27 33 35 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT V 31 V 31 16 18 41 9 16 16 16 19 23 27 33 35 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT R 32 R 32 16 18 41 3 16 16 16 19 23 27 33 35 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT C 33 C 33 16 18 41 9 16 16 16 19 23 27 33 35 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT S 34 S 34 16 18 41 4 16 16 16 19 23 27 33 35 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT D 35 D 35 16 18 41 9 16 16 16 18 23 27 33 35 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT T 36 T 36 16 18 41 9 16 16 16 19 23 27 33 35 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT K 37 K 37 16 18 41 4 16 16 16 19 23 27 33 35 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT Y 38 Y 38 16 18 41 4 16 16 16 19 23 27 33 35 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT T 39 T 39 16 18 41 9 16 16 16 19 23 27 33 35 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT L 40 L 40 16 18 41 9 16 16 16 19 23 27 33 35 38 39 39 39 39 39 40 40 40 40 41 LCS_GDT C 41 C 41 16 18 41 4 16 16 16 19 23 27 33 35 38 39 39 39 39 39 40 40 40 40 41 LCS_AVERAGE LCS_A: 51.99 ( 25.16 30.81 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 16 16 16 19 23 27 33 35 38 39 39 39 39 39 40 40 40 40 41 GDT PERCENT_AT 21.95 39.02 39.02 39.02 46.34 56.10 65.85 80.49 85.37 92.68 95.12 95.12 95.12 95.12 95.12 97.56 97.56 97.56 97.56 100.00 GDT RMS_LOCAL 0.35 0.63 0.63 0.63 1.98 2.14 2.49 2.99 3.13 3.30 3.37 3.37 3.37 3.37 3.37 3.75 3.75 3.75 3.75 4.27 GDT RMS_ALL_AT 6.54 6.79 6.79 6.79 4.83 4.78 4.68 4.48 4.44 4.41 4.39 4.39 4.39 4.39 4.39 4.30 4.30 4.30 4.30 4.27 # Checking swapping # possible swapping detected: E 3 E 3 # possible swapping detected: F 15 F 15 # possible swapping detected: D 23 D 23 # possible swapping detected: E 30 E 30 # possible swapping detected: D 35 D 35 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 15.224 0 0.622 0.654 19.876 0.000 0.000 19.876 LGA Q 2 Q 2 11.919 0 0.373 1.087 15.406 0.000 0.000 15.406 LGA E 3 E 3 4.986 0 0.485 1.252 7.447 15.909 8.889 4.896 LGA T 4 T 4 4.203 0 0.170 0.368 4.975 7.273 6.494 4.265 LGA R 5 R 5 2.696 0 0.207 1.126 7.095 36.818 17.025 7.095 LGA K 6 K 6 2.202 0 0.055 1.272 12.138 36.364 17.374 12.138 LGA K 7 K 7 4.137 0 0.561 0.938 9.568 13.636 6.061 9.568 LGA C 8 C 8 5.288 0 0.546 0.499 6.614 6.364 4.242 6.614 LGA T 9 T 9 4.115 0 0.119 0.151 5.105 9.091 5.714 5.105 LGA E 10 E 10 3.846 0 0.086 0.564 5.205 17.727 10.101 4.850 LGA M 11 M 11 2.327 0 0.030 0.949 3.024 38.636 31.818 2.909 LGA K 12 K 12 1.858 0 0.014 0.868 3.595 47.727 36.566 3.595 LGA K 13 K 13 1.646 0 0.051 0.994 6.463 51.364 29.091 6.463 LGA K 14 K 14 1.762 0 0.041 1.217 7.193 47.727 28.081 7.193 LGA F 15 F 15 1.365 0 0.313 0.241 5.429 49.091 28.099 5.429 LGA K 16 K 16 5.435 0 0.220 1.675 13.241 5.455 2.424 13.241 LGA N 17 N 17 1.963 0 0.635 1.192 6.391 46.364 24.773 5.520 LGA C 18 C 18 5.168 0 0.576 0.683 9.246 8.636 5.758 9.246 LGA E 19 E 19 4.104 0 0.194 0.724 5.998 5.909 3.838 5.601 LGA V 20 V 20 3.687 0 0.028 0.054 4.248 14.545 12.208 3.715 LGA R 21 R 21 3.338 0 0.179 1.390 10.841 14.545 6.942 10.469 LGA C 22 C 22 3.690 0 0.127 0.216 3.816 14.545 15.758 3.132 LGA D 23 D 23 4.853 0 0.143 0.948 6.096 0.909 2.955 3.267 LGA E 24 E 24 5.128 0 0.641 0.685 6.541 0.455 2.424 4.480 LGA S 25 S 25 4.898 0 0.599 0.971 8.332 3.636 2.424 8.332 LGA N 26 N 26 2.836 0 0.221 1.288 8.602 30.455 15.909 8.239 LGA H 27 H 27 2.392 0 0.100 1.135 4.957 38.636 32.727 2.420 LGA C 28 C 28 2.070 0 0.113 0.211 2.800 35.455 34.545 2.655 LGA V 29 V 29 2.832 0 0.038 1.059 5.742 35.455 29.091 5.742 LGA E 30 E 30 2.052 0 0.192 0.604 4.869 35.455 22.020 4.869 LGA V 31 V 31 2.787 0 0.103 0.143 4.070 32.727 24.675 4.070 LGA R 32 R 32 2.834 0 0.083 1.165 4.080 20.909 21.653 2.956 LGA C 33 C 33 2.964 0 0.427 0.847 3.336 25.000 26.061 2.402 LGA S 34 S 34 2.944 0 0.030 0.699 3.134 25.000 33.333 0.963 LGA D 35 D 35 3.228 0 0.176 0.450 3.790 20.455 19.545 2.762 LGA T 36 T 36 2.986 0 0.066 0.983 5.351 22.727 19.481 5.351 LGA K 37 K 37 2.341 0 0.050 1.279 3.367 27.727 27.071 3.295 LGA Y 38 Y 38 2.951 0 0.241 1.237 3.774 27.273 31.364 3.774 LGA T 39 T 39 1.663 0 0.049 0.121 2.128 47.727 47.273 2.128 LGA L 40 L 40 2.357 0 0.038 0.989 4.160 38.182 32.727 4.160 LGA C 41 C 41 2.288 0 0.156 0.766 4.195 35.455 31.948 4.195 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 4.266 4.086 5.027 24.180 18.500 10.377 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 33 2.99 64.024 57.982 1.068 LGA_LOCAL RMSD: 2.991 Number of atoms: 33 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 4.476 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 4.266 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.766367 * X + 0.639006 * Y + -0.065973 * Z + 4.169645 Y_new = 0.642108 * X + -0.758856 * Y + 0.108793 * Z + 32.713524 Z_new = 0.019455 * X + -0.125737 * Y + -0.991873 * Z + 37.227276 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.697403 -0.019456 -3.015498 [DEG: 39.9583 -1.1148 -172.7753 ] ZXZ: -2.596471 3.014014 2.988083 [DEG: -148.7668 172.6903 171.2045 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS047_2 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS047_2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 33 2.99 57.982 4.27 REMARK ---------------------------------------------------------- MOLECULE T0955TS047_2 PFRMAT TS TARGET T0955 MODEL 2 REFINED PARENT 2AVT_A ATOM 1 N SER 1 8.520 -5.584 5.889 1.00 0.00 ATOM 2 CA SER 1 8.455 -4.226 5.347 1.00 0.00 ATOM 3 C SER 1 8.524 -4.131 3.764 1.00 0.00 ATOM 4 O SER 1 8.555 -3.043 3.183 1.00 0.00 ATOM 5 CB SER 1 9.738 -3.513 5.891 1.00 0.00 ATOM 6 OG SER 1 9.645 -2.751 7.053 1.00 0.00 ATOM 7 N GLN 2 8.806 -5.227 3.054 1.00 0.00 ATOM 8 CA GLN 2 8.946 -5.252 1.581 1.00 0.00 ATOM 9 C GLN 2 7.605 -5.490 0.785 1.00 0.00 ATOM 10 O GLN 2 7.209 -4.537 0.119 1.00 0.00 ATOM 11 CB GLN 2 9.935 -6.372 1.233 1.00 0.00 ATOM 12 CG GLN 2 10.257 -6.426 -0.248 1.00 0.00 ATOM 13 CD GLN 2 10.976 -7.690 -0.615 1.00 0.00 ATOM 14 OE1 GLN 2 10.378 -8.623 -1.138 1.00 0.00 ATOM 15 NE2 GLN 2 12.257 -7.751 -0.310 1.00 0.00 ATOM 16 N GLU 3 6.692 -6.397 1.196 1.00 0.00 ATOM 17 CA GLU 3 5.527 -6.719 0.369 1.00 0.00 ATOM 18 C GLU 3 4.144 -6.112 0.775 1.00 0.00 ATOM 19 O GLU 3 3.254 -6.839 1.266 1.00 0.00 ATOM 20 CB GLU 3 5.465 -8.232 0.318 1.00 0.00 ATOM 21 CG GLU 3 6.002 -9.062 -0.805 1.00 0.00 ATOM 22 CD GLU 3 5.062 -10.157 -1.278 1.00 0.00 ATOM 23 OE1 GLU 3 5.506 -11.254 -1.605 1.00 0.00 ATOM 24 OE2 GLU 3 3.844 -9.805 -1.275 1.00 0.00 ATOM 25 N THR 4 3.838 -5.171 -0.141 1.00 0.00 ATOM 26 CA THR 4 2.570 -4.412 -0.194 1.00 0.00 ATOM 27 C THR 4 1.895 -4.141 1.206 1.00 0.00 ATOM 28 O THR 4 2.045 -3.065 1.753 1.00 0.00 ATOM 29 CB THR 4 1.663 -4.774 -1.408 1.00 0.00 ATOM 30 OG1 THR 4 1.073 -3.568 -2.058 1.00 0.00 ATOM 31 CG2 THR 4 0.491 -5.796 -1.298 1.00 0.00 ATOM 32 N ARG 5 0.729 -4.751 1.339 1.00 0.00 ATOM 33 CA ARG 5 -0.191 -4.560 2.478 1.00 0.00 ATOM 34 C ARG 5 0.399 -5.026 3.861 1.00 0.00 ATOM 35 O ARG 5 0.806 -4.129 4.628 1.00 0.00 ATOM 36 CB ARG 5 -1.560 -5.210 2.127 1.00 0.00 ATOM 37 CG ARG 5 -2.612 -4.915 3.219 1.00 0.00 ATOM 38 CD ARG 5 -3.983 -5.534 2.849 1.00 0.00 ATOM 39 NE ARG 5 -5.030 -4.992 3.715 1.00 0.00 ATOM 40 CZ ARG 5 -5.643 -5.689 4.621 1.00 0.00 ATOM 41 NH1 ARG 5 -5.274 -6.916 4.854 1.00 0.00 ATOM 42 NH2 ARG 5 -6.479 -5.103 5.428 1.00 0.00 ATOM 43 N LYS 6 0.564 -6.351 4.129 1.00 0.00 ATOM 44 CA LYS 6 1.066 -6.914 5.415 1.00 0.00 ATOM 45 C LYS 6 2.599 -6.737 5.470 1.00 0.00 ATOM 46 O LYS 6 3.103 -6.475 6.578 1.00 0.00 ATOM 47 CB LYS 6 0.600 -8.378 5.577 1.00 0.00 ATOM 48 CG LYS 6 -0.880 -8.509 5.742 1.00 0.00 ATOM 49 CD LYS 6 -1.186 -10.023 5.731 1.00 0.00 ATOM 50 CE LYS 6 -2.682 -10.254 5.563 1.00 0.00 ATOM 51 NZ LYS 6 -3.072 -11.656 5.979 1.00 0.00 ATOM 52 N LYS 7 3.264 -7.253 4.420 1.00 0.00 ATOM 53 CA LYS 7 4.648 -7.032 4.360 1.00 0.00 ATOM 54 C LYS 7 4.687 -5.507 3.932 1.00 0.00 ATOM 55 O LYS 7 3.812 -4.706 4.375 1.00 0.00 ATOM 56 CB LYS 7 5.364 -7.992 3.441 1.00 0.00 ATOM 57 CG LYS 7 5.491 -9.407 3.932 1.00 0.00 ATOM 58 CD LYS 7 6.782 -10.046 3.357 1.00 0.00 ATOM 59 CE LYS 7 6.593 -11.546 3.310 1.00 0.00 ATOM 60 NZ LYS 7 7.677 -12.190 2.550 1.00 0.00 ATOM 61 N CYS 8 5.723 -5.024 3.365 1.00 0.00 ATOM 62 CA CYS 8 5.722 -3.628 2.874 1.00 0.00 ATOM 63 C CYS 8 5.497 -2.517 3.976 1.00 0.00 ATOM 64 O CYS 8 4.394 -1.899 4.036 1.00 0.00 ATOM 65 CB CYS 8 4.604 -3.495 1.907 1.00 0.00 ATOM 66 SG CYS 8 4.414 -1.859 1.154 1.00 0.00 ATOM 67 N THR 9 6.116 -2.763 5.077 1.00 0.00 ATOM 68 CA THR 9 6.060 -1.779 6.072 1.00 0.00 ATOM 69 C THR 9 6.928 -0.578 5.526 1.00 0.00 ATOM 70 O THR 9 6.704 0.508 5.991 1.00 0.00 ATOM 71 CB THR 9 6.527 -2.306 7.464 1.00 0.00 ATOM 72 OG1 THR 9 5.755 -3.335 8.004 1.00 0.00 ATOM 73 CG2 THR 9 6.614 -1.154 8.500 1.00 0.00 ATOM 74 N GLU 10 8.029 -0.827 4.759 1.00 0.00 ATOM 75 CA GLU 10 8.831 0.165 4.129 1.00 0.00 ATOM 76 C GLU 10 8.024 0.934 3.057 1.00 0.00 ATOM 77 O GLU 10 8.371 2.100 2.830 1.00 0.00 ATOM 78 CB GLU 10 10.056 -0.461 3.419 1.00 0.00 ATOM 79 CG GLU 10 11.111 -0.973 4.367 1.00 0.00 ATOM 80 CD GLU 10 12.292 -1.592 3.655 1.00 0.00 ATOM 81 OE1 GLU 10 12.826 -2.405 4.433 1.00 0.00 ATOM 82 OE2 GLU 10 12.636 -1.293 2.523 1.00 0.00 ATOM 83 N MET 11 7.071 0.320 2.309 1.00 0.00 ATOM 84 CA MET 11 6.364 1.127 1.285 1.00 0.00 ATOM 85 C MET 11 5.377 2.041 2.032 1.00 0.00 ATOM 86 O MET 11 5.120 3.118 1.484 1.00 0.00 ATOM 87 CB MET 11 5.863 0.293 0.158 1.00 0.00 ATOM 88 CG MET 11 6.749 -0.262 -0.853 1.00 0.00 ATOM 89 SD MET 11 7.685 0.912 -1.831 1.00 0.00 ATOM 90 CE MET 11 6.468 1.095 -3.114 1.00 0.00 ATOM 91 N LYS 12 4.562 1.546 2.996 1.00 0.00 ATOM 92 CA LYS 12 3.575 2.330 3.806 1.00 0.00 ATOM 93 C LYS 12 4.286 3.396 4.604 1.00 0.00 ATOM 94 O LYS 12 3.739 4.479 4.863 1.00 0.00 ATOM 95 CB LYS 12 2.941 1.327 4.742 1.00 0.00 ATOM 96 CG LYS 12 1.821 1.851 5.550 1.00 0.00 ATOM 97 CD LYS 12 1.698 1.127 6.873 1.00 0.00 ATOM 98 CE LYS 12 1.461 -0.359 6.742 1.00 0.00 ATOM 99 NZ LYS 12 0.884 -0.891 7.987 1.00 0.00 ATOM 100 N LYS 13 5.322 2.946 5.363 1.00 0.00 ATOM 101 CA LYS 13 6.178 3.870 6.116 1.00 0.00 ATOM 102 C LYS 13 6.684 4.984 5.113 1.00 0.00 ATOM 103 O LYS 13 6.800 6.153 5.543 1.00 0.00 ATOM 104 CB LYS 13 7.351 3.131 6.784 1.00 0.00 ATOM 105 CG LYS 13 8.531 3.908 7.368 1.00 0.00 ATOM 106 CD LYS 13 8.235 4.542 8.756 1.00 0.00 ATOM 107 CE LYS 13 7.704 3.551 9.836 1.00 0.00 ATOM 108 NZ LYS 13 7.873 4.003 11.250 1.00 0.00 ATOM 109 N LYS 14 6.861 4.643 3.816 1.00 0.00 ATOM 110 CA LYS 14 7.304 5.549 2.761 1.00 0.00 ATOM 111 C LYS 14 6.197 6.593 2.306 1.00 0.00 ATOM 112 O LYS 14 6.613 7.704 1.932 1.00 0.00 ATOM 113 CB LYS 14 7.829 4.819 1.502 1.00 0.00 ATOM 114 CG LYS 14 7.900 5.669 0.275 1.00 0.00 ATOM 115 CD LYS 14 9.005 5.139 -0.632 1.00 0.00 ATOM 116 CE LYS 14 8.654 4.691 -2.025 1.00 0.00 ATOM 117 NZ LYS 14 7.320 4.058 -2.171 1.00 0.00 ATOM 118 N PHE 15 4.896 6.341 2.459 1.00 0.00 ATOM 119 CA PHE 15 3.859 7.268 2.004 1.00 0.00 ATOM 120 C PHE 15 3.817 8.554 2.878 1.00 0.00 ATOM 121 O PHE 15 3.579 8.503 4.090 1.00 0.00 ATOM 122 CB PHE 15 2.564 6.557 2.167 1.00 0.00 ATOM 123 CG PHE 15 2.342 5.450 1.188 1.00 0.00 ATOM 124 CD1 PHE 15 2.314 5.711 -0.159 1.00 0.00 ATOM 125 CD2 PHE 15 2.171 4.183 1.686 1.00 0.00 ATOM 126 CE1 PHE 15 2.099 4.668 -1.024 1.00 0.00 ATOM 127 CE2 PHE 15 1.959 3.159 0.804 1.00 0.00 ATOM 128 CZ PHE 15 1.924 3.396 -0.545 1.00 0.00 ATOM 129 N LYS 16 3.948 9.703 2.187 1.00 0.00 ATOM 130 CA LYS 16 3.989 11.060 2.777 1.00 0.00 ATOM 131 C LYS 16 2.724 11.451 3.609 1.00 0.00 ATOM 132 O LYS 16 2.909 11.690 4.810 1.00 0.00 ATOM 133 CB LYS 16 4.298 12.121 1.723 1.00 0.00 ATOM 134 CG LYS 16 5.613 12.038 1.026 1.00 0.00 ATOM 135 CD LYS 16 5.456 11.002 -0.078 1.00 0.00 ATOM 136 CE LYS 16 6.775 10.634 -0.713 1.00 0.00 ATOM 137 NZ LYS 16 6.469 10.150 -2.096 1.00 0.00 ATOM 138 N ASN 17 1.539 11.508 3.028 1.00 0.00 ATOM 139 CA ASN 17 0.335 11.874 3.743 1.00 0.00 ATOM 140 C ASN 17 -0.219 10.681 4.510 1.00 0.00 ATOM 141 O ASN 17 -0.404 9.581 3.959 1.00 0.00 ATOM 142 CB ASN 17 -0.642 12.593 2.854 1.00 0.00 ATOM 143 CG ASN 17 -0.361 14.031 2.675 1.00 0.00 ATOM 144 OD1 ASN 17 0.213 14.418 1.660 1.00 0.00 ATOM 145 ND2 ASN 17 -0.704 14.891 3.615 1.00 0.00 ATOM 146 N CYS 18 -0.647 11.024 5.713 1.00 0.00 ATOM 147 CA CYS 18 -1.234 10.091 6.643 1.00 0.00 ATOM 148 C CYS 18 -2.381 9.261 6.021 1.00 0.00 ATOM 149 O CYS 18 -2.322 8.039 6.156 1.00 0.00 ATOM 150 CB CYS 18 -1.681 10.831 7.910 1.00 0.00 ATOM 151 SG CYS 18 -0.215 11.311 8.910 1.00 0.00 ATOM 152 N GLU 19 -3.342 9.834 5.294 1.00 0.00 ATOM 153 CA GLU 19 -4.453 9.060 4.749 1.00 0.00 ATOM 154 C GLU 19 -3.935 7.907 3.848 1.00 0.00 ATOM 155 O GLU 19 -3.128 8.124 2.920 1.00 0.00 ATOM 156 CB GLU 19 -5.362 10.019 3.986 1.00 0.00 ATOM 157 CG GLU 19 -4.978 10.625 2.643 1.00 0.00 ATOM 158 CD GLU 19 -5.994 11.681 2.188 1.00 0.00 ATOM 159 OE1 GLU 19 -7.149 11.324 1.923 1.00 0.00 ATOM 160 OE2 GLU 19 -5.632 12.858 2.106 1.00 0.00 ATOM 161 N VAL 20 -4.313 6.677 4.203 1.00 0.00 ATOM 162 CA VAL 20 -3.943 5.468 3.485 1.00 0.00 ATOM 163 C VAL 20 -5.206 4.769 2.937 1.00 0.00 ATOM 164 O VAL 20 -6.005 4.206 3.698 1.00 0.00 ATOM 165 CB VAL 20 -3.134 4.572 4.433 1.00 0.00 ATOM 166 CG1 VAL 20 -2.681 3.259 3.761 1.00 0.00 ATOM 167 CG2 VAL 20 -1.897 5.279 4.981 1.00 0.00 ATOM 168 N ARG 21 -5.312 4.686 1.610 1.00 0.00 ATOM 169 CA ARG 21 -6.394 4.035 0.907 1.00 0.00 ATOM 170 C ARG 21 -5.876 2.870 0.039 1.00 0.00 ATOM 171 O ARG 21 -5.474 3.025 -1.132 1.00 0.00 ATOM 172 CB ARG 21 -7.074 4.999 0.011 1.00 0.00 ATOM 173 CG ARG 21 -7.579 6.240 0.666 1.00 0.00 ATOM 174 CD ARG 21 -8.577 5.945 1.788 1.00 0.00 ATOM 175 NE ARG 21 -9.027 7.193 2.422 1.00 0.00 ATOM 176 CZ ARG 21 -8.821 7.554 3.695 1.00 0.00 ATOM 177 NH1 ARG 21 -8.160 6.802 4.577 1.00 0.00 ATOM 178 NH2 ARG 21 -9.288 8.727 4.087 1.00 0.00 ATOM 179 N CYS 22 -6.290 1.675 0.402 1.00 0.00 ATOM 180 CA CYS 22 -5.908 0.435 -0.253 1.00 0.00 ATOM 181 C CYS 22 -7.084 -0.097 -1.097 1.00 0.00 ATOM 182 O CYS 22 -8.173 -0.378 -0.571 1.00 0.00 ATOM 183 CB CYS 22 -5.489 -0.541 0.850 1.00 0.00 ATOM 184 SG CYS 22 -3.953 -0.105 1.724 1.00 0.00 ATOM 185 N ASP 23 -6.742 -0.497 -2.301 1.00 0.00 ATOM 186 CA ASP 23 -7.660 -1.024 -3.312 1.00 0.00 ATOM 187 C ASP 23 -7.003 -2.291 -3.938 1.00 0.00 ATOM 188 O ASP 23 -5.808 -2.284 -4.123 1.00 0.00 ATOM 189 CB ASP 23 -7.922 0.032 -4.392 1.00 0.00 ATOM 190 CG ASP 23 -8.883 -0.292 -5.541 1.00 0.00 ATOM 191 OD1 ASP 23 -8.701 -1.352 -6.115 1.00 0.00 ATOM 192 OD2 ASP 23 -9.775 0.525 -5.803 1.00 0.00 ATOM 193 N GLU 24 -7.700 -3.429 -4.095 1.00 0.00 ATOM 194 CA GLU 24 -7.046 -4.620 -4.664 1.00 0.00 ATOM 195 C GLU 24 -7.583 -5.006 -6.050 1.00 0.00 ATOM 196 O GLU 24 -8.812 -4.976 -6.275 1.00 0.00 ATOM 197 CB GLU 24 -7.298 -5.756 -3.670 1.00 0.00 ATOM 198 CG GLU 24 -7.044 -7.184 -4.189 1.00 0.00 ATOM 199 CD GLU 24 -7.258 -8.236 -3.122 1.00 0.00 ATOM 200 OE1 GLU 24 -6.541 -8.515 -2.189 1.00 0.00 ATOM 201 OE2 GLU 24 -8.164 -9.003 -3.425 1.00 0.00 ATOM 202 N SER 25 -6.717 -5.395 -6.983 1.00 0.00 ATOM 203 CA SER 25 -7.082 -5.779 -8.341 1.00 0.00 ATOM 204 C SER 25 -5.989 -6.709 -8.938 1.00 0.00 ATOM 205 O SER 25 -4.877 -6.248 -9.241 1.00 0.00 ATOM 206 CB SER 25 -7.296 -4.534 -9.213 1.00 0.00 ATOM 207 OG SER 25 -6.135 -3.762 -9.543 1.00 0.00 ATOM 208 N ASN 26 -6.449 -7.825 -9.508 1.00 0.00 ATOM 209 CA ASN 26 -5.589 -8.853 -10.110 1.00 0.00 ATOM 210 C ASN 26 -4.450 -9.261 -9.112 1.00 0.00 ATOM 211 O ASN 26 -3.426 -9.777 -9.635 1.00 0.00 ATOM 212 CB ASN 26 -5.036 -8.363 -11.467 1.00 0.00 ATOM 213 CG ASN 26 -4.836 -9.554 -12.399 1.00 0.00 ATOM 214 OD1 ASN 26 -5.352 -10.666 -12.182 1.00 0.00 ATOM 215 ND2 ASN 26 -4.026 -9.289 -13.418 1.00 0.00 ATOM 216 N HIS 27 -4.711 -9.474 -7.804 1.00 0.00 ATOM 217 CA HIS 27 -3.661 -9.759 -6.815 1.00 0.00 ATOM 218 C HIS 27 -2.580 -8.611 -6.804 1.00 0.00 ATOM 219 O HIS 27 -1.521 -8.788 -6.210 1.00 0.00 ATOM 220 CB HIS 27 -2.965 -11.049 -7.162 1.00 0.00 ATOM 221 CG HIS 27 -3.887 -12.232 -7.129 1.00 0.00 ATOM 222 ND1 HIS 27 -4.536 -12.762 -8.157 1.00 0.00 ATOM 223 CD2 HIS 27 -4.234 -12.940 -6.004 1.00 0.00 ATOM 224 CE1 HIS 27 -5.263 -13.751 -7.733 1.00 0.00 ATOM 225 NE2 HIS 27 -5.071 -13.833 -6.463 1.00 0.00 ATOM 226 N CYS 28 -3.026 -7.370 -7.063 1.00 0.00 ATOM 227 CA CYS 28 -2.222 -6.170 -7.187 1.00 0.00 ATOM 228 C CYS 28 -2.981 -5.036 -6.409 1.00 0.00 ATOM 229 O CYS 28 -3.935 -4.464 -6.983 1.00 0.00 ATOM 230 CB CYS 28 -2.120 -6.071 -8.790 1.00 0.00 ATOM 231 SG CYS 28 -1.634 -7.657 -9.728 1.00 0.00 ATOM 232 N VAL 29 -2.457 -4.560 -5.288 1.00 0.00 ATOM 233 CA VAL 29 -3.196 -3.530 -4.527 1.00 0.00 ATOM 234 C VAL 29 -2.677 -2.142 -4.919 1.00 0.00 ATOM 235 O VAL 29 -1.488 -1.839 -4.805 1.00 0.00 ATOM 236 CB VAL 29 -3.178 -3.782 -3.001 1.00 0.00 ATOM 237 CG1 VAL 29 -3.993 -4.964 -2.630 1.00 0.00 ATOM 238 CG2 VAL 29 -1.693 -3.842 -2.581 1.00 0.00 ATOM 239 N GLU 30 -3.611 -1.211 -5.129 1.00 0.00 ATOM 240 CA GLU 30 -3.329 0.159 -5.461 1.00 0.00 ATOM 241 C GLU 30 -3.204 0.947 -4.132 1.00 0.00 ATOM 242 O GLU 30 -4.221 1.307 -3.522 1.00 0.00 ATOM 243 CB GLU 30 -4.508 0.656 -6.285 1.00 0.00 ATOM 244 CG GLU 30 -4.596 -0.016 -7.671 1.00 0.00 ATOM 245 CD GLU 30 -5.592 0.427 -8.687 1.00 0.00 ATOM 246 OE1 GLU 30 -6.747 0.766 -8.571 1.00 0.00 ATOM 247 OE2 GLU 30 -5.186 0.372 -9.872 1.00 0.00 ATOM 248 N VAL 31 -1.953 1.271 -3.765 1.00 0.00 ATOM 249 CA VAL 31 -1.776 1.951 -2.534 1.00 0.00 ATOM 250 C VAL 31 -1.938 3.486 -2.803 1.00 0.00 ATOM 251 O VAL 31 -1.133 4.094 -3.527 1.00 0.00 ATOM 252 CB VAL 31 -0.416 1.655 -1.843 1.00 0.00 ATOM 253 CG1 VAL 31 -0.408 2.046 -0.366 1.00 0.00 ATOM 254 CG2 VAL 31 -0.028 0.181 -1.981 1.00 0.00 ATOM 255 N ARG 32 -2.953 4.047 -2.124 1.00 0.00 ATOM 256 CA ARG 32 -3.271 5.462 -2.151 1.00 0.00 ATOM 257 C ARG 32 -2.673 6.276 -1.005 1.00 0.00 ATOM 258 O ARG 32 -3.059 6.140 0.158 1.00 0.00 ATOM 259 CB ARG 32 -4.777 5.787 -2.394 1.00 0.00 ATOM 260 CG ARG 32 -5.340 5.143 -3.640 1.00 0.00 ATOM 261 CD ARG 32 -6.658 5.772 -3.974 1.00 0.00 ATOM 262 NE ARG 32 -7.716 5.589 -2.978 1.00 0.00 ATOM 263 CZ ARG 32 -8.592 4.574 -2.977 1.00 0.00 ATOM 264 NH1 ARG 32 -8.474 3.600 -3.891 1.00 0.00 ATOM 265 NH2 ARG 32 -9.613 4.550 -2.085 1.00 0.00 ATOM 266 N CYS 33 -2.069 7.376 -1.459 1.00 0.00 ATOM 267 CA CYS 33 -1.401 8.374 -0.657 1.00 0.00 ATOM 268 C CYS 33 -1.827 9.796 -1.176 1.00 0.00 ATOM 269 O CYS 33 -2.773 9.893 -1.989 1.00 0.00 ATOM 270 CB CYS 33 0.124 8.319 -0.735 1.00 0.00 ATOM 271 SG CYS 33 0.965 9.620 0.261 1.00 0.00 ATOM 272 N SER 34 -1.351 10.898 -0.589 1.00 0.00 ATOM 273 CA SER 34 -1.850 12.188 -1.073 1.00 0.00 ATOM 274 C SER 34 -1.615 12.330 -2.584 1.00 0.00 ATOM 275 O SER 34 -2.610 12.382 -3.301 1.00 0.00 ATOM 276 CB SER 34 -1.293 13.370 -0.317 1.00 0.00 ATOM 277 OG SER 34 -1.135 14.651 -0.856 1.00 0.00 ATOM 278 N ASP 35 -0.352 12.350 -3.107 1.00 0.00 ATOM 279 CA ASP 35 -0.091 12.421 -4.571 1.00 0.00 ATOM 280 C ASP 35 0.736 11.231 -5.152 1.00 0.00 ATOM 281 O ASP 35 0.978 11.266 -6.384 1.00 0.00 ATOM 282 CB ASP 35 0.652 13.726 -4.825 1.00 0.00 ATOM 283 CG ASP 35 1.994 13.957 -4.242 1.00 0.00 ATOM 284 OD1 ASP 35 2.894 14.584 -4.841 1.00 0.00 ATOM 285 OD2 ASP 35 2.231 13.508 -3.085 1.00 0.00 ATOM 286 N THR 36 0.982 10.128 -4.421 1.00 0.00 ATOM 287 CA THR 36 1.770 9.048 -4.939 1.00 0.00 ATOM 288 C THR 36 0.963 7.720 -4.915 1.00 0.00 ATOM 289 O THR 36 0.727 7.153 -3.839 1.00 0.00 ATOM 290 CB THR 36 3.117 9.070 -4.130 1.00 0.00 ATOM 291 OG1 THR 36 2.895 8.767 -2.710 1.00 0.00 ATOM 292 CG2 THR 36 3.938 10.409 -4.257 1.00 0.00 ATOM 293 N LYS 37 0.879 7.129 -6.104 1.00 0.00 ATOM 294 CA LYS 37 0.174 5.876 -6.375 1.00 0.00 ATOM 295 C LYS 37 1.208 4.739 -6.602 1.00 0.00 ATOM 296 O LYS 37 1.958 4.737 -7.587 1.00 0.00 ATOM 297 CB LYS 37 -0.676 6.058 -7.637 1.00 0.00 ATOM 298 CG LYS 37 -1.266 4.704 -8.103 1.00 0.00 ATOM 299 CD LYS 37 -2.718 4.519 -7.711 1.00 0.00 ATOM 300 CE LYS 37 -3.365 3.316 -8.379 1.00 0.00 ATOM 301 NZ LYS 37 -4.835 3.365 -8.349 1.00 0.00 ATOM 302 N TYR 38 1.326 3.852 -5.623 1.00 0.00 ATOM 303 CA TYR 38 2.221 2.712 -5.711 1.00 0.00 ATOM 304 C TYR 38 1.403 1.404 -5.611 1.00 0.00 ATOM 305 O TYR 38 1.090 0.959 -4.514 1.00 0.00 ATOM 306 CB TYR 38 3.365 2.755 -4.677 1.00 0.00 ATOM 307 CG TYR 38 4.227 3.988 -4.801 1.00 0.00 ATOM 308 CD1 TYR 38 3.755 5.195 -4.263 1.00 0.00 ATOM 309 CD2 TYR 38 5.432 3.857 -5.469 1.00 0.00 ATOM 310 CE1 TYR 38 4.596 6.347 -4.393 1.00 0.00 ATOM 311 CE2 TYR 38 6.233 4.984 -5.552 1.00 0.00 ATOM 312 CZ TYR 38 5.798 6.175 -5.047 1.00 0.00 ATOM 313 OH TYR 38 6.661 7.274 -5.203 1.00 0.00 ATOM 314 N THR 39 1.326 0.683 -6.718 1.00 0.00 ATOM 315 CA THR 39 0.640 -0.618 -6.765 1.00 0.00 ATOM 316 C THR 39 1.676 -1.739 -6.456 1.00 0.00 ATOM 317 O THR 39 2.616 -1.903 -7.236 1.00 0.00 ATOM 318 CB THR 39 0.116 -0.841 -8.200 1.00 0.00 ATOM 319 OG1 THR 39 -0.505 0.292 -8.802 1.00 0.00 ATOM 320 CG2 THR 39 -0.730 -2.162 -8.331 1.00 0.00 ATOM 321 N LEU 40 1.247 -2.703 -5.667 1.00 0.00 ATOM 322 CA LEU 40 2.149 -3.768 -5.361 1.00 0.00 ATOM 323 C LEU 40 1.433 -5.150 -5.461 1.00 0.00 ATOM 324 O LEU 40 0.488 -5.482 -4.754 1.00 0.00 ATOM 325 CB LEU 40 2.881 -3.508 -4.084 1.00 0.00 ATOM 326 CG LEU 40 3.623 -2.230 -3.883 1.00 0.00 ATOM 327 CD1 LEU 40 4.100 -2.237 -2.444 1.00 0.00 ATOM 328 CD2 LEU 40 4.682 -2.061 -4.962 1.00 0.00 ATOM 329 N CYS 41 2.019 -5.963 -6.331 1.00 0.00 ATOM 330 CA CYS 41 1.563 -7.299 -6.672 1.00 0.00 ATOM 331 C CYS 41 2.525 -8.364 -6.093 1.00 0.00 ATOM 332 O CYS 41 2.094 -9.313 -5.459 1.00 0.00 ATOM 333 CB CYS 41 1.457 -7.380 -8.189 1.00 0.00 ATOM 334 SG CYS 41 2.975 -7.015 -9.086 1.00 0.00 ATOM 335 OXT CYS 41 3.731 -8.249 -6.396 1.00 0.00 TER END