####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS004_4 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS004_4.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 1 - 20 4.08 13.54 LCS_AVERAGE: 43.01 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 4 - 16 1.95 16.42 LONGEST_CONTINUOUS_SEGMENT: 13 5 - 17 1.79 15.71 LCS_AVERAGE: 19.21 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 5 - 16 0.70 16.38 LCS_AVERAGE: 15.65 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 5 6 20 3 4 6 6 8 10 15 17 21 24 25 26 27 29 29 29 30 30 30 32 LCS_GDT Q 2 Q 2 5 6 20 4 4 5 6 10 13 16 18 21 24 25 26 27 29 29 29 30 30 30 32 LCS_GDT E 3 E 3 5 6 20 4 4 6 6 8 10 15 16 21 24 25 26 27 29 29 29 30 30 30 32 LCS_GDT T 4 T 4 5 13 20 4 4 5 6 6 6 9 14 19 24 25 26 27 29 29 29 30 30 30 32 LCS_GDT R 5 R 5 12 13 20 8 11 12 13 13 14 16 18 19 23 25 26 27 29 29 29 30 30 30 32 LCS_GDT K 6 K 6 12 13 20 8 11 12 13 13 14 16 18 21 24 25 26 27 29 29 29 30 30 30 32 LCS_GDT K 7 K 7 12 13 20 8 11 12 13 13 14 16 18 21 24 25 26 27 29 29 29 30 30 30 32 LCS_GDT C 8 C 8 12 13 20 8 11 12 13 13 14 16 18 21 24 25 26 27 29 29 29 30 30 30 32 LCS_GDT T 9 T 9 12 13 20 8 11 12 13 13 14 16 18 21 24 25 26 27 29 29 29 30 30 30 32 LCS_GDT E 10 E 10 12 13 20 8 11 12 13 13 14 16 18 21 24 25 26 27 29 29 29 30 30 30 32 LCS_GDT M 11 M 11 12 13 20 8 11 12 13 13 14 16 18 21 24 25 26 27 29 29 29 30 30 30 32 LCS_GDT K 12 K 12 12 13 20 8 11 12 13 13 14 16 18 21 24 25 26 27 29 29 29 30 30 30 32 LCS_GDT K 13 K 13 12 13 20 8 11 12 13 13 14 16 18 21 24 25 26 27 29 29 29 30 30 30 32 LCS_GDT K 14 K 14 12 13 20 8 11 12 13 13 14 16 18 21 24 25 26 27 29 29 29 30 30 30 32 LCS_GDT F 15 F 15 12 13 20 7 11 12 13 13 14 16 18 21 24 25 26 27 29 29 29 30 30 30 32 LCS_GDT K 16 K 16 12 13 20 4 7 12 13 13 14 16 18 21 24 25 26 27 29 29 29 30 30 30 32 LCS_GDT N 17 N 17 5 13 20 4 4 4 6 8 14 16 18 21 24 25 26 27 29 29 29 30 30 30 32 LCS_GDT C 18 C 18 5 6 20 4 4 6 6 8 13 16 18 21 24 25 26 27 29 29 29 30 30 30 32 LCS_GDT E 19 E 19 5 6 20 3 4 6 6 8 10 15 18 21 24 25 26 27 29 29 29 30 30 30 32 LCS_GDT V 20 V 20 3 4 20 3 3 5 6 6 7 7 9 11 13 15 16 22 26 27 29 30 30 30 32 LCS_GDT R 21 R 21 3 3 17 3 3 3 4 4 5 7 9 11 13 15 16 18 22 23 25 26 29 30 32 LCS_GDT C 22 C 22 3 3 17 1 3 3 3 3 5 7 9 10 13 15 16 18 22 23 25 26 26 27 27 LCS_GDT D 23 D 23 4 4 17 3 4 4 4 4 5 7 9 10 11 15 16 17 22 23 25 26 26 27 27 LCS_GDT E 24 E 24 4 4 17 3 4 4 4 4 5 7 9 10 11 15 16 17 22 23 25 26 26 27 27 LCS_GDT S 25 S 25 4 5 17 3 4 4 4 4 6 7 9 10 11 15 16 17 22 23 25 26 26 27 27 LCS_GDT N 26 N 26 4 5 17 3 4 4 4 4 7 8 10 11 13 15 16 18 22 23 25 26 26 27 27 LCS_GDT H 27 H 27 3 5 17 3 3 3 4 4 7 8 10 11 13 15 16 18 22 23 25 26 26 27 27 LCS_GDT C 28 C 28 3 7 17 3 3 4 5 6 9 9 10 11 13 15 16 18 22 23 25 26 26 27 27 LCS_GDT V 29 V 29 5 7 17 3 4 5 6 8 9 9 10 11 11 12 14 16 18 19 21 23 24 26 27 LCS_GDT E 30 E 30 5 7 17 3 4 5 6 8 9 9 10 11 12 15 16 18 22 23 25 26 26 27 27 LCS_GDT V 31 V 31 5 7 17 3 4 5 6 8 9 9 10 11 13 15 16 18 22 23 25 26 28 30 32 LCS_GDT R 32 R 32 5 7 17 3 4 5 6 8 9 11 13 18 21 25 26 27 29 29 29 30 30 30 32 LCS_GDT C 33 C 33 5 7 17 3 7 9 9 13 14 16 18 21 24 25 26 27 29 29 29 30 30 30 32 LCS_GDT S 34 S 34 4 7 17 3 3 5 6 8 9 9 16 19 20 25 26 27 29 29 29 30 30 30 32 LCS_GDT D 35 D 35 4 7 17 3 3 4 6 6 7 9 10 12 15 18 23 27 29 29 29 30 30 30 32 LCS_GDT T 36 T 36 4 5 15 3 3 5 6 6 7 8 10 12 18 21 23 27 29 29 29 30 30 30 32 LCS_GDT K 37 K 37 4 5 13 0 3 4 5 5 7 7 11 21 24 25 26 27 29 29 29 30 30 30 32 LCS_GDT Y 38 Y 38 3 3 10 1 3 11 13 13 14 16 18 21 24 25 26 27 29 29 29 30 30 30 32 LCS_GDT T 39 T 39 3 3 10 3 3 4 5 5 5 16 18 21 24 25 26 27 29 29 29 30 30 30 32 LCS_GDT L 40 L 40 3 3 10 3 3 3 3 8 10 15 18 21 24 25 26 27 29 29 29 30 30 30 32 LCS_GDT C 41 C 41 3 3 10 3 3 6 6 8 10 15 18 21 24 25 26 27 29 29 29 30 30 30 32 LCS_AVERAGE LCS_A: 25.96 ( 15.65 19.21 43.01 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 11 12 13 13 14 16 18 21 24 25 26 27 29 29 29 30 30 30 32 GDT PERCENT_AT 19.51 26.83 29.27 31.71 31.71 34.15 39.02 43.90 51.22 58.54 60.98 63.41 65.85 70.73 70.73 70.73 73.17 73.17 73.17 78.05 GDT RMS_LOCAL 0.17 0.43 0.70 0.93 0.93 1.53 2.08 2.59 3.26 3.55 3.66 3.78 3.91 4.20 4.20 4.20 4.52 4.52 4.52 5.50 GDT RMS_ALL_AT 16.74 16.65 16.38 16.17 16.17 15.68 15.27 14.58 13.30 13.51 13.62 13.77 13.59 13.74 13.74 13.74 13.52 13.52 13.52 12.95 # Checking swapping # possible swapping detected: E 3 E 3 # possible swapping detected: E 10 E 10 # possible swapping detected: F 15 F 15 # possible swapping detected: D 23 D 23 # possible swapping detected: D 35 D 35 # possible swapping detected: Y 38 Y 38 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 9.280 0 0.610 0.684 11.872 0.000 0.000 9.255 LGA Q 2 Q 2 4.488 0 0.198 1.105 10.766 4.091 1.818 9.467 LGA E 3 E 3 8.151 0 0.086 0.567 12.225 0.000 0.000 12.170 LGA T 4 T 4 7.107 0 0.198 1.022 8.704 0.000 0.000 8.656 LGA R 5 R 5 3.229 0 0.648 1.060 8.018 25.455 10.744 8.018 LGA K 6 K 6 2.435 0 0.018 0.640 3.998 45.455 27.879 3.847 LGA K 7 K 7 1.474 0 0.097 1.010 2.982 61.818 54.747 2.982 LGA C 8 C 8 1.682 0 0.028 0.830 5.090 58.182 45.152 5.090 LGA T 9 T 9 0.860 0 0.012 0.034 1.190 77.727 77.143 1.190 LGA E 10 E 10 0.778 0 0.022 0.712 2.681 77.727 63.434 1.948 LGA M 11 M 11 0.947 0 0.020 0.285 1.773 70.000 73.864 0.640 LGA K 12 K 12 2.221 0 0.073 0.617 2.954 38.636 49.091 1.976 LGA K 13 K 13 2.556 0 0.026 0.602 3.438 27.727 38.384 0.873 LGA K 14 K 14 2.780 0 0.051 0.590 4.032 25.455 24.040 4.032 LGA F 15 F 15 3.043 0 0.483 1.342 11.149 30.455 12.066 11.149 LGA K 16 K 16 1.840 0 0.124 0.980 7.451 60.909 30.303 7.451 LGA N 17 N 17 3.241 0 0.053 0.436 6.434 20.000 10.227 6.434 LGA C 18 C 18 3.997 0 0.564 1.068 6.539 9.545 17.273 2.041 LGA E 19 E 19 6.241 0 0.569 0.924 10.487 0.000 0.000 5.549 LGA V 20 V 20 11.875 0 0.596 0.601 14.781 0.000 0.000 14.598 LGA R 21 R 21 17.380 0 0.642 1.358 26.237 0.000 0.000 26.237 LGA C 22 C 22 20.437 0 0.634 0.654 22.708 0.000 0.000 18.695 LGA D 23 D 23 23.896 0 0.575 1.220 27.582 0.000 0.000 23.209 LGA E 24 E 24 30.716 0 0.237 1.112 34.727 0.000 0.000 31.928 LGA S 25 S 25 33.935 0 0.615 0.854 34.607 0.000 0.000 33.822 LGA N 26 N 26 34.905 0 0.199 1.116 36.164 0.000 0.000 32.513 LGA H 27 H 27 34.201 0 0.569 1.008 40.432 0.000 0.000 40.432 LGA C 28 C 28 29.890 0 0.575 0.503 32.789 0.000 0.000 32.789 LGA V 29 V 29 26.051 0 0.193 1.158 27.557 0.000 0.000 26.880 LGA E 30 E 30 19.453 0 0.288 1.034 22.175 0.000 0.000 17.440 LGA V 31 V 31 13.610 0 0.052 0.053 16.302 0.000 0.000 11.644 LGA R 32 R 32 7.326 0 0.544 0.951 14.742 0.455 0.165 14.639 LGA C 33 C 33 1.427 0 0.360 0.367 4.843 28.182 32.727 3.283 LGA S 34 S 34 5.217 0 0.154 0.652 7.417 4.545 3.030 7.307 LGA D 35 D 35 7.748 0 0.058 0.987 8.758 0.000 0.000 6.600 LGA T 36 T 36 7.073 0 0.613 0.803 7.495 0.000 0.000 7.495 LGA K 37 K 37 5.126 0 0.606 1.128 10.446 0.455 1.010 10.446 LGA Y 38 Y 38 2.500 0 0.603 1.361 11.991 38.636 15.758 11.991 LGA T 39 T 39 3.157 0 0.599 0.825 7.177 14.091 8.052 7.177 LGA L 40 L 40 5.849 0 0.602 1.320 10.095 1.818 0.909 8.449 LGA C 41 C 41 7.324 0 0.311 0.446 8.800 0.000 0.000 8.800 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 10.548 10.477 11.372 17.594 14.581 10.510 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 18 2.59 43.293 38.319 0.670 LGA_LOCAL RMSD: 2.585 Number of atoms: 18 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 14.582 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 10.548 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.171386 * X + -0.002992 * Y + -0.985199 * Z + 2.170815 Y_new = -0.978285 * X + 0.117786 * Y + -0.170541 * Z + 6.311982 Z_new = 0.116553 * X + 0.993035 * Y + 0.017259 * Z + 1.029544 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.397366 -0.116818 1.553418 [DEG: -80.0632 -6.6932 89.0043 ] ZXZ: -1.399392 1.553536 0.116836 [DEG: -80.1793 89.0111 6.6942 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS004_4 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS004_4.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 18 2.59 38.319 10.55 REMARK ---------------------------------------------------------- MOLECULE T0955TS004_4 PFRMAT TS TARGET T0955 MODEL 4 PARENT 3tgu_H ATOM 1009 N SER 1 -7.415 -9.414 4.446 1.00 0.39 N ATOM 1010 CA SER 1 -6.223 -10.295 4.535 1.00 0.39 C ATOM 1011 C SER 1 -5.022 -9.716 3.788 1.00 0.39 C ATOM 1012 O SER 1 -3.927 -9.691 4.336 1.00 0.39 O ATOM 1013 CB SER 1 -6.556 -11.683 3.986 1.00 0.39 C ATOM 1014 OG SER 1 -7.032 -11.602 2.651 1.00 0.39 O ATOM 1015 N GLN 2 -5.143 -9.278 2.540 1.00 0.98 N ATOM 1016 CA GLN 2 -3.962 -8.951 1.726 1.00 0.98 C ATOM 1017 C GLN 2 -3.139 -7.773 2.242 1.00 0.98 C ATOM 1018 O GLN 2 -1.922 -7.739 2.104 1.00 0.98 O ATOM 1019 CB GLN 2 -4.397 -8.691 0.285 1.00 0.98 C ATOM 1020 CG GLN 2 -5.007 -9.928 -0.359 1.00 0.98 C ATOM 1021 CD GLN 2 -5.463 -9.698 -1.775 1.00 0.98 C ATOM 1022 OE1 GLN 2 -4.767 -9.107 -2.592 1.00 0.98 O ATOM 1023 NE2 GLN 2 -6.636 -10.171 -2.086 1.00 0.98 N ATOM 1024 N GLU 3 -3.784 -6.867 2.957 1.00 1.23 N ATOM 1025 CA GLU 3 -3.119 -5.747 3.616 1.00 1.23 C ATOM 1026 C GLU 3 -2.087 -6.159 4.673 1.00 1.23 C ATOM 1027 O GLU 3 -1.256 -5.350 5.071 1.00 1.23 O ATOM 1028 CB GLU 3 -4.175 -4.818 4.241 1.00 1.23 C ATOM 1029 CG GLU 3 -4.957 -5.354 5.460 1.00 1.23 C ATOM 1030 CD GLU 3 -5.957 -6.472 5.151 1.00 1.23 C ATOM 1031 OE1 GLU 3 -6.357 -6.687 3.987 1.00 1.23 O ATOM 1032 OE2 GLU 3 -6.361 -7.181 6.094 1.00 1.23 O ATOM 1033 N THR 4 -2.103 -7.414 5.106 1.00 1.29 N ATOM 1034 CA THR 4 -1.151 -7.913 6.105 1.00 1.29 C ATOM 1035 C THR 4 0.202 -8.318 5.518 1.00 1.29 C ATOM 1036 O THR 4 1.140 -8.628 6.257 1.00 1.29 O ATOM 1037 CB THR 4 -1.691 -9.160 6.845 1.00 1.29 C ATOM 1038 OG1 THR 4 -1.879 -10.235 5.918 1.00 1.29 O ATOM 1039 CG2 THR 4 -3.034 -8.905 7.514 1.00 1.29 C ATOM 1040 N ARG 5 0.327 -8.317 4.195 1.00 0.55 N ATOM 1041 CA ARG 5 1.595 -8.668 3.541 1.00 0.55 C ATOM 1042 C ARG 5 2.634 -7.618 3.901 1.00 0.55 C ATOM 1043 O ARG 5 2.287 -6.441 3.997 1.00 0.55 O ATOM 1044 CB ARG 5 1.428 -8.669 2.019 1.00 0.55 C ATOM 1045 CG ARG 5 0.564 -9.793 1.472 1.00 0.55 C ATOM 1046 CD ARG 5 0.186 -9.510 0.027 1.00 0.55 C ATOM 1047 NE ARG 5 -0.686 -10.554 -0.523 1.00 0.55 N ATOM 1048 CZ ARG 5 -1.303 -10.523 -1.697 1.00 0.55 C ATOM 1049 NH1 ARG 5 -2.081 -11.510 -2.025 1.00 0.55 N ATOM 1050 NH2 ARG 5 -1.194 -9.527 -2.538 1.00 0.55 N ATOM 1051 N LYS 6 3.900 -7.997 4.016 1.00 0.88 N ATOM 1052 CA LYS 6 4.976 -7.030 4.287 1.00 0.88 C ATOM 1053 C LYS 6 4.990 -5.958 3.206 1.00 0.88 C ATOM 1054 O LYS 6 5.036 -4.775 3.522 1.00 0.88 O ATOM 1055 CB LYS 6 6.344 -7.725 4.338 1.00 0.88 C ATOM 1056 CG LYS 6 7.532 -6.794 4.574 1.00 0.88 C ATOM 1057 CD LYS 6 8.842 -7.533 4.353 1.00 0.88 C ATOM 1058 CE LYS 6 10.022 -6.589 4.514 1.00 0.88 C ATOM 1059 NZ LYS 6 11.316 -7.270 4.194 1.00 0.88 N ATOM 1060 N LYS 7 4.860 -6.364 1.948 1.00 1.08 N ATOM 1061 CA LYS 7 4.775 -5.427 0.821 1.00 1.08 C ATOM 1062 C LYS 7 3.692 -4.372 1.028 1.00 1.08 C ATOM 1063 O LYS 7 3.959 -3.182 0.925 1.00 1.08 O ATOM 1064 CB LYS 7 4.513 -6.229 -0.464 1.00 1.08 C ATOM 1065 CG LYS 7 4.308 -5.413 -1.743 1.00 1.08 C ATOM 1066 CD LYS 7 4.101 -6.359 -2.928 1.00 1.08 C ATOM 1067 CE LYS 7 3.777 -5.646 -4.246 1.00 1.08 C ATOM 1068 NZ LYS 7 2.405 -5.028 -4.262 1.00 1.08 N ATOM 1069 N CYS 8 2.480 -4.788 1.358 1.00 1.31 N ATOM 1070 CA CYS 8 1.395 -3.832 1.544 1.00 1.31 C ATOM 1071 C CYS 8 1.627 -2.978 2.784 1.00 1.31 C ATOM 1072 O CYS 8 1.441 -1.771 2.747 1.00 1.31 O ATOM 1073 CB CYS 8 0.068 -4.582 1.637 1.00 1.31 C ATOM 1074 SG CYS 8 -0.266 -5.514 0.121 1.00 1.31 S ATOM 1075 N THR 9 2.090 -3.585 3.867 1.00 0.84 N ATOM 1076 CA THR 9 2.347 -2.863 5.113 1.00 0.84 C ATOM 1077 C THR 9 3.401 -1.770 4.939 1.00 0.84 C ATOM 1078 O THR 9 3.235 -0.648 5.409 1.00 0.84 O ATOM 1079 CB THR 9 2.821 -3.846 6.210 1.00 0.84 C ATOM 1080 OG1 THR 9 1.901 -4.938 6.299 1.00 0.84 O ATOM 1081 CG2 THR 9 2.863 -3.201 7.578 1.00 0.84 C ATOM 1082 N GLU 10 4.482 -2.062 4.232 1.00 0.79 N ATOM 1083 CA GLU 10 5.531 -1.068 4.014 1.00 0.79 C ATOM 1084 C GLU 10 5.039 0.097 3.162 1.00 0.79 C ATOM 1085 O GLU 10 5.368 1.255 3.433 1.00 0.79 O ATOM 1086 CB GLU 10 6.731 -1.706 3.324 1.00 0.79 C ATOM 1087 CG GLU 10 7.549 -2.604 4.235 1.00 0.79 C ATOM 1088 CD GLU 10 8.770 -3.179 3.543 1.00 0.79 C ATOM 1089 OE1 GLU 10 8.696 -3.555 2.354 1.00 0.79 O ATOM 1090 OE2 GLU 10 9.834 -3.281 4.192 1.00 0.79 O ATOM 1091 N MET 11 4.226 -0.186 2.155 1.00 0.65 N ATOM 1092 CA MET 11 3.695 0.890 1.322 1.00 0.65 C ATOM 1093 C MET 11 2.616 1.667 2.062 1.00 0.65 C ATOM 1094 O MET 11 2.462 2.859 1.849 1.00 0.65 O ATOM 1095 CB MET 11 3.124 0.361 0.008 1.00 0.65 C ATOM 1096 CG MET 11 4.131 -0.386 -0.847 1.00 0.65 C ATOM 1097 SD MET 11 5.611 0.530 -1.305 1.00 0.65 S ATOM 1098 CE MET 11 6.907 -0.436 -0.468 1.00 0.65 C ATOM 1099 N LYS 12 1.899 1.020 2.972 1.00 0.37 N ATOM 1100 CA LYS 12 0.896 1.705 3.789 1.00 0.37 C ATOM 1101 C LYS 12 1.576 2.696 4.710 1.00 0.37 C ATOM 1102 O LYS 12 1.139 3.830 4.841 1.00 0.37 O ATOM 1103 CB LYS 12 0.085 0.698 4.607 1.00 0.37 C ATOM 1104 CG LYS 12 -1.108 1.309 5.309 1.00 0.37 C ATOM 1105 CD LYS 12 -1.881 0.241 6.049 1.00 0.37 C ATOM 1106 CE LYS 12 -3.106 0.846 6.704 1.00 0.37 C ATOM 1107 NZ LYS 12 -3.959 -0.212 7.318 1.00 0.37 N ATOM 1108 N LYS 13 2.697 2.290 5.289 1.00 0.00 N ATOM 1109 CA LYS 13 3.504 3.199 6.103 1.00 0.00 C ATOM 1110 C LYS 13 3.998 4.369 5.261 1.00 0.00 C ATOM 1111 O LYS 13 3.870 5.511 5.683 1.00 0.00 O ATOM 1112 CB LYS 13 4.674 2.436 6.717 1.00 0.00 C ATOM 1113 CG LYS 13 4.267 1.480 7.826 1.00 0.00 C ATOM 1114 CD LYS 13 5.401 0.518 8.148 1.00 0.00 C ATOM 1115 CE LYS 13 5.007 -0.380 9.303 1.00 0.00 C ATOM 1116 NZ LYS 13 6.034 -1.425 9.594 1.00 0.00 N ATOM 1117 N LYS 14 4.499 4.122 4.054 1.00 0.00 N ATOM 1118 CA LYS 14 4.918 5.224 3.173 1.00 0.00 C ATOM 1119 C LYS 14 3.758 6.142 2.816 1.00 0.00 C ATOM 1120 O LYS 14 3.903 7.357 2.843 1.00 0.00 O ATOM 1121 CB LYS 14 5.560 4.710 1.879 1.00 0.00 C ATOM 1122 CG LYS 14 6.954 4.145 2.082 1.00 0.00 C ATOM 1123 CD LYS 14 7.569 3.651 0.784 1.00 0.00 C ATOM 1124 CE LYS 14 8.969 3.120 1.060 1.00 0.00 C ATOM 1125 NZ LYS 14 9.610 2.471 -0.131 1.00 0.00 N ATOM 1126 N PHE 15 2.595 5.582 2.522 1.00 0.00 N ATOM 1127 CA PHE 15 1.422 6.394 2.230 1.00 0.00 C ATOM 1128 C PHE 15 1.016 7.226 3.433 1.00 0.00 C ATOM 1129 O PHE 15 0.809 8.423 3.292 1.00 0.00 O ATOM 1130 CB PHE 15 0.246 5.540 1.759 1.00 0.00 C ATOM 1131 CG PHE 15 -1.006 6.343 1.535 1.00 0.00 C ATOM 1132 CD1 PHE 15 -1.141 7.172 0.408 1.00 0.00 C ATOM 1133 CD2 PHE 15 -2.028 6.329 2.499 1.00 0.00 C ATOM 1134 CE1 PHE 15 -2.278 8.005 0.252 1.00 0.00 C ATOM 1135 CE2 PHE 15 -3.171 7.147 2.354 1.00 0.00 C ATOM 1136 CZ PHE 15 -3.297 7.991 1.230 1.00 0.00 C ATOM 1137 N LYS 16 0.951 6.644 4.622 1.00 0.00 N ATOM 1138 CA LYS 16 0.567 7.419 5.798 1.00 0.00 C ATOM 1139 C LYS 16 1.600 8.485 6.138 1.00 0.00 C ATOM 1140 O LYS 16 1.235 9.609 6.454 1.00 0.00 O ATOM 1141 CB LYS 16 0.306 6.500 7.001 1.00 0.00 C ATOM 1142 CG LYS 16 -0.286 7.212 8.227 1.00 0.00 C ATOM 1143 CD LYS 16 -1.685 7.769 7.960 1.00 0.00 C ATOM 1144 CE LYS 16 -2.175 8.657 9.082 1.00 0.00 C ATOM 1145 NZ LYS 16 -3.487 9.283 8.706 1.00 0.00 N ATOM 1146 N ASN 17 2.883 8.175 6.023 1.00 0.00 N ATOM 1147 CA ASN 17 3.915 9.175 6.298 1.00 0.00 C ATOM 1148 C ASN 17 3.829 10.318 5.292 1.00 0.00 C ATOM 1149 O ASN 17 4.042 11.478 5.638 1.00 0.00 O ATOM 1150 CB ASN 17 5.322 8.570 6.231 1.00 0.00 C ATOM 1151 CG ASN 17 5.592 7.579 7.332 1.00 0.00 C ATOM 1152 OD1 ASN 17 5.095 7.692 8.447 1.00 0.00 O ATOM 1153 ND2 ASN 17 6.397 6.601 7.039 1.00 0.00 N ATOM 1154 N CYS 18 3.505 10.004 4.046 1.00 0.06 N ATOM 1155 CA CYS 18 3.298 11.037 3.036 1.00 0.06 C ATOM 1156 C CYS 18 2.083 11.877 3.417 1.00 0.06 C ATOM 1157 O CYS 18 2.146 13.103 3.439 1.00 0.06 O ATOM 1158 CB CYS 18 3.093 10.382 1.665 1.00 0.06 C ATOM 1159 SG CYS 18 2.970 11.556 0.281 1.00 0.06 S ATOM 1160 N GLU 19 0.986 11.211 3.751 1.00 0.35 N ATOM 1161 CA GLU 19 -0.273 11.877 4.061 1.00 0.35 C ATOM 1162 C GLU 19 -0.146 12.845 5.229 1.00 0.35 C ATOM 1163 O GLU 19 -0.608 13.971 5.120 1.00 0.35 O ATOM 1164 CB GLU 19 -1.348 10.825 4.358 1.00 0.35 C ATOM 1165 CG GLU 19 -2.740 11.383 4.593 1.00 0.35 C ATOM 1166 CD GLU 19 -3.759 10.285 4.851 1.00 0.35 C ATOM 1167 OE1 GLU 19 -3.625 9.533 5.838 1.00 0.35 O ATOM 1168 OE2 GLU 19 -4.731 10.166 4.074 1.00 0.35 O ATOM 1169 N VAL 20 0.517 12.461 6.313 1.00 0.51 N ATOM 1170 CA VAL 20 0.653 13.354 7.469 1.00 0.51 C ATOM 1171 C VAL 20 1.432 14.602 7.072 1.00 0.51 C ATOM 1172 O VAL 20 1.049 15.720 7.399 1.00 0.51 O ATOM 1173 CB VAL 20 1.366 12.647 8.665 1.00 0.51 C ATOM 1174 CG1 VAL 20 1.628 13.605 9.839 1.00 0.51 C ATOM 1175 CG2 VAL 20 0.517 11.479 9.181 1.00 0.51 C ATOM 1176 N ARG 21 2.513 14.437 6.322 1.00 1.02 N ATOM 1177 CA ARG 21 3.345 15.589 5.972 1.00 1.02 C ATOM 1178 C ARG 21 2.651 16.545 5.014 1.00 1.02 C ATOM 1179 O ARG 21 2.917 17.738 5.050 1.00 1.02 O ATOM 1180 CB ARG 21 4.699 15.126 5.418 1.00 1.02 C ATOM 1181 CG ARG 21 5.540 14.337 6.432 1.00 1.02 C ATOM 1182 CD ARG 21 6.011 15.200 7.596 1.00 1.02 C ATOM 1183 NE ARG 21 6.601 14.390 8.670 1.00 1.02 N ATOM 1184 CZ ARG 21 7.005 14.842 9.849 1.00 1.02 C ATOM 1185 NH1 ARG 21 7.456 13.993 10.721 1.00 1.02 N ATOM 1186 NH2 ARG 21 6.940 16.094 10.210 1.00 1.02 N ATOM 1187 N CYS 22 1.731 16.045 4.204 1.00 1.11 N ATOM 1188 CA CYS 22 0.962 16.914 3.317 1.00 1.11 C ATOM 1189 C CYS 22 -0.232 17.557 4.026 1.00 1.11 C ATOM 1190 O CYS 22 -0.577 18.706 3.768 1.00 1.11 O ATOM 1191 CB CYS 22 0.472 16.104 2.123 1.00 1.11 C ATOM 1192 SG CYS 22 1.815 15.290 1.249 1.00 1.11 S ATOM 1193 N ASP 23 -0.850 16.818 4.935 1.00 1.29 N ATOM 1194 CA ASP 23 -2.000 17.295 5.705 1.00 1.29 C ATOM 1195 C ASP 23 -1.593 18.444 6.624 1.00 1.29 C ATOM 1196 O ASP 23 -2.303 19.438 6.785 1.00 1.29 O ATOM 1197 CB ASP 23 -2.518 16.127 6.550 1.00 1.29 C ATOM 1198 CG ASP 23 -3.774 16.456 7.319 1.00 1.29 C ATOM 1199 OD1 ASP 23 -4.715 17.047 6.760 1.00 1.29 O ATOM 1200 OD2 ASP 23 -3.860 16.056 8.500 1.00 1.29 O ATOM 1201 N GLU 24 -0.405 18.316 7.192 1.00 1.53 N ATOM 1202 CA GLU 24 0.164 19.312 8.098 1.00 1.53 C ATOM 1203 C GLU 24 0.987 20.370 7.355 1.00 1.53 C ATOM 1204 O GLU 24 1.804 21.082 7.952 1.00 1.53 O ATOM 1205 CB GLU 24 1.017 18.596 9.148 1.00 1.53 C ATOM 1206 CG GLU 24 0.200 17.650 10.025 1.00 1.53 C ATOM 1207 CD GLU 24 1.026 17.011 11.126 1.00 1.53 C ATOM 1208 OE1 GLU 24 2.274 16.996 11.068 1.00 1.53 O ATOM 1209 OE2 GLU 24 0.423 16.532 12.112 1.00 1.53 O ATOM 1210 N SER 25 0.770 20.488 6.053 1.00 1.46 N ATOM 1211 CA SER 25 1.417 21.498 5.216 1.00 1.46 C ATOM 1212 C SER 25 0.340 22.412 4.641 1.00 1.46 C ATOM 1213 O SER 25 -0.667 21.939 4.125 1.00 1.46 O ATOM 1214 CB SER 25 2.176 20.820 4.074 1.00 1.46 C ATOM 1215 OG SER 25 2.680 21.762 3.144 1.00 1.46 O ATOM 1216 N ASN 26 0.559 23.720 4.713 1.00 1.46 N ATOM 1217 CA ASN 26 -0.388 24.706 4.178 1.00 1.46 C ATOM 1218 C ASN 26 0.176 25.244 2.864 1.00 1.46 C ATOM 1219 O ASN 26 -0.211 26.308 2.372 1.00 1.46 O ATOM 1220 CB ASN 26 -0.582 25.873 5.157 1.00 1.46 C ATOM 1221 CG ASN 26 -1.246 25.467 6.448 1.00 1.46 C ATOM 1222 OD1 ASN 26 -1.924 24.453 6.543 1.00 1.46 O ATOM 1223 ND2 ASN 26 -1.054 26.263 7.464 1.00 1.46 N ATOM 1224 N HIS 27 1.173 24.551 2.335 1.00 0.65 N ATOM 1225 CA HIS 27 1.834 24.991 1.115 1.00 0.65 C ATOM 1226 C HIS 27 0.992 24.524 -0.065 1.00 0.65 C ATOM 1227 O HIS 27 0.284 23.515 0.020 1.00 0.65 O ATOM 1228 CB HIS 27 3.247 24.413 1.037 1.00 0.65 C ATOM 1229 CG HIS 27 4.095 24.748 2.224 1.00 0.65 C ATOM 1230 ND1 HIS 27 4.693 23.784 3.011 1.00 0.65 N ATOM 1231 CD2 HIS 27 4.431 25.957 2.749 1.00 0.65 C ATOM 1232 CE1 HIS 27 5.365 24.464 3.987 1.00 0.65 C ATOM 1233 NE2 HIS 27 5.233 25.805 3.849 1.00 0.65 N ATOM 1234 N CYS 28 1.061 25.254 -1.164 1.00 0.75 N ATOM 1235 CA CYS 28 0.278 24.940 -2.352 1.00 0.75 C ATOM 1236 C CYS 28 1.144 24.433 -3.493 1.00 0.75 C ATOM 1237 O CYS 28 0.659 24.187 -4.599 1.00 0.75 O ATOM 1238 CB CYS 28 -0.507 26.173 -2.775 1.00 0.75 C ATOM 1239 SG CYS 28 -1.613 26.737 -1.469 1.00 0.75 S ATOM 1240 N VAL 29 2.428 24.265 -3.209 1.00 0.92 N ATOM 1241 CA VAL 29 3.345 23.643 -4.156 1.00 0.92 C ATOM 1242 C VAL 29 2.895 22.188 -4.295 1.00 0.92 C ATOM 1243 O VAL 29 2.261 21.648 -3.387 1.00 0.92 O ATOM 1244 CB VAL 29 4.826 23.798 -3.705 1.00 0.92 C ATOM 1245 CG1 VAL 29 5.187 25.285 -3.600 1.00 0.92 C ATOM 1246 CG2 VAL 29 5.114 23.118 -2.361 1.00 0.92 C ATOM 1247 N GLU 30 3.137 21.580 -5.447 1.00 1.30 N ATOM 1248 CA GLU 30 2.503 20.310 -5.810 1.00 1.30 C ATOM 1249 C GLU 30 3.000 19.073 -5.054 1.00 1.30 C ATOM 1250 O GLU 30 3.918 18.362 -5.488 1.00 1.30 O ATOM 1251 CB GLU 30 2.641 20.111 -7.321 1.00 1.30 C ATOM 1252 CG GLU 30 1.686 19.087 -7.897 1.00 1.30 C ATOM 1253 CD GLU 30 1.696 19.125 -9.411 1.00 1.30 C ATOM 1254 OE1 GLU 30 2.742 18.827 -10.022 1.00 1.30 O ATOM 1255 OE2 GLU 30 0.669 19.511 -10.015 1.00 1.30 O ATOM 1256 N VAL 31 2.396 18.825 -3.901 1.00 1.54 N ATOM 1257 CA VAL 31 2.740 17.685 -3.055 1.00 1.54 C ATOM 1258 C VAL 31 1.466 16.892 -2.783 1.00 1.54 C ATOM 1259 O VAL 31 0.450 17.421 -2.327 1.00 1.54 O ATOM 1260 CB VAL 31 3.449 18.133 -1.756 1.00 1.54 C ATOM 1261 CG1 VAL 31 3.957 16.928 -0.981 1.00 1.54 C ATOM 1262 CG2 VAL 31 4.647 19.043 -2.080 1.00 1.54 C ATOM 1263 N ARG 32 1.520 15.629 -3.180 1.00 1.51 N ATOM 1264 CA ARG 32 0.343 14.792 -3.410 1.00 1.51 C ATOM 1265 C ARG 32 0.757 13.345 -3.154 1.00 1.51 C ATOM 1266 O ARG 32 -0.439 13.110 -3.248 1.00 1.51 O ATOM 1267 CB ARG 32 -0.111 15.036 -4.865 1.00 1.51 C ATOM 1268 CG ARG 32 0.878 14.565 -5.926 1.00 1.51 C ATOM 1269 CD ARG 32 0.480 15.053 -7.302 1.00 1.51 C ATOM 1270 NE ARG 32 1.411 14.509 -8.296 1.00 1.51 N ATOM 1271 CZ ARG 32 1.504 14.849 -9.571 1.00 1.51 C ATOM 1272 NH1 ARG 32 2.391 14.226 -10.290 1.00 1.51 N ATOM 1273 NH2 ARG 32 0.782 15.780 -10.132 1.00 1.51 N ATOM 1274 N CYS 33 0.872 12.046 -2.970 1.00 1.40 N ATOM 1275 CA CYS 33 0.888 10.782 -2.236 1.00 1.40 C ATOM 1276 C CYS 33 0.173 9.782 -3.130 1.00 1.40 C ATOM 1277 O CYS 33 -0.002 8.622 -2.786 1.00 1.40 O ATOM 1278 CB CYS 33 0.213 10.887 -0.868 1.00 1.40 C ATOM 1279 SG CYS 33 1.014 12.101 0.225 1.00 1.40 S ATOM 1280 N SER 34 -0.160 10.239 -4.327 1.00 1.01 N ATOM 1281 CA SER 34 -0.734 9.402 -5.370 1.00 1.01 C ATOM 1282 C SER 34 0.232 8.276 -5.723 1.00 1.01 C ATOM 1283 O SER 34 -0.175 7.156 -5.998 1.00 1.01 O ATOM 1284 CB SER 34 -0.984 10.282 -6.592 1.00 1.01 C ATOM 1285 OG SER 34 0.182 11.024 -6.915 1.00 1.01 O ATOM 1286 N ASP 35 1.524 8.556 -5.656 1.00 0.94 N ATOM 1287 CA ASP 35 2.550 7.544 -5.907 1.00 0.94 C ATOM 1288 C ASP 35 2.595 6.458 -4.835 1.00 0.94 C ATOM 1289 O ASP 35 2.732 5.272 -5.131 1.00 0.94 O ATOM 1290 CB ASP 35 3.923 8.214 -5.951 1.00 0.94 C ATOM 1291 CG ASP 35 4.075 9.152 -7.127 1.00 0.94 C ATOM 1292 OD1 ASP 35 3.873 8.730 -8.286 1.00 0.94 O ATOM 1293 OD2 ASP 35 4.436 10.322 -6.906 1.00 0.94 O ATOM 1294 N THR 36 2.491 6.846 -3.571 1.00 0.73 N ATOM 1295 CA THR 36 2.583 5.876 -2.481 1.00 0.73 C ATOM 1296 C THR 36 1.275 5.099 -2.392 1.00 0.73 C ATOM 1297 O THR 36 1.266 3.900 -2.104 1.00 0.73 O ATOM 1298 CB THR 36 2.882 6.567 -1.134 1.00 0.73 C ATOM 1299 OG1 THR 36 2.003 7.676 -0.952 1.00 0.73 O ATOM 1300 CG2 THR 36 4.269 7.157 -1.091 1.00 0.73 C ATOM 1301 N LYS 37 0.170 5.762 -2.715 1.00 0.52 N ATOM 1302 CA LYS 37 -1.134 5.110 -2.799 1.00 0.52 C ATOM 1303 C LYS 37 -1.129 4.101 -3.935 1.00 0.52 C ATOM 1304 O LYS 37 -1.603 2.987 -3.767 1.00 0.52 O ATOM 1305 CB LYS 37 -2.226 6.158 -3.040 1.00 0.52 C ATOM 1306 CG LYS 37 -3.657 5.636 -3.034 1.00 0.52 C ATOM 1307 CD LYS 37 -4.155 5.174 -1.673 1.00 0.52 C ATOM 1308 CE LYS 37 -5.594 4.708 -1.832 1.00 0.52 C ATOM 1309 NZ LYS 37 -6.229 4.300 -0.540 1.00 0.52 N ATOM 1310 N TYR 38 -0.550 4.460 -5.072 1.00 0.54 N ATOM 1311 CA TYR 38 -0.483 3.546 -6.205 1.00 0.54 C ATOM 1312 C TYR 38 0.274 2.274 -5.865 1.00 0.54 C ATOM 1313 O TYR 38 -0.159 1.187 -6.222 1.00 0.54 O ATOM 1314 CB TYR 38 0.178 4.214 -7.410 1.00 0.54 C ATOM 1315 CG TYR 38 0.146 3.329 -8.631 1.00 0.54 C ATOM 1316 CD1 TYR 38 -1.018 3.245 -9.420 1.00 0.54 C ATOM 1317 CD2 TYR 38 1.261 2.538 -8.982 1.00 0.54 C ATOM 1318 CE1 TYR 38 -1.080 2.354 -10.517 1.00 0.54 C ATOM 1319 CE2 TYR 38 1.206 1.658 -10.095 1.00 0.54 C ATOM 1320 CZ TYR 38 0.031 1.575 -10.845 1.00 0.54 C ATOM 1321 OH TYR 38 -0.064 0.724 -11.909 1.00 0.54 O ATOM 1322 N THR 39 1.377 2.378 -5.138 1.00 1.16 N ATOM 1323 CA THR 39 2.109 1.180 -4.730 1.00 1.16 C ATOM 1324 C THR 39 1.444 0.402 -3.597 1.00 1.16 C ATOM 1325 O THR 39 1.752 -0.770 -3.388 1.00 1.16 O ATOM 1326 CB THR 39 3.547 1.533 -4.319 1.00 1.16 C ATOM 1327 OG1 THR 39 3.543 2.659 -3.435 1.00 1.16 O ATOM 1328 CG2 THR 39 4.379 1.919 -5.528 1.00 1.16 C ATOM 1329 N LEU 40 0.546 1.030 -2.851 1.00 1.20 N ATOM 1330 CA LEU 40 -0.231 0.328 -1.831 1.00 1.20 C ATOM 1331 C LEU 40 -1.321 -0.521 -2.488 1.00 1.20 C ATOM 1332 O LEU 40 -1.584 -1.650 -2.056 1.00 1.20 O ATOM 1333 CB LEU 40 -0.849 1.348 -0.864 1.00 1.20 C ATOM 1334 CG LEU 40 -1.758 0.846 0.267 1.00 1.20 C ATOM 1335 CD1 LEU 40 -1.121 -0.243 1.116 1.00 1.20 C ATOM 1336 CD2 LEU 40 -2.155 2.036 1.144 1.00 1.20 C ATOM 1337 N CYS 41 -1.946 0.024 -3.523 1.00 1.05 N ATOM 1338 CA CYS 41 -2.988 -0.678 -4.270 1.00 1.05 C ATOM 1339 C CYS 41 -2.438 -1.887 -5.022 1.00 1.05 C ATOM 1340 O CYS 41 -3.259 -2.759 -5.372 1.00 1.05 O ATOM 1341 OXT CYS 41 -1.232 -1.953 -5.319 1.00 1.05 O ATOM 1342 CB CYS 41 -3.627 0.283 -5.276 1.00 1.05 C ATOM 1343 SG CYS 41 -4.501 1.677 -4.518 1.00 1.05 S TER 1344 CYS A 41 END