####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 41 ( 335), selected 41 , name T0955TS004_3 # Molecule2: number of CA atoms 41 ( 665), selected 41 , name T0955.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS004_3.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 16 - 40 4.91 19.96 LONGEST_CONTINUOUS_SEGMENT: 25 17 - 41 4.74 20.12 LCS_AVERAGE: 56.51 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 1 - 17 1.74 19.56 LCS_AVERAGE: 29.57 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 2 - 16 0.66 20.36 LCS_AVERAGE: 22.61 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 41 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 1 S 1 3 17 20 3 3 5 12 16 16 17 18 20 21 21 22 22 23 23 24 24 26 26 26 LCS_GDT Q 2 Q 2 15 17 20 11 14 15 15 16 16 17 18 20 21 21 22 22 23 23 24 24 26 26 26 LCS_GDT E 3 E 3 15 17 20 12 14 15 15 16 16 17 18 20 21 21 22 22 23 23 24 24 26 26 26 LCS_GDT T 4 T 4 15 17 20 12 14 15 15 16 16 17 18 20 21 21 22 22 23 23 24 24 26 26 26 LCS_GDT R 5 R 5 15 17 20 12 14 15 15 16 16 17 18 20 21 21 22 22 23 23 24 24 26 26 26 LCS_GDT K 6 K 6 15 17 20 12 14 15 15 16 16 17 18 20 21 21 22 22 23 23 24 24 26 26 26 LCS_GDT K 7 K 7 15 17 20 12 14 15 15 16 16 17 18 20 21 21 22 22 23 23 24 24 26 26 26 LCS_GDT C 8 C 8 15 17 20 12 14 15 15 16 16 17 18 20 21 21 22 22 23 23 24 24 26 26 26 LCS_GDT T 9 T 9 15 17 20 12 14 15 15 16 16 17 18 20 21 21 22 22 23 23 24 24 26 26 26 LCS_GDT E 10 E 10 15 17 20 12 14 15 15 16 16 17 18 20 21 21 22 22 23 23 24 24 26 26 26 LCS_GDT M 11 M 11 15 17 20 12 14 15 15 16 16 17 18 20 21 21 22 22 23 23 24 24 26 26 26 LCS_GDT K 12 K 12 15 17 20 12 14 15 15 16 16 17 18 20 21 21 22 22 23 23 24 24 26 27 28 LCS_GDT K 13 K 13 15 17 20 12 14 15 15 16 16 17 18 20 21 21 22 22 23 23 24 25 26 27 28 LCS_GDT K 14 K 14 15 17 20 12 14 15 15 16 16 17 18 20 21 21 22 22 23 23 25 27 28 28 28 LCS_GDT F 15 F 15 15 17 20 7 14 15 15 16 16 17 18 20 21 21 22 23 24 26 27 27 28 28 28 LCS_GDT K 16 K 16 15 17 25 5 10 15 15 16 16 17 18 20 21 21 22 23 24 26 27 27 28 28 28 LCS_GDT N 17 N 17 5 17 25 5 5 6 8 10 14 17 18 20 21 21 23 23 25 26 27 27 28 28 28 LCS_GDT C 18 C 18 7 10 25 5 5 7 8 11 14 17 18 19 21 21 23 23 25 26 27 27 28 28 28 LCS_GDT E 19 E 19 7 10 25 5 5 7 8 9 10 12 13 17 18 21 23 23 25 26 27 27 28 28 28 LCS_GDT V 20 V 20 7 10 25 3 5 7 8 9 10 12 13 17 18 21 23 23 25 26 27 27 28 28 28 LCS_GDT R 21 R 21 7 10 25 4 5 7 8 9 10 12 13 17 18 21 23 23 25 26 27 27 28 28 28 LCS_GDT C 22 C 22 7 10 25 4 5 7 8 9 10 12 13 17 18 21 23 23 25 26 27 27 28 28 28 LCS_GDT D 23 D 23 7 10 25 4 5 7 8 9 10 12 13 17 18 21 23 23 25 26 27 27 28 28 28 LCS_GDT E 24 E 24 7 10 25 4 4 7 8 9 10 12 13 17 18 21 23 23 25 26 27 27 28 28 28 LCS_GDT S 25 S 25 6 10 25 3 4 6 7 8 9 12 13 17 18 21 23 23 25 26 27 27 28 28 28 LCS_GDT N 26 N 26 6 10 25 3 4 6 7 8 9 10 13 17 18 21 23 23 25 26 27 27 28 28 28 LCS_GDT H 27 H 27 4 10 25 3 3 4 7 8 9 12 13 17 18 21 23 23 25 26 27 27 28 28 28 LCS_GDT C 28 C 28 7 9 25 5 6 7 7 8 8 12 13 17 18 21 23 23 25 26 27 27 28 28 28 LCS_GDT V 29 V 29 7 9 25 5 6 7 7 8 8 9 12 15 18 21 23 23 25 26 27 27 28 28 28 LCS_GDT E 30 E 30 7 9 25 5 6 7 7 8 8 12 13 17 18 21 23 23 25 26 27 27 28 28 28 LCS_GDT V 31 V 31 7 9 25 5 6 7 7 8 8 10 13 17 18 21 23 23 25 26 27 27 28 28 28 LCS_GDT R 32 R 32 7 9 25 5 6 7 7 8 8 12 13 17 18 21 23 23 25 26 27 27 28 28 28 LCS_GDT C 33 C 33 7 9 25 5 6 7 7 8 10 12 16 20 21 21 23 23 25 26 27 27 28 28 28 LCS_GDT S 34 S 34 7 9 25 3 6 7 7 8 8 10 17 20 21 21 23 23 25 26 27 27 28 28 28 LCS_GDT D 35 D 35 4 9 25 3 3 5 7 8 8 9 10 14 18 21 23 23 25 25 27 27 28 28 28 LCS_GDT T 36 T 36 4 6 25 3 4 6 8 9 10 11 13 14 18 21 23 23 25 26 27 27 28 28 28 LCS_GDT K 37 K 37 5 6 25 3 4 6 8 9 12 13 17 20 21 21 23 23 25 26 27 27 28 28 28 LCS_GDT Y 38 Y 38 5 6 25 3 4 6 8 9 10 11 13 14 15 21 23 23 25 26 27 27 28 28 28 LCS_GDT T 39 T 39 5 6 25 3 4 6 8 9 10 11 13 14 15 21 23 23 25 26 27 27 28 28 28 LCS_GDT L 40 L 40 5 6 25 3 4 6 8 9 10 11 13 14 14 16 18 23 25 26 27 27 28 28 28 LCS_GDT C 41 C 41 5 6 25 3 3 5 8 9 10 11 13 14 14 16 18 23 25 26 27 27 28 28 28 LCS_AVERAGE LCS_A: 36.23 ( 22.61 29.57 56.51 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 12 14 15 15 16 16 17 18 20 21 21 23 23 25 26 27 27 28 28 28 GDT PERCENT_AT 29.27 34.15 36.59 36.59 39.02 39.02 41.46 43.90 48.78 51.22 51.22 56.10 56.10 60.98 63.41 65.85 65.85 68.29 68.29 68.29 GDT RMS_LOCAL 0.29 0.44 0.66 0.66 1.16 1.16 2.06 2.11 2.86 3.05 3.05 4.45 4.45 4.74 5.17 5.25 5.25 5.62 5.62 5.62 GDT RMS_ALL_AT 20.76 20.64 20.36 20.36 19.98 19.98 19.34 19.33 18.46 18.31 18.31 20.52 20.52 20.12 19.23 19.41 19.41 18.94 18.94 18.94 # Checking swapping # possible swapping detected: E 10 E 10 # possible swapping detected: F 15 F 15 # possible swapping detected: D 23 D 23 # possible swapping detected: E 24 E 24 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA S 1 S 1 2.368 0 0.636 0.707 3.982 36.364 29.091 3.982 LGA Q 2 Q 2 2.028 0 0.219 0.942 3.400 55.000 43.636 2.155 LGA E 3 E 3 1.310 0 0.046 1.414 7.558 65.909 37.172 7.269 LGA T 4 T 4 1.398 0 0.021 1.179 4.148 65.455 54.805 4.148 LGA R 5 R 5 1.194 0 0.025 1.027 5.472 73.636 43.636 5.472 LGA K 6 K 6 0.768 0 0.029 0.740 2.875 81.818 64.848 2.606 LGA K 7 K 7 0.518 0 0.050 0.801 2.919 81.818 58.788 2.919 LGA C 8 C 8 0.990 0 0.018 0.772 3.933 77.727 64.545 3.933 LGA T 9 T 9 0.745 0 0.012 0.032 1.063 77.727 79.481 0.508 LGA E 10 E 10 0.727 0 0.009 0.621 1.892 77.727 66.263 1.861 LGA M 11 M 11 1.049 0 0.055 0.856 3.834 69.545 69.091 3.834 LGA K 12 K 12 1.835 0 0.022 0.597 4.126 47.727 39.394 4.066 LGA K 13 K 13 2.093 0 0.028 0.547 2.826 38.636 47.475 0.849 LGA K 14 K 14 2.466 0 0.058 0.624 4.486 32.727 27.273 4.486 LGA F 15 F 15 2.640 0 0.435 0.397 6.627 35.909 14.380 6.627 LGA K 16 K 16 1.062 0 0.103 0.945 4.525 55.000 34.141 4.311 LGA N 17 N 17 4.051 0 0.042 0.524 6.868 11.364 5.682 6.868 LGA C 18 C 18 4.771 0 0.032 0.071 6.082 3.182 8.485 2.624 LGA E 19 E 19 9.593 0 0.235 0.910 16.983 0.000 0.000 16.031 LGA V 20 V 20 13.290 0 0.032 0.037 15.499 0.000 0.000 15.416 LGA R 21 R 21 19.611 0 0.062 1.165 28.990 0.000 0.000 28.504 LGA C 22 C 22 24.770 0 0.072 0.110 26.798 0.000 0.000 22.495 LGA D 23 D 23 31.102 0 0.127 0.629 33.245 0.000 0.000 30.029 LGA E 24 E 24 36.942 0 0.642 1.100 40.472 0.000 0.000 35.661 LGA S 25 S 25 40.985 0 0.466 0.429 43.657 0.000 0.000 39.626 LGA N 26 N 26 41.024 0 0.315 1.196 42.372 0.000 0.000 40.180 LGA H 27 H 27 39.489 0 0.120 1.110 43.780 0.000 0.000 42.673 LGA C 28 C 28 38.209 0 0.627 0.538 41.809 0.000 0.000 41.809 LGA V 29 V 29 31.844 0 0.099 0.123 34.217 0.000 0.000 29.272 LGA E 30 E 30 25.707 0 0.065 1.055 28.054 0.000 0.000 27.081 LGA V 31 V 31 19.480 0 0.021 0.027 22.303 0.000 0.000 17.829 LGA R 32 R 32 13.861 0 0.205 1.233 22.931 0.000 0.000 22.931 LGA C 33 C 33 8.416 0 0.500 0.576 11.900 0.000 0.000 11.900 LGA S 34 S 34 8.571 0 0.514 0.956 9.760 0.000 0.000 8.936 LGA D 35 D 35 10.078 0 0.093 1.184 11.563 0.000 0.000 9.893 LGA T 36 T 36 12.794 0 0.564 0.794 14.964 0.000 0.000 14.964 LGA K 37 K 37 12.403 0 0.614 1.587 16.782 0.000 0.000 10.554 LGA Y 38 Y 38 18.382 0 0.071 1.156 19.343 0.000 0.000 17.082 LGA T 39 T 39 22.028 0 0.175 0.183 25.257 0.000 0.000 21.934 LGA L 40 L 40 25.182 0 0.602 0.950 27.846 0.000 0.000 19.672 LGA C 41 C 41 31.369 0 0.544 1.264 34.368 0.000 0.000 33.342 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 41 164 164 100.00 335 335 100.00 41 41 SUMMARY(RMSD_GDC): 13.191 13.057 13.601 24.080 19.224 9.490 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 41 41 4.0 18 2.11 45.122 41.249 0.815 LGA_LOCAL RMSD: 2.107 Number of atoms: 18 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 19.325 Number of assigned atoms: 41 Std_ASGN_ATOMS RMSD: 13.191 Standard rmsd on all 41 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.201643 * X + 0.852148 * Y + 0.482891 * Z + -1.049469 Y_new = -0.976952 * X + 0.139731 * Y + 0.161371 * Z + 9.015495 Z_new = 0.070037 * X + -0.504301 * Y + 0.860683 * Z + 4.388168 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.367254 -0.070094 -0.530010 [DEG: -78.3379 -4.0161 -30.3673 ] ZXZ: 1.893305 0.534186 3.003596 [DEG: 108.4784 30.6066 172.0934 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0955TS004_3 REMARK 2: T0955.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0955TS004_3.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 41 41 4.0 18 2.11 41.249 13.19 REMARK ---------------------------------------------------------- MOLECULE T0955TS004_3 PFRMAT TS TARGET T0955 MODEL 3 PARENT 3f42_A ATOM 673 N SER 1 -0.993 -14.557 -0.771 1.00 0.13 N ATOM 674 CA SER 1 -1.674 -13.425 -0.091 1.00 0.13 C ATOM 675 C SER 1 -0.767 -12.751 0.934 1.00 0.13 C ATOM 676 O SER 1 -0.807 -11.535 1.063 1.00 0.13 O ATOM 677 CB SER 1 -2.937 -13.924 0.597 1.00 0.13 C ATOM 678 OG SER 1 -2.612 -14.932 1.535 1.00 0.13 O ATOM 679 N GLN 2 0.031 -13.471 1.713 1.00 0.19 N ATOM 680 CA GLN 2 0.733 -12.842 2.831 1.00 0.19 C ATOM 681 C GLN 2 1.829 -11.868 2.390 1.00 0.19 C ATOM 682 O GLN 2 2.028 -10.829 3.015 1.00 0.19 O ATOM 683 CB GLN 2 1.285 -13.921 3.768 1.00 0.19 C ATOM 684 CG GLN 2 1.675 -13.405 5.152 1.00 0.19 C ATOM 685 CD GLN 2 0.507 -12.802 5.922 1.00 0.19 C ATOM 686 OE1 GLN 2 -0.615 -13.297 5.887 1.00 0.19 O ATOM 687 NE2 GLN 2 0.757 -11.727 6.615 1.00 0.19 N ATOM 688 N GLU 3 2.483 -12.135 1.268 1.00 0.33 N ATOM 689 CA GLU 3 3.437 -11.163 0.725 1.00 0.33 C ATOM 690 C GLU 3 2.694 -9.927 0.238 1.00 0.33 C ATOM 691 O GLU 3 3.160 -8.815 0.420 1.00 0.33 O ATOM 692 CB GLU 3 4.237 -11.748 -0.441 1.00 0.33 C ATOM 693 CG GLU 3 5.232 -12.826 -0.045 1.00 0.33 C ATOM 694 CD GLU 3 6.360 -12.298 0.832 1.00 0.33 C ATOM 695 OE1 GLU 3 7.081 -11.353 0.425 1.00 0.33 O ATOM 696 OE2 GLU 3 6.578 -12.867 1.927 1.00 0.33 O ATOM 697 N THR 4 1.507 -10.103 -0.325 1.00 0.10 N ATOM 698 CA THR 4 0.699 -8.968 -0.773 1.00 0.10 C ATOM 699 C THR 4 0.348 -8.089 0.424 1.00 0.10 C ATOM 700 O THR 4 0.463 -6.866 0.377 1.00 0.10 O ATOM 701 CB THR 4 -0.613 -9.445 -1.442 1.00 0.10 C ATOM 702 OG1 THR 4 -0.321 -10.457 -2.411 1.00 0.10 O ATOM 703 CG2 THR 4 -1.324 -8.323 -2.147 1.00 0.10 C ATOM 704 N ARG 5 -0.010 -8.710 1.540 1.00 0.00 N ATOM 705 CA ARG 5 -0.299 -7.966 2.770 1.00 0.00 C ATOM 706 C ARG 5 0.930 -7.277 3.332 1.00 0.00 C ATOM 707 O ARG 5 0.840 -6.154 3.811 1.00 0.00 O ATOM 708 CB ARG 5 -0.850 -8.904 3.839 1.00 0.00 C ATOM 709 CG ARG 5 -2.208 -9.478 3.499 1.00 0.00 C ATOM 710 CD ARG 5 -2.627 -10.497 4.532 1.00 0.00 C ATOM 711 NE ARG 5 -2.903 -9.882 5.834 1.00 0.00 N ATOM 712 CZ ARG 5 -3.315 -10.512 6.922 1.00 0.00 C ATOM 713 NH1 ARG 5 -3.602 -9.792 7.965 1.00 0.00 N ATOM 714 NH2 ARG 5 -3.447 -11.811 6.998 1.00 0.00 N ATOM 715 N LYS 6 2.083 -7.922 3.243 1.00 0.00 N ATOM 716 CA LYS 6 3.338 -7.320 3.697 1.00 0.00 C ATOM 717 C LYS 6 3.614 -6.068 2.882 1.00 0.00 C ATOM 718 O LYS 6 3.879 -5.007 3.437 1.00 0.00 O ATOM 719 CB LYS 6 4.473 -8.335 3.541 1.00 0.00 C ATOM 720 CG LYS 6 5.833 -7.869 4.010 1.00 0.00 C ATOM 721 CD LYS 6 6.808 -9.024 3.864 1.00 0.00 C ATOM 722 CE LYS 6 8.214 -8.645 4.276 1.00 0.00 C ATOM 723 NZ LYS 6 9.069 -9.876 4.229 1.00 0.00 N ATOM 724 N LYS 7 3.479 -6.177 1.570 1.00 0.00 N ATOM 725 CA LYS 7 3.682 -5.043 0.671 1.00 0.00 C ATOM 726 C LYS 7 2.680 -3.934 0.942 1.00 0.00 C ATOM 727 O LYS 7 3.059 -2.770 0.962 1.00 0.00 O ATOM 728 CB LYS 7 3.571 -5.527 -0.773 1.00 0.00 C ATOM 729 CG LYS 7 4.725 -6.434 -1.162 1.00 0.00 C ATOM 730 CD LYS 7 4.514 -7.059 -2.530 1.00 0.00 C ATOM 731 CE LYS 7 5.569 -8.117 -2.820 1.00 0.00 C ATOM 732 NZ LYS 7 6.955 -7.589 -2.636 1.00 0.00 N ATOM 733 N CYS 8 1.431 -4.278 1.218 1.00 0.00 N ATOM 734 CA CYS 8 0.445 -3.268 1.593 1.00 0.00 C ATOM 735 C CYS 8 0.840 -2.558 2.883 1.00 0.00 C ATOM 736 O CYS 8 0.782 -1.339 2.939 1.00 0.00 O ATOM 737 CB CYS 8 -0.947 -3.883 1.769 1.00 0.00 C ATOM 738 SG CYS 8 -1.676 -4.501 0.235 1.00 0.00 S ATOM 739 N THR 9 1.263 -3.281 3.909 1.00 0.00 N ATOM 740 CA THR 9 1.663 -2.645 5.164 1.00 0.00 C ATOM 741 C THR 9 2.890 -1.756 4.968 1.00 0.00 C ATOM 742 O THR 9 2.936 -0.634 5.462 1.00 0.00 O ATOM 743 CB THR 9 1.945 -3.718 6.239 1.00 0.00 C ATOM 744 OG1 THR 9 0.817 -4.594 6.302 1.00 0.00 O ATOM 745 CG2 THR 9 2.124 -3.123 7.621 1.00 0.00 C ATOM 746 N GLU 10 3.870 -2.207 4.197 1.00 0.00 N ATOM 747 CA GLU 10 5.052 -1.386 3.930 1.00 0.00 C ATOM 748 C GLU 10 4.692 -0.112 3.167 1.00 0.00 C ATOM 749 O GLU 10 5.183 0.973 3.492 1.00 0.00 O ATOM 750 CB GLU 10 6.097 -2.186 3.146 1.00 0.00 C ATOM 751 CG GLU 10 6.736 -3.301 3.973 1.00 0.00 C ATOM 752 CD GLU 10 7.810 -4.073 3.226 1.00 0.00 C ATOM 753 OE1 GLU 10 8.452 -3.492 2.322 1.00 0.00 O ATOM 754 OE2 GLU 10 8.102 -5.229 3.597 1.00 0.00 O ATOM 755 N MET 11 3.798 -0.210 2.192 1.00 0.09 N ATOM 756 CA MET 11 3.355 0.986 1.478 1.00 0.09 C ATOM 757 C MET 11 2.508 1.886 2.366 1.00 0.09 C ATOM 758 O MET 11 2.633 3.097 2.304 1.00 0.09 O ATOM 759 CB MET 11 2.565 0.637 0.218 1.00 0.09 C ATOM 760 CG MET 11 3.394 0.015 -0.899 1.00 0.09 C ATOM 761 SD MET 11 4.836 1.000 -1.384 1.00 0.09 S ATOM 762 CE MET 11 4.124 2.518 -2.046 1.00 0.09 C ATOM 763 N LYS 12 1.692 1.331 3.250 1.00 0.00 N ATOM 764 CA LYS 12 0.918 2.156 4.181 1.00 0.00 C ATOM 765 C LYS 12 1.803 2.909 5.161 1.00 0.00 C ATOM 766 O LYS 12 1.475 4.040 5.524 1.00 0.00 O ATOM 767 CB LYS 12 -0.087 1.305 4.949 1.00 0.00 C ATOM 768 CG LYS 12 -1.306 0.914 4.133 1.00 0.00 C ATOM 769 CD LYS 12 -2.171 -0.008 4.957 1.00 0.00 C ATOM 770 CE LYS 12 -3.442 -0.396 4.224 1.00 0.00 C ATOM 771 NZ LYS 12 -4.322 -1.192 5.135 1.00 0.00 N ATOM 772 N LYS 13 2.941 2.353 5.559 1.00 0.00 N ATOM 773 CA LYS 13 3.900 3.129 6.355 1.00 0.00 C ATOM 774 C LYS 13 4.399 4.316 5.546 1.00 0.00 C ATOM 775 O LYS 13 4.394 5.443 6.035 1.00 0.00 O ATOM 776 CB LYS 13 5.084 2.275 6.814 1.00 0.00 C ATOM 777 CG LYS 13 4.689 1.221 7.832 1.00 0.00 C ATOM 778 CD LYS 13 5.883 0.428 8.322 1.00 0.00 C ATOM 779 CE LYS 13 5.432 -0.658 9.291 1.00 0.00 C ATOM 780 NZ LYS 13 6.593 -1.422 9.841 1.00 0.00 N ATOM 781 N LYS 14 4.750 4.091 4.286 1.00 0.34 N ATOM 782 CA LYS 14 5.171 5.195 3.413 1.00 0.34 C ATOM 783 C LYS 14 4.065 6.229 3.253 1.00 0.34 C ATOM 784 O LYS 14 4.328 7.418 3.338 1.00 0.34 O ATOM 785 CB LYS 14 5.589 4.678 2.032 1.00 0.34 C ATOM 786 CG LYS 14 6.858 3.847 2.039 1.00 0.34 C ATOM 787 CD LYS 14 7.132 3.292 0.656 1.00 0.34 C ATOM 788 CE LYS 14 8.453 2.540 0.609 1.00 0.34 C ATOM 789 NZ LYS 14 8.724 1.988 -0.757 1.00 0.34 N ATOM 790 N PHE 15 2.828 5.799 3.067 1.00 0.59 N ATOM 791 CA PHE 15 1.720 6.733 2.891 1.00 0.59 C ATOM 792 C PHE 15 1.446 7.570 4.136 1.00 0.59 C ATOM 793 O PHE 15 1.105 8.745 4.035 1.00 0.59 O ATOM 794 CB PHE 15 0.432 5.992 2.511 1.00 0.59 C ATOM 795 CG PHE 15 0.522 5.184 1.241 1.00 0.59 C ATOM 796 CD1 PHE 15 1.318 5.585 0.144 1.00 0.59 C ATOM 797 CD2 PHE 15 -0.222 3.996 1.137 1.00 0.59 C ATOM 798 CE1 PHE 15 1.382 4.796 -1.030 1.00 0.59 C ATOM 799 CE2 PHE 15 -0.156 3.196 -0.024 1.00 0.59 C ATOM 800 CZ PHE 15 0.644 3.599 -1.114 1.00 0.59 C ATOM 801 N LYS 16 1.615 6.995 5.319 1.00 0.57 N ATOM 802 CA LYS 16 1.449 7.773 6.548 1.00 0.57 C ATOM 803 C LYS 16 2.586 8.778 6.682 1.00 0.57 C ATOM 804 O LYS 16 2.374 9.896 7.132 1.00 0.57 O ATOM 805 CB LYS 16 1.382 6.847 7.768 1.00 0.57 C ATOM 806 CG LYS 16 1.100 7.587 9.070 1.00 0.57 C ATOM 807 CD LYS 16 0.978 6.642 10.251 1.00 0.57 C ATOM 808 CE LYS 16 0.785 7.436 11.532 1.00 0.57 C ATOM 809 NZ LYS 16 0.851 6.562 12.743 1.00 0.57 N ATOM 810 N ASN 17 3.782 8.389 6.265 1.00 0.44 N ATOM 811 CA ASN 17 4.947 9.275 6.321 1.00 0.44 C ATOM 812 C ASN 17 4.875 10.436 5.323 1.00 0.44 C ATOM 813 O ASN 17 5.546 11.450 5.510 1.00 0.44 O ATOM 814 CB ASN 17 6.236 8.479 6.055 1.00 0.44 C ATOM 815 CG ASN 17 6.551 7.486 7.149 1.00 0.44 C ATOM 816 OD1 ASN 17 6.116 7.632 8.286 1.00 0.44 O ATOM 817 ND2 ASN 17 7.331 6.488 6.837 1.00 0.44 N ATOM 818 N CYS 18 4.108 10.294 4.252 1.00 0.90 N ATOM 819 CA CYS 18 3.975 11.356 3.252 1.00 0.90 C ATOM 820 C CYS 18 2.932 12.394 3.654 1.00 0.90 C ATOM 821 O CYS 18 1.954 12.067 4.316 1.00 0.90 O ATOM 822 CB CYS 18 3.559 10.760 1.907 1.00 0.90 C ATOM 823 SG CYS 18 4.793 9.642 1.220 1.00 0.90 S ATOM 824 N GLU 19 3.118 13.623 3.188 1.00 0.94 N ATOM 825 CA GLU 19 2.187 14.723 3.440 1.00 0.94 C ATOM 826 C GLU 19 1.936 15.502 2.145 1.00 0.94 C ATOM 827 O GLU 19 2.876 15.805 1.398 1.00 0.94 O ATOM 828 CB GLU 19 2.771 15.661 4.504 1.00 0.94 C ATOM 829 CG GLU 19 1.846 16.794 4.927 1.00 0.94 C ATOM 830 CD GLU 19 2.492 17.715 5.948 1.00 0.94 C ATOM 831 OE1 GLU 19 2.085 17.688 7.129 1.00 0.94 O ATOM 832 OE2 GLU 19 3.403 18.491 5.590 1.00 0.94 O ATOM 833 N VAL 20 0.680 15.836 1.888 1.00 0.89 N ATOM 834 CA VAL 20 0.279 16.632 0.729 1.00 0.89 C ATOM 835 C VAL 20 -0.467 17.859 1.231 1.00 0.89 C ATOM 836 O VAL 20 -1.521 17.740 1.870 1.00 0.89 O ATOM 837 CB VAL 20 -0.633 15.820 -0.231 1.00 0.89 C ATOM 838 CG1 VAL 20 -1.073 16.674 -1.430 1.00 0.89 C ATOM 839 CG2 VAL 20 0.094 14.560 -0.721 1.00 0.89 C ATOM 840 N ARG 21 0.088 19.033 0.966 1.00 0.55 N ATOM 841 CA ARG 21 -0.569 20.296 1.292 1.00 0.55 C ATOM 842 C ARG 21 -1.413 20.772 0.112 1.00 0.55 C ATOM 843 O ARG 21 -1.024 20.609 -1.046 1.00 0.55 O ATOM 844 CB ARG 21 0.470 21.353 1.678 1.00 0.55 C ATOM 845 CG ARG 21 -0.147 22.644 2.219 1.00 0.55 C ATOM 846 CD ARG 21 0.872 23.605 2.786 1.00 0.55 C ATOM 847 NE ARG 21 1.779 24.134 1.762 1.00 0.55 N ATOM 848 CZ ARG 21 2.717 25.046 1.957 1.00 0.55 C ATOM 849 NH1 ARG 21 3.573 25.284 1.008 1.00 0.55 N ATOM 850 NH2 ARG 21 2.805 25.763 3.041 1.00 0.55 N ATOM 851 N CYS 22 -2.550 21.375 0.413 1.00 1.07 N ATOM 852 CA CYS 22 -3.418 22.023 -0.558 1.00 1.07 C ATOM 853 C CYS 22 -3.709 23.417 -0.001 1.00 1.07 C ATOM 854 O CYS 22 -4.058 23.521 1.170 1.00 1.07 O ATOM 855 CB CYS 22 -4.716 21.226 -0.673 1.00 1.07 C ATOM 856 SG CYS 22 -4.476 19.490 -1.131 1.00 1.07 S ATOM 857 N ASP 23 -3.555 24.465 -0.798 1.00 1.48 N ATOM 858 CA ASP 23 -3.756 25.837 -0.324 1.00 1.48 C ATOM 859 C ASP 23 -4.944 26.448 -1.058 1.00 1.48 C ATOM 860 O ASP 23 -5.163 26.140 -2.233 1.00 1.48 O ATOM 861 CB ASP 23 -2.530 26.701 -0.620 1.00 1.48 C ATOM 862 CG ASP 23 -1.256 26.157 -0.009 1.00 1.48 C ATOM 863 OD1 ASP 23 -1.272 25.541 1.064 1.00 1.48 O ATOM 864 OD2 ASP 23 -0.194 26.317 -0.661 1.00 1.48 O ATOM 865 N GLU 24 -5.692 27.326 -0.407 1.00 1.96 N ATOM 866 CA GLU 24 -6.867 27.966 -1.002 1.00 1.96 C ATOM 867 C GLU 24 -7.098 29.323 -0.337 1.00 1.96 C ATOM 868 O GLU 24 -6.348 29.691 0.568 1.00 1.96 O ATOM 869 CB GLU 24 -8.090 27.049 -0.892 1.00 1.96 C ATOM 870 CG GLU 24 -8.539 26.682 0.508 1.00 1.96 C ATOM 871 CD GLU 24 -9.607 25.607 0.467 1.00 1.96 C ATOM 872 OE1 GLU 24 -9.305 24.451 0.090 1.00 1.96 O ATOM 873 OE2 GLU 24 -10.788 25.905 0.767 1.00 1.96 O ATOM 874 N SER 25 -8.074 30.080 -0.834 1.00 1.71 N ATOM 875 CA SER 25 -8.315 31.469 -0.416 1.00 1.71 C ATOM 876 C SER 25 -7.032 32.290 -0.511 1.00 1.71 C ATOM 877 O SER 25 -6.621 32.928 0.448 1.00 1.71 O ATOM 878 CB SER 25 -8.911 31.543 0.995 1.00 1.71 C ATOM 879 OG SER 25 -10.140 30.839 1.054 1.00 1.71 O ATOM 880 N ASN 26 -6.367 32.215 -1.659 1.00 1.50 N ATOM 881 CA ASN 26 -5.089 32.905 -1.907 1.00 1.50 C ATOM 882 C ASN 26 -4.036 32.598 -0.840 1.00 1.50 C ATOM 883 O ASN 26 -3.328 33.490 -0.371 1.00 1.50 O ATOM 884 CB ASN 26 -5.311 34.416 -2.055 1.00 1.50 C ATOM 885 CG ASN 26 -6.158 34.750 -3.243 1.00 1.50 C ATOM 886 OD1 ASN 26 -5.680 34.732 -4.375 1.00 1.50 O ATOM 887 ND2 ASN 26 -7.401 35.041 -3.024 1.00 1.50 N ATOM 888 N HIS 27 -3.977 31.326 -0.459 1.00 0.93 N ATOM 889 CA HIS 27 -3.074 30.766 0.556 1.00 0.93 C ATOM 890 C HIS 27 -3.380 31.217 1.985 1.00 0.93 C ATOM 891 O HIS 27 -2.599 30.952 2.896 1.00 0.93 O ATOM 892 CB HIS 27 -1.587 31.020 0.248 1.00 0.93 C ATOM 893 CG HIS 27 -1.201 30.771 -1.177 1.00 0.93 C ATOM 894 ND1 HIS 27 -1.103 31.751 -2.139 1.00 0.93 N ATOM 895 CD2 HIS 27 -0.802 29.630 -1.796 1.00 0.93 C ATOM 896 CE1 HIS 27 -0.694 31.181 -3.271 1.00 0.93 C ATOM 897 NE2 HIS 27 -0.501 29.884 -3.117 1.00 0.93 N ATOM 898 N CYS 28 -4.508 31.875 2.220 1.00 0.96 N ATOM 899 CA CYS 28 -4.884 32.238 3.586 1.00 0.96 C ATOM 900 C CYS 28 -5.342 30.989 4.338 1.00 0.96 C ATOM 901 O CYS 28 -5.330 30.950 5.566 1.00 0.96 O ATOM 902 CB CYS 28 -5.986 33.300 3.592 1.00 0.96 C ATOM 903 SG CYS 28 -5.528 34.812 2.708 1.00 0.96 S ATOM 904 N VAL 29 -5.706 29.951 3.598 1.00 0.99 N ATOM 905 CA VAL 29 -6.032 28.652 4.174 1.00 0.99 C ATOM 906 C VAL 29 -5.047 27.674 3.558 1.00 0.99 C ATOM 907 O VAL 29 -4.863 27.650 2.343 1.00 0.99 O ATOM 908 CB VAL 29 -7.499 28.244 3.867 1.00 0.99 C ATOM 909 CG1 VAL 29 -7.831 26.845 4.415 1.00 0.99 C ATOM 910 CG2 VAL 29 -8.476 29.262 4.461 1.00 0.99 C ATOM 911 N GLU 30 -4.417 26.871 4.398 1.00 1.13 N ATOM 912 CA GLU 30 -3.514 25.817 3.964 1.00 1.13 C ATOM 913 C GLU 30 -4.059 24.595 4.688 1.00 1.13 C ATOM 914 O GLU 30 -4.458 24.704 5.850 1.00 1.13 O ATOM 915 CB GLU 30 -2.079 26.086 4.420 1.00 1.13 C ATOM 916 CG GLU 30 -1.452 27.381 3.896 1.00 1.13 C ATOM 917 CD GLU 30 0.000 27.540 4.331 1.00 1.13 C ATOM 918 OE1 GLU 30 0.640 26.552 4.763 1.00 1.13 O ATOM 919 OE2 GLU 30 0.528 28.678 4.291 1.00 1.13 O ATOM 920 N VAL 31 -4.128 23.459 4.014 1.00 1.17 N ATOM 921 CA VAL 31 -4.651 22.219 4.586 1.00 1.17 C ATOM 922 C VAL 31 -3.610 21.163 4.277 1.00 1.17 C ATOM 923 O VAL 31 -3.130 21.115 3.151 1.00 1.17 O ATOM 924 CB VAL 31 -5.989 21.812 3.910 1.00 1.17 C ATOM 925 CG1 VAL 31 -6.543 20.503 4.507 1.00 1.17 C ATOM 926 CG2 VAL 31 -7.027 22.934 4.027 1.00 1.17 C ATOM 927 N ARG 32 -3.244 20.318 5.227 1.00 1.01 N ATOM 928 CA ARG 32 -2.240 19.281 5.000 1.00 1.01 C ATOM 929 C ARG 32 -2.864 17.952 5.345 1.00 1.01 C ATOM 930 O ARG 32 -3.436 17.816 6.417 1.00 1.01 O ATOM 931 CB ARG 32 -1.020 19.495 5.895 1.00 1.01 C ATOM 932 CG ARG 32 -0.394 20.869 5.775 1.00 1.01 C ATOM 933 CD ARG 32 0.935 20.893 6.489 1.00 1.01 C ATOM 934 NE ARG 32 1.471 22.252 6.634 1.00 1.01 N ATOM 935 CZ ARG 32 2.724 22.572 6.924 1.00 1.01 C ATOM 936 NH1 ARG 32 3.011 23.823 7.115 1.00 1.01 N ATOM 937 NH2 ARG 32 3.693 21.699 7.008 1.00 1.01 N ATOM 938 N CYS 33 -2.734 16.960 4.483 1.00 1.41 N ATOM 939 CA CYS 33 -3.213 15.621 4.800 1.00 1.41 C ATOM 940 C CYS 33 -2.085 14.633 4.576 1.00 1.41 C ATOM 941 O CYS 33 -1.183 14.879 3.781 1.00 1.41 O ATOM 942 CB CYS 33 -4.409 15.240 3.927 1.00 1.41 C ATOM 943 SG CYS 33 -5.832 16.350 4.078 1.00 1.41 S ATOM 944 N SER 34 -2.171 13.502 5.250 1.00 1.90 N ATOM 945 CA SER 34 -1.265 12.386 5.018 1.00 1.90 C ATOM 946 C SER 34 -1.739 11.690 3.740 1.00 1.90 C ATOM 947 O SER 34 -2.845 11.951 3.279 1.00 1.90 O ATOM 948 CB SER 34 -1.335 11.434 6.207 1.00 1.90 C ATOM 949 OG SER 34 -2.688 11.100 6.480 1.00 1.90 O ATOM 950 N ASP 35 -0.984 10.750 3.185 1.00 2.37 N ATOM 951 CA ASP 35 -1.483 9.989 2.028 1.00 2.37 C ATOM 952 C ASP 35 -2.328 8.793 2.504 1.00 2.37 C ATOM 953 O ASP 35 -3.032 8.141 1.741 1.00 2.37 O ATOM 954 CB ASP 35 -0.330 9.561 1.116 1.00 2.37 C ATOM 955 CG ASP 35 -0.804 9.020 -0.222 1.00 2.37 C ATOM 956 OD1 ASP 35 -1.908 9.365 -0.699 1.00 2.37 O ATOM 957 OD2 ASP 35 -0.040 8.247 -0.842 1.00 2.37 O ATOM 958 N THR 36 -2.393 8.601 3.816 1.00 2.28 N ATOM 959 CA THR 36 -3.452 7.790 4.432 1.00 2.28 C ATOM 960 C THR 36 -4.720 8.633 4.635 1.00 2.28 C ATOM 961 O THR 36 -5.726 8.162 5.181 1.00 2.28 O ATOM 962 CB THR 36 -3.004 7.183 5.776 1.00 2.28 C ATOM 963 OG1 THR 36 -2.404 8.194 6.584 1.00 2.28 O ATOM 964 CG2 THR 36 -1.966 6.104 5.574 1.00 2.28 C ATOM 965 N LYS 37 -4.665 9.857 4.118 1.00 1.44 N ATOM 966 CA LYS 37 -5.776 10.800 3.910 1.00 1.44 C ATOM 967 C LYS 37 -6.355 11.451 5.154 1.00 1.44 C ATOM 968 O LYS 37 -7.232 12.311 5.056 1.00 1.44 O ATOM 969 CB LYS 37 -6.880 10.206 3.020 1.00 1.44 C ATOM 970 CG LYS 37 -6.404 9.545 1.716 1.00 1.44 C ATOM 971 CD LYS 37 -5.627 10.484 0.789 1.00 1.44 C ATOM 972 CE LYS 37 -5.283 9.764 -0.502 1.00 1.44 C ATOM 973 NZ LYS 37 -4.535 10.642 -1.453 1.00 1.44 N ATOM 974 N TYR 38 -5.826 11.116 6.319 1.00 0.95 N ATOM 975 CA TYR 38 -6.170 11.843 7.537 1.00 0.95 C ATOM 976 C TYR 38 -5.622 13.257 7.401 1.00 0.95 C ATOM 977 O TYR 38 -4.467 13.427 7.000 1.00 0.95 O ATOM 978 CB TYR 38 -5.543 11.187 8.765 1.00 0.95 C ATOM 979 CG TYR 38 -6.097 9.810 9.046 1.00 0.95 C ATOM 980 CD1 TYR 38 -5.454 8.659 8.548 1.00 0.95 C ATOM 981 CD2 TYR 38 -7.273 9.651 9.808 1.00 0.95 C ATOM 982 CE1 TYR 38 -5.973 7.366 8.812 1.00 0.95 C ATOM 983 CE2 TYR 38 -7.800 8.356 10.068 1.00 0.95 C ATOM 984 CZ TYR 38 -7.141 7.230 9.569 1.00 0.95 C ATOM 985 OH TYR 38 -7.643 5.974 9.787 1.00 0.95 O ATOM 986 N THR 39 -6.432 14.247 7.744 1.00 0.74 N ATOM 987 CA THR 39 -5.986 15.637 7.809 1.00 0.74 C ATOM 988 C THR 39 -4.997 15.727 8.966 1.00 0.74 C ATOM 989 O THR 39 -5.176 15.061 9.989 1.00 0.74 O ATOM 990 CB THR 39 -7.187 16.587 8.054 1.00 0.74 C ATOM 991 OG1 THR 39 -8.161 16.378 7.029 1.00 0.74 O ATOM 992 CG2 THR 39 -6.811 18.050 7.995 1.00 0.74 C ATOM 993 N LEU 40 -3.942 16.506 8.793 1.00 0.93 N ATOM 994 CA LEU 40 -2.914 16.710 9.810 1.00 0.93 C ATOM 995 C LEU 40 -2.887 18.166 10.271 1.00 0.93 C ATOM 996 O LEU 40 -2.459 18.459 11.386 1.00 0.93 O ATOM 997 CB LEU 40 -1.541 16.336 9.238 1.00 0.93 C ATOM 998 CG LEU 40 -1.355 14.921 8.662 1.00 0.93 C ATOM 999 CD1 LEU 40 0.054 14.797 8.109 1.00 0.93 C ATOM 1000 CD2 LEU 40 -1.602 13.806 9.681 1.00 0.93 C ATOM 1001 N CYS 41 -3.319 19.079 9.408 1.00 0.87 N ATOM 1002 CA CYS 41 -3.386 20.506 9.704 1.00 0.87 C ATOM 1003 C CYS 41 -4.460 21.015 8.761 1.00 0.87 C ATOM 1004 O CYS 41 -4.535 20.388 7.689 1.00 0.87 O ATOM 1005 OXT CYS 41 -5.203 21.965 9.059 1.00 0.87 O ATOM 1006 CB CYS 41 -2.055 21.194 9.391 1.00 0.87 C ATOM 1007 SG CYS 41 -2.063 22.958 9.780 1.00 0.87 S TER 1008 CYS A 41 END