####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS498_5-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS498_5-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 5 - 24 4.91 13.41 LCS_AVERAGE: 40.13 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 9 - 17 1.53 19.09 LONGEST_CONTINUOUS_SEGMENT: 9 20 - 28 1.54 14.76 LCS_AVERAGE: 17.10 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 20 - 27 0.39 15.51 LCS_AVERAGE: 11.62 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 10 3 4 5 5 7 11 12 16 17 19 21 22 23 25 28 29 29 30 32 35 LCS_GDT V 3 V 3 4 6 10 3 4 4 5 6 11 12 16 17 19 21 22 23 25 28 29 29 30 33 35 LCS_GDT Q 4 Q 4 4 6 19 3 4 5 5 7 11 12 16 17 19 21 22 23 25 28 29 29 31 33 35 LCS_GDT G 5 G 5 4 6 20 3 4 5 5 7 11 12 16 17 19 21 22 23 25 28 29 30 31 33 35 LCS_GDT P 6 P 6 4 6 20 3 3 5 5 7 11 12 16 17 19 21 22 23 25 28 29 30 31 33 35 LCS_GDT W 7 W 7 4 6 20 3 3 4 5 7 7 12 16 17 19 21 22 23 25 28 29 30 31 33 35 LCS_GDT V 8 V 8 4 6 20 3 3 4 6 7 9 10 16 17 19 21 23 24 25 28 29 30 31 33 35 LCS_GDT G 9 G 9 6 9 20 3 6 6 8 9 9 10 12 15 19 21 23 24 25 28 29 30 31 33 35 LCS_GDT S 10 S 10 6 9 20 3 6 9 9 9 10 10 12 13 15 19 23 24 25 28 29 30 31 33 35 LCS_GDT S 11 S 11 6 9 20 4 6 6 8 9 9 10 12 15 16 19 23 24 25 28 28 30 31 33 35 LCS_GDT Y 12 Y 12 6 9 20 4 6 6 8 9 9 10 12 14 16 19 23 24 25 28 28 30 31 33 35 LCS_GDT V 13 V 13 6 9 20 4 6 6 8 9 9 10 12 15 16 19 23 24 25 28 29 30 31 33 35 LCS_GDT A 14 A 14 6 9 20 4 6 6 8 9 9 10 12 15 16 19 22 24 25 28 28 30 31 33 35 LCS_GDT E 15 E 15 5 9 20 3 5 5 8 9 9 10 12 15 16 17 19 22 23 28 28 28 30 31 33 LCS_GDT T 16 T 16 5 9 20 3 5 5 6 9 9 10 12 15 16 17 19 22 23 28 28 30 31 33 35 LCS_GDT G 17 G 17 5 9 20 3 5 6 8 9 9 10 12 15 16 19 23 24 25 28 29 30 31 33 35 LCS_GDT Q 18 Q 18 4 5 20 3 4 4 6 8 9 10 12 15 19 21 23 24 25 28 29 30 31 33 35 LCS_GDT N 19 N 19 4 5 20 3 4 4 4 7 11 12 16 17 19 21 23 24 25 28 29 30 31 33 35 LCS_GDT W 20 W 20 8 9 20 7 8 9 9 9 11 12 16 17 19 21 23 24 25 28 29 30 31 33 35 LCS_GDT A 21 A 21 8 9 20 7 8 9 9 9 10 12 16 17 19 21 23 24 25 28 29 30 31 33 35 LCS_GDT S 22 S 22 8 9 20 7 8 9 9 9 10 10 11 17 17 19 23 24 25 28 29 30 31 33 35 LCS_GDT L 23 L 23 8 9 20 7 8 9 9 9 10 10 16 17 19 21 23 24 25 28 29 30 31 33 35 LCS_GDT A 24 A 24 8 9 20 7 8 9 9 9 11 12 16 17 19 21 23 24 25 28 29 30 31 33 35 LCS_GDT A 25 A 25 8 9 18 7 8 9 9 9 10 11 15 17 19 21 22 23 25 28 29 30 31 33 35 LCS_GDT N 26 N 26 8 9 18 7 8 9 9 9 11 12 16 17 19 21 22 23 25 28 29 30 31 33 35 LCS_GDT E 27 E 27 8 9 18 6 8 9 9 9 10 10 11 12 19 20 21 23 25 28 29 29 31 33 35 LCS_GDT L 28 L 28 3 9 18 3 3 5 6 7 10 10 15 17 19 20 21 23 25 28 29 29 30 33 35 LCS_GDT R 29 R 29 3 7 18 3 3 6 6 7 11 12 16 17 19 21 22 23 25 28 29 30 31 33 35 LCS_GDT V 30 V 30 4 8 18 3 4 5 6 7 9 9 11 12 19 21 23 24 25 28 29 30 31 33 35 LCS_GDT T 31 T 31 4 8 18 3 4 5 6 7 9 9 11 12 15 19 23 24 25 28 28 30 31 33 35 LCS_GDT E 32 E 32 4 8 18 3 4 5 6 7 9 9 10 15 16 19 23 24 24 28 28 30 31 32 34 LCS_GDT R 33 R 33 4 8 18 3 4 6 6 7 9 9 10 12 14 15 18 18 21 24 26 28 29 29 31 LCS_GDT P 34 P 34 4 8 18 1 4 6 6 7 8 9 10 11 13 14 15 17 18 20 22 26 29 29 31 LCS_GDT F 35 F 35 4 8 18 3 4 6 6 7 8 9 10 15 16 18 23 24 25 28 29 30 31 33 35 LCS_GDT W 36 W 36 4 8 14 3 4 6 6 7 11 12 16 17 19 21 23 24 25 28 29 30 31 33 35 LCS_GDT I 37 I 37 4 8 14 3 4 6 6 7 8 9 11 17 19 21 23 24 25 28 29 30 31 33 35 LCS_GDT S 38 S 38 3 5 14 1 3 5 6 7 7 9 16 17 19 21 23 24 25 28 29 30 31 33 35 LCS_GDT S 39 S 39 4 5 14 1 4 4 5 7 7 8 11 11 15 19 23 24 25 28 29 30 31 33 35 LCS_GDT F 40 F 40 4 6 14 3 4 4 5 5 7 8 10 10 11 12 12 16 16 18 26 28 30 32 35 LCS_GDT I 41 I 41 5 6 14 3 4 5 5 6 6 8 10 12 15 19 23 24 25 28 28 28 31 33 35 LCS_GDT G 42 G 42 5 6 14 3 4 5 5 5 6 8 10 10 11 12 15 20 23 24 27 28 30 30 31 LCS_GDT R 43 R 43 5 6 14 3 4 5 5 6 6 7 8 10 11 12 14 15 15 18 20 22 24 29 29 LCS_GDT S 44 S 44 5 6 14 3 4 5 5 6 6 7 8 10 11 12 14 15 15 16 16 18 23 26 29 LCS_GDT K 45 K 45 5 6 14 3 4 5 5 5 6 7 8 10 11 12 14 15 15 16 16 18 19 20 21 LCS_AVERAGE LCS_A: 22.95 ( 11.62 17.10 40.13 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 8 9 9 9 11 12 16 17 19 21 23 24 25 28 29 30 31 33 35 GDT PERCENT_AT 15.91 18.18 20.45 20.45 20.45 25.00 27.27 36.36 38.64 43.18 47.73 52.27 54.55 56.82 63.64 65.91 68.18 70.45 75.00 79.55 GDT RMS_LOCAL 0.38 0.39 0.60 0.60 0.60 2.24 2.34 3.02 3.09 3.34 3.95 4.64 4.70 4.42 5.05 5.27 6.19 6.29 6.47 6.79 GDT RMS_ALL_AT 15.34 15.51 15.60 15.60 15.60 11.66 11.69 11.49 11.50 11.48 11.10 9.82 9.85 11.17 10.73 10.59 9.85 9.74 9.85 9.74 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 1.633 0 0.045 0.063 3.726 31.818 29.091 - LGA V 3 V 3 2.874 0 0.092 0.974 7.594 42.273 24.156 7.594 LGA Q 4 Q 4 1.756 0 0.179 1.059 9.148 46.364 21.414 9.148 LGA G 5 G 5 2.231 0 0.090 0.090 4.613 29.545 29.545 - LGA P 6 P 6 2.335 0 0.539 0.433 2.578 35.455 38.442 1.961 LGA W 7 W 7 3.625 0 0.088 1.249 10.523 10.000 2.857 8.865 LGA V 8 V 8 4.570 0 0.588 0.900 6.669 5.000 4.416 5.363 LGA G 9 G 9 7.542 0 0.467 0.467 8.776 0.000 0.000 - LGA S 10 S 10 12.441 0 0.049 0.530 14.936 0.000 0.000 14.328 LGA S 11 S 11 16.676 0 0.210 0.598 18.743 0.000 0.000 18.743 LGA Y 12 Y 12 14.872 0 0.060 0.932 15.676 0.000 0.000 14.736 LGA V 13 V 13 11.903 0 0.389 1.109 13.572 0.000 0.000 10.266 LGA A 14 A 14 17.569 0 0.198 0.201 20.337 0.000 0.000 - LGA E 15 E 15 20.299 0 0.119 1.455 26.331 0.000 0.000 26.290 LGA T 16 T 16 16.954 0 0.278 0.939 17.420 0.000 0.000 14.922 LGA G 17 G 17 11.444 0 0.075 0.075 13.218 0.000 0.000 - LGA Q 18 Q 18 8.459 0 0.650 1.013 14.810 0.000 0.000 11.220 LGA N 19 N 19 2.484 0 0.202 0.209 4.715 27.727 24.545 3.077 LGA W 20 W 20 3.056 0 0.590 1.210 12.795 39.545 11.299 12.128 LGA A 21 A 21 3.337 0 0.055 0.062 5.322 16.818 13.455 - LGA S 22 S 22 5.551 0 0.045 0.661 7.475 4.091 2.727 7.156 LGA L 23 L 23 3.743 0 0.051 0.977 9.974 21.818 10.909 9.124 LGA A 24 A 24 3.102 0 0.163 0.188 5.145 20.000 18.182 - LGA A 25 A 25 4.250 0 0.133 0.136 5.110 10.909 8.727 - LGA N 26 N 26 0.985 0 0.341 0.675 4.100 52.273 41.818 4.100 LGA E 27 E 27 6.172 0 0.203 1.291 11.610 1.364 0.606 11.453 LGA L 28 L 28 5.172 0 0.124 0.332 11.140 9.545 4.773 10.516 LGA R 29 R 29 2.581 0 0.250 1.430 6.489 17.727 28.430 6.489 LGA V 30 V 30 6.765 0 0.195 0.934 9.806 0.455 0.260 9.806 LGA T 31 T 31 13.022 0 0.274 0.232 16.895 0.000 0.000 14.885 LGA E 32 E 32 14.991 0 0.212 1.052 16.221 0.000 0.000 16.105 LGA R 33 R 33 16.808 0 0.082 1.248 18.144 0.000 0.000 15.915 LGA P 34 P 34 13.733 0 0.267 0.311 18.368 0.000 0.000 17.347 LGA F 35 F 35 6.526 0 0.140 1.393 9.055 0.000 21.488 1.655 LGA W 36 W 36 2.713 0 0.471 1.228 8.089 17.727 7.662 7.163 LGA I 37 I 37 5.510 0 0.139 0.899 9.283 4.545 2.273 8.614 LGA S 38 S 38 4.685 0 0.238 0.711 5.996 0.909 0.909 5.278 LGA S 39 S 39 7.733 0 0.264 0.735 11.545 0.000 0.000 10.070 LGA F 40 F 40 12.472 0 0.170 0.698 17.637 0.000 0.000 17.637 LGA I 41 I 41 12.468 0 0.284 0.330 15.055 0.000 0.000 7.045 LGA G 42 G 42 18.635 0 0.229 0.229 22.079 0.000 0.000 - LGA R 43 R 43 22.481 0 0.327 0.911 29.563 0.000 0.000 29.563 LGA S 44 S 44 24.036 0 0.132 0.475 25.763 0.000 0.000 23.436 LGA K 45 K 45 26.511 0 0.247 0.853 32.774 0.000 0.000 32.774 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 9.443 9.491 11.058 10.134 7.909 3.584 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 16 3.02 35.227 30.062 0.513 LGA_LOCAL RMSD: 3.017 Number of atoms: 16 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 11.492 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 9.443 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.421333 * X + -0.279785 * Y + 0.862670 * Z + -14.345840 Y_new = -0.767529 * X + 0.396692 * Y + 0.503523 * Z + 59.341473 Z_new = -0.483092 * X + -0.874274 * Y + -0.047603 * Z + 18.930849 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.068761 0.504183 -1.625191 [DEG: -61.2355 28.8876 -93.1166 ] ZXZ: 2.099129 1.618418 -2.636783 [DEG: 120.2712 92.7285 -151.0766 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS498_5-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS498_5-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 16 3.02 30.062 9.44 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS498_5-D1 PFRMAT TS TARGET T0953s2 MODEL 5 PARENT N/A ATOM 12 N ALA 2 11.116 37.155 16.003 1.00 17.66 N ATOM 14 CA ALA 2 10.252 36.523 14.995 1.00 17.66 C ATOM 15 CB ALA 2 8.794 36.806 15.333 1.00 17.66 C ATOM 16 C ALA 2 10.632 37.047 13.598 1.00 17.66 C ATOM 17 O ALA 2 10.983 38.225 13.457 1.00 17.66 O ATOM 18 N VAL 3 10.562 36.167 12.587 1.00 15.65 N ATOM 20 CA VAL 3 10.968 36.470 11.195 1.00 15.65 C ATOM 21 CB VAL 3 11.829 35.283 10.573 1.00 15.65 C ATOM 22 CG1 VAL 3 13.186 35.182 11.267 1.00 15.65 C ATOM 23 CG2 VAL 3 11.095 33.924 10.683 1.00 15.65 C ATOM 24 C VAL 3 9.880 36.884 10.190 1.00 15.65 C ATOM 25 O VAL 3 8.883 36.171 10.013 1.00 15.65 O ATOM 26 N GLN 4 10.098 38.041 9.545 1.00 12.34 N ATOM 28 CA GLN 4 9.195 38.578 8.515 1.00 12.34 C ATOM 29 CB GLN 4 8.844 40.074 8.752 1.00 12.34 C ATOM 30 CG GLN 4 9.996 41.112 8.759 1.00 12.34 C ATOM 31 CD GLN 4 9.504 42.527 9.000 1.00 12.34 C ATOM 32 OE1 GLN 4 9.441 42.987 10.140 1.00 12.34 O ATOM 33 NE2 GLN 4 9.153 43.224 7.925 1.00 12.34 N ATOM 36 C GLN 4 9.805 38.320 7.126 1.00 12.34 C ATOM 37 O GLN 4 10.802 38.941 6.733 1.00 12.34 O ATOM 38 N GLY 5 9.266 37.294 6.470 1.00 11.89 N ATOM 40 CA GLY 5 9.679 36.905 5.131 1.00 11.89 C ATOM 41 C GLY 5 8.377 36.835 4.364 1.00 11.89 C ATOM 42 O GLY 5 7.372 36.560 5.016 1.00 11.89 O ATOM 43 N PRO 6 8.343 36.940 3.012 1.00 11.90 N ATOM 44 CD PRO 6 9.416 37.308 2.061 1.00 11.90 C ATOM 45 CA PRO 6 7.049 36.882 2.320 1.00 11.90 C ATOM 46 CB PRO 6 7.399 37.339 0.899 1.00 11.90 C ATOM 47 CG PRO 6 8.819 36.941 0.734 1.00 11.90 C ATOM 48 C PRO 6 6.181 35.598 2.370 1.00 11.90 C ATOM 49 O PRO 6 6.451 34.600 1.688 1.00 11.90 O ATOM 50 N TRP 7 5.225 35.639 3.308 1.00 12.19 N ATOM 52 CA TRP 7 4.209 34.611 3.570 1.00 12.19 C ATOM 53 CB TRP 7 4.428 33.967 4.950 1.00 12.19 C ATOM 54 CG TRP 7 3.940 32.496 5.064 1.00 12.19 C ATOM 55 CD2 TRP 7 4.683 31.296 4.747 1.00 12.19 C ATOM 56 CE2 TRP 7 3.825 30.191 5.017 1.00 12.19 C ATOM 57 CE3 TRP 7 5.987 31.044 4.261 1.00 12.19 C ATOM 58 CD1 TRP 7 2.706 32.068 5.500 1.00 12.19 C ATOM 59 NE1 TRP 7 2.637 30.697 5.471 1.00 12.19 N ATOM 61 CZ2 TRP 7 4.227 28.847 4.817 1.00 12.19 C ATOM 62 CZ3 TRP 7 6.392 29.700 4.061 1.00 12.19 C ATOM 63 CH2 TRP 7 5.506 28.622 4.341 1.00 12.19 C ATOM 64 C TRP 7 2.971 35.521 3.541 1.00 12.19 C ATOM 65 O TRP 7 2.220 35.664 4.521 1.00 12.19 O ATOM 66 N VAL 8 2.741 36.037 2.333 1.00 10.38 N ATOM 68 CA VAL 8 1.733 37.042 1.996 1.00 10.38 C ATOM 69 CB VAL 8 2.262 38.055 0.937 1.00 10.38 C ATOM 70 CG1 VAL 8 1.932 39.494 1.373 1.00 10.38 C ATOM 71 CG2 VAL 8 3.759 37.909 0.699 1.00 10.38 C ATOM 72 C VAL 8 0.353 36.608 1.536 1.00 10.38 C ATOM 73 O VAL 8 0.106 35.446 1.199 1.00 10.38 O ATOM 74 N GLY 9 -0.525 37.615 1.556 1.00 10.91 N ATOM 76 CA GLY 9 -1.919 37.542 1.180 1.00 10.91 C ATOM 77 C GLY 9 -2.818 36.460 1.708 1.00 10.91 C ATOM 78 O GLY 9 -2.376 35.401 2.173 1.00 10.91 O ATOM 79 N SER 10 -4.109 36.783 1.639 1.00 12.80 N ATOM 81 CA SER 10 -5.172 35.941 2.143 1.00 12.80 C ATOM 82 CB SER 10 -6.072 36.802 3.019 1.00 12.80 C ATOM 83 OG SER 10 -5.274 37.603 3.874 1.00 12.80 O ATOM 85 C SER 10 -6.014 35.229 1.089 1.00 12.80 C ATOM 86 O SER 10 -6.651 34.217 1.404 1.00 12.80 O ATOM 87 N SER 11 -5.914 35.675 -0.168 1.00 13.80 N ATOM 89 CA SER 11 -6.703 35.104 -1.266 1.00 13.80 C ATOM 90 OG SER 11 -6.353 37.002 -2.772 1.00 13.80 O ATOM 92 C SER 11 -5.962 34.129 -2.193 1.00 13.80 C ATOM 93 O SER 11 -6.586 33.532 -3.083 1.00 13.80 O ATOM 94 CB SER 11 -7.332 36.233 -2.091 1.00 13.80 C ATOM 95 N TYR 12 -4.659 33.926 -1.962 1.00 12.41 N ATOM 97 CA TYR 12 -3.870 33.000 -2.788 1.00 12.41 C ATOM 98 CB TYR 12 -2.482 33.608 -3.094 1.00 12.41 C ATOM 99 CG TYR 12 -1.675 32.962 -4.233 1.00 12.41 C ATOM 100 CD1 TYR 12 -0.728 31.940 -3.972 1.00 12.41 C ATOM 101 CE1 TYR 12 0.047 31.365 -5.017 1.00 12.41 C ATOM 102 CD2 TYR 12 -1.826 33.393 -5.576 1.00 12.41 C ATOM 103 CE2 TYR 12 -1.056 32.823 -6.627 1.00 12.41 C ATOM 104 CZ TYR 12 -0.124 31.813 -6.336 1.00 12.41 C ATOM 105 OH TYR 12 0.622 31.260 -7.352 1.00 12.41 O ATOM 107 C TYR 12 -3.687 31.689 -2.040 1.00 12.41 C ATOM 108 O TYR 12 -3.400 30.651 -2.653 1.00 12.41 O ATOM 109 N VAL 13 -3.856 31.753 -0.715 1.00 13.00 N ATOM 111 CA VAL 13 -3.710 30.581 0.133 1.00 13.00 C ATOM 112 CB VAL 13 -2.417 30.634 1.004 1.00 13.00 C ATOM 113 CG1 VAL 13 -1.233 30.268 0.109 1.00 13.00 C ATOM 114 CG2 VAL 13 -2.209 32.019 1.648 1.00 13.00 C ATOM 115 C VAL 13 -4.978 30.102 0.853 1.00 13.00 C ATOM 116 O VAL 13 -4.928 29.549 1.965 1.00 13.00 O ATOM 117 N ALA 14 -6.113 30.283 0.164 1.00 15.45 N ATOM 119 CA ALA 14 -7.433 29.840 0.631 1.00 15.45 C ATOM 120 CB ALA 14 -8.531 30.688 0.018 1.00 15.45 C ATOM 121 C ALA 14 -7.580 28.401 0.144 1.00 15.45 C ATOM 122 O ALA 14 -8.591 27.751 0.425 1.00 15.45 O ATOM 123 N GLU 15 -6.537 27.904 -0.539 1.00 15.50 N ATOM 125 CA GLU 15 -6.549 26.553 -1.094 1.00 15.50 C ATOM 126 CB GLU 15 -5.915 26.552 -2.489 1.00 15.50 C ATOM 127 CG GLU 15 -6.850 27.004 -3.596 1.00 15.50 C ATOM 128 CD GLU 15 -6.190 26.991 -4.963 1.00 15.50 C ATOM 129 OE1 GLU 15 -6.260 25.949 -5.649 1.00 15.50 O ATOM 130 OE2 GLU 15 -5.607 28.024 -5.354 1.00 15.50 O ATOM 131 C GLU 15 -5.939 25.429 -0.257 1.00 15.50 C ATOM 132 O GLU 15 -6.671 24.501 0.078 1.00 15.50 O ATOM 133 N THR 16 -4.657 25.516 0.137 1.00 15.48 N ATOM 135 CA THR 16 -4.078 24.441 0.964 1.00 15.48 C ATOM 136 CB THR 16 -2.837 23.760 0.238 1.00 15.48 C ATOM 137 OG1 THR 16 -2.141 22.894 1.145 1.00 15.48 O ATOM 139 CG2 THR 16 -1.863 24.792 -0.369 1.00 15.48 C ATOM 140 C THR 16 -3.736 24.871 2.391 1.00 15.48 C ATOM 141 O THR 16 -4.409 24.453 3.333 1.00 15.48 O ATOM 142 N GLY 17 -2.646 25.635 2.521 1.00 15.79 N ATOM 144 CA GLY 17 -2.170 26.272 3.741 1.00 15.79 C ATOM 145 C GLY 17 -3.107 26.715 4.855 1.00 15.79 C ATOM 146 O GLY 17 -2.637 27.405 5.767 1.00 15.79 O ATOM 147 N GLN 18 -4.345 26.208 4.892 1.00 17.29 N ATOM 149 CA GLN 18 -5.371 26.692 5.823 1.00 17.29 C ATOM 150 CB GLN 18 -6.756 26.150 5.404 1.00 17.29 C ATOM 151 CG GLN 18 -6.983 24.638 5.609 1.00 17.29 C ATOM 152 CD GLN 18 -8.365 24.192 5.171 1.00 17.29 C ATOM 153 OE1 GLN 18 -9.310 24.198 5.961 1.00 17.29 O ATOM 154 NE2 GLN 18 -8.491 23.802 3.908 1.00 17.29 N ATOM 157 C GLN 18 -5.136 26.463 7.322 1.00 17.29 C ATOM 158 O GLN 18 -5.995 26.807 8.145 1.00 17.29 O ATOM 159 N ASN 19 -3.922 26.020 7.666 1.00 17.73 N ATOM 161 CA ASN 19 -3.554 25.826 9.063 1.00 17.73 C ATOM 162 CB ASN 19 -2.689 24.570 9.199 1.00 17.73 C ATOM 163 CG ASN 19 -3.464 23.289 8.925 1.00 17.73 C ATOM 164 OD1 ASN 19 -3.521 22.815 7.788 1.00 17.73 O ATOM 165 ND2 ASN 19 -4.047 22.712 9.973 1.00 17.73 N ATOM 168 C ASN 19 -2.767 27.070 9.503 1.00 17.73 C ATOM 169 O ASN 19 -2.238 27.118 10.615 1.00 17.73 O ATOM 170 N TRP 20 -2.745 28.094 8.638 1.00 16.66 N ATOM 172 CA TRP 20 -2.087 29.363 8.959 1.00 16.66 C ATOM 173 CB TRP 20 -1.169 29.830 7.809 1.00 16.66 C ATOM 174 CG TRP 20 -0.065 30.866 8.192 1.00 16.66 C ATOM 175 CD2 TRP 20 -0.124 32.304 8.056 1.00 16.66 C ATOM 176 CE2 TRP 20 1.111 32.820 8.542 1.00 16.66 C ATOM 177 CE3 TRP 20 -1.098 33.209 7.573 1.00 16.66 C ATOM 178 CD1 TRP 20 1.172 30.592 8.733 1.00 16.66 C ATOM 179 NE1 TRP 20 1.870 31.755 8.945 1.00 16.66 N ATOM 181 CZ2 TRP 20 1.403 34.205 8.563 1.00 16.66 C ATOM 182 CZ3 TRP 20 -0.808 34.595 7.592 1.00 16.66 C ATOM 183 CH2 TRP 20 0.438 35.074 8.086 1.00 16.66 C ATOM 184 C TRP 20 -3.125 30.437 9.351 1.00 16.66 C ATOM 185 O TRP 20 -2.760 31.598 9.589 1.00 16.66 O ATOM 186 N ALA 21 -4.390 30.017 9.517 1.00 17.91 N ATOM 188 CA ALA 21 -5.478 30.926 9.924 1.00 17.91 C ATOM 189 CB ALA 21 -6.825 30.382 9.521 1.00 17.91 C ATOM 190 C ALA 21 -5.401 30.955 11.432 1.00 17.91 C ATOM 191 O ALA 21 -5.814 31.928 12.066 1.00 17.91 O ATOM 192 N SER 22 -4.705 29.936 11.950 1.00 19.32 N ATOM 194 CA SER 22 -4.490 29.718 13.371 1.00 19.32 C ATOM 195 CB SER 22 -4.149 28.249 13.593 1.00 19.32 C ATOM 196 OG SER 22 -4.165 27.920 14.970 1.00 19.32 O ATOM 198 C SER 22 -3.362 30.608 13.895 1.00 19.32 C ATOM 199 O SER 22 -3.411 31.028 15.045 1.00 19.32 O ATOM 200 N LEU 23 -2.405 30.963 13.028 1.00 18.18 N ATOM 202 CA LEU 23 -1.297 31.837 13.432 1.00 18.18 C ATOM 203 CB LEU 23 0.010 31.459 12.700 1.00 18.18 C ATOM 204 CG LEU 23 1.362 31.465 13.457 1.00 18.18 C ATOM 205 CD1 LEU 23 2.189 30.269 13.009 1.00 18.18 C ATOM 206 CD2 LEU 23 2.144 32.772 13.241 1.00 18.18 C ATOM 207 C LEU 23 -1.645 33.325 13.230 1.00 18.18 C ATOM 208 O LEU 23 -1.082 34.187 13.916 1.00 18.18 O ATOM 209 N ALA 24 -2.556 33.611 12.288 1.00 17.45 N ATOM 211 CA ALA 24 -2.995 34.988 12.006 1.00 17.45 C ATOM 212 CB ALA 24 -3.259 35.180 10.530 1.00 17.45 C ATOM 213 C ALA 24 -4.130 35.613 12.846 1.00 17.45 C ATOM 214 O ALA 24 -4.308 36.834 12.780 1.00 17.45 O ATOM 215 N ALA 25 -4.898 34.803 13.598 1.00 20.82 N ATOM 217 CA ALA 25 -6.005 35.313 14.447 1.00 20.82 C ATOM 218 CB ALA 25 -7.099 34.280 14.558 1.00 20.82 C ATOM 219 C ALA 25 -5.543 35.743 15.852 1.00 20.82 C ATOM 220 O ALA 25 -6.201 36.540 16.525 1.00 20.82 O ATOM 221 N ASN 26 -4.369 35.228 16.230 1.00 20.56 N ATOM 223 CA ASN 26 -3.621 35.476 17.478 1.00 20.56 C ATOM 224 CB ASN 26 -2.960 34.178 17.973 1.00 20.56 C ATOM 225 CG ASN 26 -3.821 33.432 18.998 1.00 20.56 C ATOM 226 OD1 ASN 26 -3.703 33.653 20.205 1.00 20.56 O ATOM 227 ND2 ASN 26 -4.679 32.536 18.514 1.00 20.56 N ATOM 230 C ASN 26 -2.614 36.595 17.110 1.00 20.56 C ATOM 231 O ASN 26 -1.512 36.702 17.680 1.00 20.56 O ATOM 232 N GLU 27 -3.094 37.487 16.232 1.00 18.55 N ATOM 234 CA GLU 27 -2.320 38.532 15.542 1.00 18.55 C ATOM 235 CG GLU 27 -4.337 40.159 14.847 1.00 18.55 C ATOM 236 CD GLU 27 -5.694 39.521 15.131 1.00 18.55 C ATOM 237 OE1 GLU 27 -5.983 39.238 16.313 1.00 18.55 O ATOM 238 OE2 GLU 27 -6.464 39.304 14.172 1.00 18.55 O ATOM 239 C GLU 27 -1.604 39.743 16.152 1.00 18.55 C ATOM 240 O GLU 27 -1.030 40.537 15.384 1.00 18.55 O ATOM 241 CB GLU 27 -3.226 39.123 14.423 1.00 18.55 C ATOM 242 N LEU 28 -1.536 39.891 17.474 1.00 19.52 N ATOM 244 CA LEU 28 -0.899 41.119 17.949 1.00 19.52 C ATOM 245 CB LEU 28 -1.956 41.926 18.722 1.00 19.52 C ATOM 246 CG LEU 28 -3.339 42.217 18.102 1.00 19.52 C ATOM 247 CD1 LEU 28 -4.427 41.932 19.131 1.00 19.52 C ATOM 248 CD2 LEU 28 -3.446 43.663 17.595 1.00 19.52 C ATOM 249 C LEU 28 0.454 41.185 18.683 1.00 19.52 C ATOM 250 O LEU 28 0.904 42.291 18.989 1.00 19.52 O ATOM 251 N ARG 29 1.156 40.061 18.872 1.00 18.45 N ATOM 253 CA ARG 29 2.456 40.096 19.580 1.00 18.45 C ATOM 254 CB ARG 29 2.407 39.134 20.772 1.00 18.45 C ATOM 255 CG ARG 29 1.640 39.677 21.966 1.00 18.45 C ATOM 256 CD ARG 29 1.613 38.691 23.134 1.00 18.45 C ATOM 257 NE ARG 29 2.922 38.529 23.773 1.00 18.45 N ATOM 259 CZ ARG 29 3.175 37.730 24.811 1.00 18.45 C ATOM 260 NH1 ARG 29 4.406 37.668 25.303 1.00 18.45 N ATOM 263 NH2 ARG 29 2.217 36.993 25.365 1.00 18.45 N ATOM 266 C ARG 29 3.820 39.928 18.887 1.00 18.45 C ATOM 267 O ARG 29 4.855 40.211 19.506 1.00 18.45 O ATOM 268 N VAL 30 3.836 39.535 17.610 1.00 15.96 N ATOM 270 CA VAL 30 5.096 39.263 16.875 1.00 15.96 C ATOM 271 CB VAL 30 5.358 37.717 16.733 1.00 15.96 C ATOM 272 CG1 VAL 30 5.912 37.176 18.046 1.00 15.96 C ATOM 273 CG2 VAL 30 4.080 36.955 16.329 1.00 15.96 C ATOM 274 C VAL 30 5.543 39.989 15.585 1.00 15.96 C ATOM 275 O VAL 30 4.717 40.528 14.846 1.00 15.96 O ATOM 276 N THR 31 6.867 40.027 15.359 1.00 15.47 N ATOM 278 CA THR 31 7.484 40.621 14.155 1.00 15.47 C ATOM 279 CB THR 31 8.716 41.480 14.521 1.00 15.47 C ATOM 280 OG1 THR 31 9.621 40.714 15.327 1.00 15.47 O ATOM 282 CG2 THR 31 8.278 42.723 15.286 1.00 15.47 C ATOM 283 C THR 31 7.807 39.491 13.134 1.00 15.47 C ATOM 284 O THR 31 8.836 39.484 12.446 1.00 15.47 O ATOM 285 N GLU 32 6.834 38.580 13.045 1.00 15.88 N ATOM 287 CA GLU 32 6.749 37.373 12.200 1.00 15.88 C ATOM 288 CB GLU 32 6.031 36.206 12.899 1.00 15.88 C ATOM 289 CG GLU 32 6.759 34.846 12.758 1.00 15.88 C ATOM 290 CD GLU 32 6.057 33.721 13.495 1.00 15.88 C ATOM 291 OE1 GLU 32 5.280 32.985 12.853 1.00 15.88 O ATOM 292 OE2 GLU 32 6.288 33.568 14.713 1.00 15.88 O ATOM 293 C GLU 32 6.267 37.599 10.751 1.00 15.88 C ATOM 294 O GLU 32 6.302 38.725 10.240 1.00 15.88 O ATOM 295 N ARG 33 5.856 36.496 10.113 1.00 16.15 N ATOM 297 CA ARG 33 5.442 36.360 8.708 1.00 16.15 C ATOM 298 CB ARG 33 5.021 34.898 8.490 1.00 16.15 C ATOM 299 CG ARG 33 6.081 33.882 8.916 1.00 16.15 C ATOM 300 CD ARG 33 5.502 32.654 9.626 1.00 16.15 C ATOM 301 NE ARG 33 4.841 31.711 8.722 1.00 16.15 N ATOM 303 CZ ARG 33 4.716 30.401 8.946 1.00 16.15 C ATOM 304 NH1 ARG 33 5.204 29.843 10.050 1.00 16.15 N ATOM 307 NH2 ARG 33 4.080 29.643 8.065 1.00 16.15 N ATOM 310 C ARG 33 4.249 37.285 8.368 1.00 16.15 C ATOM 311 O ARG 33 3.415 37.559 9.229 1.00 16.15 O ATOM 312 N PRO 34 4.123 37.716 7.078 1.00 15.00 N ATOM 313 CD PRO 34 5.106 37.471 6.006 1.00 15.00 C ATOM 314 CA PRO 34 3.099 38.628 6.562 1.00 15.00 C ATOM 315 CB PRO 34 3.396 38.652 5.072 1.00 15.00 C ATOM 316 CG PRO 34 4.825 38.562 5.035 1.00 15.00 C ATOM 317 C PRO 34 1.591 38.621 6.792 1.00 15.00 C ATOM 318 O PRO 34 0.845 37.688 6.466 1.00 15.00 O ATOM 319 N PHE 35 1.235 39.727 7.457 1.00 14.14 N ATOM 321 CA PHE 35 -0.092 40.205 7.834 1.00 14.14 C ATOM 322 CB PHE 35 -0.280 40.222 9.368 1.00 14.14 C ATOM 323 CG PHE 35 -1.729 40.096 9.825 1.00 14.14 C ATOM 324 CD1 PHE 35 -2.347 38.832 9.972 1.00 14.14 C ATOM 325 CD2 PHE 35 -2.484 41.253 10.136 1.00 14.14 C ATOM 326 CE1 PHE 35 -3.692 38.722 10.421 1.00 14.14 C ATOM 327 CE2 PHE 35 -3.829 41.157 10.585 1.00 14.14 C ATOM 328 CZ PHE 35 -4.435 39.887 10.726 1.00 14.14 C ATOM 329 C PHE 35 0.059 41.608 7.222 1.00 14.14 C ATOM 330 O PHE 35 1.016 42.328 7.527 1.00 14.14 O ATOM 331 N TRP 36 -0.891 41.999 6.383 1.00 12.36 N ATOM 333 CA TRP 36 -0.794 43.221 5.581 1.00 12.36 C ATOM 334 CB TRP 36 -1.841 43.112 4.464 1.00 12.36 C ATOM 335 CG TRP 36 -2.822 41.910 4.553 1.00 12.36 C ATOM 336 CD2 TRP 36 -3.937 41.738 5.460 1.00 12.36 C ATOM 337 CE2 TRP 36 -4.555 40.499 5.131 1.00 12.36 C ATOM 338 CE3 TRP 36 -4.475 42.508 6.518 1.00 12.36 C ATOM 339 CD1 TRP 36 -2.821 40.798 3.747 1.00 12.36 C ATOM 340 NE1 TRP 36 -3.852 39.957 4.088 1.00 12.36 N ATOM 342 CZ2 TRP 36 -5.690 40.005 5.821 1.00 12.36 C ATOM 343 CZ3 TRP 36 -5.611 42.016 7.211 1.00 12.36 C ATOM 344 CH2 TRP 36 -6.200 40.773 6.852 1.00 12.36 C ATOM 345 C TRP 36 -0.873 44.612 6.205 1.00 12.36 C ATOM 346 O TRP 36 -1.539 45.508 5.678 1.00 12.36 O ATOM 347 N ILE 37 -0.167 44.791 7.327 1.00 10.25 N ATOM 349 CA ILE 37 -0.109 46.094 7.981 1.00 10.25 C ATOM 350 CB ILE 37 -0.300 45.969 9.536 1.00 10.25 C ATOM 351 CG2 ILE 37 0.077 47.288 10.283 1.00 10.25 C ATOM 352 CG1 ILE 37 -1.765 45.637 9.832 1.00 10.25 C ATOM 353 CD1 ILE 37 -1.999 44.710 11.036 1.00 10.25 C ATOM 354 C ILE 37 1.083 47.008 7.671 1.00 10.25 C ATOM 355 O ILE 37 0.871 48.170 7.318 1.00 10.25 O ATOM 356 N SER 38 2.312 46.476 7.725 1.00 7.91 N ATOM 358 CA SER 38 3.464 47.367 7.591 1.00 7.91 C ATOM 359 CB SER 38 4.401 47.090 8.768 1.00 7.91 C ATOM 360 OG SER 38 3.937 47.760 9.925 1.00 7.91 O ATOM 362 C SER 38 4.358 47.888 6.482 1.00 7.91 C ATOM 363 O SER 38 4.394 49.111 6.306 1.00 7.91 O ATOM 364 N SER 39 5.037 47.045 5.700 1.00 7.05 N ATOM 366 CA SER 39 5.997 47.665 4.789 1.00 7.05 C ATOM 367 CB SER 39 7.393 47.238 5.253 1.00 7.05 C ATOM 368 OG SER 39 7.677 47.805 6.518 1.00 7.05 O ATOM 370 C SER 39 6.111 47.943 3.305 1.00 7.05 C ATOM 371 O SER 39 6.235 49.113 2.924 1.00 7.05 O ATOM 372 N PHE 40 6.034 46.912 2.459 1.00 6.58 N ATOM 374 CA PHE 40 6.342 47.139 1.043 1.00 6.58 C ATOM 375 CB PHE 40 7.710 46.474 0.753 1.00 6.58 C ATOM 376 CG PHE 40 8.849 46.902 1.674 1.00 6.58 C ATOM 377 CD1 PHE 40 9.410 48.203 1.603 1.00 6.58 C ATOM 378 CD2 PHE 40 9.406 45.979 2.587 1.00 6.58 C ATOM 379 CE1 PHE 40 10.507 48.576 2.428 1.00 6.58 C ATOM 380 CE2 PHE 40 10.504 46.338 3.418 1.00 6.58 C ATOM 381 CZ PHE 40 11.055 47.640 3.338 1.00 6.58 C ATOM 382 C PHE 40 5.573 46.967 -0.255 1.00 6.58 C ATOM 383 O PHE 40 5.856 47.710 -1.207 1.00 6.58 O ATOM 384 N ILE 41 4.568 46.093 -0.315 1.00 5.63 N ATOM 386 CA ILE 41 3.973 45.812 -1.627 1.00 5.63 C ATOM 387 CB ILE 41 3.885 44.239 -1.888 1.00 5.63 C ATOM 388 CG2 ILE 41 3.163 43.896 -3.225 1.00 5.63 C ATOM 389 CG1 ILE 41 5.321 43.665 -1.953 1.00 5.63 C ATOM 390 CD1 ILE 41 5.519 42.330 -1.220 1.00 5.63 C ATOM 391 C ILE 41 2.908 46.697 -2.287 1.00 5.63 C ATOM 392 O ILE 41 1.700 46.425 -2.293 1.00 5.63 O ATOM 393 N GLY 42 3.443 47.848 -2.694 1.00 5.75 N ATOM 395 CA GLY 42 2.784 48.913 -3.430 1.00 5.75 C ATOM 396 C GLY 42 1.304 49.183 -3.638 1.00 5.75 C ATOM 397 O GLY 42 0.875 50.329 -3.466 1.00 5.75 O ATOM 398 N ARG 43 0.523 48.136 -3.924 1.00 5.05 N ATOM 400 CA ARG 43 -0.906 48.280 -4.239 1.00 5.05 C ATOM 401 CB ARG 43 -1.118 48.143 -5.760 1.00 5.05 C ATOM 402 CG ARG 43 -0.354 46.978 -6.432 1.00 5.05 C ATOM 403 CD ARG 43 -0.614 46.908 -7.936 1.00 5.05 C ATOM 404 NE ARG 43 -1.985 46.499 -8.258 1.00 5.05 N ATOM 406 CZ ARG 43 -2.475 46.360 -9.492 1.00 5.05 C ATOM 407 NH1 ARG 43 -1.723 46.592 -10.563 1.00 5.05 N ATOM 410 NH2 ARG 43 -3.736 45.983 -9.654 1.00 5.05 N ATOM 413 C ARG 43 -1.951 47.447 -3.493 1.00 5.05 C ATOM 414 O ARG 43 -2.348 46.371 -3.967 1.00 5.05 O ATOM 415 N SER 44 -2.341 47.901 -2.299 1.00 4.13 N ATOM 417 CA SER 44 -3.376 47.205 -1.539 1.00 4.13 C ATOM 418 CB SER 44 -2.800 46.282 -0.465 1.00 4.13 C ATOM 419 OG SER 44 -3.199 44.949 -0.754 1.00 4.13 O ATOM 421 C SER 44 -4.579 47.977 -1.019 1.00 4.13 C ATOM 422 O SER 44 -4.654 49.210 -1.104 1.00 4.13 O ATOM 423 N LYS 45 -5.546 47.174 -0.567 1.00 3.68 N ATOM 425 CA LYS 45 -6.849 47.547 -0.019 1.00 3.68 C ATOM 426 CG LYS 45 -7.646 46.835 -2.349 1.00 3.68 C ATOM 427 CD LYS 45 -8.786 46.174 -3.120 1.00 3.68 C ATOM 428 CE LYS 45 -8.503 46.102 -4.619 1.00 3.68 C ATOM 429 NZ LYS 45 -8.506 47.436 -5.291 1.00 3.68 N ATOM 433 C LYS 45 -6.839 46.982 1.398 1.00 3.68 C ATOM 434 O LYS 45 -7.217 45.827 1.645 1.00 3.68 O ATOM 435 CB LYS 45 -7.949 46.896 -0.853 1.00 3.68 C TER END