####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS498_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS498_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 4 - 26 4.87 8.66 LONGEST_CONTINUOUS_SEGMENT: 23 8 - 30 4.95 10.64 LONGEST_CONTINUOUS_SEGMENT: 23 9 - 31 4.92 11.04 LCS_AVERAGE: 47.06 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 19 - 29 1.71 12.90 LCS_AVERAGE: 19.06 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.84 13.13 LCS_AVERAGE: 12.96 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 21 3 3 4 5 5 7 11 12 14 15 17 21 27 28 31 31 34 36 36 38 LCS_GDT V 3 V 3 4 6 22 3 3 4 4 5 6 7 9 12 15 15 16 17 22 26 28 32 36 36 38 LCS_GDT Q 4 Q 4 4 6 23 3 3 5 5 6 7 9 12 14 15 20 24 29 30 31 31 34 36 36 38 LCS_GDT G 5 G 5 4 6 23 3 3 5 5 5 6 10 15 18 23 24 26 29 30 31 31 34 36 36 38 LCS_GDT P 6 P 6 4 6 23 3 3 4 4 8 11 15 17 19 23 24 26 29 30 31 31 34 36 36 38 LCS_GDT W 7 W 7 3 6 23 3 3 4 4 5 8 10 17 19 23 24 26 29 30 31 31 34 36 36 38 LCS_GDT V 8 V 8 3 5 23 4 4 6 10 11 11 15 17 19 23 24 26 29 30 31 31 34 36 36 38 LCS_GDT G 9 G 9 3 6 23 4 4 6 8 11 11 15 17 19 23 24 26 29 30 31 31 34 36 36 38 LCS_GDT S 10 S 10 4 7 23 4 4 10 11 11 11 15 17 19 23 24 26 29 30 31 31 34 36 36 38 LCS_GDT S 11 S 11 4 7 23 3 4 5 7 7 9 12 14 18 22 24 26 29 30 31 31 34 36 36 38 LCS_GDT Y 12 Y 12 4 7 23 3 4 5 7 7 9 10 11 14 16 19 20 25 27 30 31 34 36 36 38 LCS_GDT V 13 V 13 4 7 23 4 4 5 7 7 8 13 15 19 23 24 26 29 30 31 31 34 36 36 38 LCS_GDT A 14 A 14 4 7 23 4 4 6 8 11 11 15 17 19 23 24 26 29 30 31 31 34 36 36 38 LCS_GDT E 15 E 15 4 7 23 4 4 4 8 11 11 15 17 19 23 24 26 29 30 31 31 34 36 36 38 LCS_GDT T 16 T 16 4 7 23 4 4 5 7 8 9 13 16 19 23 24 26 29 30 31 31 34 36 36 38 LCS_GDT G 17 G 17 5 6 23 3 4 5 7 11 11 15 17 19 23 24 26 29 30 31 31 34 36 36 38 LCS_GDT Q 18 Q 18 5 6 23 3 4 5 7 10 11 15 17 19 23 24 26 29 30 31 31 34 36 36 38 LCS_GDT N 19 N 19 5 11 23 3 4 5 6 8 11 15 17 19 23 24 26 29 30 31 31 34 36 36 38 LCS_GDT W 20 W 20 10 11 23 6 9 10 11 11 11 15 17 19 23 24 26 29 30 31 31 34 36 36 38 LCS_GDT A 21 A 21 10 11 23 6 9 10 11 11 11 14 16 19 23 24 26 29 30 31 31 34 36 36 38 LCS_GDT S 22 S 22 10 11 23 6 9 10 11 11 11 13 15 19 23 24 26 29 30 31 31 34 36 36 38 LCS_GDT L 23 L 23 10 11 23 6 9 10 11 11 11 12 15 18 23 24 26 29 30 31 31 34 36 36 38 LCS_GDT A 24 A 24 10 11 23 6 9 10 11 11 11 12 13 15 19 23 26 29 30 31 31 34 36 36 38 LCS_GDT A 25 A 25 10 11 23 6 9 10 11 11 11 12 13 14 15 17 21 23 28 29 31 34 36 36 38 LCS_GDT N 26 N 26 10 11 23 6 9 10 11 11 11 12 13 14 15 16 19 22 28 29 31 34 36 36 38 LCS_GDT E 27 E 27 10 11 23 4 9 10 11 11 11 12 13 14 15 16 19 22 23 26 31 34 35 36 38 LCS_GDT L 28 L 28 10 11 23 3 9 10 11 11 11 12 13 14 15 16 19 22 23 25 26 34 35 36 37 LCS_GDT R 29 R 29 10 11 23 3 5 9 11 11 11 12 13 14 15 16 17 21 23 24 26 28 31 35 36 LCS_GDT V 30 V 30 4 5 23 3 4 5 5 7 10 11 11 14 15 16 19 22 23 25 30 34 35 36 37 LCS_GDT T 31 T 31 4 5 23 3 4 5 5 7 10 11 11 11 14 15 17 22 23 25 30 34 35 36 37 LCS_GDT E 32 E 32 4 5 16 3 4 5 5 6 8 11 11 11 14 15 19 23 28 29 31 34 36 36 38 LCS_GDT R 33 R 33 3 5 16 3 3 5 5 7 10 11 12 13 14 18 23 26 30 30 31 34 36 36 38 LCS_GDT P 34 P 34 4 10 16 3 4 5 7 9 11 12 12 13 16 20 23 29 30 31 31 33 36 36 38 LCS_GDT F 35 F 35 4 10 16 3 4 5 8 10 11 12 12 13 16 20 23 29 30 31 31 33 36 36 38 LCS_GDT W 36 W 36 6 10 16 3 5 6 8 10 11 13 17 19 23 24 26 29 30 31 31 33 36 36 38 LCS_GDT I 37 I 37 6 10 16 3 5 6 8 10 11 12 12 13 15 20 24 27 29 31 31 32 35 36 37 LCS_GDT S 38 S 38 6 10 16 3 5 6 8 10 11 15 17 19 23 24 26 29 30 31 31 33 36 36 38 LCS_GDT S 39 S 39 6 10 16 4 5 6 8 11 11 15 17 19 23 24 26 29 30 31 31 34 36 36 38 LCS_GDT F 40 F 40 6 10 16 3 5 6 8 10 11 15 17 19 23 24 26 29 30 31 31 33 36 36 38 LCS_GDT I 41 I 41 6 10 16 3 4 6 8 11 11 15 17 19 23 24 26 29 30 31 31 34 36 36 38 LCS_GDT G 42 G 42 5 10 16 3 4 6 8 11 11 15 17 19 23 24 26 29 30 31 31 34 36 36 38 LCS_GDT R 43 R 43 5 10 16 3 4 5 8 10 11 12 13 17 21 23 26 29 30 31 31 34 36 36 38 LCS_GDT S 44 S 44 5 10 16 3 4 5 8 10 11 12 12 13 15 17 19 20 22 26 28 32 33 36 38 LCS_GDT K 45 K 45 5 10 16 3 4 5 8 10 11 12 12 13 14 14 15 15 17 19 20 20 20 25 26 LCS_AVERAGE LCS_A: 26.36 ( 12.96 19.06 47.06 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 9 10 11 11 11 15 17 19 23 24 26 29 30 31 31 34 36 36 38 GDT PERCENT_AT 13.64 20.45 22.73 25.00 25.00 25.00 34.09 38.64 43.18 52.27 54.55 59.09 65.91 68.18 70.45 70.45 77.27 81.82 81.82 86.36 GDT RMS_LOCAL 0.35 0.64 0.93 1.07 1.07 1.07 2.61 2.82 3.17 3.60 3.69 4.02 4.53 4.75 4.77 4.76 6.24 5.98 5.77 6.38 GDT RMS_ALL_AT 13.69 13.34 13.95 13.78 13.78 13.78 10.00 10.01 9.71 9.54 9.57 9.27 8.97 8.69 9.05 9.11 8.03 8.12 8.53 7.97 # Checking swapping # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 9.258 0 0.147 0.189 10.798 0.000 0.000 - LGA V 3 V 3 11.332 0 0.077 0.932 14.158 0.000 0.000 14.158 LGA Q 4 Q 4 7.888 0 0.164 0.776 12.478 0.000 0.000 12.478 LGA G 5 G 5 5.179 0 0.114 0.114 5.657 1.818 1.818 - LGA P 6 P 6 2.833 0 0.681 0.643 4.248 28.636 21.818 4.116 LGA W 7 W 7 3.848 0 0.389 1.188 9.529 17.727 5.065 9.529 LGA V 8 V 8 3.223 0 0.581 0.964 6.623 30.000 17.143 5.944 LGA G 9 G 9 3.682 0 0.544 0.544 6.049 8.636 8.636 - LGA S 10 S 10 2.550 0 0.459 0.542 3.203 42.273 35.758 3.203 LGA S 11 S 11 5.606 0 0.181 0.556 10.172 2.727 1.818 10.172 LGA Y 12 Y 12 8.567 0 0.061 0.457 14.757 0.000 0.000 14.757 LGA V 13 V 13 5.577 0 0.361 1.084 8.338 1.364 0.779 5.993 LGA A 14 A 14 1.783 0 0.087 0.094 2.675 52.273 54.909 - LGA E 15 E 15 3.397 0 0.211 1.121 5.130 15.455 12.121 4.656 LGA T 16 T 16 5.914 0 0.146 1.005 10.226 1.818 1.039 7.573 LGA G 17 G 17 2.564 0 0.297 0.297 3.240 27.727 27.727 - LGA Q 18 Q 18 1.734 0 0.261 0.985 5.376 50.909 35.354 5.376 LGA N 19 N 19 2.610 0 0.447 0.378 3.778 28.636 23.636 2.969 LGA W 20 W 20 1.575 0 0.507 1.239 12.747 48.636 14.675 12.525 LGA A 21 A 21 5.323 0 0.061 0.073 8.115 4.545 3.636 - LGA S 22 S 22 7.023 0 0.021 0.556 8.738 0.000 0.000 6.496 LGA L 23 L 23 6.700 0 0.038 0.906 9.544 0.000 0.000 8.810 LGA A 24 A 24 8.112 0 0.100 0.114 11.693 0.000 0.000 - LGA A 25 A 25 12.522 0 0.136 0.143 16.350 0.000 0.000 - LGA N 26 N 26 15.425 0 0.115 0.842 18.108 0.000 0.000 14.212 LGA E 27 E 27 16.321 0 0.151 0.876 18.148 0.000 0.000 14.288 LGA L 28 L 28 17.425 0 0.040 1.079 20.250 0.000 0.000 14.029 LGA R 29 R 29 22.196 0 0.372 1.058 28.190 0.000 0.000 28.190 LGA V 30 V 30 19.953 0 0.175 1.202 22.115 0.000 0.000 18.687 LGA T 31 T 31 21.763 0 0.732 0.575 25.260 0.000 0.000 21.670 LGA E 32 E 32 17.768 0 0.243 1.061 21.854 0.000 0.000 20.945 LGA R 33 R 33 12.970 0 0.191 1.410 14.752 0.000 0.000 12.373 LGA P 34 P 34 9.179 0 0.041 0.306 9.474 0.000 0.000 6.148 LGA F 35 F 35 8.275 0 0.114 0.207 14.040 0.000 0.000 13.829 LGA W 36 W 36 3.708 0 0.132 1.276 9.581 4.545 3.636 9.581 LGA I 37 I 37 5.385 0 0.052 1.505 9.725 3.182 1.591 8.135 LGA S 38 S 38 3.508 0 0.125 0.658 5.765 21.364 14.545 5.765 LGA S 39 S 39 3.077 0 0.147 0.180 6.024 29.091 19.394 6.024 LGA F 40 F 40 3.183 0 0.325 1.419 4.962 39.545 18.678 3.717 LGA I 41 I 41 1.127 0 0.552 1.270 4.468 55.909 42.045 4.468 LGA G 42 G 42 1.064 0 0.255 0.255 2.730 52.273 52.273 - LGA R 43 R 43 6.613 0 0.196 1.712 9.616 2.727 0.992 9.616 LGA S 44 S 44 12.947 0 0.253 0.592 15.228 0.000 0.000 13.062 LGA K 45 K 45 20.211 0 0.186 0.743 28.328 0.000 0.000 28.328 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 7.755 7.700 9.201 12.996 9.525 1.974 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 17 2.82 38.636 34.281 0.583 LGA_LOCAL RMSD: 2.817 Number of atoms: 17 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 10.014 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 7.755 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.133512 * X + 0.966625 * Y + 0.218657 * Z + 8.675343 Y_new = 0.950931 * X + -0.187088 * Y + 0.246432 * Z + 69.014183 Z_new = 0.279116 * X + 0.175026 * Y + -0.944172 * Z + 16.030294 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.431307 -0.282873 2.958298 [DEG: 82.0079 -16.2074 169.4980 ] ZXZ: 2.415844 2.805868 1.010707 [DEG: 138.4177 160.7644 57.9093 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS498_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS498_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 17 2.82 34.281 7.75 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS498_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 PARENT N/A ATOM 12 N ALA 2 17.299 41.542 8.583 1.00 13.77 N ATOM 14 CA ALA 2 15.979 41.404 7.965 1.00 13.77 C ATOM 15 CB ALA 2 14.868 41.718 8.973 1.00 13.77 C ATOM 16 C ALA 2 15.885 42.331 6.741 1.00 13.77 C ATOM 17 O ALA 2 16.027 43.555 6.859 1.00 13.77 O ATOM 18 N VAL 3 15.732 41.707 5.566 1.00 12.73 N ATOM 20 CA VAL 3 15.599 42.374 4.254 1.00 12.73 C ATOM 21 CB VAL 3 16.410 41.641 3.108 1.00 12.73 C ATOM 22 CG1 VAL 3 17.866 42.043 3.170 1.00 12.73 C ATOM 23 CG2 VAL 3 16.294 40.100 3.205 1.00 12.73 C ATOM 24 C VAL 3 14.097 42.417 3.874 1.00 12.73 C ATOM 25 O VAL 3 13.351 41.508 4.261 1.00 12.73 O ATOM 26 N GLN 4 13.662 43.467 3.160 1.00 11.65 N ATOM 28 CA GLN 4 12.253 43.616 2.754 1.00 11.65 C ATOM 29 CB GLN 4 11.694 44.990 3.132 1.00 11.65 C ATOM 30 CG GLN 4 10.974 45.006 4.468 1.00 11.65 C ATOM 31 CD GLN 4 10.281 46.329 4.741 1.00 11.65 C ATOM 32 OE1 GLN 4 9.110 46.508 4.404 1.00 11.65 O ATOM 33 NE2 GLN 4 11.000 47.263 5.352 1.00 11.65 N ATOM 36 C GLN 4 11.888 43.274 1.306 1.00 11.65 C ATOM 37 O GLN 4 12.443 43.815 0.343 1.00 11.65 O ATOM 38 N GLY 5 10.990 42.295 1.216 1.00 11.69 N ATOM 40 CA GLY 5 10.437 41.751 -0.015 1.00 11.69 C ATOM 41 C GLY 5 9.045 41.320 0.390 1.00 11.69 C ATOM 42 O GLY 5 8.612 41.682 1.494 1.00 11.69 O ATOM 43 N PRO 6 8.309 40.561 -0.455 1.00 10.70 N ATOM 44 CD PRO 6 8.717 40.151 -1.817 1.00 10.70 C ATOM 45 CA PRO 6 6.947 40.072 -0.191 1.00 10.70 C ATOM 46 CB PRO 6 6.648 39.236 -1.433 1.00 10.70 C ATOM 47 CG PRO 6 7.400 39.918 -2.478 1.00 10.70 C ATOM 48 C PRO 6 6.870 39.190 1.062 1.00 10.70 C ATOM 49 O PRO 6 7.889 38.953 1.715 1.00 10.70 O ATOM 50 N TRP 7 5.677 38.668 1.352 1.00 9.90 N ATOM 52 CA TRP 7 5.427 37.822 2.525 1.00 9.90 C ATOM 53 CB TRP 7 3.907 37.638 2.712 1.00 9.90 C ATOM 54 CG TRP 7 3.078 37.544 1.393 1.00 9.90 C ATOM 55 CD2 TRP 7 2.611 38.637 0.566 1.00 9.90 C ATOM 56 CE2 TRP 7 1.909 38.061 -0.530 1.00 9.90 C ATOM 57 CE3 TRP 7 2.722 40.045 0.641 1.00 9.90 C ATOM 58 CD1 TRP 7 2.639 36.394 0.776 1.00 9.90 C ATOM 59 NE1 TRP 7 1.945 36.701 -0.370 1.00 9.90 N ATOM 61 CZ2 TRP 7 1.315 38.843 -1.550 1.00 9.90 C ATOM 62 CZ3 TRP 7 2.129 40.830 -0.379 1.00 9.90 C ATOM 63 CH2 TRP 7 1.434 40.218 -1.459 1.00 9.90 C ATOM 64 C TRP 7 6.118 36.507 2.171 1.00 9.90 C ATOM 65 O TRP 7 5.980 36.011 1.042 1.00 9.90 O ATOM 66 N VAL 8 6.882 35.973 3.129 1.00 10.19 N ATOM 68 CA VAL 8 7.678 34.773 2.895 1.00 10.19 C ATOM 69 CB VAL 8 9.114 34.916 3.568 1.00 10.19 C ATOM 70 CG1 VAL 8 8.998 35.272 5.047 1.00 10.19 C ATOM 71 CG2 VAL 8 9.998 33.677 3.336 1.00 10.19 C ATOM 72 C VAL 8 6.941 33.496 3.252 1.00 10.19 C ATOM 73 O VAL 8 6.803 33.106 4.421 1.00 10.19 O ATOM 74 N GLY 9 6.385 32.920 2.188 1.00 11.41 N ATOM 76 CA GLY 9 5.666 31.681 2.294 1.00 11.41 C ATOM 77 C GLY 9 6.524 30.452 2.506 1.00 11.41 C ATOM 78 O GLY 9 6.879 29.738 1.562 1.00 11.41 O ATOM 79 N SER 10 6.885 30.272 3.775 1.00 12.11 N ATOM 81 CA SER 10 7.580 29.100 4.325 1.00 12.11 C ATOM 82 CB SER 10 8.754 29.515 5.224 1.00 12.11 C ATOM 83 OG SER 10 8.343 30.347 6.290 1.00 12.11 O ATOM 85 C SER 10 6.290 28.822 5.084 1.00 12.11 C ATOM 86 O SER 10 6.251 28.695 6.317 1.00 12.11 O ATOM 87 N SER 11 5.235 28.705 4.267 1.00 13.29 N ATOM 89 CA SER 11 3.866 28.628 4.735 1.00 13.29 C ATOM 90 OG SER 11 2.817 27.728 2.704 1.00 13.29 O ATOM 92 C SER 11 3.485 27.308 5.337 1.00 13.29 C ATOM 93 O SER 11 2.402 27.187 5.931 1.00 13.29 O ATOM 94 CB SER 11 2.934 28.878 3.541 1.00 13.29 C ATOM 95 N TYR 12 4.387 26.334 5.245 1.00 14.04 N ATOM 97 CA TYR 12 4.060 25.068 5.854 1.00 14.04 C ATOM 98 CB TYR 12 4.187 23.934 4.807 1.00 14.04 C ATOM 99 CG TYR 12 5.451 23.919 3.936 1.00 14.04 C ATOM 100 CD1 TYR 12 6.563 23.112 4.279 1.00 14.04 C ATOM 101 CE1 TYR 12 7.723 23.064 3.454 1.00 14.04 C ATOM 102 CD2 TYR 12 5.529 24.679 2.741 1.00 14.04 C ATOM 103 CE2 TYR 12 6.683 24.636 1.912 1.00 14.04 C ATOM 104 CZ TYR 12 7.771 23.827 2.277 1.00 14.04 C ATOM 105 OH TYR 12 8.893 23.781 1.481 1.00 14.04 O ATOM 107 C TYR 12 4.751 24.670 7.144 1.00 14.04 C ATOM 108 O TYR 12 4.127 23.973 7.955 1.00 14.04 O ATOM 109 N VAL 13 5.994 25.126 7.390 1.00 13.49 N ATOM 111 CA VAL 13 6.653 24.661 8.626 1.00 13.49 C ATOM 112 CB VAL 13 7.619 23.480 8.229 1.00 13.49 C ATOM 113 CG1 VAL 13 6.821 22.280 7.788 1.00 13.49 C ATOM 114 CG2 VAL 13 8.615 23.898 7.119 1.00 13.49 C ATOM 115 C VAL 13 7.376 25.328 9.823 1.00 13.49 C ATOM 116 O VAL 13 7.953 24.565 10.621 1.00 13.49 O ATOM 117 N ALA 14 7.352 26.641 10.070 1.00 12.90 N ATOM 119 CA ALA 14 8.051 27.046 11.309 1.00 12.90 C ATOM 120 CB ALA 14 9.012 28.149 11.006 1.00 12.90 C ATOM 121 C ALA 14 7.136 27.482 12.432 1.00 12.90 C ATOM 122 O ALA 14 7.445 27.383 13.626 1.00 12.90 O ATOM 123 N GLU 15 5.978 27.921 11.966 1.00 12.79 N ATOM 125 CA GLU 15 4.845 28.433 12.708 1.00 12.79 C ATOM 126 CB GLU 15 4.617 29.906 12.361 1.00 12.79 C ATOM 127 CG GLU 15 5.672 30.816 12.994 1.00 12.79 C ATOM 128 CD GLU 15 5.460 32.281 12.660 1.00 12.79 C ATOM 129 OE1 GLU 15 6.009 32.745 11.638 1.00 12.79 O ATOM 130 OE2 GLU 15 4.747 32.970 13.420 1.00 12.79 O ATOM 131 C GLU 15 3.593 27.554 12.656 1.00 12.79 C ATOM 132 O GLU 15 2.551 27.935 13.228 1.00 12.79 O ATOM 133 N THR 16 3.754 26.314 12.155 1.00 13.21 N ATOM 135 CA THR 16 2.634 25.400 11.813 1.00 13.21 C ATOM 136 CB THR 16 3.182 23.968 11.499 1.00 13.21 C ATOM 137 OG1 THR 16 4.406 24.077 10.768 1.00 13.21 O ATOM 139 CG2 THR 16 2.195 23.140 10.676 1.00 13.21 C ATOM 140 C THR 16 1.597 25.278 12.934 1.00 13.21 C ATOM 141 O THR 16 0.387 25.317 12.651 1.00 13.21 O ATOM 142 N GLY 17 2.038 25.072 14.167 1.00 14.72 N ATOM 144 CA GLY 17 1.132 25.058 15.304 1.00 14.72 C ATOM 145 C GLY 17 -0.232 25.721 15.157 1.00 14.72 C ATOM 146 O GLY 17 -1.285 25.112 15.348 1.00 14.72 O ATOM 147 N GLN 18 -0.142 26.969 14.692 1.00 12.87 N ATOM 149 CA GLN 18 -1.223 27.921 14.445 1.00 12.87 C ATOM 150 CB GLN 18 -0.784 29.332 14.849 1.00 12.87 C ATOM 151 CG GLN 18 -0.487 29.493 16.319 1.00 12.87 C ATOM 152 CD GLN 18 -0.055 30.903 16.678 1.00 12.87 C ATOM 153 OE1 GLN 18 -0.883 31.750 17.014 1.00 12.87 O ATOM 154 NE2 GLN 18 1.246 31.160 16.608 1.00 12.87 N ATOM 157 C GLN 18 -1.738 27.891 13.003 1.00 12.87 C ATOM 158 O GLN 18 -1.294 28.701 12.186 1.00 12.87 O ATOM 159 N ASN 19 -2.662 26.971 12.688 1.00 13.18 N ATOM 161 CA ASN 19 -3.205 26.806 11.321 1.00 13.18 C ATOM 162 CB ASN 19 -4.168 25.609 11.267 1.00 13.18 C ATOM 163 CG ASN 19 -3.455 24.275 11.235 1.00 13.18 C ATOM 164 OD1 ASN 19 -3.186 23.676 12.279 1.00 13.18 O ATOM 165 ND2 ASN 19 -3.162 23.786 10.033 1.00 13.18 N ATOM 168 C ASN 19 -3.936 28.080 10.874 1.00 13.18 C ATOM 169 O ASN 19 -5.130 28.087 10.551 1.00 13.18 O ATOM 170 N TRP 20 -3.123 29.138 10.787 1.00 11.61 N ATOM 172 CA TRP 20 -3.521 30.482 10.393 1.00 11.61 C ATOM 173 CB TRP 20 -2.723 31.536 11.213 1.00 11.61 C ATOM 174 CG TRP 20 -1.274 31.887 10.767 1.00 11.61 C ATOM 175 CD2 TRP 20 -0.826 33.105 10.133 1.00 11.61 C ATOM 176 CE2 TRP 20 0.584 32.992 9.959 1.00 11.61 C ATOM 177 CE3 TRP 20 -1.473 34.283 9.698 1.00 11.61 C ATOM 178 CD1 TRP 20 -0.143 31.117 10.938 1.00 11.61 C ATOM 179 NE1 TRP 20 0.962 31.774 10.457 1.00 11.61 N ATOM 181 CZ2 TRP 20 1.364 34.014 9.365 1.00 11.61 C ATOM 182 CZ3 TRP 20 -0.694 35.309 9.104 1.00 11.61 C ATOM 183 CH2 TRP 20 0.712 35.159 8.947 1.00 11.61 C ATOM 184 C TRP 20 -3.340 30.619 8.863 1.00 11.61 C ATOM 185 O TRP 20 -3.211 31.737 8.338 1.00 11.61 O ATOM 186 N ALA 21 -3.421 29.471 8.160 1.00 11.50 N ATOM 188 CA ALA 21 -3.292 29.400 6.687 1.00 11.50 C ATOM 189 CB ALA 21 -3.257 27.965 6.244 1.00 11.50 C ATOM 190 C ALA 21 -4.550 30.017 6.140 1.00 11.50 C ATOM 191 O ALA 21 -4.600 30.494 5.000 1.00 11.50 O ATOM 192 N SER 22 -5.537 30.046 7.036 1.00 12.32 N ATOM 194 CA SER 22 -6.848 30.603 6.803 1.00 12.32 C ATOM 195 CB SER 22 -7.809 29.927 7.772 1.00 12.32 C ATOM 196 OG SER 22 -7.445 28.561 7.941 1.00 12.32 O ATOM 198 C SER 22 -6.777 32.116 7.056 1.00 12.32 C ATOM 199 O SER 22 -7.375 32.883 6.312 1.00 12.32 O ATOM 200 N LEU 23 -5.859 32.527 7.944 1.00 10.91 N ATOM 202 CA LEU 23 -5.676 33.946 8.308 1.00 10.91 C ATOM 203 CB LEU 23 -5.132 34.024 9.759 1.00 10.91 C ATOM 204 CG LEU 23 -5.052 35.129 10.858 1.00 10.91 C ATOM 205 CD1 LEU 23 -4.262 36.380 10.434 1.00 10.91 C ATOM 206 CD2 LEU 23 -6.445 35.522 11.372 1.00 10.91 C ATOM 207 C LEU 23 -4.721 34.690 7.359 1.00 10.91 C ATOM 208 O LEU 23 -4.860 35.907 7.170 1.00 10.91 O ATOM 209 N ALA 24 -3.762 33.957 6.780 1.00 9.94 N ATOM 211 CA ALA 24 -2.788 34.535 5.846 1.00 9.94 C ATOM 212 CB ALA 24 -1.488 33.798 5.959 1.00 9.94 C ATOM 213 C ALA 24 -3.239 34.590 4.383 1.00 9.94 C ATOM 214 O ALA 24 -2.724 35.409 3.612 1.00 9.94 O ATOM 215 N ALA 25 -4.239 33.769 4.029 1.00 11.02 N ATOM 217 CA ALA 25 -4.767 33.712 2.658 1.00 11.02 C ATOM 218 CB ALA 25 -5.228 32.309 2.330 1.00 11.02 C ATOM 219 C ALA 25 -5.885 34.721 2.383 1.00 11.02 C ATOM 220 O ALA 25 -6.138 35.060 1.220 1.00 11.02 O ATOM 221 N ASN 26 -6.490 35.239 3.460 1.00 10.85 N ATOM 223 CA ASN 26 -7.569 36.232 3.371 1.00 10.85 C ATOM 224 CB ASN 26 -8.628 35.961 4.452 1.00 10.85 C ATOM 225 CG ASN 26 -9.526 34.780 4.113 1.00 10.85 C ATOM 226 OD1 ASN 26 -9.234 33.638 4.477 1.00 10.85 O ATOM 227 ND2 ASN 26 -10.635 35.053 3.430 1.00 10.85 N ATOM 230 C ASN 26 -7.065 37.677 3.468 1.00 10.85 C ATOM 231 O ASN 26 -7.782 38.614 3.078 1.00 10.85 O ATOM 232 N GLU 27 -5.819 37.845 3.938 1.00 9.61 N ATOM 234 CA GLU 27 -5.211 39.179 4.084 1.00 9.61 C ATOM 235 CG GLU 27 -5.678 39.892 6.478 1.00 9.61 C ATOM 236 CD GLU 27 -5.160 39.972 7.902 1.00 9.61 C ATOM 237 OE1 GLU 27 -4.681 41.054 8.301 1.00 9.61 O ATOM 238 OE2 GLU 27 -5.240 38.957 8.626 1.00 9.61 O ATOM 239 C GLU 27 -4.235 39.721 3.016 1.00 9.61 C ATOM 240 O GLU 27 -3.776 40.872 3.137 1.00 9.61 O ATOM 241 CB GLU 27 -4.645 39.354 5.497 1.00 9.61 C ATOM 242 N LEU 28 -3.990 38.959 1.938 1.00 9.55 N ATOM 244 CA LEU 28 -3.080 39.425 0.872 1.00 9.55 C ATOM 245 CB LEU 28 -1.885 38.442 0.658 1.00 9.55 C ATOM 246 CG LEU 28 -1.689 37.074 -0.060 1.00 9.55 C ATOM 247 CD1 LEU 28 -2.590 35.976 0.511 1.00 9.55 C ATOM 248 CD2 LEU 28 -1.834 37.148 -1.590 1.00 9.55 C ATOM 249 C LEU 28 -3.792 39.778 -0.451 1.00 9.55 C ATOM 250 O LEU 28 -3.126 40.060 -1.461 1.00 9.55 O ATOM 251 N ARG 29 -5.132 39.812 -0.425 1.00 10.24 N ATOM 253 CA ARG 29 -5.952 40.178 -1.595 1.00 10.24 C ATOM 254 CB ARG 29 -7.397 39.689 -1.426 1.00 10.24 C ATOM 255 CG ARG 29 -8.061 39.205 -2.721 1.00 10.24 C ATOM 256 CD ARG 29 -9.496 38.731 -2.494 1.00 10.24 C ATOM 257 NE ARG 29 -9.570 37.482 -1.728 1.00 10.24 N ATOM 259 CZ ARG 29 -10.696 36.854 -1.390 1.00 10.24 C ATOM 260 NH1 ARG 29 -10.632 35.727 -0.693 1.00 10.24 N ATOM 263 NH2 ARG 29 -11.884 37.334 -1.741 1.00 10.24 N ATOM 266 C ARG 29 -5.856 41.717 -1.657 1.00 10.24 C ATOM 267 O ARG 29 -6.559 42.440 -0.933 1.00 10.24 O ATOM 268 N VAL 30 -4.986 42.195 -2.553 1.00 11.23 N ATOM 270 CA VAL 30 -4.688 43.625 -2.687 1.00 11.23 C ATOM 271 CB VAL 30 -3.136 43.846 -2.991 1.00 11.23 C ATOM 272 CG1 VAL 30 -2.684 43.024 -4.190 1.00 11.23 C ATOM 273 CG2 VAL 30 -2.771 45.335 -3.143 1.00 11.23 C ATOM 274 C VAL 30 -5.669 44.523 -3.481 1.00 11.23 C ATOM 275 O VAL 30 -5.669 44.584 -4.716 1.00 11.23 O ATOM 276 N THR 31 -6.574 45.100 -2.679 1.00 11.81 N ATOM 278 CA THR 31 -7.637 46.061 -3.014 1.00 11.81 C ATOM 279 CB THR 31 -9.062 45.519 -2.705 1.00 11.81 C ATOM 280 OG1 THR 31 -9.038 44.737 -1.503 1.00 11.81 O ATOM 282 CG2 THR 31 -9.574 44.684 -3.857 1.00 11.81 C ATOM 283 C THR 31 -7.303 47.227 -2.066 1.00 11.81 C ATOM 284 O THR 31 -6.909 46.981 -0.920 1.00 11.81 O ATOM 285 N GLU 32 -7.435 48.481 -2.503 1.00 11.69 N ATOM 287 CA GLU 32 -7.054 49.596 -1.621 1.00 11.69 C ATOM 288 CB GLU 32 -6.623 50.816 -2.424 1.00 11.69 C ATOM 289 CG GLU 32 -5.241 50.655 -3.036 1.00 11.69 C ATOM 290 CD GLU 32 -4.809 51.870 -3.837 1.00 11.69 C ATOM 291 OE1 GLU 32 -5.087 51.913 -5.054 1.00 11.69 O ATOM 292 OE2 GLU 32 -4.186 52.781 -3.251 1.00 11.69 O ATOM 293 C GLU 32 -8.046 49.940 -0.497 1.00 11.69 C ATOM 294 O GLU 32 -9.024 50.680 -0.648 1.00 11.69 O ATOM 295 N ARG 33 -7.797 49.181 0.572 1.00 10.49 N ATOM 297 CA ARG 33 -8.441 49.133 1.886 1.00 10.49 C ATOM 298 CB ARG 33 -8.706 47.680 2.297 1.00 10.49 C ATOM 299 CG ARG 33 -10.191 47.314 2.318 1.00 10.49 C ATOM 300 CD ARG 33 -10.423 45.862 2.731 1.00 10.49 C ATOM 301 NE ARG 33 -10.114 45.614 4.144 1.00 10.49 N ATOM 303 CZ ARG 33 -10.228 44.438 4.760 1.00 10.49 C ATOM 304 NH1 ARG 33 -10.650 43.357 4.110 1.00 10.49 N ATOM 307 NH2 ARG 33 -9.917 44.340 6.046 1.00 10.49 N ATOM 310 C ARG 33 -7.511 49.838 2.892 1.00 10.49 C ATOM 311 O ARG 33 -6.390 50.200 2.507 1.00 10.49 O ATOM 312 N PRO 34 -7.987 50.169 4.135 1.00 9.87 N ATOM 313 CD PRO 34 -9.366 50.035 4.652 1.00 9.87 C ATOM 314 CA PRO 34 -7.192 50.838 5.181 1.00 9.87 C ATOM 315 CB PRO 34 -8.024 50.597 6.454 1.00 9.87 C ATOM 316 CG PRO 34 -9.109 49.600 6.043 1.00 9.87 C ATOM 317 C PRO 34 -5.746 50.327 5.343 1.00 9.87 C ATOM 318 O PRO 34 -5.338 49.394 4.656 1.00 9.87 O ATOM 319 N PHE 35 -5.012 50.882 6.304 1.00 9.32 N ATOM 321 CA PHE 35 -3.586 50.613 6.503 1.00 9.32 C ATOM 322 CB PHE 35 -3.024 51.582 7.554 1.00 9.32 C ATOM 323 CG PHE 35 -3.886 51.730 8.808 1.00 9.32 C ATOM 324 CD1 PHE 35 -4.892 52.724 8.883 1.00 9.32 C ATOM 325 CD2 PHE 35 -3.665 50.911 9.943 1.00 9.32 C ATOM 326 CE1 PHE 35 -5.665 52.903 10.064 1.00 9.32 C ATOM 327 CE2 PHE 35 -4.430 51.076 11.131 1.00 9.32 C ATOM 328 CZ PHE 35 -5.433 52.076 11.190 1.00 9.32 C ATOM 329 C PHE 35 -3.308 49.170 6.909 1.00 9.32 C ATOM 330 O PHE 35 -3.917 48.608 7.832 1.00 9.32 O ATOM 331 N TRP 36 -2.371 48.606 6.143 1.00 8.35 N ATOM 333 CA TRP 36 -1.956 47.208 6.170 1.00 8.35 C ATOM 334 CB TRP 36 -1.060 46.941 4.939 1.00 8.35 C ATOM 335 CG TRP 36 -0.211 48.141 4.404 1.00 8.35 C ATOM 336 CD2 TRP 36 1.139 48.500 4.774 1.00 8.35 C ATOM 337 CE2 TRP 36 1.506 49.622 3.977 1.00 8.35 C ATOM 338 CE3 TRP 36 2.077 47.984 5.696 1.00 8.35 C ATOM 339 CD1 TRP 36 -0.585 49.043 3.433 1.00 8.35 C ATOM 340 NE1 TRP 36 0.436 49.923 3.177 1.00 8.35 N ATOM 342 CZ2 TRP 36 2.776 50.241 4.072 1.00 8.35 C ATOM 343 CZ3 TRP 36 3.350 48.602 5.793 1.00 8.35 C ATOM 344 CH2 TRP 36 3.680 49.721 4.980 1.00 8.35 C ATOM 345 C TRP 36 -1.268 46.754 7.459 1.00 8.35 C ATOM 346 O TRP 36 -0.151 47.161 7.810 1.00 8.35 O ATOM 347 N ILE 37 -2.067 45.954 8.175 1.00 8.30 N ATOM 349 CA ILE 37 -1.794 45.345 9.482 1.00 8.30 C ATOM 350 CB ILE 37 -3.131 45.171 10.296 1.00 8.30 C ATOM 351 CG2 ILE 37 -3.640 46.549 10.759 1.00 8.30 C ATOM 352 CG1 ILE 37 -4.191 44.388 9.479 1.00 8.30 C ATOM 353 CD1 ILE 37 -5.133 43.503 10.308 1.00 8.30 C ATOM 354 C ILE 37 -1.032 44.003 9.451 1.00 8.30 C ATOM 355 O ILE 37 -0.318 43.684 10.404 1.00 8.30 O ATOM 356 N SER 38 -1.137 43.278 8.328 1.00 8.50 N ATOM 358 CA SER 38 -0.523 41.946 8.130 1.00 8.50 C ATOM 359 CB SER 38 -1.017 41.315 6.830 1.00 8.50 C ATOM 360 OG SER 38 -2.378 40.967 6.922 1.00 8.50 O ATOM 362 C SER 38 1.000 41.865 8.139 1.00 8.50 C ATOM 363 O SER 38 1.559 40.970 8.776 1.00 8.50 O ATOM 364 N SER 39 1.649 42.860 7.528 1.00 7.23 N ATOM 366 CA SER 39 3.104 42.940 7.390 1.00 7.23 C ATOM 367 CB SER 39 3.487 43.807 6.182 1.00 7.23 C ATOM 368 OG SER 39 2.918 45.089 6.268 1.00 7.23 O ATOM 370 C SER 39 3.953 43.227 8.666 1.00 7.23 C ATOM 371 O SER 39 5.128 43.610 8.573 1.00 7.23 O ATOM 372 N PHE 40 3.327 43.094 9.847 1.00 7.57 N ATOM 374 CA PHE 40 3.966 43.278 11.180 1.00 7.57 C ATOM 375 CB PHE 40 2.857 43.384 12.272 1.00 7.57 C ATOM 376 CG PHE 40 2.119 42.068 12.600 1.00 7.57 C ATOM 377 CD1 PHE 40 2.323 41.432 13.846 1.00 7.57 C ATOM 378 CD2 PHE 40 1.195 41.488 11.700 1.00 7.57 C ATOM 379 CE1 PHE 40 1.624 40.243 14.194 1.00 7.57 C ATOM 380 CE2 PHE 40 0.487 40.300 12.030 1.00 7.57 C ATOM 381 CZ PHE 40 0.702 39.676 13.283 1.00 7.57 C ATOM 382 C PHE 40 4.904 42.068 11.472 1.00 7.57 C ATOM 383 O PHE 40 5.035 41.612 12.615 1.00 7.57 O ATOM 384 N ILE 41 5.664 41.677 10.448 1.00 6.53 N ATOM 386 CA ILE 41 6.515 40.484 10.474 1.00 6.53 C ATOM 387 CB ILE 41 6.663 39.958 8.982 1.00 6.53 C ATOM 388 CG2 ILE 41 7.840 40.653 8.238 1.00 6.53 C ATOM 389 CG1 ILE 41 6.680 38.426 8.965 1.00 6.53 C ATOM 390 CD1 ILE 41 6.062 37.776 7.718 1.00 6.53 C ATOM 391 C ILE 41 7.818 40.385 11.323 1.00 6.53 C ATOM 392 O ILE 41 8.660 39.512 11.060 1.00 6.53 O ATOM 393 N GLY 42 7.945 41.197 12.379 1.00 6.64 N ATOM 395 CA GLY 42 9.138 41.129 13.226 1.00 6.64 C ATOM 396 C GLY 42 10.402 41.403 12.441 1.00 6.64 C ATOM 397 O GLY 42 11.419 40.715 12.546 1.00 6.64 O ATOM 398 N ARG 43 10.234 42.409 11.598 1.00 4.83 N ATOM 400 CA ARG 43 11.161 42.932 10.625 1.00 4.83 C ATOM 401 CB ARG 43 10.492 43.079 9.231 1.00 4.83 C ATOM 402 CG ARG 43 9.723 44.376 8.915 1.00 4.83 C ATOM 403 CD ARG 43 8.217 44.353 9.277 1.00 4.83 C ATOM 404 NE ARG 43 7.985 44.335 10.725 1.00 4.83 N ATOM 406 CZ ARG 43 7.209 45.193 11.391 1.00 4.83 C ATOM 407 NH1 ARG 43 7.080 45.071 12.705 1.00 4.83 N ATOM 410 NH2 ARG 43 6.561 46.168 10.762 1.00 4.83 N ATOM 413 C ARG 43 12.323 43.908 10.855 1.00 4.83 C ATOM 414 O ARG 43 12.778 44.192 11.960 1.00 4.83 O ATOM 415 N SER 44 12.628 44.467 9.699 1.00 3.81 N ATOM 417 CA SER 44 13.643 45.330 9.179 1.00 3.81 C ATOM 418 CB SER 44 13.473 45.275 7.660 1.00 3.81 C ATOM 419 OG SER 44 12.243 45.865 7.279 1.00 3.81 O ATOM 421 C SER 44 13.953 46.768 9.553 1.00 3.81 C ATOM 422 O SER 44 13.612 47.293 10.614 1.00 3.81 O ATOM 423 N LYS 45 14.386 47.382 8.460 1.00 4.50 N ATOM 425 CA LYS 45 14.975 48.659 8.162 1.00 4.50 C ATOM 426 CG LYS 45 14.094 48.388 5.713 1.00 4.50 C ATOM 427 CD LYS 45 14.485 48.607 4.259 1.00 4.50 C ATOM 428 CE LYS 45 13.304 48.392 3.329 1.00 4.50 C ATOM 429 NZ LYS 45 13.675 48.603 1.903 1.00 4.50 N ATOM 433 C LYS 45 14.402 49.963 8.611 1.00 4.50 C ATOM 434 O LYS 45 13.231 50.309 8.390 1.00 4.50 O ATOM 435 CB LYS 45 15.269 48.732 6.656 1.00 4.50 C TER END