####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS498_3-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS498_3-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 19 - 39 4.90 13.44 LCS_AVERAGE: 44.52 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 31 - 40 2.00 11.83 LCS_AVERAGE: 18.65 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 20 - 27 0.74 16.61 LCS_AVERAGE: 11.98 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 5 6 10 3 8 8 8 10 10 10 11 12 15 17 17 22 22 22 23 25 25 26 27 LCS_GDT V 3 V 3 5 6 12 3 3 5 5 10 10 11 13 13 15 17 18 22 22 22 24 26 28 29 31 LCS_GDT Q 4 Q 4 5 6 12 3 4 5 5 6 6 11 13 13 15 16 18 20 21 24 25 27 29 29 31 LCS_GDT G 5 G 5 5 6 19 3 4 5 5 6 6 7 8 10 14 16 18 20 22 24 25 27 29 29 31 LCS_GDT P 6 P 6 5 6 20 3 5 5 6 6 6 7 12 14 15 17 18 22 23 24 26 27 29 30 33 LCS_GDT W 7 W 7 5 6 20 3 5 5 6 6 6 9 12 14 15 18 20 22 23 24 26 27 29 31 35 LCS_GDT V 8 V 8 5 5 20 3 5 5 7 10 12 13 15 16 17 18 20 22 23 25 27 28 30 31 35 LCS_GDT G 9 G 9 5 5 20 3 5 5 7 8 12 13 15 16 17 18 20 22 23 25 27 28 30 31 35 LCS_GDT S 10 S 10 5 5 20 3 5 6 8 10 12 13 15 16 17 18 20 22 23 25 27 28 30 31 35 LCS_GDT S 11 S 11 4 4 20 3 3 4 7 8 9 10 12 15 16 18 20 22 23 25 26 27 30 31 35 LCS_GDT Y 12 Y 12 4 9 20 3 3 4 4 7 9 10 12 13 13 16 19 21 23 25 26 27 30 31 35 LCS_GDT V 13 V 13 6 9 20 3 4 5 6 8 10 12 12 15 16 18 20 22 23 25 27 28 30 31 35 LCS_GDT A 14 A 14 6 9 20 4 5 5 7 8 9 10 12 15 16 18 20 22 23 25 27 28 30 31 35 LCS_GDT E 15 E 15 6 9 20 4 6 6 7 8 9 10 12 15 15 18 19 22 23 25 26 27 29 31 35 LCS_GDT T 16 T 16 6 9 20 4 6 6 7 8 9 10 12 15 16 18 20 22 23 25 26 27 29 31 35 LCS_GDT G 17 G 17 6 9 20 4 6 6 7 8 10 12 12 15 16 18 20 22 23 25 27 28 30 31 35 LCS_GDT Q 18 Q 18 6 9 20 4 6 6 7 8 10 12 12 15 16 18 20 22 23 25 27 28 30 31 35 LCS_GDT N 19 N 19 6 9 21 3 6 6 7 8 10 12 13 15 16 18 20 22 23 25 27 28 30 31 35 LCS_GDT W 20 W 20 8 9 21 6 8 8 8 10 10 12 13 15 16 18 20 22 23 25 27 28 30 31 35 LCS_GDT A 21 A 21 8 9 21 6 8 8 8 10 10 12 13 15 16 18 20 22 23 25 26 28 30 31 35 LCS_GDT S 22 S 22 8 9 21 6 8 8 8 10 10 12 12 15 16 18 20 22 23 25 26 27 29 31 35 LCS_GDT L 23 L 23 8 9 21 6 8 8 8 10 10 11 13 14 16 18 20 22 23 25 27 28 30 31 35 LCS_GDT A 24 A 24 8 9 21 6 8 8 8 10 10 11 13 15 16 18 20 22 23 25 27 28 30 31 35 LCS_GDT A 25 A 25 8 9 21 6 8 8 8 10 10 11 13 13 15 18 20 20 23 25 27 28 30 31 35 LCS_GDT N 26 N 26 8 9 21 4 8 8 8 10 10 11 13 13 15 18 19 22 23 25 27 28 30 31 35 LCS_GDT E 27 E 27 8 9 21 4 7 8 8 10 11 11 14 15 17 17 18 20 22 24 27 28 30 31 35 LCS_GDT L 28 L 28 4 9 21 4 4 5 6 8 11 11 14 15 17 17 18 20 22 24 27 28 30 31 35 LCS_GDT R 29 R 29 4 9 21 4 4 5 7 9 11 13 15 16 17 17 18 20 22 24 27 28 30 30 35 LCS_GDT V 30 V 30 4 9 21 4 4 5 8 10 12 13 15 16 17 17 19 22 22 24 27 28 30 31 35 LCS_GDT T 31 T 31 4 10 21 4 4 5 8 10 12 13 15 16 17 17 19 22 22 24 27 28 30 31 35 LCS_GDT E 32 E 32 4 10 21 4 4 5 6 7 11 13 15 16 17 17 19 22 22 24 27 28 30 31 35 LCS_GDT R 33 R 33 3 10 21 3 4 6 8 10 12 13 15 16 17 17 19 22 22 24 27 28 30 31 35 LCS_GDT P 34 P 34 3 10 21 2 4 6 8 10 12 13 15 16 17 17 19 22 22 24 27 28 30 31 35 LCS_GDT F 35 F 35 3 10 21 3 3 4 7 10 12 13 15 16 17 17 19 22 22 25 27 28 30 31 35 LCS_GDT W 36 W 36 5 10 21 3 5 6 8 10 12 13 15 16 17 18 20 22 23 25 27 28 30 31 35 LCS_GDT I 37 I 37 5 10 21 3 5 6 8 10 12 13 15 16 17 18 20 22 23 25 27 28 30 31 35 LCS_GDT S 38 S 38 5 10 21 3 5 6 8 10 12 13 15 16 17 18 20 22 23 25 27 28 30 31 35 LCS_GDT S 39 S 39 5 10 21 3 5 6 8 10 12 13 15 16 17 18 20 22 23 25 27 28 30 31 35 LCS_GDT F 40 F 40 5 10 18 3 5 6 8 10 12 13 15 16 17 18 20 22 23 25 27 28 30 31 35 LCS_GDT I 41 I 41 4 7 18 3 4 4 6 8 12 13 15 16 16 17 19 22 22 24 25 27 29 30 35 LCS_GDT G 42 G 42 4 7 18 3 4 4 6 8 10 12 14 15 16 17 19 22 22 24 25 27 29 29 31 LCS_GDT R 43 R 43 4 7 18 3 4 4 6 8 10 12 14 16 16 17 19 22 22 24 25 27 29 29 31 LCS_GDT S 44 S 44 4 7 18 3 4 4 6 8 10 11 13 13 15 17 19 22 22 24 25 27 29 29 31 LCS_GDT K 45 K 45 3 7 18 3 3 4 6 8 10 11 12 13 14 17 19 22 22 22 23 25 25 26 27 LCS_AVERAGE LCS_A: 25.05 ( 11.98 18.65 44.52 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 8 8 8 10 12 13 15 16 17 18 20 22 23 25 27 28 30 31 35 GDT PERCENT_AT 13.64 18.18 18.18 18.18 22.73 27.27 29.55 34.09 36.36 38.64 40.91 45.45 50.00 52.27 56.82 61.36 63.64 68.18 70.45 79.55 GDT RMS_LOCAL 0.28 0.55 0.55 0.55 1.35 1.93 2.11 2.47 2.66 3.22 3.80 4.28 4.43 4.56 5.20 6.06 6.18 6.51 6.65 7.26 GDT RMS_ALL_AT 16.00 15.43 15.43 15.43 15.29 11.24 11.38 11.60 11.42 10.94 13.05 12.45 12.81 12.85 12.05 11.09 11.11 10.88 11.15 10.70 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 11.989 0 0.057 0.079 13.985 0.000 0.000 - LGA V 3 V 3 10.146 0 0.200 1.257 12.559 0.000 0.000 11.011 LGA Q 4 Q 4 14.618 0 0.185 1.106 21.562 0.000 0.000 20.734 LGA G 5 G 5 14.274 0 0.070 0.070 15.151 0.000 0.000 - LGA P 6 P 6 13.352 0 0.543 0.520 16.588 0.000 0.000 16.588 LGA W 7 W 7 9.148 0 0.217 1.236 15.516 0.000 0.000 13.158 LGA V 8 V 8 3.070 0 0.651 0.839 5.183 33.636 25.974 3.172 LGA G 9 G 9 3.167 0 0.548 0.548 4.295 26.818 26.818 - LGA S 10 S 10 1.726 0 0.062 0.153 4.304 29.545 31.212 3.092 LGA S 11 S 11 7.049 0 0.632 0.890 10.279 0.455 0.303 10.279 LGA Y 12 Y 12 10.347 0 0.511 1.301 13.435 0.000 0.000 13.309 LGA V 13 V 13 12.550 0 0.522 1.184 13.983 0.000 0.000 13.260 LGA A 14 A 14 12.525 0 0.191 0.182 15.948 0.000 0.000 - LGA E 15 E 15 16.866 0 0.053 1.384 20.648 0.000 0.000 19.494 LGA T 16 T 16 20.370 0 0.185 0.176 22.443 0.000 0.000 18.303 LGA G 17 G 17 21.485 0 0.096 0.096 22.697 0.000 0.000 - LGA Q 18 Q 18 20.364 0 0.335 1.287 24.302 0.000 0.000 24.302 LGA N 19 N 19 19.529 0 0.618 1.197 21.862 0.000 0.000 21.700 LGA W 20 W 20 17.826 0 0.600 1.254 21.342 0.000 0.000 20.776 LGA A 21 A 21 17.539 0 0.069 0.067 19.134 0.000 0.000 - LGA S 22 S 22 20.395 0 0.052 0.639 24.776 0.000 0.000 24.776 LGA L 23 L 23 17.218 0 0.036 0.911 21.625 0.000 0.000 20.268 LGA A 24 A 24 11.841 0 0.131 0.136 13.917 0.000 0.000 - LGA A 25 A 25 14.112 0 0.159 0.169 16.382 0.000 0.000 - LGA N 26 N 26 15.172 0 0.388 1.221 18.911 0.000 0.000 15.424 LGA E 27 E 27 11.481 0 0.395 1.393 14.189 0.000 0.000 14.189 LGA L 28 L 28 9.097 0 0.508 1.071 10.548 0.000 0.000 8.043 LGA R 29 R 29 5.386 0 0.464 1.051 11.501 5.455 1.983 11.107 LGA V 30 V 30 2.093 0 0.144 1.055 3.675 30.455 30.130 3.675 LGA T 31 T 31 1.703 0 0.735 0.613 3.649 58.636 45.974 2.274 LGA E 32 E 32 3.516 0 0.332 0.805 9.605 21.818 9.697 9.248 LGA R 33 R 33 1.104 0 0.095 1.296 12.778 43.636 17.025 12.778 LGA P 34 P 34 2.092 0 0.375 0.590 4.495 38.182 24.935 4.495 LGA F 35 F 35 2.875 0 0.612 1.133 10.203 31.364 11.405 10.203 LGA W 36 W 36 1.896 0 0.323 1.161 9.542 58.182 22.208 9.461 LGA I 37 I 37 2.508 0 0.131 1.583 7.710 32.727 19.318 7.710 LGA S 38 S 38 1.698 0 0.060 0.062 2.541 45.000 49.394 1.392 LGA S 39 S 39 2.130 0 0.181 0.680 4.448 44.545 35.152 4.448 LGA F 40 F 40 2.082 0 0.503 1.203 10.385 45.000 18.843 10.385 LGA I 41 I 41 3.766 0 0.599 1.709 10.456 12.273 6.136 10.456 LGA G 42 G 42 7.599 0 0.120 0.120 9.168 0.000 0.000 - LGA R 43 R 43 6.556 0 0.561 1.387 8.688 0.000 13.388 0.412 LGA S 44 S 44 9.897 0 0.062 0.582 14.039 0.000 0.000 14.039 LGA K 45 K 45 10.988 0 0.715 0.873 15.522 0.000 0.000 9.773 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 9.882 9.777 11.094 12.676 8.861 7.481 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 15 2.47 32.955 29.014 0.583 LGA_LOCAL RMSD: 2.473 Number of atoms: 15 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 11.596 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 9.882 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.902635 * X + 0.415050 * Y + -0.113951 * Z + -21.744228 Y_new = -0.287955 * X + -0.779112 * Y + -0.556837 * Z + 26.918045 Z_new = -0.319895 * X + -0.469807 * Y + 0.822769 * Z + 2.672609 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.832783 0.325619 -0.518829 [DEG: -162.3065 18.6566 -29.7267 ] ZXZ: -0.201853 0.604531 -2.543796 [DEG: -11.5653 34.6371 -145.7488 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS498_3-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS498_3-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 15 2.47 29.014 9.88 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS498_3-D1 PFRMAT TS TARGET T0953s2 MODEL 3 PARENT N/A ATOM 12 N ALA 2 3.203 36.182 23.231 1.00 14.99 N ATOM 14 CA ALA 2 3.383 34.757 22.911 1.00 14.99 C ATOM 15 CB ALA 2 2.322 33.909 23.613 1.00 14.99 C ATOM 16 C ALA 2 3.214 34.683 21.382 1.00 14.99 C ATOM 17 O ALA 2 2.384 35.421 20.833 1.00 14.99 O ATOM 18 N VAL 3 3.974 33.810 20.701 1.00 13.24 N ATOM 20 CA VAL 3 3.925 33.719 19.230 1.00 13.24 C ATOM 21 CB VAL 3 5.430 33.803 18.641 1.00 13.24 C ATOM 22 CG1 VAL 3 6.345 32.715 19.248 1.00 13.24 C ATOM 23 CG2 VAL 3 5.469 33.789 17.105 1.00 13.24 C ATOM 24 C VAL 3 3.066 32.612 18.541 1.00 13.24 C ATOM 25 O VAL 3 3.462 31.440 18.474 1.00 13.24 O ATOM 26 N GLN 4 1.849 33.019 18.131 1.00 12.81 N ATOM 28 CA GLN 4 0.870 32.215 17.358 1.00 12.81 C ATOM 29 CB GLN 4 -0.218 31.606 18.268 1.00 12.81 C ATOM 30 CG GLN 4 -0.953 30.389 17.689 1.00 12.81 C ATOM 31 CD GLN 4 -2.007 29.842 18.632 1.00 12.81 C ATOM 32 OE1 GLN 4 -1.729 28.966 19.452 1.00 12.81 O ATOM 33 NE2 GLN 4 -3.228 30.357 18.522 1.00 12.81 N ATOM 36 C GLN 4 0.281 33.254 16.396 1.00 12.81 C ATOM 37 O GLN 4 -0.564 34.065 16.805 1.00 12.81 O ATOM 38 N GLY 5 0.748 33.275 15.154 1.00 11.69 N ATOM 40 CA GLY 5 0.227 34.242 14.214 1.00 11.69 C ATOM 41 C GLY 5 0.240 33.795 12.782 1.00 11.69 C ATOM 42 O GLY 5 0.626 32.652 12.512 1.00 11.69 O ATOM 43 N PRO 6 -0.192 34.669 11.834 1.00 10.96 N ATOM 44 CD PRO 6 -0.818 35.993 12.049 1.00 10.96 C ATOM 45 CA PRO 6 -0.211 34.344 10.407 1.00 10.96 C ATOM 46 CB PRO 6 -0.875 35.580 9.790 1.00 10.96 C ATOM 47 CG PRO 6 -1.749 36.098 10.885 1.00 10.96 C ATOM 48 C PRO 6 1.245 34.161 9.940 1.00 10.96 C ATOM 49 O PRO 6 1.941 35.133 9.612 1.00 10.96 O ATOM 50 N TRP 7 1.708 32.906 10.022 1.00 10.18 N ATOM 52 CA TRP 7 3.067 32.529 9.628 1.00 10.18 C ATOM 53 CB TRP 7 3.507 31.198 10.309 1.00 10.18 C ATOM 54 CG TRP 7 2.683 29.910 9.992 1.00 10.18 C ATOM 55 CD2 TRP 7 3.043 28.838 9.094 1.00 10.18 C ATOM 56 CE2 TRP 7 2.007 27.862 9.172 1.00 10.18 C ATOM 57 CE3 TRP 7 4.139 28.602 8.232 1.00 10.18 C ATOM 58 CD1 TRP 7 1.480 29.541 10.554 1.00 10.18 C ATOM 59 NE1 TRP 7 1.078 28.322 10.065 1.00 10.18 N ATOM 61 CZ2 TRP 7 2.031 26.664 8.417 1.00 10.18 C ATOM 62 CZ3 TRP 7 4.164 27.403 7.476 1.00 10.18 C ATOM 63 CH2 TRP 7 3.111 26.452 7.580 1.00 10.18 C ATOM 64 C TRP 7 3.009 32.437 8.096 1.00 10.18 C ATOM 65 O TRP 7 2.556 31.439 7.519 1.00 10.18 O ATOM 66 N VAL 8 3.388 33.551 7.463 1.00 10.40 N ATOM 68 CA VAL 8 3.366 33.693 6.005 1.00 10.40 C ATOM 69 CB VAL 8 2.896 35.104 5.508 1.00 10.40 C ATOM 70 CG1 VAL 8 2.198 34.965 4.152 1.00 10.40 C ATOM 71 CG2 VAL 8 1.944 35.761 6.507 1.00 10.40 C ATOM 72 C VAL 8 4.722 33.328 5.421 1.00 10.40 C ATOM 73 O VAL 8 5.738 33.356 6.126 1.00 10.40 O ATOM 74 N GLY 9 4.710 33.048 4.114 1.00 13.09 N ATOM 76 CA GLY 9 5.869 32.584 3.374 1.00 13.09 C ATOM 77 C GLY 9 6.553 31.433 4.104 1.00 13.09 C ATOM 78 O GLY 9 7.460 31.621 4.923 1.00 13.09 O ATOM 79 N SER 10 6.073 30.236 3.756 1.00 14.13 N ATOM 81 CA SER 10 6.463 28.926 4.298 1.00 14.13 C ATOM 82 CB SER 10 5.326 27.949 4.047 1.00 14.13 C ATOM 83 OG SER 10 5.068 27.851 2.653 1.00 14.13 O ATOM 85 C SER 10 7.702 28.334 3.652 1.00 14.13 C ATOM 86 O SER 10 8.307 27.392 4.186 1.00 14.13 O ATOM 87 N SER 11 8.097 28.945 2.534 1.00 17.63 N ATOM 89 CA SER 11 9.255 28.533 1.759 1.00 17.63 C ATOM 90 OG SER 11 8.251 28.442 -0.450 1.00 17.63 O ATOM 92 C SER 11 10.352 29.115 2.636 1.00 17.63 C ATOM 93 O SER 11 10.523 30.333 2.728 1.00 17.63 O ATOM 94 CB SER 11 9.226 29.107 0.338 1.00 17.63 C ATOM 95 N TYR 12 10.970 28.191 3.383 1.00 16.16 N ATOM 97 CA TYR 12 12.015 28.393 4.399 1.00 16.16 C ATOM 98 CB TYR 12 12.475 27.040 4.984 1.00 16.16 C ATOM 99 CG TYR 12 11.409 26.218 5.712 1.00 16.16 C ATOM 100 CD1 TYR 12 11.200 26.360 7.108 1.00 16.16 C ATOM 101 CE1 TYR 12 10.236 25.571 7.795 1.00 16.16 C ATOM 102 CD2 TYR 12 10.624 25.261 5.022 1.00 16.16 C ATOM 103 CE2 TYR 12 9.658 24.468 5.702 1.00 16.16 C ATOM 104 CZ TYR 12 9.472 24.632 7.084 1.00 16.16 C ATOM 105 OH TYR 12 8.539 23.868 7.748 1.00 16.16 O ATOM 107 C TYR 12 13.141 29.149 3.710 1.00 16.16 C ATOM 108 O TYR 12 14.191 28.608 3.350 1.00 16.16 O ATOM 109 N VAL 13 12.819 30.434 3.501 1.00 15.20 N ATOM 111 CA VAL 13 13.604 31.422 2.764 1.00 15.20 C ATOM 112 CB VAL 13 12.769 32.748 2.489 1.00 15.20 C ATOM 113 CG1 VAL 13 11.968 32.629 1.232 1.00 15.20 C ATOM 114 CG2 VAL 13 11.846 33.116 3.674 1.00 15.20 C ATOM 115 C VAL 13 14.910 31.798 3.476 1.00 15.20 C ATOM 116 O VAL 13 15.069 32.868 4.083 1.00 15.20 O ATOM 117 N ALA 14 15.779 30.779 3.472 1.00 16.36 N ATOM 119 CA ALA 14 17.149 30.808 3.974 1.00 16.36 C ATOM 120 CB ALA 14 17.547 29.404 4.386 1.00 16.36 C ATOM 121 C ALA 14 17.944 31.241 2.728 1.00 16.36 C ATOM 122 O ALA 14 19.157 31.445 2.785 1.00 16.36 O ATOM 123 N GLU 15 17.191 31.435 1.636 1.00 18.28 N ATOM 125 CA GLU 15 17.678 31.812 0.303 1.00 18.28 C ATOM 126 CB GLU 15 16.906 31.027 -0.774 1.00 18.28 C ATOM 127 CG GLU 15 16.949 29.501 -0.640 1.00 18.28 C ATOM 128 CD GLU 15 16.168 28.794 -1.732 1.00 18.28 C ATOM 129 OE1 GLU 15 14.960 28.544 -1.534 1.00 18.28 O ATOM 130 OE2 GLU 15 16.762 28.486 -2.787 1.00 18.28 O ATOM 131 C GLU 15 17.661 33.304 -0.066 1.00 18.28 C ATOM 132 O GLU 15 18.649 33.807 -0.592 1.00 18.28 O ATOM 133 N THR 16 16.544 33.996 0.208 1.00 16.62 N ATOM 135 CA THR 16 16.360 35.422 -0.143 1.00 16.62 C ATOM 136 CB THR 16 14.919 35.678 -0.690 1.00 16.62 C ATOM 137 OG1 THR 16 13.951 35.229 0.269 1.00 16.62 O ATOM 139 CG2 THR 16 14.702 34.945 -2.001 1.00 16.62 C ATOM 140 C THR 16 16.710 36.449 0.950 1.00 16.62 C ATOM 141 O THR 16 16.269 37.607 0.898 1.00 16.62 O ATOM 142 N GLY 17 17.540 36.024 1.909 1.00 14.29 N ATOM 144 CA GLY 17 17.994 36.862 3.019 1.00 14.29 C ATOM 145 C GLY 17 17.006 37.603 3.901 1.00 14.29 C ATOM 146 O GLY 17 17.402 38.131 4.945 1.00 14.29 O ATOM 147 N GLN 18 15.729 37.618 3.501 1.00 12.61 N ATOM 149 CA GLN 18 14.654 38.265 4.250 1.00 12.61 C ATOM 150 CB GLN 18 13.445 38.570 3.360 1.00 12.61 C ATOM 151 CG GLN 18 13.683 39.700 2.374 1.00 12.61 C ATOM 152 CD GLN 18 12.472 39.982 1.505 1.00 12.61 C ATOM 153 OE1 GLN 18 12.325 39.414 0.423 1.00 12.61 O ATOM 154 NE2 GLN 18 11.596 40.864 1.976 1.00 12.61 N ATOM 157 C GLN 18 14.322 37.348 5.442 1.00 12.61 C ATOM 158 O GLN 18 13.235 36.768 5.549 1.00 12.61 O ATOM 159 N ASN 19 15.262 37.386 6.395 1.00 10.81 N ATOM 161 CA ASN 19 15.318 36.624 7.652 1.00 10.81 C ATOM 162 CB ASN 19 16.655 36.880 8.381 1.00 10.81 C ATOM 163 CG ASN 19 17.167 35.655 9.136 1.00 10.81 C ATOM 164 OD1 ASN 19 16.860 35.464 10.315 1.00 10.81 O ATOM 165 ND2 ASN 19 17.964 34.831 8.462 1.00 10.81 N ATOM 168 C ASN 19 14.101 37.099 8.461 1.00 10.81 C ATOM 169 O ASN 19 14.105 38.193 9.033 1.00 10.81 O ATOM 170 N TRP 20 13.025 36.296 8.396 1.00 10.23 N ATOM 172 CA TRP 20 11.694 36.593 8.975 1.00 10.23 C ATOM 173 CB TRP 20 10.844 35.323 8.838 1.00 10.23 C ATOM 174 CG TRP 20 11.255 34.149 9.814 1.00 10.23 C ATOM 175 CD2 TRP 20 10.540 33.692 10.986 1.00 10.23 C ATOM 176 CE2 TRP 20 11.258 32.578 11.506 1.00 10.23 C ATOM 177 CE3 TRP 20 9.363 34.115 11.647 1.00 10.23 C ATOM 178 CD1 TRP 20 12.343 33.309 9.690 1.00 10.23 C ATOM 179 NE1 TRP 20 12.343 32.375 10.696 1.00 10.23 N ATOM 181 CZ2 TRP 20 10.840 31.873 12.662 1.00 10.23 C ATOM 182 CZ3 TRP 20 8.942 33.412 12.805 1.00 10.23 C ATOM 183 CH2 TRP 20 9.687 32.302 13.295 1.00 10.23 C ATOM 184 C TRP 20 11.730 36.845 10.477 1.00 10.23 C ATOM 185 O TRP 20 10.689 37.060 11.110 1.00 10.23 O ATOM 186 N ALA 21 12.945 36.937 11.004 1.00 10.69 N ATOM 188 CA ALA 21 13.154 37.227 12.398 1.00 10.69 C ATOM 189 CB ALA 21 14.461 36.680 12.832 1.00 10.69 C ATOM 190 C ALA 21 13.120 38.762 12.452 1.00 10.69 C ATOM 191 O ALA 21 12.843 39.328 13.502 1.00 10.69 O ATOM 192 N SER 22 13.238 39.394 11.265 1.00 10.53 N ATOM 194 CA SER 22 13.206 40.861 11.089 1.00 10.53 C ATOM 195 CB SER 22 13.905 41.276 9.795 1.00 10.53 C ATOM 196 OG SER 22 15.304 41.154 9.919 1.00 10.53 O ATOM 198 C SER 22 11.789 41.446 11.068 1.00 10.53 C ATOM 199 O SER 22 11.586 42.563 11.545 1.00 10.53 O ATOM 200 N LEU 23 10.801 40.665 10.612 1.00 9.90 N ATOM 202 CA LEU 23 9.413 41.145 10.584 1.00 9.90 C ATOM 203 CB LEU 23 8.601 40.540 9.425 1.00 9.90 C ATOM 204 CG LEU 23 8.145 41.290 8.142 1.00 9.90 C ATOM 205 CD1 LEU 23 7.150 42.434 8.418 1.00 9.90 C ATOM 206 CD2 LEU 23 9.318 41.772 7.263 1.00 9.90 C ATOM 207 C LEU 23 8.726 40.885 11.924 1.00 9.90 C ATOM 208 O LEU 23 7.801 41.610 12.307 1.00 9.90 O ATOM 209 N ALA 24 9.254 39.890 12.649 1.00 11.49 N ATOM 211 CA ALA 24 8.766 39.485 13.973 1.00 11.49 C ATOM 212 CB ALA 24 9.111 38.022 14.214 1.00 11.49 C ATOM 213 C ALA 24 9.297 40.383 15.123 1.00 11.49 C ATOM 214 O ALA 24 8.750 40.350 16.233 1.00 11.49 O ATOM 215 N ALA 25 10.320 41.204 14.821 1.00 13.06 N ATOM 217 CA ALA 25 10.976 42.126 15.782 1.00 13.06 C ATOM 218 CB ALA 25 12.414 42.280 15.411 1.00 13.06 C ATOM 219 C ALA 25 10.336 43.511 15.982 1.00 13.06 C ATOM 220 O ALA 25 10.592 44.178 16.990 1.00 13.06 O ATOM 221 N ASN 26 9.449 43.883 15.053 1.00 13.70 N ATOM 223 CA ASN 26 8.652 45.130 15.030 1.00 13.70 C ATOM 224 CB ASN 26 8.442 45.723 13.609 1.00 13.70 C ATOM 225 CG ASN 26 7.818 44.755 12.623 1.00 13.70 C ATOM 226 OD1 ASN 26 6.596 44.595 12.573 1.00 13.70 O ATOM 227 ND2 ASN 26 8.656 44.118 11.814 1.00 13.70 N ATOM 230 C ASN 26 7.372 44.803 15.827 1.00 13.70 C ATOM 231 O ASN 26 6.261 45.210 15.474 1.00 13.70 O ATOM 232 N GLU 27 7.616 44.116 16.956 1.00 15.11 N ATOM 234 CA GLU 27 6.675 43.496 17.911 1.00 15.11 C ATOM 235 CG GLU 27 7.088 41.398 19.419 1.00 15.11 C ATOM 236 CD GLU 27 8.128 40.721 20.296 1.00 15.11 C ATOM 237 OE1 GLU 27 8.889 39.882 19.770 1.00 15.11 O ATOM 238 OE2 GLU 27 8.188 41.024 21.508 1.00 15.11 O ATOM 239 C GLU 27 5.625 44.461 18.485 1.00 15.11 C ATOM 240 O GLU 27 5.461 44.632 19.699 1.00 15.11 O ATOM 241 CB GLU 27 7.493 42.825 19.036 1.00 15.11 C ATOM 242 N LEU 28 4.892 45.034 17.519 1.00 15.72 N ATOM 244 CA LEU 28 3.795 45.992 17.672 1.00 15.72 C ATOM 245 CB LEU 28 3.483 46.652 16.281 1.00 15.72 C ATOM 246 CG LEU 28 2.926 46.126 14.907 1.00 15.72 C ATOM 247 CD1 LEU 28 3.432 44.741 14.488 1.00 15.72 C ATOM 248 CD2 LEU 28 1.394 46.150 14.910 1.00 15.72 C ATOM 249 C LEU 28 2.624 45.120 18.167 1.00 15.72 C ATOM 250 O LEU 28 2.019 44.370 17.383 1.00 15.72 O ATOM 251 N ARG 29 2.479 45.073 19.501 1.00 17.04 N ATOM 253 CA ARG 29 1.448 44.286 20.206 1.00 17.04 C ATOM 254 CB ARG 29 1.145 44.889 21.580 1.00 17.04 C ATOM 255 CG ARG 29 2.251 44.708 22.615 1.00 17.04 C ATOM 256 CD ARG 29 1.890 45.330 23.964 1.00 17.04 C ATOM 257 NE ARG 29 1.863 46.796 23.925 1.00 17.04 N ATOM 259 CZ ARG 29 1.578 47.586 24.961 1.00 17.04 C ATOM 260 NH1 ARG 29 1.285 47.078 26.155 1.00 17.04 N ATOM 263 NH2 ARG 29 1.586 48.902 24.801 1.00 17.04 N ATOM 266 C ARG 29 0.181 44.223 19.359 1.00 17.04 C ATOM 267 O ARG 29 -0.369 45.258 18.962 1.00 17.04 O ATOM 268 N VAL 30 -0.181 42.999 18.971 1.00 17.84 N ATOM 270 CA VAL 30 -1.330 42.766 18.098 1.00 17.84 C ATOM 271 CB VAL 30 -0.980 41.669 16.995 1.00 17.84 C ATOM 272 CG1 VAL 30 -0.835 40.292 17.597 1.00 17.84 C ATOM 273 CG2 VAL 30 -1.982 41.689 15.827 1.00 17.84 C ATOM 274 C VAL 30 -2.713 42.590 18.772 1.00 17.84 C ATOM 275 O VAL 30 -3.026 41.535 19.345 1.00 17.84 O ATOM 276 N THR 31 -3.490 43.681 18.720 1.00 20.08 N ATOM 278 CA THR 31 -4.881 43.760 19.199 1.00 20.08 C ATOM 279 CB THR 31 -5.302 45.220 19.548 1.00 20.08 C ATOM 280 OG1 THR 31 -4.924 46.105 18.485 1.00 20.08 O ATOM 282 CG2 THR 31 -4.644 45.674 20.844 1.00 20.08 C ATOM 283 C THR 31 -5.599 43.237 17.939 1.00 20.08 C ATOM 284 O THR 31 -5.232 43.638 16.821 1.00 20.08 O ATOM 285 N GLU 32 -6.588 42.351 18.089 1.00 21.11 N ATOM 287 CA GLU 32 -7.192 41.738 16.900 1.00 21.11 C ATOM 288 CB GLU 32 -7.697 40.327 17.265 1.00 21.11 C ATOM 289 CG GLU 32 -6.616 39.292 17.544 1.00 21.11 C ATOM 290 CD GLU 32 -6.852 38.522 18.832 1.00 21.11 C ATOM 291 OE1 GLU 32 -6.416 38.998 19.901 1.00 21.11 O ATOM 292 OE2 GLU 32 -7.466 37.437 18.774 1.00 21.11 O ATOM 293 C GLU 32 -8.265 42.460 16.058 1.00 21.11 C ATOM 294 O GLU 32 -9.466 42.204 16.198 1.00 21.11 O ATOM 295 N ARG 33 -7.798 43.434 15.260 1.00 19.35 N ATOM 297 CA ARG 33 -8.594 44.132 14.232 1.00 19.35 C ATOM 298 CB ARG 33 -8.542 45.659 14.401 1.00 19.35 C ATOM 299 CG ARG 33 -9.438 46.197 15.508 1.00 19.35 C ATOM 300 CD ARG 33 -9.336 47.710 15.616 1.00 19.35 C ATOM 301 NE ARG 33 -10.192 48.246 16.677 1.00 19.35 N ATOM 303 CZ ARG 33 -10.303 49.536 16.997 1.00 19.35 C ATOM 304 NH1 ARG 33 -9.614 50.468 16.345 1.00 19.35 N ATOM 307 NH2 ARG 33 -11.115 49.898 17.981 1.00 19.35 N ATOM 310 C ARG 33 -7.808 43.653 12.976 1.00 19.35 C ATOM 311 O ARG 33 -6.687 44.133 12.756 1.00 19.35 O ATOM 312 N PRO 34 -8.335 42.700 12.154 1.00 16.18 N ATOM 313 CD PRO 34 -9.384 41.658 12.282 1.00 16.18 C ATOM 314 CA PRO 34 -7.416 42.393 11.037 1.00 16.18 C ATOM 315 CB PRO 34 -7.721 40.912 10.776 1.00 16.18 C ATOM 316 CG PRO 34 -9.219 40.849 11.018 1.00 16.18 C ATOM 317 C PRO 34 -7.444 43.213 9.715 1.00 16.18 C ATOM 318 O PRO 34 -8.077 42.769 8.752 1.00 16.18 O ATOM 319 N PHE 35 -6.761 44.368 9.643 1.00 13.84 N ATOM 321 CA PHE 35 -6.687 45.098 8.361 1.00 13.84 C ATOM 322 CB PHE 35 -7.738 46.242 8.319 1.00 13.84 C ATOM 323 CG PHE 35 -9.175 45.778 8.115 1.00 13.84 C ATOM 324 CD1 PHE 35 -10.033 45.576 9.225 1.00 13.84 C ATOM 325 CD2 PHE 35 -9.699 45.581 6.814 1.00 13.84 C ATOM 326 CE1 PHE 35 -11.389 45.185 9.043 1.00 13.84 C ATOM 327 CE2 PHE 35 -11.054 45.189 6.618 1.00 13.84 C ATOM 328 CZ PHE 35 -11.900 44.991 7.737 1.00 13.84 C ATOM 329 C PHE 35 -5.306 45.661 7.994 1.00 13.84 C ATOM 330 O PHE 35 -5.209 46.596 7.201 1.00 13.84 O ATOM 331 N TRP 36 -4.235 45.075 8.524 1.00 11.06 N ATOM 333 CA TRP 36 -2.868 45.497 8.184 1.00 11.06 C ATOM 334 CB TRP 36 -2.251 46.387 9.290 1.00 11.06 C ATOM 335 CG TRP 36 -2.925 47.778 9.464 1.00 11.06 C ATOM 336 CD2 TRP 36 -4.064 48.108 10.292 1.00 11.06 C ATOM 337 CE2 TRP 36 -4.286 49.508 10.158 1.00 11.06 C ATOM 338 CE3 TRP 36 -4.920 47.360 11.133 1.00 11.06 C ATOM 339 CD1 TRP 36 -2.526 48.963 8.888 1.00 11.06 C ATOM 340 NE1 TRP 36 -3.335 49.993 9.300 1.00 11.06 N ATOM 342 CZ2 TRP 36 -5.331 50.184 10.835 1.00 11.06 C ATOM 343 CZ3 TRP 36 -5.967 48.034 11.812 1.00 11.06 C ATOM 344 CH2 TRP 36 -6.157 49.435 11.654 1.00 11.06 C ATOM 345 C TRP 36 -2.003 44.300 7.720 1.00 11.06 C ATOM 346 O TRP 36 -1.047 43.901 8.399 1.00 11.06 O ATOM 347 N ILE 37 -2.282 43.822 6.505 1.00 8.71 N ATOM 349 CA ILE 37 -1.664 42.620 5.895 1.00 8.71 C ATOM 350 CB ILE 37 -2.525 42.147 4.664 1.00 8.71 C ATOM 351 CG2 ILE 37 -3.765 41.387 5.164 1.00 8.71 C ATOM 352 CG1 ILE 37 -2.897 43.344 3.760 1.00 8.71 C ATOM 353 CD1 ILE 37 -2.969 43.030 2.259 1.00 8.71 C ATOM 354 C ILE 37 -0.159 42.468 5.526 1.00 8.71 C ATOM 355 O ILE 37 0.325 41.337 5.437 1.00 8.71 O ATOM 356 N SER 38 0.578 43.572 5.373 1.00 8.52 N ATOM 358 CA SER 38 2.007 43.542 4.975 1.00 8.52 C ATOM 359 CB SER 38 2.353 44.850 4.266 1.00 8.52 C ATOM 360 OG SER 38 2.138 45.957 5.119 1.00 8.52 O ATOM 362 C SER 38 3.062 43.262 6.066 1.00 8.52 C ATOM 363 O SER 38 4.180 42.820 5.777 1.00 8.52 O ATOM 364 N SER 39 2.659 43.517 7.306 1.00 7.65 N ATOM 366 CA SER 39 3.427 43.395 8.549 1.00 7.65 C ATOM 367 CB SER 39 3.025 44.489 9.538 1.00 7.65 C ATOM 368 OG SER 39 4.113 44.792 10.396 1.00 7.65 O ATOM 370 C SER 39 3.663 42.033 9.237 1.00 7.65 C ATOM 371 O SER 39 3.934 42.019 10.443 1.00 7.65 O ATOM 372 N PHE 40 3.709 40.931 8.470 1.00 6.36 N ATOM 374 CA PHE 40 3.765 39.537 8.994 1.00 6.36 C ATOM 375 CB PHE 40 3.974 38.560 7.797 1.00 6.36 C ATOM 376 CG PHE 40 5.202 38.857 6.902 1.00 6.36 C ATOM 377 CD1 PHE 40 6.358 38.046 6.981 1.00 6.36 C ATOM 378 CD2 PHE 40 5.161 39.873 5.915 1.00 6.36 C ATOM 379 CE1 PHE 40 7.453 38.233 6.091 1.00 6.36 C ATOM 380 CE2 PHE 40 6.247 40.074 5.019 1.00 6.36 C ATOM 381 CZ PHE 40 7.397 39.250 5.106 1.00 6.36 C ATOM 382 C PHE 40 4.814 39.276 10.117 1.00 6.36 C ATOM 383 O PHE 40 5.921 38.764 9.914 1.00 6.36 O ATOM 384 N ILE 41 4.371 39.713 11.310 1.00 5.78 N ATOM 386 CA ILE 41 5.079 39.705 12.609 1.00 5.78 C ATOM 387 CB ILE 41 4.692 41.087 13.361 1.00 5.78 C ATOM 388 CG2 ILE 41 3.138 41.301 13.384 1.00 5.78 C ATOM 389 CG1 ILE 41 5.434 41.302 14.695 1.00 5.78 C ATOM 390 CD1 ILE 41 4.669 40.996 16.035 1.00 5.78 C ATOM 391 C ILE 41 4.870 38.472 13.542 1.00 5.78 C ATOM 392 O ILE 41 5.383 38.453 14.675 1.00 5.78 O ATOM 393 N GLY 42 4.315 37.392 12.995 1.00 5.41 N ATOM 395 CA GLY 42 4.097 36.164 13.756 1.00 5.41 C ATOM 396 C GLY 42 3.210 35.955 14.986 1.00 5.41 C ATOM 397 O GLY 42 3.099 34.794 15.383 1.00 5.41 O ATOM 398 N ARG 43 2.570 36.979 15.578 1.00 4.41 N ATOM 400 CA ARG 43 1.748 36.744 16.795 1.00 4.41 C ATOM 401 CB ARG 43 2.368 37.468 17.999 1.00 4.41 C ATOM 402 CG ARG 43 3.844 37.288 18.217 1.00 4.41 C ATOM 403 CD ARG 43 4.356 38.223 19.322 1.00 4.41 C ATOM 404 NE ARG 43 4.361 39.646 18.947 1.00 4.41 N ATOM 406 CZ ARG 43 3.536 40.580 19.429 1.00 4.41 C ATOM 407 NH1 ARG 43 2.600 40.280 20.323 1.00 4.41 N ATOM 410 NH2 ARG 43 3.651 41.833 19.007 1.00 4.41 N ATOM 413 C ARG 43 0.264 37.125 16.817 1.00 4.41 C ATOM 414 O ARG 43 -0.238 37.550 17.867 1.00 4.41 O ATOM 415 N SER 44 -0.475 36.845 15.746 1.00 4.06 N ATOM 417 CA SER 44 -1.910 37.157 15.699 1.00 4.06 C ATOM 418 CB SER 44 -2.233 38.171 14.612 1.00 4.06 C ATOM 419 OG SER 44 -3.479 38.780 14.874 1.00 4.06 O ATOM 421 C SER 44 -2.740 35.902 15.511 1.00 4.06 C ATOM 422 O SER 44 -2.412 35.034 14.699 1.00 4.06 O ATOM 423 N LYS 45 -3.858 35.829 16.222 1.00 3.89 N ATOM 425 CA LYS 45 -4.675 34.632 16.159 1.00 3.89 C ATOM 426 CG LYS 45 -4.473 34.889 18.752 1.00 3.89 C ATOM 427 CD LYS 45 -4.452 34.115 20.060 1.00 3.89 C ATOM 428 CE LYS 45 -4.286 35.046 21.250 1.00 3.89 C ATOM 429 NZ LYS 45 -4.265 34.301 22.540 1.00 3.89 N ATOM 433 C LYS 45 -6.110 34.736 15.641 1.00 3.89 C ATOM 434 O LYS 45 -6.745 33.709 15.430 1.00 3.89 O ATOM 435 CB LYS 45 -4.643 33.941 17.540 1.00 3.89 C TER END