####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS498_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS498_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 18 - 40 4.80 12.29 LCS_AVERAGE: 49.02 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 9 - 18 1.74 13.99 LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 1.36 11.43 LCS_AVERAGE: 19.89 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 20 - 28 0.93 11.57 LCS_AVERAGE: 12.50 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 7 10 3 3 5 6 6 6 8 8 13 13 15 17 18 18 20 22 23 24 25 26 LCS_GDT V 3 V 3 4 7 10 3 4 5 6 6 6 8 8 11 13 13 17 18 22 22 22 23 24 28 29 LCS_GDT Q 4 Q 4 4 7 19 3 4 5 6 6 7 8 12 15 17 17 17 19 22 23 25 28 28 29 31 LCS_GDT G 5 G 5 4 7 22 3 4 5 6 6 7 8 13 15 17 18 21 22 24 26 27 28 29 30 31 LCS_GDT P 6 P 6 4 7 22 4 4 4 6 7 8 9 15 17 19 20 21 22 24 26 27 28 29 30 31 LCS_GDT W 7 W 7 4 7 22 4 4 5 6 6 7 8 11 17 19 20 21 22 24 26 27 28 29 31 33 LCS_GDT V 8 V 8 4 7 22 4 4 4 11 11 11 14 15 17 19 20 21 22 24 26 28 31 32 33 34 LCS_GDT G 9 G 9 6 10 22 4 8 9 11 13 13 15 16 17 19 20 21 22 24 26 28 31 32 33 34 LCS_GDT S 10 S 10 6 10 22 4 5 7 10 13 13 15 16 17 19 20 21 22 24 26 28 31 32 33 34 LCS_GDT S 11 S 11 6 10 22 4 5 7 10 13 13 15 16 17 19 20 21 22 24 26 28 31 32 33 34 LCS_GDT Y 12 Y 12 6 10 22 4 5 7 10 13 13 15 16 17 19 20 21 22 24 26 28 31 32 33 34 LCS_GDT V 13 V 13 6 10 22 4 5 7 10 13 13 15 16 17 19 20 21 22 24 26 28 31 32 33 34 LCS_GDT A 14 A 14 6 10 22 3 5 7 10 13 13 15 16 17 19 20 21 22 24 26 28 31 32 33 34 LCS_GDT E 15 E 15 4 10 22 3 5 7 10 13 13 15 16 17 19 20 21 22 24 25 28 31 32 33 34 LCS_GDT T 16 T 16 4 10 22 3 4 7 10 13 13 15 16 17 19 20 21 22 24 24 28 31 32 33 34 LCS_GDT G 17 G 17 3 10 22 3 3 5 8 11 13 15 16 17 19 20 21 22 24 26 28 31 32 33 34 LCS_GDT Q 18 Q 18 4 10 23 3 4 7 10 13 13 15 16 17 19 20 21 22 24 26 28 31 32 33 34 LCS_GDT N 19 N 19 4 8 23 3 4 4 5 5 11 14 15 17 19 20 21 22 24 26 28 31 32 33 34 LCS_GDT W 20 W 20 9 10 23 6 8 9 11 11 12 14 15 17 19 20 21 22 24 26 28 31 32 33 34 LCS_GDT A 21 A 21 9 10 23 6 8 9 11 13 13 15 16 17 19 20 21 22 24 26 28 31 32 33 34 LCS_GDT S 22 S 22 9 10 23 6 8 9 11 13 13 15 16 17 19 20 21 22 24 26 27 31 32 33 34 LCS_GDT L 23 L 23 9 10 23 6 8 9 11 11 11 15 16 17 18 20 21 22 24 26 28 31 32 33 34 LCS_GDT A 24 A 24 9 10 23 6 8 9 11 11 11 12 13 16 17 20 21 22 24 26 28 31 32 33 34 LCS_GDT A 25 A 25 9 10 23 6 8 9 11 11 11 12 13 16 17 18 21 22 24 26 28 31 32 33 34 LCS_GDT N 26 N 26 9 10 23 4 8 9 11 11 11 12 13 15 17 18 20 22 24 26 28 31 32 33 34 LCS_GDT E 27 E 27 9 10 23 3 4 9 11 11 11 12 13 15 17 18 20 22 24 26 28 31 32 33 34 LCS_GDT L 28 L 28 9 10 23 3 4 9 11 11 11 12 13 15 17 18 20 22 24 26 28 31 32 33 34 LCS_GDT R 29 R 29 6 10 23 3 4 6 7 10 10 12 14 16 17 18 20 22 23 26 28 31 32 33 34 LCS_GDT V 30 V 30 6 8 23 3 5 6 7 8 10 12 14 16 17 18 19 21 23 25 28 31 32 33 34 LCS_GDT T 31 T 31 6 8 23 3 5 6 7 8 10 12 14 16 17 18 19 21 23 25 28 31 32 33 34 LCS_GDT E 32 E 32 6 8 23 3 5 6 7 8 9 11 14 16 17 18 19 21 23 25 28 31 32 33 34 LCS_GDT R 33 R 33 6 8 23 2 5 6 7 8 10 12 14 16 17 18 19 22 23 25 28 31 32 33 34 LCS_GDT P 34 P 34 6 8 23 2 5 6 7 8 10 12 14 16 17 18 19 21 23 25 27 30 32 33 34 LCS_GDT F 35 F 35 3 8 23 3 3 4 6 7 10 12 14 16 17 18 19 22 23 25 28 31 32 33 34 LCS_GDT W 36 W 36 3 8 23 3 4 5 8 10 12 13 15 17 17 19 20 22 23 25 28 31 32 33 34 LCS_GDT I 37 I 37 3 8 23 3 4 5 8 10 12 13 16 17 18 19 21 22 23 25 28 31 32 33 34 LCS_GDT S 38 S 38 3 8 23 3 4 6 10 13 13 15 16 17 18 19 21 22 23 25 28 31 32 33 34 LCS_GDT S 39 S 39 3 8 23 1 3 4 10 13 13 15 16 17 19 20 21 22 23 25 28 31 32 33 34 LCS_GDT F 40 F 40 3 8 23 3 4 5 7 8 11 13 15 17 19 20 21 22 24 26 28 31 32 33 34 LCS_GDT I 41 I 41 5 8 19 4 4 5 6 8 9 11 14 16 17 20 21 22 24 26 27 30 31 33 34 LCS_GDT G 42 G 42 5 8 19 4 4 5 6 8 8 10 11 13 16 18 20 22 24 26 27 28 29 30 31 LCS_GDT R 43 R 43 5 8 19 4 4 5 6 8 9 11 14 16 17 18 20 22 23 26 27 28 28 30 31 LCS_GDT S 44 S 44 5 8 19 4 4 5 6 8 8 10 13 16 17 18 19 20 22 23 25 25 27 29 31 LCS_GDT K 45 K 45 5 8 19 3 4 5 6 8 9 10 12 15 17 18 19 21 22 22 25 25 27 28 31 LCS_AVERAGE LCS_A: 27.13 ( 12.50 19.89 49.02 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 8 9 11 13 13 15 16 17 19 20 21 22 24 26 28 31 32 33 34 GDT PERCENT_AT 13.64 18.18 20.45 25.00 29.55 29.55 34.09 36.36 38.64 43.18 45.45 47.73 50.00 54.55 59.09 63.64 70.45 72.73 75.00 77.27 GDT RMS_LOCAL 0.29 0.54 0.73 1.14 1.72 1.72 2.28 2.49 2.84 3.53 3.66 3.65 3.84 4.80 5.08 6.01 6.34 6.40 6.52 6.67 GDT RMS_ALL_AT 11.70 11.79 11.88 11.76 13.44 13.44 12.99 12.96 13.53 12.51 12.19 12.38 12.51 10.66 10.84 10.62 10.39 10.70 10.57 10.45 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 27.082 0 0.048 0.076 27.915 0.000 0.000 - LGA V 3 V 3 22.742 0 0.186 1.205 24.512 0.000 0.000 22.500 LGA Q 4 Q 4 21.463 0 0.184 0.665 28.874 0.000 0.000 26.367 LGA G 5 G 5 16.511 0 0.118 0.118 18.807 0.000 0.000 - LGA P 6 P 6 12.694 0 0.529 0.482 15.617 0.000 0.000 13.391 LGA W 7 W 7 9.604 0 0.011 0.877 14.890 0.000 0.000 14.890 LGA V 8 V 8 6.955 0 0.601 0.646 10.720 0.455 0.260 8.527 LGA G 9 G 9 1.330 0 0.577 0.577 2.877 52.273 52.273 - LGA S 10 S 10 1.913 0 0.055 0.163 2.810 47.727 40.909 2.628 LGA S 11 S 11 2.208 0 0.220 0.590 4.106 38.636 29.697 4.106 LGA Y 12 Y 12 2.405 0 0.197 0.887 11.943 41.364 16.212 11.943 LGA V 13 V 13 1.680 0 0.364 0.369 2.127 54.545 53.247 1.904 LGA A 14 A 14 1.136 0 0.155 0.149 1.429 65.455 65.455 - LGA E 15 E 15 0.764 0 0.309 1.269 3.018 77.727 58.586 2.684 LGA T 16 T 16 2.335 0 0.321 1.004 7.002 60.000 35.325 4.425 LGA G 17 G 17 3.161 0 0.211 0.211 4.687 22.273 22.273 - LGA Q 18 Q 18 1.145 0 0.578 1.454 6.060 36.364 21.818 5.570 LGA N 19 N 19 6.795 0 0.189 0.176 10.642 0.455 0.227 8.780 LGA W 20 W 20 5.519 0 0.605 1.240 16.935 11.364 3.247 16.935 LGA A 21 A 21 2.129 0 0.029 0.045 4.481 25.909 21.818 - LGA S 22 S 22 2.985 0 0.063 0.615 4.112 27.273 23.030 3.486 LGA L 23 L 23 3.935 0 0.007 1.400 8.572 15.455 7.955 8.572 LGA A 24 A 24 6.873 0 0.116 0.125 9.729 0.000 0.000 - LGA A 25 A 25 8.778 0 0.207 0.220 12.735 0.000 0.000 - LGA N 26 N 26 11.533 0 0.129 0.567 15.361 0.000 0.000 9.920 LGA E 27 E 27 15.594 0 0.186 0.850 18.147 0.000 0.000 13.174 LGA L 28 L 28 16.514 0 0.221 0.557 18.091 0.000 0.000 12.527 LGA R 29 R 29 19.827 0 0.247 1.378 29.875 0.000 0.000 29.582 LGA V 30 V 30 18.006 0 0.145 1.004 18.185 0.000 0.000 16.909 LGA T 31 T 31 19.649 0 0.236 1.181 23.717 0.000 0.000 22.546 LGA E 32 E 32 18.422 0 0.253 1.069 22.383 0.000 0.000 22.148 LGA R 33 R 33 16.004 0 0.220 1.672 20.987 0.000 0.000 20.987 LGA P 34 P 34 14.224 0 0.147 0.162 14.339 0.000 0.000 12.634 LGA F 35 F 35 12.491 0 0.594 0.699 20.047 0.000 0.000 19.931 LGA W 36 W 36 6.350 0 0.308 1.158 9.653 1.364 0.519 9.218 LGA I 37 I 37 4.273 0 0.189 1.513 8.914 23.636 12.500 8.914 LGA S 38 S 38 2.075 0 0.203 0.198 3.994 36.364 27.879 3.994 LGA S 39 S 39 3.204 0 0.204 0.320 5.727 18.636 30.606 0.837 LGA F 40 F 40 6.796 0 0.510 1.092 11.068 0.455 0.165 6.263 LGA I 41 I 41 11.714 0 0.123 1.236 15.338 0.000 0.000 13.464 LGA G 42 G 42 18.463 0 0.154 0.154 21.980 0.000 0.000 - LGA R 43 R 43 19.724 0 0.173 1.196 22.831 0.000 0.000 21.534 LGA S 44 S 44 23.504 0 0.201 0.607 25.743 0.000 0.000 25.451 LGA K 45 K 45 24.415 0 0.736 1.090 29.507 0.000 0.000 29.297 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 9.627 9.508 10.957 14.948 11.909 6.494 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 16 2.49 35.795 31.806 0.617 LGA_LOCAL RMSD: 2.491 Number of atoms: 16 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 12.963 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 9.627 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.211348 * X + 0.969346 * Y + 0.125305 * Z + -11.849115 Y_new = -0.751969 * X + 0.243156 * Y + -0.612713 * Z + 60.545692 Z_new = -0.624400 * X + 0.035270 * Y + 0.780308 * Z + 23.136045 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.296806 0.674363 0.045170 [DEG: -74.3015 38.6381 2.5880 ] ZXZ: 0.201726 0.675638 -1.514369 [DEG: 11.5580 38.7112 -86.7670 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS498_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS498_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 16 2.49 31.806 9.63 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS498_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT N/A ATOM 12 N ALA 2 -12.865 30.031 2.376 1.00 15.26 N ATOM 14 CA ALA 2 -13.413 31.268 1.796 1.00 15.26 C ATOM 15 CB ALA 2 -14.078 32.101 2.879 1.00 15.26 C ATOM 16 C ALA 2 -12.221 32.034 1.181 1.00 15.26 C ATOM 17 O ALA 2 -11.123 32.014 1.751 1.00 15.26 O ATOM 18 N VAL 3 -12.444 32.694 0.033 1.00 13.84 N ATOM 20 CA VAL 3 -11.388 33.394 -0.724 1.00 13.84 C ATOM 21 CB VAL 3 -11.216 32.688 -2.167 1.00 13.84 C ATOM 22 CG1 VAL 3 -12.503 32.812 -3.025 1.00 13.84 C ATOM 23 CG2 VAL 3 -9.964 33.181 -2.916 1.00 13.84 C ATOM 24 C VAL 3 -11.329 34.953 -0.829 1.00 13.84 C ATOM 25 O VAL 3 -12.163 35.576 -1.502 1.00 13.84 O ATOM 26 N GLN 4 -10.383 35.545 -0.078 1.00 12.72 N ATOM 28 CA GLN 4 -10.040 36.985 -0.084 1.00 12.72 C ATOM 29 CB GLN 4 -10.556 37.680 1.185 1.00 12.72 C ATOM 30 CG GLN 4 -11.255 39.009 0.917 1.00 12.72 C ATOM 31 CD GLN 4 -12.021 39.524 2.123 1.00 12.72 C ATOM 32 OE1 GLN 4 -11.508 40.330 2.898 1.00 12.72 O ATOM 33 NE2 GLN 4 -13.257 39.064 2.282 1.00 12.72 N ATOM 36 C GLN 4 -8.509 36.834 -0.106 1.00 12.72 C ATOM 37 O GLN 4 -7.886 36.561 0.931 1.00 12.72 O ATOM 38 N GLY 5 -7.926 36.960 -1.296 1.00 11.72 N ATOM 40 CA GLY 5 -6.500 36.753 -1.461 1.00 11.72 C ATOM 41 C GLY 5 -5.730 37.511 -2.517 1.00 11.72 C ATOM 42 O GLY 5 -6.298 38.423 -3.127 1.00 11.72 O ATOM 43 N PRO 6 -4.423 37.186 -2.743 1.00 11.01 N ATOM 44 CD PRO 6 -3.922 37.559 -4.089 1.00 11.01 C ATOM 45 CA PRO 6 -3.527 36.182 -2.128 1.00 11.01 C ATOM 46 CB PRO 6 -2.877 35.530 -3.351 1.00 11.01 C ATOM 47 CG PRO 6 -2.688 36.687 -4.278 1.00 11.01 C ATOM 48 C PRO 6 -2.499 36.648 -1.059 1.00 11.01 C ATOM 49 O PRO 6 -1.425 37.142 -1.420 1.00 11.01 O ATOM 50 N TRP 7 -2.833 36.522 0.230 1.00 9.77 N ATOM 52 CA TRP 7 -1.912 36.910 1.308 1.00 9.77 C ATOM 53 CB TRP 7 -2.367 38.212 2.018 1.00 9.77 C ATOM 54 CG TRP 7 -1.916 39.575 1.393 1.00 9.77 C ATOM 55 CD2 TRP 7 -1.709 40.815 2.102 1.00 9.77 C ATOM 56 CE2 TRP 7 -1.342 41.795 1.137 1.00 9.77 C ATOM 57 CE3 TRP 7 -1.800 41.199 3.461 1.00 9.77 C ATOM 58 CD1 TRP 7 -1.667 39.860 0.064 1.00 9.77 C ATOM 59 NE1 TRP 7 -1.326 41.181 -0.086 1.00 9.77 N ATOM 61 CZ2 TRP 7 -1.063 43.140 1.482 1.00 9.77 C ATOM 62 CZ3 TRP 7 -1.523 42.544 3.809 1.00 9.77 C ATOM 63 CH2 TRP 7 -1.159 43.495 2.815 1.00 9.77 C ATOM 64 C TRP 7 -1.759 35.748 2.287 1.00 9.77 C ATOM 65 O TRP 7 -2.070 35.869 3.480 1.00 9.77 O ATOM 66 N VAL 8 -1.246 34.620 1.770 1.00 9.53 N ATOM 68 CA VAL 8 -1.004 33.435 2.592 1.00 9.53 C ATOM 69 CB VAL 8 -1.532 32.099 1.927 1.00 9.53 C ATOM 70 CG1 VAL 8 -1.334 30.900 2.870 1.00 9.53 C ATOM 71 CG2 VAL 8 -3.009 32.229 1.556 1.00 9.53 C ATOM 72 C VAL 8 0.514 33.393 2.780 1.00 9.53 C ATOM 73 O VAL 8 1.270 32.953 1.900 1.00 9.53 O ATOM 74 N GLY 9 0.937 33.952 3.914 1.00 10.92 N ATOM 76 CA GLY 9 2.330 33.957 4.313 1.00 10.92 C ATOM 77 C GLY 9 2.655 32.527 4.700 1.00 10.92 C ATOM 78 O GLY 9 2.168 32.073 5.737 1.00 10.92 O ATOM 79 N SER 10 3.393 31.806 3.853 1.00 12.25 N ATOM 81 CA SER 10 3.740 30.404 4.110 1.00 12.25 C ATOM 82 CB SER 10 3.762 29.621 2.794 1.00 12.25 C ATOM 83 OG SER 10 4.786 30.105 1.939 1.00 12.25 O ATOM 85 C SER 10 5.087 30.201 4.822 1.00 12.25 C ATOM 86 O SER 10 5.322 29.125 5.381 1.00 12.25 O ATOM 87 N SER 11 5.925 31.246 4.851 1.00 14.55 N ATOM 89 CA SER 11 7.258 31.175 5.473 1.00 14.55 C ATOM 90 OG SER 11 8.238 33.008 4.189 1.00 14.55 O ATOM 92 C SER 11 7.384 31.956 6.786 1.00 14.55 C ATOM 93 O SER 11 8.442 31.939 7.426 1.00 14.55 O ATOM 94 CB SER 11 8.340 31.626 4.479 1.00 14.55 C ATOM 95 N TYR 12 6.289 32.609 7.191 1.00 15.29 N ATOM 97 CA TYR 12 6.216 33.366 8.448 1.00 15.29 C ATOM 98 CB TYR 12 5.399 34.667 8.244 1.00 15.29 C ATOM 99 CG TYR 12 5.728 35.838 9.178 1.00 15.29 C ATOM 100 CD1 TYR 12 5.041 36.009 10.406 1.00 15.29 C ATOM 101 CE1 TYR 12 5.319 37.114 11.259 1.00 15.29 C ATOM 102 CD2 TYR 12 6.703 36.804 8.825 1.00 15.29 C ATOM 103 CE2 TYR 12 6.986 37.911 9.672 1.00 15.29 C ATOM 104 CZ TYR 12 6.290 38.056 10.883 1.00 15.29 C ATOM 105 OH TYR 12 6.563 39.127 11.703 1.00 15.29 O ATOM 107 C TYR 12 5.518 32.394 9.421 1.00 15.29 C ATOM 108 O TYR 12 5.193 32.751 10.563 1.00 15.29 O ATOM 109 N VAL 13 5.348 31.147 8.941 1.00 13.83 N ATOM 111 CA VAL 13 4.682 30.064 9.684 1.00 13.83 C ATOM 112 CB VAL 13 3.529 29.453 8.762 1.00 13.83 C ATOM 113 CG1 VAL 13 2.679 28.424 9.507 1.00 13.83 C ATOM 114 CG2 VAL 13 2.609 30.558 8.270 1.00 13.83 C ATOM 115 C VAL 13 5.694 28.971 10.146 1.00 13.83 C ATOM 116 O VAL 13 5.321 27.805 10.333 1.00 13.83 O ATOM 117 N ALA 14 6.969 29.348 10.316 1.00 16.35 N ATOM 119 CA ALA 14 7.997 28.426 10.853 1.00 16.35 C ATOM 120 CB ALA 14 9.294 28.664 10.144 1.00 16.35 C ATOM 121 C ALA 14 8.123 28.745 12.360 1.00 16.35 C ATOM 122 O ALA 14 8.750 28.031 13.140 1.00 16.35 O ATOM 123 N GLU 15 7.441 29.843 12.688 1.00 17.56 N ATOM 125 CA GLU 15 7.204 30.549 13.962 1.00 17.56 C ATOM 126 CB GLU 15 7.259 32.070 13.736 1.00 17.56 C ATOM 127 CG GLU 15 8.590 32.589 13.200 1.00 17.56 C ATOM 128 CD GLU 15 8.592 34.092 12.996 1.00 17.56 C ATOM 129 OE1 GLU 15 8.956 34.823 13.941 1.00 17.56 O ATOM 130 OE2 GLU 15 8.236 34.545 11.887 1.00 17.56 O ATOM 131 C GLU 15 5.783 30.083 14.284 1.00 17.56 C ATOM 132 O GLU 15 5.058 30.747 15.046 1.00 17.56 O ATOM 133 N THR 16 5.432 28.891 13.773 1.00 16.60 N ATOM 135 CA THR 16 4.047 28.429 13.669 1.00 16.60 C ATOM 136 CB THR 16 4.049 26.914 13.175 1.00 16.60 C ATOM 137 OG1 THR 16 2.706 26.430 13.039 1.00 16.60 O ATOM 139 CG2 THR 16 4.848 25.988 14.131 1.00 16.60 C ATOM 140 C THR 16 3.045 28.568 14.804 1.00 16.60 C ATOM 141 O THR 16 2.277 29.523 14.674 1.00 16.60 O ATOM 142 N GLY 17 3.062 27.886 15.949 1.00 16.68 N ATOM 144 CA GLY 17 1.993 28.251 16.875 1.00 16.68 C ATOM 145 C GLY 17 0.747 28.625 16.052 1.00 16.68 C ATOM 146 O GLY 17 0.088 29.617 16.375 1.00 16.68 O ATOM 147 N GLN 18 0.485 27.869 14.965 1.00 14.96 N ATOM 149 CA GLN 18 -0.487 28.180 13.885 1.00 14.96 C ATOM 150 CB GLN 18 -0.433 27.045 12.829 1.00 14.96 C ATOM 151 CG GLN 18 -0.945 25.651 13.280 1.00 14.96 C ATOM 152 CD GLN 18 -0.852 24.611 12.181 1.00 14.96 C ATOM 153 OE1 GLN 18 0.150 23.906 12.062 1.00 14.96 O ATOM 154 NE2 GLN 18 -1.899 24.511 11.368 1.00 14.96 N ATOM 157 C GLN 18 -1.958 28.530 14.112 1.00 14.96 C ATOM 158 O GLN 18 -2.801 28.320 13.224 1.00 14.96 O ATOM 159 N ASN 19 -2.213 29.219 15.224 1.00 15.79 N ATOM 161 CA ASN 19 -3.548 29.703 15.542 1.00 15.79 C ATOM 162 CB ASN 19 -3.797 29.574 17.045 1.00 15.79 C ATOM 163 CG ASN 19 -3.740 28.134 17.521 1.00 15.79 C ATOM 164 OD1 ASN 19 -2.682 27.637 17.912 1.00 15.79 O ATOM 165 ND2 ASN 19 -4.888 27.459 17.514 1.00 15.79 N ATOM 168 C ASN 19 -3.607 31.182 15.105 1.00 15.79 C ATOM 169 O ASN 19 -4.616 31.860 15.319 1.00 15.79 O ATOM 170 N TRP 20 -2.600 31.617 14.333 1.00 14.59 N ATOM 172 CA TRP 20 -2.550 33.002 13.852 1.00 14.59 C ATOM 173 CB TRP 20 -1.095 33.522 13.902 1.00 14.59 C ATOM 174 CG TRP 20 -0.913 35.027 14.221 1.00 14.59 C ATOM 175 CD2 TRP 20 -0.716 35.634 15.519 1.00 14.59 C ATOM 176 CE2 TRP 20 -0.554 37.032 15.305 1.00 14.59 C ATOM 177 CE3 TRP 20 -0.660 35.134 16.841 1.00 14.59 C ATOM 178 CD1 TRP 20 -0.862 36.062 13.313 1.00 14.59 C ATOM 179 NE1 TRP 20 -0.649 37.255 13.958 1.00 14.59 N ATOM 181 CZ2 TRP 20 -0.338 37.946 16.366 1.00 14.59 C ATOM 182 CZ3 TRP 20 -0.444 36.047 17.905 1.00 14.59 C ATOM 183 CH2 TRP 20 -0.287 37.439 17.651 1.00 14.59 C ATOM 184 C TRP 20 -3.142 33.120 12.429 1.00 14.59 C ATOM 185 O TRP 20 -3.188 34.222 11.855 1.00 14.59 O ATOM 186 N ALA 21 -3.708 32.010 11.926 1.00 13.49 N ATOM 188 CA ALA 21 -4.350 31.991 10.602 1.00 13.49 C ATOM 189 CB ALA 21 -4.278 30.618 10.026 1.00 13.49 C ATOM 190 C ALA 21 -5.809 32.336 10.803 1.00 13.49 C ATOM 191 O ALA 21 -6.450 32.927 9.934 1.00 13.49 O ATOM 192 N SER 22 -6.270 32.024 12.015 1.00 15.49 N ATOM 194 CA SER 22 -7.636 32.238 12.459 1.00 15.49 C ATOM 195 CB SER 22 -8.026 31.099 13.389 1.00 15.49 C ATOM 196 OG SER 22 -7.673 29.869 12.768 1.00 15.49 O ATOM 198 C SER 22 -7.905 33.616 13.070 1.00 15.49 C ATOM 199 O SER 22 -9.010 34.139 12.931 1.00 15.49 O ATOM 200 N LEU 23 -6.850 34.241 13.617 1.00 16.01 N ATOM 202 CA LEU 23 -6.933 35.565 14.266 1.00 16.01 C ATOM 203 CB LEU 23 -5.803 35.673 15.315 1.00 16.01 C ATOM 204 CG LEU 23 -5.416 36.888 16.187 1.00 16.01 C ATOM 205 CD1 LEU 23 -6.293 37.012 17.447 1.00 16.01 C ATOM 206 CD2 LEU 23 -3.964 36.742 16.600 1.00 16.01 C ATOM 207 C LEU 23 -6.805 36.706 13.245 1.00 16.01 C ATOM 208 O LEU 23 -7.448 37.750 13.393 1.00 16.01 O ATOM 209 N ALA 24 -6.071 36.448 12.162 1.00 15.03 N ATOM 211 CA ALA 24 -5.856 37.436 11.106 1.00 15.03 C ATOM 212 CB ALA 24 -4.559 37.164 10.401 1.00 15.03 C ATOM 213 C ALA 24 -7.025 37.504 10.115 1.00 15.03 C ATOM 214 O ALA 24 -7.166 38.487 9.376 1.00 15.03 O ATOM 215 N ALA 25 -7.915 36.507 10.209 1.00 15.50 N ATOM 217 CA ALA 25 -9.084 36.373 9.329 1.00 15.50 C ATOM 218 CB ALA 25 -9.403 34.907 9.141 1.00 15.50 C ATOM 219 C ALA 25 -10.362 37.163 9.653 1.00 15.50 C ATOM 220 O ALA 25 -11.278 37.205 8.830 1.00 15.50 O ATOM 221 N ASN 26 -10.474 37.738 10.848 1.00 18.04 N ATOM 223 CA ASN 26 -11.684 38.500 11.176 1.00 18.04 C ATOM 224 CB ASN 26 -12.171 38.095 12.571 1.00 18.04 C ATOM 225 CG ASN 26 -12.569 36.625 12.645 1.00 18.04 C ATOM 226 OD1 ASN 26 -13.727 36.271 12.414 1.00 18.04 O ATOM 227 ND2 ASN 26 -11.611 35.768 12.988 1.00 18.04 N ATOM 230 C ASN 26 -11.679 40.032 11.028 1.00 18.04 C ATOM 231 O ASN 26 -12.751 40.621 10.926 1.00 18.04 O ATOM 232 N GLU 27 -10.493 40.655 10.947 1.00 19.19 N ATOM 234 CA GLU 27 -10.361 42.131 10.873 1.00 19.19 C ATOM 235 CG GLU 27 -7.937 42.020 11.833 1.00 19.19 C ATOM 236 CD GLU 27 -7.344 41.507 13.137 1.00 19.19 C ATOM 237 OE1 GLU 27 -6.438 42.171 13.680 1.00 19.19 O ATOM 238 OE2 GLU 27 -7.767 40.430 13.611 1.00 19.19 O ATOM 239 C GLU 27 -10.030 42.984 9.615 1.00 19.19 C ATOM 240 O GLU 27 -10.004 44.209 9.730 1.00 19.19 O ATOM 241 CB GLU 27 -9.377 42.530 11.986 1.00 19.19 C ATOM 242 N LEU 28 -9.714 42.380 8.463 1.00 17.74 N ATOM 244 CA LEU 28 -9.362 43.158 7.240 1.00 17.74 C ATOM 245 CB LEU 28 -7.844 43.029 6.955 1.00 17.74 C ATOM 246 CG LEU 28 -6.638 43.190 7.907 1.00 17.74 C ATOM 247 CD1 LEU 28 -5.493 43.681 7.034 1.00 17.74 C ATOM 248 CD2 LEU 28 -6.794 44.147 9.090 1.00 17.74 C ATOM 249 C LEU 28 -10.177 42.986 5.935 1.00 17.74 C ATOM 250 O LEU 28 -9.576 42.796 4.871 1.00 17.74 O ATOM 251 N ARG 29 -11.509 43.116 5.990 1.00 17.86 N ATOM 253 CA ARG 29 -12.434 42.903 4.839 1.00 17.86 C ATOM 254 CB ARG 29 -13.835 43.410 5.218 1.00 17.86 C ATOM 255 CG ARG 29 -14.998 42.491 4.787 1.00 17.86 C ATOM 256 CD ARG 29 -16.323 43.240 4.676 1.00 17.86 C ATOM 257 NE ARG 29 -16.352 44.183 3.553 1.00 17.86 N ATOM 259 CZ ARG 29 -17.384 44.962 3.230 1.00 17.86 C ATOM 260 NH1 ARG 29 -17.289 45.776 2.188 1.00 17.86 N ATOM 263 NH2 ARG 29 -18.512 44.939 3.935 1.00 17.86 N ATOM 266 C ARG 29 -12.136 43.347 3.389 1.00 17.86 C ATOM 267 O ARG 29 -12.861 42.934 2.472 1.00 17.86 O ATOM 268 N VAL 30 -11.024 44.048 3.156 1.00 16.74 N ATOM 270 CA VAL 30 -10.714 44.550 1.805 1.00 16.74 C ATOM 271 CB VAL 30 -10.808 46.111 1.751 1.00 16.74 C ATOM 272 CG1 VAL 30 -12.263 46.524 1.908 1.00 16.74 C ATOM 273 CG2 VAL 30 -9.953 46.764 2.842 1.00 16.74 C ATOM 274 C VAL 30 -9.493 44.017 1.026 1.00 16.74 C ATOM 275 O VAL 30 -8.338 44.258 1.408 1.00 16.74 O ATOM 276 N THR 31 -9.779 43.372 -0.117 1.00 16.18 N ATOM 278 CA THR 31 -8.763 42.760 -0.995 1.00 16.18 C ATOM 279 CB THR 31 -9.211 41.296 -1.429 1.00 16.18 C ATOM 280 OG1 THR 31 -8.222 40.702 -2.281 1.00 16.18 O ATOM 282 CG2 THR 31 -10.576 41.295 -2.127 1.00 16.18 C ATOM 283 C THR 31 -8.209 43.628 -2.174 1.00 16.18 C ATOM 284 O THR 31 -7.861 43.103 -3.241 1.00 16.18 O ATOM 285 N GLU 32 -8.113 44.948 -1.946 1.00 14.32 N ATOM 287 CA GLU 32 -7.532 45.930 -2.895 1.00 14.32 C ATOM 288 CB GLU 32 -8.438 47.148 -3.093 1.00 14.32 C ATOM 289 CG GLU 32 -9.570 46.910 -4.066 1.00 14.32 C ATOM 290 CD GLU 32 -10.456 48.130 -4.248 1.00 14.32 C ATOM 291 OE1 GLU 32 -11.443 48.268 -3.494 1.00 14.32 O ATOM 292 OE2 GLU 32 -10.167 48.949 -5.146 1.00 14.32 O ATOM 293 C GLU 32 -6.279 46.279 -2.093 1.00 14.32 C ATOM 294 O GLU 32 -6.212 47.313 -1.414 1.00 14.32 O ATOM 295 N ARG 33 -5.249 45.463 -2.321 1.00 12.74 N ATOM 297 CA ARG 33 -4.015 45.482 -1.542 1.00 12.74 C ATOM 298 CB ARG 33 -3.417 44.050 -1.582 1.00 12.74 C ATOM 299 CG ARG 33 -3.279 43.406 -2.997 1.00 12.74 C ATOM 300 CD ARG 33 -2.521 42.085 -2.975 1.00 12.74 C ATOM 301 NE ARG 33 -1.078 42.270 -2.799 1.00 12.74 N ATOM 303 CZ ARG 33 -0.144 41.377 -3.125 1.00 12.74 C ATOM 304 NH1 ARG 33 -0.468 40.201 -3.655 1.00 12.74 N ATOM 307 NH2 ARG 33 1.135 41.662 -2.917 1.00 12.74 N ATOM 310 C ARG 33 -2.830 46.468 -1.614 1.00 12.74 C ATOM 311 O ARG 33 -2.087 46.468 -2.606 1.00 12.74 O ATOM 312 N PRO 34 -2.681 47.372 -0.583 1.00 10.89 N ATOM 313 CD PRO 34 -3.740 47.944 0.287 1.00 10.89 C ATOM 314 CA PRO 34 -1.531 48.294 -0.564 1.00 10.89 C ATOM 315 CB PRO 34 -1.942 49.352 0.459 1.00 10.89 C ATOM 316 CG PRO 34 -3.382 49.432 0.289 1.00 10.89 C ATOM 317 C PRO 34 -0.473 47.326 0.026 1.00 10.89 C ATOM 318 O PRO 34 -0.861 46.306 0.614 1.00 10.89 O ATOM 319 N PHE 35 0.816 47.623 -0.062 1.00 9.74 N ATOM 321 CA PHE 35 1.799 46.655 0.424 1.00 9.74 C ATOM 322 CB PHE 35 2.944 46.565 -0.609 1.00 9.74 C ATOM 323 CG PHE 35 3.334 47.899 -1.237 1.00 9.74 C ATOM 324 CD1 PHE 35 2.731 48.337 -2.442 1.00 9.74 C ATOM 325 CD2 PHE 35 4.337 48.711 -0.653 1.00 9.74 C ATOM 326 CE1 PHE 35 3.118 49.559 -3.056 1.00 9.74 C ATOM 327 CE2 PHE 35 4.734 49.937 -1.256 1.00 9.74 C ATOM 328 CZ PHE 35 4.122 50.362 -2.460 1.00 9.74 C ATOM 329 C PHE 35 2.344 46.666 1.875 1.00 9.74 C ATOM 330 O PHE 35 3.490 46.283 2.098 1.00 9.74 O ATOM 331 N TRP 36 1.467 46.907 2.861 1.00 8.98 N ATOM 333 CA TRP 36 1.850 46.898 4.291 1.00 8.98 C ATOM 334 CB TRP 36 1.323 48.149 5.029 1.00 8.98 C ATOM 335 CG TRP 36 2.083 49.465 4.680 1.00 8.98 C ATOM 336 CD2 TRP 36 1.814 50.381 3.593 1.00 8.98 C ATOM 337 CE2 TRP 36 2.742 51.455 3.711 1.00 8.98 C ATOM 338 CE3 TRP 36 0.880 50.400 2.531 1.00 8.98 C ATOM 339 CD1 TRP 36 3.133 50.017 5.381 1.00 8.98 C ATOM 340 NE1 TRP 36 3.525 51.200 4.804 1.00 8.98 N ATOM 342 CZ2 TRP 36 2.768 52.544 2.805 1.00 8.98 C ATOM 343 CZ3 TRP 36 0.904 51.489 1.624 1.00 8.98 C ATOM 344 CH2 TRP 36 1.846 52.544 1.774 1.00 8.98 C ATOM 345 C TRP 36 1.430 45.542 4.920 1.00 8.98 C ATOM 346 O TRP 36 0.513 45.432 5.751 1.00 8.98 O ATOM 347 N ILE 37 2.185 44.533 4.477 1.00 8.51 N ATOM 349 CA ILE 37 2.082 43.081 4.762 1.00 8.51 C ATOM 350 CB ILE 37 2.984 42.297 3.730 1.00 8.51 C ATOM 351 CG2 ILE 37 2.374 42.396 2.318 1.00 8.51 C ATOM 352 CG1 ILE 37 4.450 42.797 3.791 1.00 8.51 C ATOM 353 CD1 ILE 37 5.518 41.732 3.508 1.00 8.51 C ATOM 354 C ILE 37 2.364 42.429 6.140 1.00 8.51 C ATOM 355 O ILE 37 2.271 41.199 6.247 1.00 8.51 O ATOM 356 N SER 38 2.597 43.201 7.199 1.00 8.91 N ATOM 358 CA SER 38 3.028 42.564 8.454 1.00 8.91 C ATOM 359 CB SER 38 3.622 43.646 9.363 1.00 8.91 C ATOM 360 OG SER 38 2.615 44.525 9.843 1.00 8.91 O ATOM 362 C SER 38 2.231 41.613 9.360 1.00 8.91 C ATOM 363 O SER 38 2.695 40.490 9.579 1.00 8.91 O ATOM 364 N SER 39 1.045 42.004 9.832 1.00 7.72 N ATOM 366 CA SER 39 0.285 41.160 10.764 1.00 7.72 C ATOM 367 CB SER 39 -0.045 41.995 11.998 1.00 7.72 C ATOM 368 OG SER 39 -0.719 43.179 11.617 1.00 7.72 O ATOM 370 C SER 39 -0.947 40.332 10.434 1.00 7.72 C ATOM 371 O SER 39 -1.014 39.136 10.739 1.00 7.72 O ATOM 372 N PHE 40 -1.892 41.000 9.774 1.00 6.36 N ATOM 374 CA PHE 40 -3.235 40.499 9.490 1.00 6.36 C ATOM 375 CB PHE 40 -4.277 41.304 10.320 1.00 6.36 C ATOM 376 CG PHE 40 -3.978 41.386 11.820 1.00 6.36 C ATOM 377 CD1 PHE 40 -3.625 42.625 12.399 1.00 6.36 C ATOM 378 CD2 PHE 40 -4.073 40.252 12.664 1.00 6.36 C ATOM 379 CE1 PHE 40 -3.369 42.740 13.795 1.00 6.36 C ATOM 380 CE2 PHE 40 -3.821 40.351 14.061 1.00 6.36 C ATOM 381 CZ PHE 40 -3.468 41.599 14.626 1.00 6.36 C ATOM 382 C PHE 40 -3.833 40.082 8.125 1.00 6.36 C ATOM 383 O PHE 40 -4.559 40.860 7.514 1.00 6.36 O ATOM 384 N ILE 41 -3.705 38.810 7.752 1.00 5.43 N ATOM 386 CA ILE 41 -4.146 38.286 6.432 1.00 5.43 C ATOM 387 CB ILE 41 -3.753 36.776 6.325 1.00 5.43 C ATOM 388 CG2 ILE 41 -2.222 36.620 6.448 1.00 5.43 C ATOM 389 CG1 ILE 41 -4.494 35.947 7.404 1.00 5.43 C ATOM 390 CD1 ILE 41 -4.894 34.528 6.976 1.00 5.43 C ATOM 391 C ILE 41 -5.593 38.370 5.847 1.00 5.43 C ATOM 392 O ILE 41 -6.593 38.141 6.550 1.00 5.43 O ATOM 393 N GLY 42 -5.622 38.930 4.625 1.00 5.20 N ATOM 395 CA GLY 42 -6.772 39.078 3.719 1.00 5.20 C ATOM 396 C GLY 42 -8.263 39.007 3.948 1.00 5.20 C ATOM 397 O GLY 42 -9.023 39.515 3.127 1.00 5.20 O ATOM 398 N ARG 43 -8.654 38.516 5.115 1.00 4.41 N ATOM 400 CA ARG 43 -10.033 38.285 5.519 1.00 4.41 C ATOM 401 CB ARG 43 -10.232 36.932 6.171 1.00 4.41 C ATOM 402 CG ARG 43 -10.482 35.842 5.156 1.00 4.41 C ATOM 403 CD ARG 43 -10.822 34.492 5.790 1.00 4.41 C ATOM 404 NE ARG 43 -12.133 34.483 6.446 1.00 4.41 N ATOM 406 CZ ARG 43 -12.671 33.438 7.074 1.00 4.41 C ATOM 407 NH1 ARG 43 -13.869 33.556 7.631 1.00 4.41 N ATOM 410 NH2 ARG 43 -12.028 32.277 7.155 1.00 4.41 N ATOM 413 C ARG 43 -10.976 39.380 5.981 1.00 4.41 C ATOM 414 O ARG 43 -10.712 40.540 5.719 1.00 4.41 O ATOM 415 N SER 44 -12.065 39.001 6.653 1.00 3.95 N ATOM 417 CA SER 44 -13.186 39.861 7.008 1.00 3.95 C ATOM 418 CB SER 44 -14.286 38.986 7.577 1.00 3.95 C ATOM 419 OG SER 44 -13.840 38.415 8.790 1.00 3.95 O ATOM 421 C SER 44 -13.060 41.071 7.918 1.00 3.95 C ATOM 422 O SER 44 -11.985 41.537 8.233 1.00 3.95 O ATOM 423 N LYS 45 -14.240 41.583 8.237 1.00 3.89 N ATOM 425 CA LYS 45 -14.530 42.843 8.883 1.00 3.89 C ATOM 426 CG LYS 45 -16.892 41.878 8.243 1.00 3.89 C ATOM 427 CD LYS 45 -18.397 42.179 8.424 1.00 3.89 C ATOM 428 CE LYS 45 -19.139 42.538 7.123 1.00 3.89 C ATOM 429 NZ LYS 45 -18.790 43.899 6.626 1.00 3.89 N ATOM 433 C LYS 45 -14.434 43.373 10.328 1.00 3.89 C ATOM 434 O LYS 45 -14.503 44.592 10.487 1.00 3.89 O ATOM 435 CB LYS 45 -15.962 43.145 8.402 1.00 3.89 C TER END