####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS497_5-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS497_5-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 16 - 40 4.91 8.95 LCS_AVERAGE: 54.18 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 29 - 37 1.98 10.53 LCS_AVERAGE: 15.65 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 20 - 27 0.94 13.02 LCS_AVERAGE: 11.62 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 24 3 3 3 8 10 12 15 20 22 24 25 27 30 32 34 37 38 38 39 39 LCS_GDT V 3 V 3 5 5 24 3 4 5 6 9 10 14 17 20 24 25 27 30 32 34 37 38 38 39 39 LCS_GDT Q 4 Q 4 5 5 24 3 4 5 6 7 9 13 15 19 22 25 27 30 32 34 37 38 38 39 39 LCS_GDT G 5 G 5 5 5 24 3 4 5 6 7 8 11 14 17 19 21 24 27 30 34 35 38 38 39 39 LCS_GDT P 6 P 6 5 5 24 1 4 5 6 7 8 9 10 11 12 16 18 20 20 25 25 30 31 35 36 LCS_GDT W 7 W 7 5 5 24 2 4 5 6 7 8 9 11 15 17 17 18 20 22 23 34 36 38 39 39 LCS_GDT V 8 V 8 3 5 24 3 3 3 5 5 8 11 15 16 19 25 27 29 32 34 37 38 38 39 39 LCS_GDT G 9 G 9 3 6 24 3 3 4 5 7 9 12 17 22 24 25 27 30 32 34 37 38 38 39 39 LCS_GDT S 10 S 10 5 6 24 3 4 5 5 7 12 15 20 22 24 25 27 30 32 34 37 38 38 39 39 LCS_GDT S 11 S 11 5 6 24 3 4 5 5 10 12 15 20 22 24 25 27 30 32 34 37 38 38 39 39 LCS_GDT Y 12 Y 12 5 6 24 3 4 5 7 8 12 15 20 22 24 25 27 30 32 34 37 38 38 39 39 LCS_GDT V 13 V 13 5 6 24 3 4 5 8 9 11 15 20 22 24 25 27 30 32 34 37 38 38 39 39 LCS_GDT A 14 A 14 5 6 24 4 4 6 8 10 12 15 20 22 24 25 27 30 32 34 37 38 38 39 39 LCS_GDT E 15 E 15 5 6 24 4 4 5 5 6 8 12 17 22 23 25 27 30 32 34 37 38 38 39 39 LCS_GDT T 16 T 16 5 6 25 4 4 5 5 7 12 15 20 22 24 25 27 30 32 34 37 38 38 39 39 LCS_GDT G 17 G 17 5 6 25 4 4 6 8 10 12 15 20 22 24 25 27 30 32 34 37 38 38 39 39 LCS_GDT Q 18 Q 18 4 6 25 3 3 4 8 10 12 15 20 22 24 25 27 30 32 34 37 38 38 39 39 LCS_GDT N 19 N 19 4 6 25 3 3 5 8 10 12 15 20 22 24 25 27 30 32 34 37 38 38 39 39 LCS_GDT W 20 W 20 8 8 25 6 7 7 8 8 10 13 17 22 24 25 27 29 32 34 37 38 38 39 39 LCS_GDT A 21 A 21 8 8 25 6 7 7 8 8 10 13 17 22 24 25 27 28 32 34 37 38 38 39 39 LCS_GDT S 22 S 22 8 8 25 6 7 7 8 8 10 15 20 22 24 25 27 30 32 34 37 38 38 39 39 LCS_GDT L 23 L 23 8 8 25 6 7 7 8 10 12 15 20 22 24 25 27 30 32 34 37 38 38 39 39 LCS_GDT A 24 A 24 8 8 25 6 7 7 8 8 10 15 20 22 24 25 27 30 32 34 37 38 38 39 39 LCS_GDT A 25 A 25 8 8 25 6 7 7 8 10 12 15 20 22 24 25 27 30 32 34 37 38 38 39 39 LCS_GDT N 26 N 26 8 8 25 3 7 7 8 8 10 13 16 19 22 25 27 30 32 34 37 38 38 39 39 LCS_GDT E 27 E 27 8 8 25 3 4 5 8 8 10 13 14 17 19 25 27 30 32 34 37 38 38 39 39 LCS_GDT L 28 L 28 4 8 25 3 4 5 5 6 9 11 13 14 18 21 24 27 32 34 37 38 38 39 39 LCS_GDT R 29 R 29 5 9 25 3 4 5 7 8 9 11 13 16 18 20 24 27 32 34 37 38 38 39 39 LCS_GDT V 30 V 30 5 9 25 3 5 5 7 8 9 11 13 16 18 22 27 29 32 34 37 38 38 39 39 LCS_GDT T 31 T 31 5 9 25 3 5 5 7 8 9 12 13 17 19 21 27 28 32 34 37 38 38 39 39 LCS_GDT E 32 E 32 5 9 25 3 5 5 7 8 10 13 14 17 21 25 27 30 32 34 37 38 38 39 39 LCS_GDT R 33 R 33 5 9 25 3 5 5 7 8 10 13 14 19 22 25 27 30 32 34 37 38 38 39 39 LCS_GDT P 34 P 34 4 9 25 3 4 5 5 6 10 13 14 19 22 25 27 30 32 34 37 38 38 39 39 LCS_GDT F 35 F 35 4 9 25 3 5 6 8 10 12 15 20 22 24 25 27 30 32 34 37 38 38 39 39 LCS_GDT W 36 W 36 5 9 25 3 5 5 7 8 12 15 20 22 24 25 27 30 32 34 37 38 38 39 39 LCS_GDT I 37 I 37 5 9 25 4 5 6 8 10 12 15 20 22 24 25 27 30 32 34 37 38 38 39 39 LCS_GDT S 38 S 38 5 7 25 4 5 5 8 10 12 15 20 22 24 25 27 30 32 34 37 38 38 39 39 LCS_GDT S 39 S 39 5 7 25 4 5 6 8 10 12 15 20 22 24 25 27 30 32 34 37 38 38 39 39 LCS_GDT F 40 F 40 5 7 25 4 5 5 7 7 10 15 20 22 24 25 27 30 32 34 37 38 38 39 39 LCS_GDT I 41 I 41 5 7 24 3 4 5 7 7 10 12 17 22 24 25 27 30 32 34 37 38 38 39 39 LCS_GDT G 42 G 42 3 7 16 3 3 4 4 5 6 7 8 12 13 18 22 24 30 32 34 36 37 38 38 LCS_GDT R 43 R 43 3 5 16 3 3 4 4 5 6 7 8 9 11 13 14 15 16 18 25 27 33 37 38 LCS_GDT S 44 S 44 3 5 16 3 3 4 4 5 6 7 8 9 11 13 14 15 15 15 15 18 22 23 24 LCS_GDT K 45 K 45 3 5 16 3 3 4 4 5 6 7 8 9 11 13 14 15 15 15 15 17 18 19 21 LCS_AVERAGE LCS_A: 27.15 ( 11.62 15.65 54.18 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 7 7 8 10 12 15 20 22 24 25 27 30 32 34 37 38 38 39 39 GDT PERCENT_AT 13.64 15.91 15.91 18.18 22.73 27.27 34.09 45.45 50.00 54.55 56.82 61.36 68.18 72.73 77.27 84.09 86.36 86.36 88.64 88.64 GDT RMS_LOCAL 0.24 0.45 0.45 0.94 1.62 1.88 2.38 2.87 3.12 3.33 3.42 3.74 4.45 4.65 4.94 5.44 5.64 5.64 5.83 5.83 GDT RMS_ALL_AT 12.16 12.29 12.29 13.02 9.17 9.28 9.36 9.44 9.50 9.59 9.66 9.62 8.57 8.62 8.51 8.33 8.35 8.35 8.36 8.36 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 32 E 32 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 3.275 0 0.152 0.191 6.000 11.818 9.455 - LGA V 3 V 3 5.840 0 0.596 1.338 8.191 4.545 2.597 6.854 LGA Q 4 Q 4 9.264 0 0.143 0.517 11.416 0.000 0.000 10.714 LGA G 5 G 5 14.345 0 0.137 0.137 15.955 0.000 0.000 - LGA P 6 P 6 17.921 0 0.050 0.200 20.304 0.000 0.000 20.304 LGA W 7 W 7 13.398 0 0.338 0.314 17.294 0.000 0.000 15.595 LGA V 8 V 8 7.430 0 0.667 1.385 9.427 1.364 0.779 5.396 LGA G 9 G 9 5.350 0 0.547 0.547 6.526 7.273 7.273 - LGA S 10 S 10 3.251 0 0.498 0.735 5.414 26.364 17.576 5.113 LGA S 11 S 11 2.737 0 0.047 0.043 5.206 29.091 21.212 5.206 LGA Y 12 Y 12 3.624 0 0.088 1.171 12.749 15.455 5.606 12.749 LGA V 13 V 13 3.587 0 0.598 0.625 7.319 26.818 15.325 6.482 LGA A 14 A 14 1.244 0 0.041 0.039 3.646 42.273 44.000 - LGA E 15 E 15 5.131 0 0.061 1.162 8.805 3.182 1.414 8.805 LGA T 16 T 16 3.643 0 0.117 0.221 5.743 21.818 14.805 3.772 LGA G 17 G 17 0.978 0 0.575 0.575 3.047 57.727 57.727 - LGA Q 18 Q 18 2.726 0 0.602 1.276 10.444 56.364 25.051 9.497 LGA N 19 N 19 2.010 0 0.060 1.098 5.264 39.545 23.864 5.264 LGA W 20 W 20 5.794 0 0.630 0.461 13.466 3.182 0.909 13.466 LGA A 21 A 21 5.922 0 0.077 0.077 7.507 5.909 4.727 - LGA S 22 S 22 3.725 0 0.020 0.622 6.573 26.364 17.576 6.573 LGA L 23 L 23 1.115 0 0.017 0.510 3.821 45.000 59.545 0.834 LGA A 24 A 24 4.105 0 0.037 0.040 5.147 11.364 9.091 - LGA A 25 A 25 1.557 0 0.061 0.061 4.524 30.455 40.727 - LGA N 26 N 26 6.620 0 0.076 0.748 9.643 1.364 0.682 7.449 LGA E 27 E 27 10.151 0 0.169 1.399 15.939 0.000 0.000 14.011 LGA L 28 L 28 13.245 0 0.493 0.478 17.245 0.000 0.000 16.619 LGA R 29 R 29 13.782 0 0.543 1.530 23.439 0.000 0.000 23.439 LGA V 30 V 30 11.934 0 0.129 0.980 13.242 0.000 0.000 8.792 LGA T 31 T 31 15.024 0 0.080 1.049 18.754 0.000 0.000 18.754 LGA E 32 E 32 11.798 0 0.423 1.168 12.703 0.000 0.000 12.131 LGA R 33 R 33 10.750 0 0.643 1.443 16.462 0.000 0.000 16.462 LGA P 34 P 34 7.749 0 0.102 0.123 12.033 0.000 0.000 10.834 LGA F 35 F 35 2.711 0 0.628 1.224 9.180 25.000 11.736 9.180 LGA W 36 W 36 3.893 0 0.650 1.121 11.436 23.182 6.623 11.296 LGA I 37 I 37 1.441 0 0.135 0.251 3.194 63.636 57.273 3.194 LGA S 38 S 38 2.349 0 0.070 0.628 3.640 44.091 35.758 2.783 LGA S 39 S 39 1.766 0 0.201 0.214 4.088 33.636 50.000 1.159 LGA F 40 F 40 3.848 0 0.136 0.963 10.687 10.000 4.628 10.687 LGA I 41 I 41 4.991 0 0.600 1.052 7.781 3.182 4.318 4.438 LGA G 42 G 42 11.484 0 0.269 0.269 15.712 0.000 0.000 - LGA R 43 R 43 15.343 0 0.524 1.174 20.493 0.000 0.000 20.493 LGA S 44 S 44 20.907 0 0.072 0.607 23.155 0.000 0.000 21.118 LGA K 45 K 45 26.904 0 0.693 0.723 30.757 0.000 0.000 30.757 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 8.027 8.067 9.566 15.227 12.506 5.974 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 20 2.87 40.909 33.797 0.674 LGA_LOCAL RMSD: 2.867 Number of atoms: 20 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 9.436 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 8.027 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.858898 * X + 0.204673 * Y + -0.469471 * Z + 14.300721 Y_new = 0.474174 * X + -0.664188 * Y + 0.577939 * Z + 50.891174 Z_new = -0.193528 * X + -0.719002 * Y + -0.667520 * Z + 10.558490 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.504433 0.194757 -2.319082 [DEG: 28.9019 11.1587 -132.8736 ] ZXZ: -2.459385 2.301670 -2.878662 [DEG: -140.9124 131.8760 -164.9352 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS497_5-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS497_5-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 20 2.87 33.797 8.03 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS497_5-D1 PFRMAT TS TARGET T0953s2 MODEL 5 PARENT N/A ATOM 12 N ALA 2 9.127 33.295 14.379 1.00 6.03 N ATOM 14 CA ALA 2 8.315 34.394 14.928 1.00 6.03 C ATOM 15 CB ALA 2 7.208 33.820 15.822 1.00 6.03 C ATOM 16 C ALA 2 9.158 35.432 15.699 1.00 6.03 C ATOM 17 O ALA 2 9.848 35.075 16.666 1.00 6.03 O ATOM 18 N VAL 3 9.123 36.695 15.241 1.00 5.01 N ATOM 20 CA VAL 3 9.872 37.820 15.848 1.00 5.01 C ATOM 21 CB VAL 3 11.132 38.241 14.939 1.00 5.01 C ATOM 22 CG1 VAL 3 10.709 38.875 13.603 1.00 5.01 C ATOM 23 CG2 VAL 3 12.122 39.128 15.711 1.00 5.01 C ATOM 24 C VAL 3 8.992 39.037 16.276 1.00 5.01 C ATOM 25 O VAL 3 9.097 39.482 17.426 1.00 5.01 O ATOM 26 N GLN 4 8.150 39.550 15.363 1.00 4.73 N ATOM 28 CA GLN 4 7.281 40.724 15.619 1.00 4.73 C ATOM 29 CB GLN 4 7.574 41.853 14.609 1.00 4.73 C ATOM 30 CG GLN 4 8.903 42.564 14.818 1.00 4.73 C ATOM 31 CD GLN 4 9.054 43.788 13.937 1.00 4.73 C ATOM 32 OE1 GLN 4 9.559 43.704 12.818 1.00 4.73 O ATOM 33 NE2 GLN 4 8.616 44.938 14.438 1.00 4.73 N ATOM 36 C GLN 4 5.760 40.497 15.677 1.00 4.73 C ATOM 37 O GLN 4 5.176 39.878 14.778 1.00 4.73 O ATOM 38 N GLY 5 5.139 41.011 16.749 1.00 5.30 N ATOM 40 CA GLY 5 3.692 40.942 16.968 1.00 5.30 C ATOM 41 C GLY 5 2.969 39.603 17.135 1.00 5.30 C ATOM 42 O GLY 5 3.652 38.584 17.298 1.00 5.30 O ATOM 43 N PRO 6 1.598 39.560 17.102 1.00 6.81 N ATOM 44 CD PRO 6 0.713 40.748 17.070 1.00 6.81 C ATOM 45 CA PRO 6 0.776 38.336 17.245 1.00 6.81 C ATOM 46 CB PRO 6 -0.665 38.869 17.165 1.00 6.81 C ATOM 47 CG PRO 6 -0.541 40.204 16.469 1.00 6.81 C ATOM 48 C PRO 6 1.046 37.233 16.193 1.00 6.81 C ATOM 49 O PRO 6 0.700 36.064 16.400 1.00 6.81 O ATOM 50 N TRP 7 1.679 37.646 15.084 1.00 7.51 N ATOM 52 CA TRP 7 2.085 36.810 13.933 1.00 7.51 C ATOM 53 CB TRP 7 3.262 35.869 14.288 1.00 7.51 C ATOM 54 CG TRP 7 4.638 36.531 14.167 1.00 7.51 C ATOM 55 CD2 TRP 7 5.309 36.958 12.958 1.00 7.51 C ATOM 56 CE2 TRP 7 6.557 37.508 13.348 1.00 7.51 C ATOM 57 CE3 TRP 7 4.975 36.932 11.583 1.00 7.51 C ATOM 58 CD1 TRP 7 5.487 36.834 15.196 1.00 7.51 C ATOM 59 NE1 TRP 7 6.632 37.417 14.713 1.00 7.51 N ATOM 61 CZ2 TRP 7 7.482 38.034 12.417 1.00 7.51 C ATOM 62 CZ3 TRP 7 5.897 37.458 10.651 1.00 7.51 C ATOM 63 CH2 TRP 7 7.136 38.000 11.080 1.00 7.51 C ATOM 64 C TRP 7 1.098 36.082 13.018 1.00 7.51 C ATOM 65 O TRP 7 0.044 35.623 13.459 1.00 7.51 O ATOM 66 N VAL 8 1.478 36.022 11.733 1.00 6.58 N ATOM 68 CA VAL 8 0.747 35.375 10.628 1.00 6.58 C ATOM 69 CB VAL 8 0.607 36.333 9.386 1.00 6.58 C ATOM 70 CG1 VAL 8 -0.515 37.322 9.630 1.00 6.58 C ATOM 71 CG2 VAL 8 1.931 37.081 9.105 1.00 6.58 C ATOM 72 C VAL 8 1.522 34.102 10.235 1.00 6.58 C ATOM 73 O VAL 8 2.757 34.111 10.240 1.00 6.58 O ATOM 74 N GLY 9 0.803 33.036 9.881 1.00 6.53 N ATOM 76 CA GLY 9 1.454 31.783 9.527 1.00 6.53 C ATOM 77 C GLY 9 1.437 31.380 8.065 1.00 6.53 C ATOM 78 O GLY 9 0.549 30.642 7.624 1.00 6.53 O ATOM 79 N SER 10 2.430 31.889 7.327 1.00 6.07 N ATOM 81 CA SER 10 2.647 31.620 5.899 1.00 6.07 C ATOM 82 CB SER 10 2.382 32.890 5.062 1.00 6.07 C ATOM 83 OG SER 10 2.493 32.631 3.672 1.00 6.07 O ATOM 85 C SER 10 4.122 31.160 5.820 1.00 6.07 C ATOM 86 O SER 10 4.474 30.167 6.469 1.00 6.07 O ATOM 87 N SER 11 4.966 31.857 5.044 1.00 6.95 N ATOM 89 CA SER 11 6.403 31.555 4.898 1.00 6.95 C ATOM 90 OG SER 11 8.317 31.909 3.414 1.00 6.95 O ATOM 92 C SER 11 7.194 31.879 6.183 1.00 6.95 C ATOM 93 O SER 11 8.133 31.154 6.534 1.00 6.95 O ATOM 94 CB SER 11 6.994 32.329 3.713 1.00 6.95 C ATOM 95 N TYR 12 6.794 32.967 6.860 1.00 7.45 N ATOM 97 CA TYR 12 7.425 33.469 8.099 1.00 7.45 C ATOM 98 CB TYR 12 6.973 34.920 8.379 1.00 7.45 C ATOM 99 CG TYR 12 7.390 35.974 7.344 1.00 7.45 C ATOM 100 CD1 TYR 12 6.571 36.265 6.224 1.00 7.45 C ATOM 101 CE1 TYR 12 6.943 37.257 5.276 1.00 7.45 C ATOM 102 CD2 TYR 12 8.594 36.707 7.492 1.00 7.45 C ATOM 103 CE2 TYR 12 8.972 37.702 6.548 1.00 7.45 C ATOM 104 CZ TYR 12 8.142 37.967 5.448 1.00 7.45 C ATOM 105 OH TYR 12 8.502 38.928 4.529 1.00 7.45 O ATOM 107 C TYR 12 7.282 32.622 9.376 1.00 7.45 C ATOM 108 O TYR 12 8.285 32.404 10.059 1.00 7.45 O ATOM 109 N VAL 13 6.062 32.153 9.688 1.00 6.39 N ATOM 111 CA VAL 13 5.803 31.319 10.887 1.00 6.39 C ATOM 112 CB VAL 13 4.704 31.959 11.841 1.00 6.39 C ATOM 113 CG1 VAL 13 4.563 31.165 13.149 1.00 6.39 C ATOM 114 CG2 VAL 13 5.077 33.397 12.182 1.00 6.39 C ATOM 115 C VAL 13 5.390 29.903 10.431 1.00 6.39 C ATOM 116 O VAL 13 4.458 29.743 9.626 1.00 6.39 O ATOM 117 N ALA 14 6.136 28.900 10.914 1.00 5.65 N ATOM 119 CA ALA 14 5.909 27.480 10.601 1.00 5.65 C ATOM 120 CB ALA 14 6.904 27.011 9.550 1.00 5.65 C ATOM 121 C ALA 14 5.926 26.531 11.810 1.00 5.65 C ATOM 122 O ALA 14 5.046 25.671 11.931 1.00 5.65 O ATOM 123 N GLU 15 6.925 26.703 12.694 1.00 5.55 N ATOM 125 CA GLU 15 7.148 25.862 13.898 1.00 5.55 C ATOM 126 CB GLU 15 8.509 26.186 14.531 1.00 5.55 C ATOM 127 CG GLU 15 9.719 25.754 13.706 1.00 5.55 C ATOM 128 CD GLU 15 11.038 26.095 14.376 1.00 5.55 C ATOM 129 OE1 GLU 15 11.561 27.202 14.132 1.00 5.55 O ATOM 130 OE2 GLU 15 11.552 25.253 15.143 1.00 5.55 O ATOM 131 C GLU 15 6.061 25.853 14.991 1.00 5.55 C ATOM 132 O GLU 15 5.681 24.773 15.459 1.00 5.55 O ATOM 133 N THR 16 5.574 27.039 15.388 1.00 6.28 N ATOM 135 CA THR 16 4.518 27.195 16.414 1.00 6.28 C ATOM 136 CB THR 16 4.391 28.669 16.909 1.00 6.28 C ATOM 137 OG1 THR 16 4.262 29.550 15.787 1.00 6.28 O ATOM 139 CG2 THR 16 5.607 29.070 17.736 1.00 6.28 C ATOM 140 C THR 16 3.155 26.690 15.903 1.00 6.28 C ATOM 141 O THR 16 2.375 26.092 16.658 1.00 6.28 O ATOM 142 N GLY 17 2.913 26.921 14.610 1.00 6.34 N ATOM 144 CA GLY 17 1.681 26.521 13.949 1.00 6.34 C ATOM 145 C GLY 17 1.298 27.597 12.955 1.00 6.34 C ATOM 146 O GLY 17 1.082 28.743 13.362 1.00 6.34 O ATOM 147 N GLN 18 1.221 27.241 11.666 1.00 5.57 N ATOM 149 CA GLN 18 0.865 28.186 10.588 1.00 5.57 C ATOM 150 CB GLN 18 1.198 27.604 9.198 1.00 5.57 C ATOM 151 CG GLN 18 0.747 26.153 8.915 1.00 5.57 C ATOM 152 CD GLN 18 1.129 25.684 7.524 1.00 5.57 C ATOM 153 OE1 GLN 18 2.202 25.116 7.321 1.00 5.57 O ATOM 154 NE2 GLN 18 0.250 25.921 6.556 1.00 5.57 N ATOM 157 C GLN 18 -0.594 28.684 10.660 1.00 5.57 C ATOM 158 O GLN 18 -0.841 29.898 10.616 1.00 5.57 O ATOM 159 N ASN 19 -1.534 27.743 10.821 1.00 5.89 N ATOM 161 CA ASN 19 -2.972 28.035 10.960 1.00 5.89 C ATOM 162 CB ASN 19 -3.804 26.750 10.843 1.00 5.89 C ATOM 163 CG ASN 19 -5.226 26.998 10.336 1.00 5.89 C ATOM 164 OD1 ASN 19 -6.149 27.226 11.121 1.00 5.89 O ATOM 165 ND2 ASN 19 -5.405 26.936 9.019 1.00 5.89 N ATOM 168 C ASN 19 -3.163 28.690 12.341 1.00 5.89 C ATOM 169 O ASN 19 -3.956 29.626 12.482 1.00 5.89 O ATOM 170 N TRP 20 -2.379 28.210 13.323 1.00 4.94 N ATOM 172 CA TRP 20 -2.378 28.687 14.723 1.00 4.94 C ATOM 173 CB TRP 20 -1.489 27.782 15.603 1.00 4.94 C ATOM 174 CG TRP 20 -1.969 26.320 15.774 1.00 4.94 C ATOM 175 CD2 TRP 20 -2.871 25.800 16.779 1.00 4.94 C ATOM 176 CE2 TRP 20 -2.979 24.397 16.557 1.00 4.94 C ATOM 177 CE3 TRP 20 -3.597 26.380 17.845 1.00 4.94 C ATOM 178 CD1 TRP 20 -1.589 25.235 15.015 1.00 4.94 C ATOM 179 NE1 TRP 20 -2.189 24.090 15.482 1.00 4.94 N ATOM 181 CZ2 TRP 20 -3.787 23.558 17.363 1.00 4.94 C ATOM 182 CZ3 TRP 20 -4.407 25.543 18.654 1.00 4.94 C ATOM 183 CH2 TRP 20 -4.489 24.144 18.400 1.00 4.94 C ATOM 184 C TRP 20 -1.908 30.145 14.848 1.00 4.94 C ATOM 185 O TRP 20 -2.458 30.903 15.654 1.00 4.94 O ATOM 186 N ALA 21 -0.897 30.517 14.045 1.00 5.35 N ATOM 188 CA ALA 21 -0.328 31.878 13.998 1.00 5.35 C ATOM 189 CB ALA 21 0.965 31.892 13.187 1.00 5.35 C ATOM 190 C ALA 21 -1.358 32.838 13.385 1.00 5.35 C ATOM 191 O ALA 21 -1.605 33.916 13.930 1.00 5.35 O ATOM 192 N SER 22 -2.013 32.380 12.305 1.00 5.76 N ATOM 194 CA SER 22 -3.052 33.135 11.575 1.00 5.76 C ATOM 195 CB SER 22 -3.400 32.421 10.264 1.00 5.76 C ATOM 196 OG SER 22 -2.263 32.307 9.425 1.00 5.76 O ATOM 198 C SER 22 -4.307 33.310 12.458 1.00 5.76 C ATOM 199 O SER 22 -4.942 34.373 12.432 1.00 5.76 O ATOM 200 N LEU 23 -4.622 32.267 13.245 1.00 5.59 N ATOM 202 CA LEU 23 -5.746 32.229 14.210 1.00 5.59 C ATOM 203 CB LEU 23 -5.938 30.808 14.779 1.00 5.59 C ATOM 204 CG LEU 23 -6.849 29.742 14.141 1.00 5.59 C ATOM 205 CD1 LEU 23 -6.183 28.381 14.256 1.00 5.59 C ATOM 206 CD2 LEU 23 -8.230 29.691 14.812 1.00 5.59 C ATOM 207 C LEU 23 -5.445 33.187 15.372 1.00 5.59 C ATOM 208 O LEU 23 -6.350 33.830 15.913 1.00 5.59 O ATOM 209 N ALA 24 -4.156 33.253 15.735 1.00 6.31 N ATOM 211 CA ALA 24 -3.622 34.095 16.818 1.00 6.31 C ATOM 212 CB ALA 24 -2.160 33.706 17.096 1.00 6.31 C ATOM 213 C ALA 24 -3.728 35.595 16.494 1.00 6.31 C ATOM 214 O ALA 24 -4.170 36.376 17.344 1.00 6.31 O ATOM 215 N ALA 25 -3.321 35.981 15.273 1.00 6.16 N ATOM 217 CA ALA 25 -3.367 37.379 14.808 1.00 6.16 C ATOM 218 CB ALA 25 -2.431 37.559 13.609 1.00 6.16 C ATOM 219 C ALA 25 -4.760 37.958 14.480 1.00 6.16 C ATOM 220 O ALA 25 -5.144 38.976 15.064 1.00 6.16 O ATOM 221 N ASN 26 -5.522 37.279 13.609 1.00 6.29 N ATOM 223 CA ASN 26 -6.878 37.704 13.186 1.00 6.29 C ATOM 224 CB ASN 26 -7.246 37.049 11.843 1.00 6.29 C ATOM 225 CG ASN 26 -6.437 37.596 10.677 1.00 6.29 C ATOM 226 OD1 ASN 26 -5.299 37.185 10.445 1.00 6.29 O ATOM 227 ND2 ASN 26 -7.028 38.522 9.931 1.00 6.29 N ATOM 230 C ASN 26 -8.031 37.507 14.188 1.00 6.29 C ATOM 231 O ASN 26 -8.762 38.459 14.487 1.00 6.29 O ATOM 232 N GLU 27 -8.120 36.277 14.722 1.00 6.95 N ATOM 234 CA GLU 27 -9.113 35.738 15.693 1.00 6.95 C ATOM 235 CG GLU 27 -11.295 36.426 16.943 1.00 6.95 C ATOM 236 CD GLU 27 -12.638 37.122 16.817 1.00 6.95 C ATOM 237 OE1 GLU 27 -12.700 38.346 17.060 1.00 6.95 O ATOM 238 OE2 GLU 27 -13.631 36.445 16.478 1.00 6.95 O ATOM 239 C GLU 27 -9.246 34.273 15.225 1.00 6.95 C ATOM 240 O GLU 27 -9.111 33.345 16.032 1.00 6.95 O ATOM 241 CB GLU 27 -10.498 36.436 15.631 1.00 6.95 C ATOM 242 N LEU 28 -9.512 34.099 13.918 1.00 8.30 N ATOM 244 CA LEU 28 -9.651 32.797 13.229 1.00 8.30 C ATOM 245 CB LEU 28 -11.113 32.274 13.239 1.00 8.30 C ATOM 246 CG LEU 28 -11.791 31.723 14.507 1.00 8.30 C ATOM 247 CD1 LEU 28 -13.187 32.317 14.628 1.00 8.30 C ATOM 248 CD2 LEU 28 -11.859 30.189 14.498 1.00 8.30 C ATOM 249 C LEU 28 -9.156 32.934 11.775 1.00 8.30 C ATOM 250 O LEU 28 -9.835 33.543 10.934 1.00 8.30 O ATOM 251 N ARG 29 -7.951 32.397 11.506 1.00 8.47 N ATOM 253 CA ARG 29 -7.249 32.386 10.189 1.00 8.47 C ATOM 254 CB ARG 29 -7.830 31.303 9.252 1.00 8.47 C ATOM 255 CG ARG 29 -7.577 29.863 9.704 1.00 8.47 C ATOM 256 CD ARG 29 -8.188 28.841 8.747 1.00 8.47 C ATOM 257 NE ARG 29 -7.502 28.790 7.453 1.00 8.47 N ATOM 259 CZ ARG 29 -7.832 27.988 6.439 1.00 8.47 C ATOM 260 NH1 ARG 29 -7.132 28.035 5.313 1.00 8.47 N ATOM 263 NH2 ARG 29 -8.852 27.141 6.534 1.00 8.47 N ATOM 266 C ARG 29 -7.100 33.722 9.417 1.00 8.47 C ATOM 267 O ARG 29 -7.835 34.680 9.684 1.00 8.47 O ATOM 268 N VAL 30 -6.137 33.769 8.480 1.00 7.80 N ATOM 270 CA VAL 30 -5.857 34.946 7.625 1.00 7.80 C ATOM 271 CB VAL 30 -4.315 35.070 7.257 1.00 7.80 C ATOM 272 CG1 VAL 30 -3.536 35.613 8.439 1.00 7.80 C ATOM 273 CG2 VAL 30 -3.716 33.718 6.805 1.00 7.80 C ATOM 274 C VAL 30 -6.773 34.950 6.368 1.00 7.80 C ATOM 275 O VAL 30 -6.475 34.289 5.359 1.00 7.80 O ATOM 276 N THR 31 -7.915 35.647 6.479 1.00 6.56 N ATOM 278 CA THR 31 -8.935 35.740 5.413 1.00 6.56 C ATOM 279 CB THR 31 -10.287 35.016 5.852 1.00 6.56 C ATOM 280 OG1 THR 31 -11.285 35.169 4.833 1.00 6.56 O ATOM 282 CG2 THR 31 -10.826 35.546 7.200 1.00 6.56 C ATOM 283 C THR 31 -9.215 37.154 4.842 1.00 6.56 C ATOM 284 O THR 31 -9.586 37.277 3.664 1.00 6.56 O ATOM 285 N GLU 32 -9.005 38.200 5.656 1.00 7.43 N ATOM 287 CA GLU 32 -9.248 39.616 5.280 1.00 7.43 C ATOM 288 CB GLU 32 -9.108 40.530 6.510 1.00 7.43 C ATOM 289 CG GLU 32 -10.203 40.362 7.560 1.00 7.43 C ATOM 290 CD GLU 32 -10.021 41.283 8.752 1.00 7.43 C ATOM 291 OE1 GLU 32 -10.549 42.414 8.719 1.00 7.43 O ATOM 292 OE2 GLU 32 -9.349 40.875 9.724 1.00 7.43 O ATOM 293 C GLU 32 -8.430 40.149 4.072 1.00 7.43 C ATOM 294 O GLU 32 -8.799 39.861 2.927 1.00 7.43 O ATOM 295 N ARG 33 -7.348 40.907 4.319 1.00 9.55 N ATOM 297 CA ARG 33 -6.479 41.457 3.258 1.00 9.55 C ATOM 298 CB ARG 33 -5.969 42.869 3.605 1.00 9.55 C ATOM 299 CG ARG 33 -7.054 43.947 3.624 1.00 9.55 C ATOM 300 CD ARG 33 -6.468 45.352 3.732 1.00 9.55 C ATOM 301 NE ARG 33 -5.850 45.803 2.481 1.00 9.55 N ATOM 303 CZ ARG 33 -5.425 47.044 2.240 1.00 9.55 C ATOM 304 NH1 ARG 33 -4.882 47.330 1.065 1.00 9.55 N ATOM 307 NH2 ARG 33 -5.536 48.001 3.156 1.00 9.55 N ATOM 310 C ARG 33 -5.289 40.515 2.924 1.00 9.55 C ATOM 311 O ARG 33 -4.983 40.347 1.738 1.00 9.55 O ATOM 312 N PRO 34 -4.583 39.914 3.945 1.00 10.34 N ATOM 313 CD PRO 34 -3.742 38.780 3.501 1.00 10.34 C ATOM 314 CA PRO 34 -4.638 39.917 5.430 1.00 10.34 C ATOM 315 CB PRO 34 -3.886 38.636 5.815 1.00 10.34 C ATOM 316 CG PRO 34 -3.973 37.777 4.592 1.00 10.34 C ATOM 317 C PRO 34 -3.974 41.174 6.044 1.00 10.34 C ATOM 318 O PRO 34 -2.927 41.617 5.554 1.00 10.34 O ATOM 319 N PHE 35 -4.606 41.751 7.077 1.00 9.58 N ATOM 321 CA PHE 35 -4.125 42.964 7.778 1.00 9.58 C ATOM 322 CB PHE 35 -5.223 43.538 8.696 1.00 9.58 C ATOM 323 CG PHE 35 -6.342 44.287 7.975 1.00 9.58 C ATOM 324 CD1 PHE 35 -6.254 45.683 7.757 1.00 9.58 C ATOM 325 CD2 PHE 35 -7.519 43.616 7.568 1.00 9.58 C ATOM 326 CE1 PHE 35 -7.321 46.402 7.147 1.00 9.58 C ATOM 327 CE2 PHE 35 -8.594 44.320 6.957 1.00 9.58 C ATOM 328 CZ PHE 35 -8.494 45.716 6.748 1.00 9.58 C ATOM 329 C PHE 35 -2.840 42.806 8.600 1.00 9.58 C ATOM 330 O PHE 35 -1.988 43.700 8.588 1.00 9.58 O ATOM 331 N TRP 36 -2.737 41.698 9.346 1.00 8.62 N ATOM 333 CA TRP 36 -1.571 41.385 10.190 1.00 8.62 C ATOM 334 CB TRP 36 -1.935 40.318 11.235 1.00 8.62 C ATOM 335 CG TRP 36 -2.900 40.831 12.341 1.00 8.62 C ATOM 336 CD2 TRP 36 -4.328 41.051 12.240 1.00 8.62 C ATOM 337 CE2 TRP 36 -4.765 41.536 13.505 1.00 8.62 C ATOM 338 CE3 TRP 36 -5.279 40.888 11.207 1.00 8.62 C ATOM 339 CD1 TRP 36 -2.559 41.178 13.626 1.00 8.62 C ATOM 340 NE1 TRP 36 -3.667 41.600 14.320 1.00 8.62 N ATOM 342 CZ2 TRP 36 -6.117 41.863 13.772 1.00 8.62 C ATOM 343 CZ3 TRP 36 -6.634 41.216 11.470 1.00 8.62 C ATOM 344 CH2 TRP 36 -7.033 41.698 12.748 1.00 8.62 C ATOM 345 C TRP 36 -0.294 41.060 9.401 1.00 8.62 C ATOM 346 O TRP 36 0.812 41.405 9.841 1.00 8.62 O ATOM 347 N ILE 37 -0.449 40.390 8.246 1.00 7.47 N ATOM 349 CA ILE 37 0.686 40.081 7.356 1.00 7.47 C ATOM 350 CB ILE 37 0.316 39.006 6.236 1.00 7.47 C ATOM 351 CG2 ILE 37 -0.528 39.620 5.102 1.00 7.47 C ATOM 352 CG1 ILE 37 1.590 38.346 5.670 1.00 7.47 C ATOM 353 CD1 ILE 37 1.496 36.829 5.463 1.00 7.47 C ATOM 354 C ILE 37 1.117 41.457 6.798 1.00 7.47 C ATOM 355 O ILE 37 2.304 41.775 6.800 1.00 7.47 O ATOM 356 N SER 38 0.112 42.294 6.489 1.00 6.96 N ATOM 358 CA SER 38 0.261 43.663 5.956 1.00 6.96 C ATOM 359 CB SER 38 -1.108 44.250 5.581 1.00 6.96 C ATOM 360 OG SER 38 -0.982 45.495 4.912 1.00 6.96 O ATOM 362 C SER 38 0.968 44.568 6.972 1.00 6.96 C ATOM 363 O SER 38 1.717 45.474 6.584 1.00 6.96 O ATOM 364 N SER 39 0.700 44.313 8.263 1.00 6.44 N ATOM 366 CA SER 39 1.293 45.059 9.384 1.00 6.44 C ATOM 367 CB SER 39 0.695 44.582 10.726 1.00 6.44 C ATOM 368 OG SER 39 1.169 43.307 11.121 1.00 6.44 O ATOM 370 C SER 39 2.821 44.865 9.352 1.00 6.44 C ATOM 371 O SER 39 3.565 45.848 9.455 1.00 6.44 O ATOM 372 N PHE 40 3.270 43.605 9.222 1.00 6.94 N ATOM 374 CA PHE 40 4.705 43.281 9.126 1.00 6.94 C ATOM 375 CB PHE 40 4.955 41.802 9.561 1.00 6.94 C ATOM 376 CG PHE 40 6.433 41.414 9.736 1.00 6.94 C ATOM 377 CD1 PHE 40 7.136 40.763 8.692 1.00 6.94 C ATOM 378 CD2 PHE 40 7.122 41.682 10.944 1.00 6.94 C ATOM 379 CE1 PHE 40 8.500 40.390 8.842 1.00 6.94 C ATOM 380 CE2 PHE 40 8.487 41.313 11.108 1.00 6.94 C ATOM 381 CZ PHE 40 9.177 40.666 10.053 1.00 6.94 C ATOM 382 C PHE 40 5.353 43.575 7.742 1.00 6.94 C ATOM 383 O PHE 40 6.329 44.329 7.678 1.00 6.94 O ATOM 384 N ILE 41 4.801 42.987 6.666 1.00 5.98 N ATOM 386 CA ILE 41 5.294 43.154 5.276 1.00 5.98 C ATOM 387 CB ILE 41 5.036 41.866 4.377 1.00 5.98 C ATOM 388 CG2 ILE 41 5.762 40.654 4.992 1.00 5.98 C ATOM 389 CG1 ILE 41 3.537 41.595 4.135 1.00 5.98 C ATOM 390 CD1 ILE 41 3.196 40.969 2.773 1.00 5.98 C ATOM 391 C ILE 41 4.967 44.450 4.497 1.00 5.98 C ATOM 392 O ILE 41 5.859 45.080 3.912 1.00 5.98 O ATOM 393 N GLY 42 3.681 44.823 4.526 1.00 5.83 N ATOM 395 CA GLY 42 3.177 45.995 3.823 1.00 5.83 C ATOM 396 C GLY 42 2.279 45.602 2.655 1.00 5.83 C ATOM 397 O GLY 42 2.449 46.121 1.546 1.00 5.83 O ATOM 398 N ARG 43 1.331 44.689 2.916 1.00 6.86 N ATOM 400 CA ARG 43 0.360 44.176 1.926 1.00 6.86 C ATOM 401 CB ARG 43 -0.057 42.727 2.291 1.00 6.86 C ATOM 402 CG ARG 43 -0.294 41.810 1.082 1.00 6.86 C ATOM 403 CD ARG 43 -0.705 40.410 1.506 1.00 6.86 C ATOM 404 NE ARG 43 -0.928 39.530 0.357 1.00 6.86 N ATOM 406 CZ ARG 43 -1.233 38.234 0.431 1.00 6.86 C ATOM 407 NH1 ARG 43 -1.361 37.622 1.604 1.00 6.86 N ATOM 410 NH2 ARG 43 -1.414 37.541 -0.685 1.00 6.86 N ATOM 413 C ARG 43 -0.871 45.121 1.805 1.00 6.86 C ATOM 414 O ARG 43 -2.015 44.666 1.648 1.00 6.86 O ATOM 415 N SER 44 -0.597 46.433 1.849 1.00 7.06 N ATOM 417 CA SER 44 -1.606 47.504 1.750 1.00 7.06 C ATOM 418 CB SER 44 -1.346 48.574 2.821 1.00 7.06 C ATOM 419 OG SER 44 -0.014 49.058 2.760 1.00 7.06 O ATOM 421 C SER 44 -1.629 48.138 0.346 1.00 7.06 C ATOM 422 O SER 44 -0.676 47.964 -0.424 1.00 7.06 O ATOM 423 N LYS 45 -2.713 48.864 0.032 1.00 7.53 N ATOM 425 CA LYS 45 -2.917 49.539 -1.265 1.00 7.53 C ATOM 426 CG LYS 45 -4.841 48.041 -2.106 1.00 7.53 C ATOM 427 CD LYS 45 -6.304 48.034 -2.517 1.00 7.53 C ATOM 428 CE LYS 45 -6.753 46.644 -2.935 1.00 7.53 C ATOM 429 NZ LYS 45 -8.186 46.623 -3.342 1.00 7.53 N ATOM 433 C LYS 45 -2.467 51.015 -1.259 1.00 7.53 C ATOM 434 O LYS 45 -2.364 51.640 -2.325 1.00 7.53 O ATOM 435 CB LYS 45 -4.390 49.438 -1.692 1.00 7.53 C TER END