####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS497_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS497_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 20 - 44 4.75 8.97 LCS_AVERAGE: 52.63 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 27 - 33 1.82 17.58 LONGEST_CONTINUOUS_SEGMENT: 7 36 - 42 1.47 17.53 LCS_AVERAGE: 12.91 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 36 - 41 0.81 17.67 LCS_AVERAGE: 9.61 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 21 3 3 3 4 4 5 7 9 11 15 17 19 25 27 30 31 35 39 41 42 LCS_GDT V 3 V 3 3 5 21 3 3 3 5 8 10 13 14 16 18 22 27 29 34 36 38 39 40 41 42 LCS_GDT Q 4 Q 4 3 5 21 3 4 6 8 9 10 11 15 18 20 25 28 31 34 36 38 39 40 41 42 LCS_GDT G 5 G 5 3 5 21 3 3 3 4 7 10 11 14 18 20 25 28 31 34 36 38 39 40 41 42 LCS_GDT P 6 P 6 4 5 21 2 4 4 5 6 8 10 11 14 17 23 28 31 34 36 38 39 40 41 42 LCS_GDT W 7 W 7 4 5 21 2 4 4 5 5 7 10 11 12 14 17 23 31 34 36 38 39 40 41 42 LCS_GDT V 8 V 8 4 6 21 0 4 6 8 9 10 11 15 18 20 25 28 31 34 36 38 39 40 41 42 LCS_GDT G 9 G 9 5 6 21 1 4 6 8 9 10 13 16 18 20 25 28 31 34 36 38 39 40 41 42 LCS_GDT S 10 S 10 5 6 21 4 4 6 8 9 10 13 16 18 20 25 28 31 34 36 38 39 40 41 42 LCS_GDT S 11 S 11 5 6 21 4 4 5 6 8 10 13 16 18 20 25 28 31 34 36 38 39 40 41 42 LCS_GDT Y 12 Y 12 5 6 21 4 4 5 6 7 10 13 14 16 19 25 28 31 34 36 38 39 40 41 42 LCS_GDT V 13 V 13 5 6 21 4 4 6 8 9 10 13 15 18 20 25 28 31 34 36 38 39 40 41 42 LCS_GDT A 14 A 14 4 6 21 3 4 4 6 8 9 13 16 18 20 24 28 31 34 36 38 39 40 41 42 LCS_GDT E 15 E 15 4 5 21 3 4 4 5 6 7 9 12 15 17 19 22 23 27 29 35 37 40 41 42 LCS_GDT T 16 T 16 4 5 21 3 4 4 4 7 9 13 16 18 20 21 22 23 27 31 35 38 40 41 42 LCS_GDT G 17 G 17 4 5 21 3 4 4 6 8 9 12 15 18 20 24 26 30 34 36 38 39 40 41 42 LCS_GDT Q 18 Q 18 3 4 21 3 4 4 6 8 9 12 15 18 20 24 28 31 34 36 38 39 40 41 42 LCS_GDT N 19 N 19 3 4 21 3 3 4 4 5 7 8 11 13 17 21 28 31 34 36 38 39 40 41 42 LCS_GDT W 20 W 20 4 5 25 3 3 4 8 9 10 13 14 16 20 25 28 31 34 36 38 39 40 41 42 LCS_GDT A 21 A 21 4 5 25 3 3 4 5 8 10 13 14 16 20 25 28 31 34 36 38 39 40 41 42 LCS_GDT S 22 S 22 4 5 25 3 3 4 5 6 8 13 14 16 19 23 27 31 34 36 38 39 40 41 42 LCS_GDT L 23 L 23 5 5 25 3 4 5 6 7 8 8 10 12 16 19 22 23 26 30 34 37 40 40 42 LCS_GDT A 24 A 24 5 5 25 3 4 5 6 9 10 13 14 16 19 25 28 31 34 36 38 39 40 41 42 LCS_GDT A 25 A 25 5 5 25 3 4 6 8 9 10 11 14 16 19 25 28 31 34 36 38 39 40 41 42 LCS_GDT N 26 N 26 5 5 25 3 4 5 6 6 7 13 14 18 20 25 28 31 34 36 38 39 40 41 42 LCS_GDT E 27 E 27 5 7 25 3 4 5 6 8 9 12 15 18 20 25 28 31 34 36 38 39 40 41 42 LCS_GDT L 28 L 28 3 7 25 2 3 5 6 7 7 10 16 18 20 24 26 30 33 36 38 39 40 41 42 LCS_GDT R 29 R 29 3 7 25 3 3 5 6 7 9 13 16 18 20 23 26 28 30 34 37 39 40 41 42 LCS_GDT V 30 V 30 4 7 25 3 4 4 5 7 9 13 16 18 20 23 26 30 33 36 38 39 40 41 42 LCS_GDT T 31 T 31 4 7 25 3 4 5 6 7 9 13 16 18 20 23 26 29 33 36 38 39 40 41 42 LCS_GDT E 32 E 32 4 7 25 3 4 5 6 7 9 13 16 18 20 25 28 31 34 36 38 39 40 41 42 LCS_GDT R 33 R 33 4 7 25 3 4 5 6 8 10 13 16 18 20 25 28 31 34 36 38 39 40 41 42 LCS_GDT P 34 P 34 4 6 25 3 3 5 5 8 10 13 16 18 20 25 28 31 34 36 38 39 40 41 42 LCS_GDT F 35 F 35 4 6 25 3 3 5 5 7 9 13 16 18 20 25 28 31 34 36 38 39 40 41 42 LCS_GDT W 36 W 36 6 7 25 4 5 6 6 7 7 13 16 18 20 25 28 31 34 36 38 39 40 41 42 LCS_GDT I 37 I 37 6 7 25 4 5 6 6 8 9 12 16 18 20 25 28 31 34 36 38 39 40 41 42 LCS_GDT S 38 S 38 6 7 25 4 5 6 6 7 10 11 14 18 20 25 28 31 34 36 38 39 40 41 42 LCS_GDT S 39 S 39 6 7 25 4 5 6 8 9 10 13 16 18 20 25 28 31 34 36 38 39 40 41 42 LCS_GDT F 40 F 40 6 7 25 3 5 6 6 7 7 11 15 18 20 25 28 31 34 36 38 39 40 41 42 LCS_GDT I 41 I 41 6 7 25 3 4 6 6 7 7 10 13 16 20 25 28 31 34 36 38 39 40 41 42 LCS_GDT G 42 G 42 3 7 25 3 3 3 4 7 7 10 13 17 20 25 28 31 34 36 38 39 40 41 42 LCS_GDT R 43 R 43 3 4 25 3 3 3 4 5 7 10 13 16 19 24 26 31 34 36 38 39 40 41 42 LCS_GDT S 44 S 44 3 4 25 0 3 3 4 5 5 9 13 16 18 21 23 28 31 35 38 39 40 40 42 LCS_GDT K 45 K 45 3 3 16 0 3 3 3 3 5 6 6 7 9 9 15 18 19 29 32 32 37 38 40 LCS_AVERAGE LCS_A: 25.05 ( 9.61 12.91 52.63 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 6 8 9 10 13 16 18 20 25 28 31 34 36 38 39 40 41 42 GDT PERCENT_AT 9.09 11.36 13.64 18.18 20.45 22.73 29.55 36.36 40.91 45.45 56.82 63.64 70.45 77.27 81.82 86.36 88.64 90.91 93.18 95.45 GDT RMS_LOCAL 0.33 0.64 0.81 1.31 1.48 1.71 2.44 3.08 3.29 3.50 4.17 4.50 4.72 4.97 5.24 5.48 5.59 5.75 5.99 6.14 GDT RMS_ALL_AT 14.89 17.81 17.67 8.82 8.89 8.89 8.86 9.01 8.62 8.38 7.08 6.91 6.90 6.77 6.62 6.58 6.58 6.58 6.62 6.60 # Checking swapping # possible swapping detected: E 27 E 27 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 13.095 0 0.058 0.063 14.267 0.000 0.000 - LGA V 3 V 3 11.186 0 0.048 0.132 13.027 0.000 0.000 11.614 LGA Q 4 Q 4 10.875 0 0.088 0.976 17.223 0.000 0.000 16.657 LGA G 5 G 5 11.642 0 0.593 0.593 15.630 0.000 0.000 - LGA P 6 P 6 10.975 0 0.663 0.545 15.475 0.000 0.000 15.053 LGA W 7 W 7 8.298 0 0.303 0.499 11.288 0.000 0.000 10.542 LGA V 8 V 8 4.829 0 0.689 1.343 6.847 20.000 11.429 5.614 LGA G 9 G 9 3.533 0 0.521 0.521 3.830 21.818 21.818 - LGA S 10 S 10 1.565 0 0.219 0.673 4.100 67.727 50.606 4.100 LGA S 11 S 11 3.662 0 0.064 0.669 7.569 15.909 10.606 7.569 LGA Y 12 Y 12 6.956 0 0.078 0.706 8.670 0.000 0.000 8.065 LGA V 13 V 13 6.800 0 0.657 1.278 11.064 0.455 0.260 11.064 LGA A 14 A 14 2.348 0 0.550 0.546 3.838 23.636 32.000 - LGA E 15 E 15 5.004 0 0.054 1.376 12.358 7.273 3.232 12.358 LGA T 16 T 16 2.587 0 0.112 1.005 6.289 49.091 28.052 6.217 LGA G 17 G 17 5.279 0 0.418 0.418 8.432 6.818 6.818 - LGA Q 18 Q 18 6.168 0 0.661 1.338 8.025 0.000 5.051 4.066 LGA N 19 N 19 12.368 0 0.166 0.350 16.552 0.000 0.000 14.271 LGA W 20 W 20 13.746 0 0.631 1.184 25.492 0.000 0.000 25.492 LGA A 21 A 21 8.775 0 0.034 0.042 10.596 0.000 0.000 - LGA S 22 S 22 9.537 0 0.152 0.625 11.537 0.000 0.000 11.537 LGA L 23 L 23 13.766 0 0.317 1.016 20.475 0.000 0.000 20.475 LGA A 24 A 24 12.185 0 0.144 0.132 12.927 0.000 0.000 - LGA A 25 A 25 11.928 0 0.138 0.144 13.410 0.000 0.000 - LGA N 26 N 26 11.507 0 0.090 0.612 14.543 0.000 0.000 14.026 LGA E 27 E 27 8.341 0 0.577 1.387 14.695 0.000 0.000 14.695 LGA L 28 L 28 3.844 0 0.665 1.139 9.854 31.818 15.909 9.854 LGA R 29 R 29 1.931 0 0.458 1.519 11.653 38.636 16.033 11.653 LGA V 30 V 30 2.820 0 0.237 0.201 3.471 27.727 26.234 3.471 LGA T 31 T 31 3.113 0 0.056 0.162 5.551 34.545 21.299 4.357 LGA E 32 E 32 1.371 0 0.586 1.234 4.015 48.182 32.121 2.977 LGA R 33 R 33 3.401 0 0.654 0.975 12.980 27.727 10.083 12.980 LGA P 34 P 34 3.499 0 0.019 0.057 4.837 22.727 15.065 4.837 LGA F 35 F 35 3.489 0 0.674 1.227 9.509 12.273 5.455 9.509 LGA W 36 W 36 3.469 0 0.607 0.417 14.606 32.273 9.221 14.606 LGA I 37 I 37 4.299 0 0.106 1.245 8.383 10.909 5.455 8.383 LGA S 38 S 38 5.560 0 0.073 0.627 6.489 3.636 2.424 5.668 LGA S 39 S 39 2.642 0 0.140 0.243 6.613 16.364 14.848 4.097 LGA F 40 F 40 8.625 0 0.059 1.670 13.909 0.000 0.000 13.909 LGA I 41 I 41 10.904 0 0.605 0.546 12.884 0.000 0.000 11.872 LGA G 42 G 42 10.785 0 0.038 0.038 10.864 0.000 0.000 - LGA R 43 R 43 11.406 0 0.600 1.313 14.847 0.000 1.653 7.485 LGA S 44 S 44 16.955 0 0.634 0.604 19.525 0.000 0.000 15.415 LGA K 45 K 45 22.755 0 0.065 0.735 30.243 0.000 0.000 30.243 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 6.523 6.416 8.229 11.808 7.856 1.974 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 16 3.08 38.068 31.079 0.503 LGA_LOCAL RMSD: 3.083 Number of atoms: 16 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 9.006 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 6.523 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.408688 * X + -0.898208 * Y + -0.161854 * Z + 0.553878 Y_new = 0.232232 * X + -0.273846 * Y + 0.933315 * Z + 48.633381 Z_new = -0.882634 * X + 0.343847 * Y + 0.320510 * Z + -10.714107 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.624855 1.081437 0.820510 [DEG: 150.3931 61.9618 47.0118 ] ZXZ: -2.969882 1.244528 -1.199315 [DEG: -170.1617 71.3062 -68.7157 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS497_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS497_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 16 3.08 31.079 6.52 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS497_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 PARENT N/A ATOM 12 N ALA 2 2.108 32.246 4.037 1.00 7.66 N ATOM 14 CA ALA 2 3.202 32.733 3.150 1.00 7.66 C ATOM 15 CB ALA 2 4.096 31.571 2.642 1.00 7.66 C ATOM 16 C ALA 2 2.753 33.627 1.980 1.00 7.66 C ATOM 17 O ALA 2 1.583 33.586 1.582 1.00 7.66 O ATOM 18 N VAL 3 3.698 34.427 1.445 1.00 7.29 N ATOM 20 CA VAL 3 3.535 35.396 0.316 1.00 7.29 C ATOM 21 CB VAL 3 3.266 34.691 -1.094 1.00 7.29 C ATOM 22 CG1 VAL 3 3.469 35.674 -2.263 1.00 7.29 C ATOM 23 CG2 VAL 3 4.185 33.484 -1.285 1.00 7.29 C ATOM 24 C VAL 3 2.500 36.518 0.606 1.00 7.29 C ATOM 25 O VAL 3 1.478 36.271 1.259 1.00 7.29 O ATOM 26 N GLN 4 2.782 37.731 0.105 1.00 6.44 N ATOM 28 CA GLN 4 1.935 38.934 0.283 1.00 6.44 C ATOM 29 CB GLN 4 2.739 40.233 -0.006 1.00 6.44 C ATOM 30 CG GLN 4 3.605 40.279 -1.300 1.00 6.44 C ATOM 31 CD GLN 4 2.895 40.923 -2.487 1.00 6.44 C ATOM 32 OE1 GLN 4 2.343 40.232 -3.343 1.00 6.44 O ATOM 33 NE2 GLN 4 2.911 42.252 -2.538 1.00 6.44 N ATOM 36 C GLN 4 0.595 38.946 -0.480 1.00 6.44 C ATOM 37 O GLN 4 0.499 38.404 -1.587 1.00 6.44 O ATOM 38 N GLY 5 -0.414 39.569 0.135 1.00 5.24 N ATOM 40 CA GLY 5 -1.743 39.672 -0.453 1.00 5.24 C ATOM 41 C GLY 5 -2.943 39.329 0.434 1.00 5.24 C ATOM 42 O GLY 5 -3.879 38.738 -0.117 1.00 5.24 O ATOM 43 N PRO 6 -2.981 39.627 1.772 1.00 6.04 N ATOM 44 CD PRO 6 -4.335 39.513 2.364 1.00 6.04 C ATOM 45 CA PRO 6 -2.063 40.273 2.742 1.00 6.04 C ATOM 46 CB PRO 6 -3.000 40.652 3.897 1.00 6.04 C ATOM 47 CG PRO 6 -4.081 39.610 3.844 1.00 6.04 C ATOM 48 C PRO 6 -0.874 39.387 3.207 1.00 6.04 C ATOM 49 O PRO 6 -0.690 38.290 2.663 1.00 6.04 O ATOM 50 N TRP 7 -0.085 39.860 4.189 1.00 7.73 N ATOM 52 CA TRP 7 1.059 39.100 4.729 1.00 7.73 C ATOM 53 CB TRP 7 2.144 40.036 5.305 1.00 7.73 C ATOM 54 CG TRP 7 3.208 40.583 4.331 1.00 7.73 C ATOM 55 CD2 TRP 7 4.617 40.271 4.317 1.00 7.73 C ATOM 56 CE2 TRP 7 5.210 41.051 3.285 1.00 7.73 C ATOM 57 CE3 TRP 7 5.440 39.409 5.077 1.00 7.73 C ATOM 58 CD1 TRP 7 3.022 41.513 3.333 1.00 7.73 C ATOM 59 NE1 TRP 7 4.213 41.793 2.709 1.00 7.73 N ATOM 61 CZ2 TRP 7 6.594 40.999 2.989 1.00 7.73 C ATOM 62 CZ3 TRP 7 6.826 39.354 4.782 1.00 7.73 C ATOM 63 CH2 TRP 7 7.382 40.149 3.743 1.00 7.73 C ATOM 64 C TRP 7 0.630 38.113 5.825 1.00 7.73 C ATOM 65 O TRP 7 -0.017 38.490 6.813 1.00 7.73 O ATOM 66 N VAL 8 0.958 36.842 5.580 1.00 6.37 N ATOM 68 CA VAL 8 0.707 35.691 6.463 1.00 6.37 C ATOM 69 CB VAL 8 -0.473 34.777 5.963 1.00 6.37 C ATOM 70 CG1 VAL 8 -1.794 35.314 6.486 1.00 6.37 C ATOM 71 CG2 VAL 8 -0.529 34.703 4.419 1.00 6.37 C ATOM 72 C VAL 8 2.051 34.956 6.525 1.00 6.37 C ATOM 73 O VAL 8 2.756 34.918 5.514 1.00 6.37 O ATOM 74 N GLY 9 2.397 34.362 7.668 1.00 6.00 N ATOM 76 CA GLY 9 3.696 33.712 7.784 1.00 6.00 C ATOM 77 C GLY 9 3.801 32.198 7.774 1.00 6.00 C ATOM 78 O GLY 9 3.212 31.514 8.617 1.00 6.00 O ATOM 79 N SER 10 4.554 31.698 6.780 1.00 7.02 N ATOM 81 CA SER 10 4.855 30.272 6.567 1.00 7.02 C ATOM 82 CB SER 10 3.868 29.611 5.589 1.00 7.02 C ATOM 83 OG SER 10 4.059 28.207 5.519 1.00 7.02 O ATOM 85 C SER 10 6.314 30.132 6.074 1.00 7.02 C ATOM 86 O SER 10 7.151 29.590 6.804 1.00 7.02 O ATOM 87 N SER 11 6.606 30.616 4.852 1.00 7.93 N ATOM 89 CA SER 11 7.953 30.556 4.235 1.00 7.93 C ATOM 90 OG SER 11 7.036 29.764 2.122 1.00 7.93 O ATOM 92 C SER 11 9.059 31.473 4.810 1.00 7.93 C ATOM 93 O SER 11 10.154 30.985 5.116 1.00 7.93 O ATOM 94 CB SER 11 7.844 30.762 2.720 1.00 7.93 C ATOM 95 N TYR 12 8.771 32.780 4.949 1.00 10.56 N ATOM 97 CA TYR 12 9.710 33.791 5.501 1.00 10.56 C ATOM 98 CB TYR 12 9.267 35.242 5.142 1.00 10.56 C ATOM 99 CG TYR 12 7.820 35.484 4.714 1.00 10.56 C ATOM 100 CD1 TYR 12 6.792 35.639 5.669 1.00 10.56 C ATOM 101 CE1 TYR 12 5.468 35.932 5.279 1.00 10.56 C ATOM 102 CD2 TYR 12 7.485 35.627 3.348 1.00 10.56 C ATOM 103 CE2 TYR 12 6.157 35.922 2.946 1.00 10.56 C ATOM 104 CZ TYR 12 5.159 36.073 3.919 1.00 10.56 C ATOM 105 OH TYR 12 3.870 36.379 3.547 1.00 10.56 O ATOM 107 C TYR 12 9.915 33.653 7.024 1.00 10.56 C ATOM 108 O TYR 12 11.046 33.671 7.524 1.00 10.56 O ATOM 109 N VAL 13 8.779 33.520 7.719 1.00 10.08 N ATOM 111 CA VAL 13 8.607 33.336 9.178 1.00 10.08 C ATOM 112 CB VAL 13 8.284 34.671 9.966 1.00 10.08 C ATOM 113 CG1 VAL 13 9.579 35.301 10.453 1.00 10.08 C ATOM 114 CG2 VAL 13 7.530 35.687 9.101 1.00 10.08 C ATOM 115 C VAL 13 7.423 32.357 9.174 1.00 10.08 C ATOM 116 O VAL 13 6.612 32.432 8.250 1.00 10.08 O ATOM 117 N ALA 14 7.323 31.444 10.147 1.00 10.62 N ATOM 119 CA ALA 14 6.253 30.432 10.119 1.00 10.62 C ATOM 120 CB ALA 14 6.862 29.040 10.203 1.00 10.62 C ATOM 121 C ALA 14 5.026 30.521 11.038 1.00 10.62 C ATOM 122 O ALA 14 5.052 31.182 12.081 1.00 10.62 O ATOM 123 N GLU 15 3.990 29.761 10.638 1.00 9.21 N ATOM 125 CA GLU 15 2.660 29.635 11.279 1.00 9.21 C ATOM 126 CB GLU 15 1.721 28.743 10.421 1.00 9.21 C ATOM 127 CG GLU 15 2.261 27.363 9.934 1.00 9.21 C ATOM 128 CD GLU 15 2.877 27.405 8.538 1.00 9.21 C ATOM 129 OE1 GLU 15 4.110 27.572 8.437 1.00 9.21 O ATOM 130 OE2 GLU 15 2.125 27.269 7.550 1.00 9.21 O ATOM 131 C GLU 15 2.676 29.187 12.753 1.00 9.21 C ATOM 132 O GLU 15 1.788 29.566 13.527 1.00 9.21 O ATOM 133 N THR 16 3.680 28.368 13.106 1.00 8.34 N ATOM 135 CA THR 16 3.903 27.832 14.469 1.00 8.34 C ATOM 136 CB THR 16 5.164 26.876 14.507 1.00 8.34 C ATOM 137 OG1 THR 16 5.435 26.473 15.857 1.00 8.34 O ATOM 139 CG2 THR 16 6.423 27.526 13.888 1.00 8.34 C ATOM 140 C THR 16 4.025 29.002 15.475 1.00 8.34 C ATOM 141 O THR 16 3.582 28.901 16.625 1.00 8.34 O ATOM 142 N GLY 17 4.626 30.095 14.992 1.00 11.39 N ATOM 144 CA GLY 17 4.792 31.323 15.757 1.00 11.39 C ATOM 145 C GLY 17 4.002 32.382 15.009 1.00 11.39 C ATOM 146 O GLY 17 4.588 33.136 14.231 1.00 11.39 O ATOM 147 N GLN 18 2.689 32.448 15.276 1.00 8.63 N ATOM 149 CA GLN 18 1.726 33.370 14.632 1.00 8.63 C ATOM 150 CB GLN 18 0.303 33.104 15.136 1.00 8.63 C ATOM 151 CG GLN 18 -0.299 31.778 14.681 1.00 8.63 C ATOM 152 CD GLN 18 -1.705 31.566 15.207 1.00 8.63 C ATOM 153 OE1 GLN 18 -1.899 30.991 16.278 1.00 8.63 O ATOM 154 NE2 GLN 18 -2.697 32.031 14.455 1.00 8.63 N ATOM 157 C GLN 18 2.045 34.865 14.770 1.00 8.63 C ATOM 158 O GLN 18 1.762 35.644 13.853 1.00 8.63 O ATOM 159 N ASN 19 2.585 35.255 15.931 1.00 8.23 N ATOM 161 CA ASN 19 2.979 36.643 16.232 1.00 8.23 C ATOM 162 CB ASN 19 3.367 36.775 17.719 1.00 8.23 C ATOM 163 CG ASN 19 2.353 36.125 18.671 1.00 8.23 C ATOM 164 OD1 ASN 19 2.155 34.906 18.658 1.00 8.23 O ATOM 165 ND2 ASN 19 1.745 36.936 19.527 1.00 8.23 N ATOM 168 C ASN 19 4.197 36.965 15.358 1.00 8.23 C ATOM 169 O ASN 19 4.130 37.873 14.526 1.00 8.23 O ATOM 170 N TRP 20 5.178 36.041 15.408 1.00 7.27 N ATOM 172 CA TRP 20 6.476 36.059 14.692 1.00 7.27 C ATOM 173 CB TRP 20 7.345 34.863 15.143 1.00 7.27 C ATOM 174 CG TRP 20 8.885 35.024 15.007 1.00 7.27 C ATOM 175 CD2 TRP 20 9.794 35.647 15.946 1.00 7.27 C ATOM 176 CE2 TRP 20 11.104 35.516 15.407 1.00 7.27 C ATOM 177 CE3 TRP 20 9.629 36.302 17.189 1.00 7.27 C ATOM 178 CD1 TRP 20 9.670 34.562 13.977 1.00 7.27 C ATOM 179 NE1 TRP 20 10.992 34.855 14.213 1.00 7.27 N ATOM 181 CZ2 TRP 20 12.254 36.018 16.066 1.00 7.27 C ATOM 182 CZ3 TRP 20 10.778 36.804 17.851 1.00 7.27 C ATOM 183 CH2 TRP 20 12.072 36.654 17.280 1.00 7.27 C ATOM 184 C TRP 20 6.214 35.988 13.185 1.00 7.27 C ATOM 185 O TRP 20 7.031 36.420 12.379 1.00 7.27 O ATOM 186 N ALA 21 5.155 35.267 12.843 1.00 7.03 N ATOM 188 CA ALA 21 4.656 35.083 11.488 1.00 7.03 C ATOM 189 CB ALA 21 3.705 33.906 11.424 1.00 7.03 C ATOM 190 C ALA 21 3.994 36.319 10.881 1.00 7.03 C ATOM 191 O ALA 21 4.152 36.539 9.675 1.00 7.03 O ATOM 192 N SER 22 3.412 37.203 11.721 1.00 7.28 N ATOM 194 CA SER 22 2.576 38.296 11.186 1.00 7.28 C ATOM 195 CB SER 22 2.142 39.224 12.327 1.00 7.28 C ATOM 196 OG SER 22 1.185 40.177 11.895 1.00 7.28 O ATOM 198 C SER 22 3.207 39.091 10.037 1.00 7.28 C ATOM 199 O SER 22 2.652 38.925 8.955 1.00 7.28 O ATOM 200 N LEU 23 4.233 39.960 10.110 1.00 7.08 N ATOM 202 CA LEU 23 4.727 40.273 8.748 1.00 7.08 C ATOM 203 CB LEU 23 5.158 41.765 8.648 1.00 7.08 C ATOM 204 CG LEU 23 5.541 42.516 7.349 1.00 7.08 C ATOM 205 CD1 LEU 23 5.321 44.003 7.567 1.00 7.08 C ATOM 206 CD2 LEU 23 6.995 42.258 6.913 1.00 7.08 C ATOM 207 C LEU 23 5.935 39.300 8.755 1.00 7.08 C ATOM 208 O LEU 23 5.857 38.164 8.284 1.00 7.08 O ATOM 209 N ALA 24 7.080 39.914 9.096 1.00 10.08 N ATOM 211 CA ALA 24 8.375 39.414 9.554 1.00 10.08 C ATOM 212 CB ALA 24 9.492 39.862 8.638 1.00 10.08 C ATOM 213 C ALA 24 8.425 40.145 10.923 1.00 10.08 C ATOM 214 O ALA 24 9.227 39.822 11.800 1.00 10.08 O ATOM 215 N ALA 25 8.052 41.422 10.677 1.00 10.08 N ATOM 217 CA ALA 25 7.939 42.624 11.542 1.00 10.08 C ATOM 218 CB ALA 25 8.146 43.857 10.669 1.00 10.08 C ATOM 219 C ALA 25 6.842 42.954 12.570 1.00 10.08 C ATOM 220 O ALA 25 7.158 43.447 13.658 1.00 10.08 O ATOM 221 N ASN 26 5.571 42.743 12.205 1.00 8.32 N ATOM 223 CA ASN 26 4.396 43.107 13.032 1.00 8.32 C ATOM 224 CB ASN 26 3.105 42.821 12.249 1.00 8.32 C ATOM 225 CG ASN 26 2.824 43.858 11.167 1.00 8.32 C ATOM 226 OD1 ASN 26 3.617 44.056 10.244 1.00 8.32 O ATOM 227 ND2 ASN 26 1.670 44.507 11.265 1.00 8.32 N ATOM 230 C ASN 26 4.257 42.589 14.473 1.00 8.32 C ATOM 231 O ASN 26 3.725 43.308 15.323 1.00 8.32 O ATOM 232 N GLU 27 4.718 41.353 14.736 1.00 7.09 N ATOM 234 CA GLU 27 4.669 40.660 16.059 1.00 7.09 C ATOM 235 CG GLU 27 6.158 42.473 17.328 1.00 7.09 C ATOM 236 CD GLU 27 7.386 42.653 18.199 1.00 7.09 C ATOM 237 OE1 GLU 27 7.249 42.605 19.440 1.00 7.09 O ATOM 238 OE2 GLU 27 8.488 42.845 17.645 1.00 7.09 O ATOM 239 C GLU 27 3.316 40.720 16.824 1.00 7.09 C ATOM 240 O GLU 27 2.285 41.003 16.202 1.00 7.09 O ATOM 241 CB GLU 27 5.904 40.996 16.956 1.00 7.09 C ATOM 242 N LEU 28 3.327 40.461 18.148 1.00 10.02 N ATOM 244 CA LEU 28 2.146 40.458 19.060 1.00 10.02 C ATOM 245 CB LEU 28 1.847 41.883 19.634 1.00 10.02 C ATOM 246 CG LEU 28 1.605 43.205 18.868 1.00 10.02 C ATOM 247 CD1 LEU 28 0.734 44.114 19.718 1.00 10.02 C ATOM 248 CD2 LEU 28 2.912 43.917 18.485 1.00 10.02 C ATOM 249 C LEU 28 0.868 39.733 18.546 1.00 10.02 C ATOM 250 O LEU 28 0.959 38.945 17.596 1.00 10.02 O ATOM 251 N ARG 29 -0.292 39.989 19.171 1.00 8.21 N ATOM 253 CA ARG 29 -1.581 39.371 18.793 1.00 8.21 C ATOM 254 CB ARG 29 -2.571 39.418 19.969 1.00 8.21 C ATOM 255 CG ARG 29 -2.205 38.518 21.152 1.00 8.21 C ATOM 256 CD ARG 29 -3.224 38.608 22.286 1.00 8.21 C ATOM 257 NE ARG 29 -4.516 38.004 21.940 1.00 8.21 N ATOM 259 CZ ARG 29 -5.577 37.946 22.746 1.00 8.21 C ATOM 260 NH1 ARG 29 -6.692 37.372 22.317 1.00 8.21 N ATOM 263 NH2 ARG 29 -5.539 38.456 23.974 1.00 8.21 N ATOM 266 C ARG 29 -2.216 39.999 17.535 1.00 8.21 C ATOM 267 O ARG 29 -2.380 41.223 17.463 1.00 8.21 O ATOM 268 N VAL 30 -2.546 39.144 16.554 1.00 9.10 N ATOM 270 CA VAL 30 -3.159 39.537 15.265 1.00 9.10 C ATOM 271 CB VAL 30 -2.622 38.620 14.075 1.00 9.10 C ATOM 272 CG1 VAL 30 -3.159 39.081 12.719 1.00 9.10 C ATOM 273 CG2 VAL 30 -1.095 38.605 14.052 1.00 9.10 C ATOM 274 C VAL 30 -4.712 39.517 15.408 1.00 9.10 C ATOM 275 O VAL 30 -5.398 38.634 14.869 1.00 9.10 O ATOM 276 N THR 31 -5.230 40.478 16.190 1.00 9.11 N ATOM 278 CA THR 31 -6.671 40.646 16.478 1.00 9.11 C ATOM 279 CB THR 31 -7.060 40.033 17.869 1.00 9.11 C ATOM 280 OG1 THR 31 -6.106 40.436 18.861 1.00 9.11 O ATOM 282 CG2 THR 31 -7.120 38.511 17.801 1.00 9.11 C ATOM 283 C THR 31 -7.109 42.126 16.467 1.00 9.11 C ATOM 284 O THR 31 -8.293 42.423 16.240 1.00 9.11 O ATOM 285 N GLU 32 -6.142 43.039 16.648 1.00 10.22 N ATOM 287 CA GLU 32 -6.366 44.504 16.709 1.00 10.22 C ATOM 288 CB GLU 32 -5.101 45.221 17.202 1.00 10.22 C ATOM 289 CG GLU 32 -4.756 44.973 18.670 1.00 10.22 C ATOM 290 CD GLU 32 -3.505 45.711 19.110 1.00 10.22 C ATOM 291 OE1 GLU 32 -2.402 45.134 19.001 1.00 10.22 O ATOM 292 OE2 GLU 32 -3.624 46.866 19.571 1.00 10.22 O ATOM 293 C GLU 32 -6.928 45.227 15.463 1.00 10.22 C ATOM 294 O GLU 32 -7.990 45.855 15.557 1.00 10.22 O ATOM 295 N ARG 33 -6.227 45.139 14.322 1.00 7.76 N ATOM 297 CA ARG 33 -6.640 45.790 13.062 1.00 7.76 C ATOM 298 CB ARG 33 -5.433 46.436 12.358 1.00 7.76 C ATOM 299 CG ARG 33 -5.086 47.817 12.912 1.00 7.76 C ATOM 300 CD ARG 33 -3.699 48.289 12.494 1.00 7.76 C ATOM 301 NE ARG 33 -2.637 47.633 13.264 1.00 7.76 N ATOM 303 CZ ARG 33 -1.549 48.238 13.743 1.00 7.76 C ATOM 304 NH1 ARG 33 -0.661 47.533 14.430 1.00 7.76 N ATOM 307 NH2 ARG 33 -1.339 49.535 13.546 1.00 7.76 N ATOM 310 C ARG 33 -7.485 44.934 12.075 1.00 7.76 C ATOM 311 O ARG 33 -8.458 45.466 11.527 1.00 7.76 O ATOM 312 N PRO 34 -7.135 43.629 11.807 1.00 6.81 N ATOM 313 CD PRO 34 -8.196 42.878 11.099 1.00 6.81 C ATOM 314 CA PRO 34 -6.074 42.674 12.212 1.00 6.81 C ATOM 315 CB PRO 34 -6.584 41.337 11.665 1.00 6.81 C ATOM 316 CG PRO 34 -8.054 41.493 11.680 1.00 6.81 C ATOM 317 C PRO 34 -4.690 43.012 11.616 1.00 6.81 C ATOM 318 O PRO 34 -4.607 43.799 10.666 1.00 6.81 O ATOM 319 N PHE 35 -3.631 42.405 12.170 1.00 6.59 N ATOM 321 CA PHE 35 -2.237 42.608 11.735 1.00 6.59 C ATOM 322 CB PHE 35 -1.223 42.105 12.788 1.00 6.59 C ATOM 323 CG PHE 35 -1.041 43.034 13.991 1.00 6.59 C ATOM 324 CD1 PHE 35 0.125 43.821 14.115 1.00 6.59 C ATOM 325 CD2 PHE 35 -2.015 43.111 15.016 1.00 6.59 C ATOM 326 CE1 PHE 35 0.325 44.673 15.235 1.00 6.59 C ATOM 327 CE2 PHE 35 -1.830 43.960 16.143 1.00 6.59 C ATOM 328 CZ PHE 35 -0.657 44.742 16.252 1.00 6.59 C ATOM 329 C PHE 35 -1.850 42.142 10.323 1.00 6.59 C ATOM 330 O PHE 35 -0.948 42.737 9.731 1.00 6.59 O ATOM 331 N TRP 36 -2.494 41.082 9.801 1.00 5.60 N ATOM 333 CA TRP 36 -2.203 40.540 8.447 1.00 5.60 C ATOM 334 CB TRP 36 -3.117 39.341 8.098 1.00 5.60 C ATOM 335 CG TRP 36 -3.312 38.214 9.139 1.00 5.60 C ATOM 336 CD2 TRP 36 -2.325 37.284 9.651 1.00 5.60 C ATOM 337 CE2 TRP 36 -3.015 36.367 10.495 1.00 5.60 C ATOM 338 CE3 TRP 36 -0.931 37.133 9.478 1.00 5.60 C ATOM 339 CD1 TRP 36 -4.506 37.829 9.691 1.00 5.60 C ATOM 340 NE1 TRP 36 -4.336 36.728 10.495 1.00 5.60 N ATOM 342 CZ2 TRP 36 -2.359 35.308 11.169 1.00 5.60 C ATOM 343 CZ3 TRP 36 -0.272 36.073 10.151 1.00 5.60 C ATOM 344 CH2 TRP 36 -0.995 35.176 10.986 1.00 5.60 C ATOM 345 C TRP 36 -2.385 41.616 7.347 1.00 5.60 C ATOM 346 O TRP 36 -1.506 41.790 6.490 1.00 5.60 O ATOM 347 N ILE 37 -3.507 42.349 7.408 1.00 5.54 N ATOM 349 CA ILE 37 -3.837 43.436 6.461 1.00 5.54 C ATOM 350 CB ILE 37 -5.343 43.877 6.569 1.00 5.54 C ATOM 351 CG2 ILE 37 -5.734 44.785 5.363 1.00 5.54 C ATOM 352 CG1 ILE 37 -6.265 42.643 6.563 1.00 5.54 C ATOM 353 CD1 ILE 37 -7.519 42.759 7.443 1.00 5.54 C ATOM 354 C ILE 37 -2.888 44.627 6.726 1.00 5.54 C ATOM 355 O ILE 37 -2.350 45.211 5.781 1.00 5.54 O ATOM 356 N SER 38 -2.637 44.901 8.018 1.00 5.36 N ATOM 358 CA SER 38 -1.763 45.987 8.509 1.00 5.36 C ATOM 359 CB SER 38 -1.863 46.094 10.038 1.00 5.36 C ATOM 360 OG SER 38 -1.195 47.243 10.532 1.00 5.36 O ATOM 362 C SER 38 -0.300 45.770 8.085 1.00 5.36 C ATOM 363 O SER 38 0.417 46.738 7.820 1.00 5.36 O ATOM 364 N SER 39 0.122 44.496 8.052 1.00 5.05 N ATOM 366 CA SER 39 1.477 44.066 7.657 1.00 5.05 C ATOM 367 CB SER 39 1.698 42.591 8.010 1.00 5.05 C ATOM 368 OG SER 39 0.693 41.759 7.479 1.00 5.05 O ATOM 370 C SER 39 1.718 44.311 6.161 1.00 5.05 C ATOM 371 O SER 39 2.828 44.686 5.764 1.00 5.05 O ATOM 372 N PHE 40 0.671 44.089 5.350 1.00 4.99 N ATOM 374 CA PHE 40 0.700 44.327 3.894 1.00 4.99 C ATOM 375 CB PHE 40 -0.565 43.743 3.211 1.00 4.99 C ATOM 376 CG PHE 40 -0.544 43.769 1.675 1.00 4.99 C ATOM 377 CD1 PHE 40 -1.226 44.789 0.967 1.00 4.99 C ATOM 378 CD2 PHE 40 0.134 42.773 0.933 1.00 4.99 C ATOM 379 CE1 PHE 40 -1.233 44.820 -0.454 1.00 4.99 C ATOM 380 CE2 PHE 40 0.136 42.790 -0.490 1.00 4.99 C ATOM 381 CZ PHE 40 -0.550 43.817 -1.184 1.00 4.99 C ATOM 382 C PHE 40 0.787 45.854 3.706 1.00 4.99 C ATOM 383 O PHE 40 1.462 46.334 2.789 1.00 4.99 O ATOM 384 N ILE 41 0.082 46.583 4.585 1.00 4.84 N ATOM 386 CA ILE 41 0.047 48.059 4.633 1.00 4.84 C ATOM 387 CB ILE 41 -1.149 48.579 5.532 1.00 4.84 C ATOM 388 CG2 ILE 41 -1.096 50.132 5.690 1.00 4.84 C ATOM 389 CG1 ILE 41 -2.497 48.195 4.889 1.00 4.84 C ATOM 390 CD1 ILE 41 -3.687 48.055 5.861 1.00 4.84 C ATOM 391 C ILE 41 1.421 48.580 5.127 1.00 4.84 C ATOM 392 O ILE 41 1.913 49.597 4.632 1.00 4.84 O ATOM 393 N GLY 42 2.021 47.850 6.076 1.00 4.98 N ATOM 395 CA GLY 42 3.317 48.210 6.637 1.00 4.98 C ATOM 396 C GLY 42 3.340 48.447 8.138 1.00 4.98 C ATOM 397 O GLY 42 4.425 48.560 8.720 1.00 4.98 O ATOM 398 N ARG 43 2.147 48.509 8.755 1.00 4.73 N ATOM 400 CA ARG 43 1.895 48.736 10.206 1.00 4.73 C ATOM 401 CB ARG 43 2.520 47.623 11.096 1.00 4.73 C ATOM 402 CG ARG 43 1.925 47.480 12.514 1.00 4.73 C ATOM 403 CD ARG 43 2.829 46.677 13.447 1.00 4.73 C ATOM 404 NE ARG 43 4.064 47.388 13.791 1.00 4.73 N ATOM 406 CZ ARG 43 5.013 46.932 14.611 1.00 4.73 C ATOM 407 NH1 ARG 43 4.900 45.746 15.202 1.00 4.73 N ATOM 410 NH2 ARG 43 6.088 47.672 14.842 1.00 4.73 N ATOM 413 C ARG 43 2.291 50.151 10.708 1.00 4.73 C ATOM 414 O ARG 43 1.516 50.780 11.439 1.00 4.73 O ATOM 415 N SER 44 3.482 50.624 10.313 1.00 4.86 N ATOM 417 CA SER 44 4.016 51.946 10.695 1.00 4.86 C ATOM 418 CB SER 44 5.513 51.846 11.012 1.00 4.86 C ATOM 419 OG SER 44 5.748 50.948 12.083 1.00 4.86 O ATOM 421 C SER 44 3.778 53.008 9.606 1.00 4.86 C ATOM 422 O SER 44 3.421 54.148 9.925 1.00 4.86 O ATOM 423 N LYS 45 3.982 52.618 8.339 1.00 5.56 N ATOM 425 CA LYS 45 3.795 53.491 7.161 1.00 5.56 C ATOM 426 CG LYS 45 6.238 54.305 6.988 1.00 5.56 C ATOM 427 CD LYS 45 7.464 54.335 6.091 1.00 5.56 C ATOM 428 CE LYS 45 8.618 55.069 6.757 1.00 5.56 C ATOM 429 NZ LYS 45 9.827 55.107 5.889 1.00 5.56 N ATOM 433 C LYS 45 2.633 52.964 6.304 1.00 5.56 C ATOM 434 O LYS 45 2.550 51.755 6.048 1.00 5.56 O ATOM 435 CB LYS 45 5.081 53.569 6.320 1.00 5.56 C TER END