####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS497_3-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS497_3-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 24 - 45 4.94 13.48 LCS_AVERAGE: 47.57 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 20 - 32 1.91 17.15 LCS_AVERAGE: 20.76 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 20 - 28 0.93 16.98 LCS_AVERAGE: 12.86 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 18 3 3 3 4 5 10 13 16 18 22 25 27 29 30 31 33 34 35 37 38 LCS_GDT V 3 V 3 5 7 20 3 4 6 8 8 9 13 16 18 22 25 27 29 30 31 33 34 35 37 38 LCS_GDT Q 4 Q 4 6 7 20 4 4 6 8 8 10 13 16 18 22 25 27 29 30 31 33 34 35 37 38 LCS_GDT G 5 G 5 6 7 20 4 4 6 8 8 10 13 16 18 22 25 27 29 30 31 33 34 35 37 38 LCS_GDT P 6 P 6 6 7 20 4 4 6 8 8 10 13 16 18 22 25 27 29 30 31 33 34 35 37 38 LCS_GDT W 7 W 7 6 7 20 4 4 6 8 8 9 12 16 18 22 25 27 29 30 31 33 34 35 37 38 LCS_GDT V 8 V 8 6 7 20 3 4 6 8 8 9 10 14 18 22 25 27 29 30 31 33 34 35 37 38 LCS_GDT G 9 G 9 6 7 20 3 3 6 8 8 9 10 14 18 18 21 24 27 29 31 33 34 35 37 38 LCS_GDT S 10 S 10 4 5 20 4 4 4 5 6 9 10 14 18 18 21 24 27 29 31 33 34 35 37 38 LCS_GDT S 11 S 11 4 5 20 4 4 4 5 6 9 10 14 18 18 21 24 27 29 31 33 34 35 37 38 LCS_GDT Y 12 Y 12 4 5 20 4 4 4 5 6 9 10 14 18 19 23 27 29 30 31 33 34 35 37 38 LCS_GDT V 13 V 13 4 7 20 4 4 4 5 6 9 10 14 18 19 23 27 29 30 31 33 34 35 37 38 LCS_GDT A 14 A 14 4 7 20 3 4 5 7 7 8 10 14 18 22 25 27 29 30 31 33 34 35 37 38 LCS_GDT E 15 E 15 4 7 20 3 4 6 7 8 10 13 16 18 22 25 27 29 30 31 33 34 35 37 38 LCS_GDT T 16 T 16 4 7 20 3 4 6 7 8 10 13 16 18 22 25 27 29 30 31 33 34 35 37 38 LCS_GDT G 17 G 17 4 7 20 3 4 5 5 6 10 13 16 18 22 25 27 29 30 31 33 34 35 37 38 LCS_GDT Q 18 Q 18 4 7 20 3 4 5 7 7 9 12 16 18 22 25 27 29 30 31 33 34 35 37 38 LCS_GDT N 19 N 19 4 7 20 3 3 4 5 5 9 10 13 16 18 25 27 29 30 31 33 34 35 37 38 LCS_GDT W 20 W 20 9 13 20 5 7 9 10 12 13 13 14 18 22 25 27 29 30 31 33 34 35 37 38 LCS_GDT A 21 A 21 9 13 20 6 7 9 10 12 13 13 16 18 22 25 27 29 30 31 33 34 35 37 38 LCS_GDT S 22 S 22 9 13 20 6 7 9 10 12 13 13 15 18 22 25 27 29 30 31 33 34 35 37 38 LCS_GDT L 23 L 23 9 13 19 6 7 9 10 12 13 13 14 18 18 20 26 28 30 31 33 34 35 37 38 LCS_GDT A 24 A 24 9 13 22 6 7 9 10 12 13 13 14 18 19 23 26 28 30 31 33 34 35 37 38 LCS_GDT A 25 A 25 9 13 22 6 7 9 10 12 13 13 14 18 19 23 26 28 30 31 33 34 35 37 38 LCS_GDT N 26 N 26 9 13 22 6 7 9 10 12 13 13 14 18 18 21 24 27 29 30 32 34 35 37 38 LCS_GDT E 27 E 27 9 13 22 4 5 9 10 12 13 13 14 15 16 18 19 20 22 24 26 31 31 33 34 LCS_GDT L 28 L 28 9 13 22 4 7 9 10 12 13 13 14 14 15 18 19 19 26 30 30 31 32 33 34 LCS_GDT R 29 R 29 5 13 22 3 4 6 10 12 13 13 14 18 19 21 24 27 29 31 33 34 35 37 38 LCS_GDT V 30 V 30 4 13 22 3 4 6 10 12 13 13 14 16 19 23 26 28 30 31 33 34 35 37 38 LCS_GDT T 31 T 31 4 13 22 3 4 5 6 11 12 13 15 18 21 23 26 28 30 31 33 34 35 37 38 LCS_GDT E 32 E 32 4 13 22 3 4 6 10 12 13 13 16 18 22 25 27 29 30 31 33 34 35 37 38 LCS_GDT R 33 R 33 4 11 22 3 3 5 10 12 13 13 14 16 22 25 26 29 30 30 33 34 35 36 37 LCS_GDT P 34 P 34 4 8 22 3 3 5 5 6 10 13 16 17 22 25 27 29 30 31 33 34 35 36 38 LCS_GDT F 35 F 35 4 8 22 3 4 5 6 7 10 13 16 18 22 25 27 29 30 31 33 34 35 37 38 LCS_GDT W 36 W 36 6 8 22 4 4 6 7 8 10 13 16 18 22 25 27 29 30 31 33 34 35 37 38 LCS_GDT I 37 I 37 6 9 22 4 5 6 7 8 9 10 13 16 22 25 27 29 30 31 33 34 35 37 38 LCS_GDT S 38 S 38 6 9 22 4 5 6 8 8 9 13 16 18 22 25 27 29 30 31 33 34 35 37 38 LCS_GDT S 39 S 39 6 9 22 4 5 6 6 8 10 12 15 18 22 25 27 29 30 31 33 34 35 37 38 LCS_GDT F 40 F 40 6 9 22 4 5 6 7 8 9 10 13 18 19 23 26 29 30 31 33 34 35 37 38 LCS_GDT I 41 I 41 6 9 22 4 5 6 7 8 9 10 15 18 22 25 27 29 30 31 33 34 35 37 38 LCS_GDT G 42 G 42 5 9 22 0 4 5 7 8 9 10 13 15 19 23 27 29 30 31 33 34 35 37 38 LCS_GDT R 43 R 43 5 9 22 3 4 5 7 8 9 10 13 15 16 18 19 25 29 30 31 32 34 36 37 LCS_GDT S 44 S 44 5 9 22 3 3 5 7 8 9 10 12 14 16 17 18 19 20 21 23 29 30 30 31 LCS_GDT K 45 K 45 4 9 22 3 3 4 6 8 9 10 12 12 13 16 17 19 19 21 21 23 24 25 27 LCS_AVERAGE LCS_A: 27.07 ( 12.86 20.76 47.57 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 7 9 10 12 13 13 16 18 22 25 27 29 30 31 33 34 35 37 38 GDT PERCENT_AT 13.64 15.91 20.45 22.73 27.27 29.55 29.55 36.36 40.91 50.00 56.82 61.36 65.91 68.18 70.45 75.00 77.27 79.55 84.09 86.36 GDT RMS_LOCAL 0.33 0.42 0.93 1.18 1.65 1.80 1.80 2.93 3.22 3.65 3.97 4.27 4.46 4.59 4.87 5.13 5.27 5.42 5.98 6.14 GDT RMS_ALL_AT 16.91 16.76 16.98 16.82 16.75 16.82 16.82 9.23 8.99 9.09 9.11 8.90 8.94 8.78 8.41 8.44 8.38 8.40 8.14 8.17 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 27 E 27 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 3.022 0 0.658 0.631 4.572 24.545 20.000 - LGA V 3 V 3 4.092 0 0.070 1.063 8.220 15.000 8.571 8.220 LGA Q 4 Q 4 3.325 0 0.091 0.882 9.309 26.364 11.919 9.309 LGA G 5 G 5 0.982 0 0.092 0.092 1.763 65.909 65.909 - LGA P 6 P 6 2.429 0 0.156 0.442 3.819 33.636 31.948 2.560 LGA W 7 W 7 3.706 0 0.312 1.221 11.665 13.636 4.805 11.665 LGA V 8 V 8 4.867 0 0.674 0.759 5.867 3.182 4.416 5.823 LGA G 9 G 9 9.572 0 0.385 0.385 10.251 0.000 0.000 - LGA S 10 S 10 12.311 0 0.537 0.497 14.243 0.000 0.000 13.528 LGA S 11 S 11 11.342 0 0.062 0.664 12.236 0.000 0.000 12.149 LGA Y 12 Y 12 7.808 0 0.079 1.195 16.633 0.000 0.000 16.633 LGA V 13 V 13 7.420 0 0.636 0.691 8.412 0.000 0.000 7.879 LGA A 14 A 14 6.491 0 0.569 0.567 8.311 1.818 1.455 - LGA E 15 E 15 1.315 0 0.041 1.389 4.057 41.364 28.081 3.148 LGA T 16 T 16 1.706 0 0.157 0.288 4.667 55.000 38.182 3.089 LGA G 17 G 17 3.225 0 0.270 0.270 4.834 17.273 17.273 - LGA Q 18 Q 18 3.723 0 0.640 1.291 6.305 7.727 7.677 5.272 LGA N 19 N 19 7.002 0 0.030 0.173 12.802 0.000 0.000 11.655 LGA W 20 W 20 5.718 0 0.614 0.501 16.033 3.182 0.909 16.033 LGA A 21 A 21 2.471 0 0.028 0.034 4.567 21.364 19.273 - LGA S 22 S 22 4.994 0 0.021 0.179 8.534 3.182 2.121 8.379 LGA L 23 L 23 10.284 0 0.046 0.893 15.467 0.000 0.000 14.607 LGA A 24 A 24 9.553 0 0.025 0.025 12.940 0.000 0.000 - LGA A 25 A 25 9.965 0 0.126 0.137 13.745 0.000 0.000 - LGA N 26 N 26 15.430 0 0.024 1.074 19.360 0.000 0.000 17.738 LGA E 27 E 27 19.758 0 0.073 1.312 22.376 0.000 0.000 21.523 LGA L 28 L 28 18.649 0 0.485 0.603 19.871 0.000 0.000 15.053 LGA R 29 R 29 17.143 0 0.476 1.446 25.043 0.000 0.000 25.043 LGA V 30 V 30 10.472 0 0.163 1.097 12.842 0.000 0.000 8.400 LGA T 31 T 31 7.477 0 0.305 0.345 10.847 0.455 0.260 9.563 LGA E 32 E 32 3.008 0 0.576 1.450 7.210 35.000 15.758 6.752 LGA R 33 R 33 5.304 0 0.646 1.461 11.201 2.727 0.992 11.201 LGA P 34 P 34 3.729 0 0.040 0.062 5.125 7.273 7.532 4.163 LGA F 35 F 35 3.159 0 0.669 1.238 3.921 20.909 24.132 3.659 LGA W 36 W 36 1.873 0 0.617 1.239 5.171 33.182 13.636 5.090 LGA I 37 I 37 5.532 0 0.070 1.546 11.190 5.000 2.500 11.190 LGA S 38 S 38 2.927 0 0.069 0.621 5.311 44.091 29.697 5.311 LGA S 39 S 39 4.940 0 0.120 0.702 8.129 10.000 6.667 6.145 LGA F 40 F 40 8.917 0 0.076 1.508 16.267 0.000 0.000 16.267 LGA I 41 I 41 5.851 0 0.608 0.503 7.322 0.000 0.455 7.322 LGA G 42 G 42 7.326 0 0.490 0.490 9.964 0.000 0.000 - LGA R 43 R 43 11.819 0 0.653 1.588 19.315 0.000 0.000 19.315 LGA S 44 S 44 17.144 0 0.132 0.661 20.026 0.000 0.000 18.329 LGA K 45 K 45 23.128 0 0.141 0.403 28.115 0.000 0.000 28.115 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 8.013 8.013 9.473 11.178 8.277 2.286 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 16 2.93 37.500 34.099 0.528 LGA_LOCAL RMSD: 2.932 Number of atoms: 16 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 9.231 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 8.013 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.465409 * X + -0.685431 * Y + 0.559981 * Z + 17.882420 Y_new = 0.829067 * X + 0.559129 * Y + -0.004663 * Z + 51.086502 Z_new = -0.309906 * X + 0.466433 * Y + 0.828492 * Z + -1.486719 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.059270 0.315094 0.512761 [DEG: 60.6917 18.0536 29.3791 ] ZXZ: 1.562470 0.594387 -0.586444 [DEG: 89.5229 34.0559 -33.6007 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS497_3-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS497_3-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 16 2.93 34.099 8.01 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS497_3-D1 PFRMAT TS TARGET T0953s2 MODEL 3 PARENT N/A ATOM 12 N ALA 2 11.383 35.708 12.157 1.00 6.00 N ATOM 14 CA ALA 2 11.844 35.625 10.759 1.00 6.00 C ATOM 15 CB ALA 2 10.934 34.696 9.967 1.00 6.00 C ATOM 16 C ALA 2 11.967 36.981 10.044 1.00 6.00 C ATOM 17 O ALA 2 12.841 37.144 9.186 1.00 6.00 O ATOM 18 N VAL 3 11.113 37.947 10.435 1.00 6.21 N ATOM 20 CA VAL 3 11.014 39.340 9.903 1.00 6.21 C ATOM 21 CB VAL 3 12.020 40.355 10.644 1.00 6.21 C ATOM 22 CG1 VAL 3 13.488 40.133 10.231 1.00 6.21 C ATOM 23 CG2 VAL 3 11.585 41.820 10.468 1.00 6.21 C ATOM 24 C VAL 3 10.979 39.517 8.354 1.00 6.21 C ATOM 25 O VAL 3 11.727 38.852 7.628 1.00 6.21 O ATOM 26 N GLN 4 10.111 40.432 7.885 1.00 5.18 N ATOM 28 CA GLN 4 9.870 40.785 6.456 1.00 5.18 C ATOM 29 CB GLN 4 11.101 41.445 5.796 1.00 5.18 C ATOM 30 CG GLN 4 11.438 42.834 6.323 1.00 5.18 C ATOM 31 CD GLN 4 12.620 43.458 5.609 1.00 5.18 C ATOM 32 OE1 GLN 4 12.457 44.155 4.608 1.00 5.18 O ATOM 33 NE2 GLN 4 13.821 43.208 6.120 1.00 5.18 N ATOM 36 C GLN 4 9.326 39.645 5.574 1.00 5.18 C ATOM 37 O GLN 4 9.388 38.474 5.965 1.00 5.18 O ATOM 38 N GLY 5 8.803 39.999 4.393 1.00 4.51 N ATOM 40 CA GLY 5 8.225 39.034 3.463 1.00 4.51 C ATOM 41 C GLY 5 9.160 38.120 2.664 1.00 4.51 C ATOM 42 O GLY 5 10.344 38.461 2.555 1.00 4.51 O ATOM 43 N PRO 6 8.690 36.956 2.110 1.00 6.97 N ATOM 44 CD PRO 6 9.555 36.239 1.149 1.00 6.97 C ATOM 45 CA PRO 6 7.347 36.329 2.116 1.00 6.97 C ATOM 46 CB PRO 6 7.486 35.192 1.100 1.00 6.97 C ATOM 47 CG PRO 6 8.549 35.676 0.175 1.00 6.97 C ATOM 48 C PRO 6 6.865 35.793 3.483 1.00 6.97 C ATOM 49 O PRO 6 5.709 36.020 3.854 1.00 6.97 O ATOM 50 N TRP 7 7.757 35.106 4.212 1.00 7.16 N ATOM 52 CA TRP 7 7.461 34.536 5.539 1.00 7.16 C ATOM 53 CB TRP 7 7.856 33.034 5.617 1.00 7.16 C ATOM 54 CG TRP 7 9.204 32.617 4.957 1.00 7.16 C ATOM 55 CD2 TRP 7 10.512 32.579 5.572 1.00 7.16 C ATOM 56 CE2 TRP 7 11.423 32.101 4.587 1.00 7.16 C ATOM 57 CE3 TRP 7 11.006 32.901 6.857 1.00 7.16 C ATOM 58 CD1 TRP 7 9.384 32.173 3.667 1.00 7.16 C ATOM 59 NE1 TRP 7 10.704 31.865 3.444 1.00 7.16 N ATOM 61 CZ2 TRP 7 12.806 31.934 4.842 1.00 7.16 C ATOM 62 CZ3 TRP 7 12.390 32.735 7.116 1.00 7.16 C ATOM 63 CH2 TRP 7 13.269 32.255 6.106 1.00 7.16 C ATOM 64 C TRP 7 8.082 35.332 6.699 1.00 7.16 C ATOM 65 O TRP 7 9.285 35.626 6.691 1.00 7.16 O ATOM 66 N VAL 8 7.228 35.692 7.667 1.00 6.67 N ATOM 68 CA VAL 8 7.589 36.457 8.878 1.00 6.67 C ATOM 69 CB VAL 8 6.746 37.797 9.010 1.00 6.67 C ATOM 70 CG1 VAL 8 7.319 38.713 10.086 1.00 6.67 C ATOM 71 CG2 VAL 8 6.709 38.532 7.692 1.00 6.67 C ATOM 72 C VAL 8 7.325 35.523 10.075 1.00 6.67 C ATOM 73 O VAL 8 6.408 34.694 10.026 1.00 6.67 O ATOM 74 N GLY 9 8.173 35.620 11.103 1.00 5.36 N ATOM 76 CA GLY 9 8.030 34.798 12.297 1.00 5.36 C ATOM 77 C GLY 9 7.709 35.614 13.539 1.00 5.36 C ATOM 78 O GLY 9 7.849 35.106 14.657 1.00 5.36 O ATOM 79 N SER 10 7.254 36.858 13.333 1.00 5.67 N ATOM 81 CA SER 10 6.900 37.800 14.410 1.00 5.67 C ATOM 82 CB SER 10 7.625 39.140 14.190 1.00 5.67 C ATOM 83 OG SER 10 7.270 39.741 12.960 1.00 5.67 O ATOM 85 C SER 10 5.376 38.017 14.574 1.00 5.67 C ATOM 86 O SER 10 4.598 37.074 14.395 1.00 5.67 O ATOM 87 N SER 11 4.977 39.248 14.934 1.00 5.93 N ATOM 89 CA SER 11 3.579 39.673 15.143 1.00 5.93 C ATOM 90 OG SER 11 4.189 41.002 17.090 1.00 5.93 O ATOM 92 C SER 11 2.722 39.707 13.864 1.00 5.93 C ATOM 93 O SER 11 1.527 39.386 13.915 1.00 5.93 O ATOM 94 CB SER 11 3.543 41.043 15.829 1.00 5.93 C ATOM 95 N TYR 12 3.341 40.090 12.734 1.00 6.85 N ATOM 97 CA TYR 12 2.679 40.184 11.411 1.00 6.85 C ATOM 98 CB TYR 12 3.623 40.852 10.370 1.00 6.85 C ATOM 99 CG TYR 12 4.509 42.012 10.864 1.00 6.85 C ATOM 100 CD1 TYR 12 4.006 43.330 10.994 1.00 6.85 C ATOM 101 CE1 TYR 12 4.834 44.401 11.428 1.00 6.85 C ATOM 102 CD2 TYR 12 5.872 41.797 11.180 1.00 6.85 C ATOM 103 CE2 TYR 12 6.709 42.863 11.614 1.00 6.85 C ATOM 104 CZ TYR 12 6.180 44.157 11.734 1.00 6.85 C ATOM 105 OH TYR 12 6.985 45.192 12.154 1.00 6.85 O ATOM 107 C TYR 12 2.258 38.779 10.924 1.00 6.85 C ATOM 108 O TYR 12 1.126 38.591 10.465 1.00 6.85 O ATOM 109 N VAL 13 3.194 37.819 11.025 1.00 6.56 N ATOM 111 CA VAL 13 3.033 36.381 10.680 1.00 6.56 C ATOM 112 CB VAL 13 3.374 36.011 9.161 1.00 6.56 C ATOM 113 CG1 VAL 13 3.031 34.541 8.854 1.00 6.56 C ATOM 114 CG2 VAL 13 2.619 36.913 8.184 1.00 6.56 C ATOM 115 C VAL 13 4.046 35.703 11.634 1.00 6.56 C ATOM 116 O VAL 13 5.110 36.275 11.902 1.00 6.56 O ATOM 117 N ALA 14 3.684 34.537 12.187 1.00 6.25 N ATOM 119 CA ALA 14 4.532 33.777 13.126 1.00 6.25 C ATOM 120 CB ALA 14 4.028 33.942 14.573 1.00 6.25 C ATOM 121 C ALA 14 4.693 32.290 12.783 1.00 6.25 C ATOM 122 O ALA 14 4.017 31.780 11.886 1.00 6.25 O ATOM 123 N GLU 15 5.610 31.630 13.507 1.00 5.98 N ATOM 125 CA GLU 15 5.953 30.195 13.401 1.00 5.98 C ATOM 126 CB GLU 15 7.262 29.900 14.148 1.00 5.98 C ATOM 127 CG GLU 15 8.513 30.496 13.507 1.00 5.98 C ATOM 128 CD GLU 15 9.778 30.177 14.282 1.00 5.98 C ATOM 129 OE1 GLU 15 10.409 29.138 13.994 1.00 5.98 O ATOM 130 OE2 GLU 15 10.144 30.967 15.179 1.00 5.98 O ATOM 131 C GLU 15 4.851 29.230 13.887 1.00 5.98 C ATOM 132 O GLU 15 4.709 28.125 13.348 1.00 5.98 O ATOM 133 N THR 16 4.079 29.675 14.890 1.00 6.41 N ATOM 135 CA THR 16 3.003 28.902 15.555 1.00 6.41 C ATOM 136 CB THR 16 2.389 29.719 16.732 1.00 6.41 C ATOM 137 OG1 THR 16 2.019 31.025 16.271 1.00 6.41 O ATOM 139 CG2 THR 16 3.382 29.844 17.883 1.00 6.41 C ATOM 140 C THR 16 1.843 28.307 14.722 1.00 6.41 C ATOM 141 O THR 16 1.518 27.126 14.905 1.00 6.41 O ATOM 142 N GLY 17 1.245 29.088 13.816 1.00 7.04 N ATOM 144 CA GLY 17 0.152 28.572 12.997 1.00 7.04 C ATOM 145 C GLY 17 -0.997 29.514 12.687 1.00 7.04 C ATOM 146 O GLY 17 -1.374 29.636 11.515 1.00 7.04 O ATOM 147 N GLN 18 -1.571 30.149 13.720 1.00 7.17 N ATOM 149 CA GLN 18 -2.692 31.107 13.574 1.00 7.17 C ATOM 150 CB GLN 18 -3.265 31.525 14.947 1.00 7.17 C ATOM 151 CG GLN 18 -2.253 31.899 16.053 1.00 7.17 C ATOM 152 CD GLN 18 -2.928 32.290 17.353 1.00 7.17 C ATOM 153 OE1 GLN 18 -3.189 31.445 18.209 1.00 7.17 O ATOM 154 NE2 GLN 18 -3.215 33.578 17.508 1.00 7.17 N ATOM 157 C GLN 18 -2.257 32.329 12.744 1.00 7.17 C ATOM 158 O GLN 18 -3.045 32.895 11.978 1.00 7.17 O ATOM 159 N ASN 19 -1.015 32.761 12.984 1.00 6.37 N ATOM 161 CA ASN 19 -0.368 33.859 12.256 1.00 6.37 C ATOM 162 CB ASN 19 0.808 34.417 13.039 1.00 6.37 C ATOM 163 CG ASN 19 0.388 35.099 14.338 1.00 6.37 C ATOM 164 OD1 ASN 19 0.320 34.464 15.393 1.00 6.37 O ATOM 165 ND2 ASN 19 0.125 36.401 14.269 1.00 6.37 N ATOM 168 C ASN 19 0.002 33.405 10.824 1.00 6.37 C ATOM 169 O ASN 19 0.055 34.225 9.905 1.00 6.37 O ATOM 170 N TRP 20 0.340 32.111 10.668 1.00 6.51 N ATOM 172 CA TRP 20 0.629 31.495 9.347 1.00 6.51 C ATOM 173 CB TRP 20 1.068 30.020 9.473 1.00 6.51 C ATOM 174 CG TRP 20 2.559 29.735 9.738 1.00 6.51 C ATOM 175 CD2 TRP 20 3.685 29.988 8.862 1.00 6.51 C ATOM 176 CE2 TRP 20 4.843 29.481 9.517 1.00 6.51 C ATOM 177 CE3 TRP 20 3.830 30.590 7.591 1.00 6.51 C ATOM 178 CD1 TRP 20 3.076 29.111 10.842 1.00 6.51 C ATOM 179 NE1 TRP 20 4.436 28.956 10.715 1.00 6.51 N ATOM 181 CZ2 TRP 20 6.137 29.556 8.947 1.00 6.51 C ATOM 182 CZ3 TRP 20 5.124 30.667 7.017 1.00 6.51 C ATOM 183 CH2 TRP 20 6.258 30.149 7.702 1.00 6.51 C ATOM 184 C TRP 20 -0.703 31.574 8.573 1.00 6.51 C ATOM 185 O TRP 20 -0.721 31.716 7.344 1.00 6.51 O ATOM 186 N ALA 21 -1.803 31.448 9.332 1.00 6.84 N ATOM 188 CA ALA 21 -3.191 31.550 8.846 1.00 6.84 C ATOM 189 CB ALA 21 -4.175 31.156 9.930 1.00 6.84 C ATOM 190 C ALA 21 -3.435 32.999 8.388 1.00 6.84 C ATOM 191 O ALA 21 -4.260 33.231 7.503 1.00 6.84 O ATOM 192 N SER 22 -2.773 33.960 9.060 1.00 5.85 N ATOM 194 CA SER 22 -2.845 35.402 8.729 1.00 5.85 C ATOM 195 CB SER 22 -2.149 36.266 9.794 1.00 5.85 C ATOM 196 OG SER 22 -0.742 36.336 9.633 1.00 5.85 O ATOM 198 C SER 22 -2.213 35.631 7.340 1.00 5.85 C ATOM 199 O SER 22 -2.702 36.454 6.550 1.00 5.85 O ATOM 200 N LEU 23 -1.146 34.859 7.066 1.00 4.73 N ATOM 202 CA LEU 23 -0.399 34.865 5.791 1.00 4.73 C ATOM 203 CB LEU 23 0.848 33.933 5.895 1.00 4.73 C ATOM 204 CG LEU 23 2.143 33.740 5.048 1.00 4.73 C ATOM 205 CD1 LEU 23 1.873 33.414 3.569 1.00 4.73 C ATOM 206 CD2 LEU 23 3.104 34.918 5.184 1.00 4.73 C ATOM 207 C LEU 23 -1.387 34.333 4.730 1.00 4.73 C ATOM 208 O LEU 23 -1.381 34.793 3.589 1.00 4.73 O ATOM 209 N ALA 24 -2.187 33.336 5.139 1.00 5.62 N ATOM 211 CA ALA 24 -3.254 32.684 4.348 1.00 5.62 C ATOM 212 CB ALA 24 -3.691 31.392 5.052 1.00 5.62 C ATOM 213 C ALA 24 -4.465 33.633 4.161 1.00 5.62 C ATOM 214 O ALA 24 -5.107 33.647 3.105 1.00 5.62 O ATOM 215 N ALA 25 -4.725 34.418 5.219 1.00 6.62 N ATOM 217 CA ALA 25 -5.805 35.421 5.378 1.00 6.62 C ATOM 218 CB ALA 25 -5.791 35.990 6.785 1.00 6.62 C ATOM 219 C ALA 25 -5.834 36.568 4.372 1.00 6.62 C ATOM 220 O ALA 25 -6.901 37.141 4.128 1.00 6.62 O ATOM 221 N ASN 26 -4.657 36.937 3.847 1.00 6.77 N ATOM 223 CA ASN 26 -4.503 38.047 2.886 1.00 6.77 C ATOM 224 CB ASN 26 -3.038 38.144 2.404 1.00 6.77 C ATOM 225 CG ASN 26 -2.596 36.960 1.516 1.00 6.77 C ATOM 226 OD1 ASN 26 -1.958 37.165 0.483 1.00 6.77 O ATOM 227 ND2 ASN 26 -2.933 35.735 1.916 1.00 6.77 N ATOM 230 C ASN 26 -5.463 37.912 1.686 1.00 6.77 C ATOM 231 O ASN 26 -5.975 38.918 1.193 1.00 6.77 O ATOM 232 N GLU 27 -5.706 36.664 1.259 1.00 7.25 N ATOM 234 CA GLU 27 -6.627 36.334 0.154 1.00 7.25 C ATOM 235 CG GLU 27 -5.442 33.981 -0.070 1.00 7.25 C ATOM 236 CD GLU 27 -4.899 32.970 -1.062 1.00 7.25 C ATOM 237 OE1 GLU 27 -5.667 32.082 -1.490 1.00 7.25 O ATOM 238 OE2 GLU 27 -3.704 33.063 -1.414 1.00 7.25 O ATOM 239 C GLU 27 -8.032 35.961 0.697 1.00 7.25 C ATOM 240 O GLU 27 -9.004 35.885 -0.068 1.00 7.25 O ATOM 241 CB GLU 27 -6.039 35.228 -0.758 1.00 7.25 C ATOM 242 N LEU 28 -8.109 35.770 2.025 1.00 8.49 N ATOM 244 CA LEU 28 -9.343 35.417 2.757 1.00 8.49 C ATOM 245 CB LEU 28 -9.113 34.164 3.642 1.00 8.49 C ATOM 246 CG LEU 28 -8.872 32.772 3.028 1.00 8.49 C ATOM 247 CD1 LEU 28 -7.785 32.063 3.819 1.00 8.49 C ATOM 248 CD2 LEU 28 -10.154 31.921 2.997 1.00 8.49 C ATOM 249 C LEU 28 -9.862 36.612 3.595 1.00 8.49 C ATOM 250 O LEU 28 -10.608 37.444 3.066 1.00 8.49 O ATOM 251 N ARG 29 -9.471 36.689 4.882 1.00 8.80 N ATOM 253 CA ARG 29 -9.858 37.760 5.834 1.00 8.80 C ATOM 254 CB ARG 29 -11.341 37.641 6.291 1.00 8.80 C ATOM 255 CG ARG 29 -11.843 36.235 6.688 1.00 8.80 C ATOM 256 CD ARG 29 -13.304 36.268 7.111 1.00 8.80 C ATOM 257 NE ARG 29 -13.797 34.944 7.492 1.00 8.80 N ATOM 259 CZ ARG 29 -15.037 34.675 7.905 1.00 8.80 C ATOM 260 NH1 ARG 29 -15.365 33.430 8.222 1.00 8.80 N ATOM 263 NH2 ARG 29 -15.953 35.634 8.005 1.00 8.80 N ATOM 266 C ARG 29 -8.917 37.832 7.059 1.00 8.80 C ATOM 267 O ARG 29 -8.642 36.802 7.687 1.00 8.80 O ATOM 268 N VAL 30 -8.458 39.049 7.393 1.00 7.47 N ATOM 270 CA VAL 30 -7.547 39.320 8.534 1.00 7.47 C ATOM 271 CB VAL 30 -6.478 40.430 8.180 1.00 7.47 C ATOM 272 CG1 VAL 30 -5.532 39.908 7.103 1.00 7.47 C ATOM 273 CG2 VAL 30 -7.145 41.733 7.681 1.00 7.47 C ATOM 274 C VAL 30 -8.328 39.629 9.841 1.00 7.47 C ATOM 275 O VAL 30 -9.469 40.102 9.765 1.00 7.47 O ATOM 276 N THR 31 -7.716 39.370 11.010 1.00 6.97 N ATOM 278 CA THR 31 -8.374 39.557 12.323 1.00 6.97 C ATOM 279 CB THR 31 -8.351 38.233 13.164 1.00 6.97 C ATOM 280 OG1 THR 31 -7.011 37.731 13.235 1.00 6.97 O ATOM 282 CG2 THR 31 -9.262 37.179 12.545 1.00 6.97 C ATOM 283 C THR 31 -8.084 40.754 13.267 1.00 6.97 C ATOM 284 O THR 31 -8.896 41.686 13.316 1.00 6.97 O ATOM 285 N GLU 32 -6.954 40.734 13.994 1.00 7.72 N ATOM 287 CA GLU 32 -6.611 41.767 14.999 1.00 7.72 C ATOM 288 CB GLU 32 -5.998 41.112 16.261 1.00 7.72 C ATOM 289 CG GLU 32 -4.784 40.189 16.049 1.00 7.72 C ATOM 290 CD GLU 32 -4.262 39.601 17.346 1.00 7.72 C ATOM 291 OE1 GLU 32 -4.730 38.511 17.738 1.00 7.72 O ATOM 292 OE2 GLU 32 -3.384 40.228 17.974 1.00 7.72 O ATOM 293 C GLU 32 -5.904 43.110 14.696 1.00 7.72 C ATOM 294 O GLU 32 -6.521 44.164 14.895 1.00 7.72 O ATOM 295 N ARG 33 -4.640 43.076 14.240 1.00 11.19 N ATOM 297 CA ARG 33 -3.822 44.288 13.963 1.00 11.19 C ATOM 298 CB ARG 33 -2.409 43.913 13.462 1.00 11.19 C ATOM 299 CG ARG 33 -1.518 43.274 14.531 1.00 11.19 C ATOM 300 CD ARG 33 -0.071 43.110 14.072 1.00 11.19 C ATOM 301 NE ARG 33 0.625 44.394 13.933 1.00 11.19 N ATOM 303 CZ ARG 33 1.946 44.545 13.831 1.00 11.19 C ATOM 304 NH1 ARG 33 2.457 45.763 13.709 1.00 11.19 N ATOM 307 NH2 ARG 33 2.763 43.496 13.855 1.00 11.19 N ATOM 310 C ARG 33 -4.434 45.441 13.107 1.00 11.19 C ATOM 311 O ARG 33 -4.328 46.599 13.527 1.00 11.19 O ATOM 312 N PRO 34 -5.051 45.166 11.906 1.00 12.24 N ATOM 313 CD PRO 34 -5.822 46.306 11.360 1.00 12.24 C ATOM 314 CA PRO 34 -5.335 43.964 11.085 1.00 12.24 C ATOM 315 CB PRO 34 -6.289 44.496 10.012 1.00 12.24 C ATOM 316 CG PRO 34 -6.985 45.616 10.688 1.00 12.24 C ATOM 317 C PRO 34 -4.051 43.413 10.440 1.00 12.24 C ATOM 318 O PRO 34 -3.074 44.155 10.301 1.00 12.24 O ATOM 319 N PHE 35 -4.037 42.121 10.100 1.00 11.04 N ATOM 321 CA PHE 35 -2.873 41.469 9.481 1.00 11.04 C ATOM 322 CB PHE 35 -2.913 39.933 9.605 1.00 11.04 C ATOM 323 CG PHE 35 -2.857 39.411 11.039 1.00 11.04 C ATOM 324 CD1 PHE 35 -4.028 38.941 11.677 1.00 11.04 C ATOM 325 CD2 PHE 35 -1.627 39.325 11.739 1.00 11.04 C ATOM 326 CE1 PHE 35 -3.978 38.389 12.986 1.00 11.04 C ATOM 327 CE2 PHE 35 -1.563 38.777 13.048 1.00 11.04 C ATOM 328 CZ PHE 35 -2.741 38.308 13.673 1.00 11.04 C ATOM 329 C PHE 35 -2.516 41.921 8.060 1.00 11.04 C ATOM 330 O PHE 35 -1.345 41.861 7.694 1.00 11.04 O ATOM 331 N TRP 36 -3.517 42.350 7.271 1.00 9.79 N ATOM 333 CA TRP 36 -3.336 42.822 5.873 1.00 9.79 C ATOM 334 CB TRP 36 -4.710 43.229 5.272 1.00 9.79 C ATOM 335 CG TRP 36 -4.729 43.807 3.823 1.00 9.79 C ATOM 336 CD2 TRP 36 -4.533 43.097 2.578 1.00 9.79 C ATOM 337 CE2 TRP 36 -4.664 44.050 1.528 1.00 9.79 C ATOM 338 CE3 TRP 36 -4.258 41.750 2.245 1.00 9.79 C ATOM 339 CD1 TRP 36 -4.961 45.115 3.474 1.00 9.79 C ATOM 340 NE1 TRP 36 -4.923 45.263 2.109 1.00 9.79 N ATOM 342 CZ2 TRP 36 -4.531 43.705 0.161 1.00 9.79 C ATOM 343 CZ3 TRP 36 -4.124 41.401 0.877 1.00 9.79 C ATOM 344 CH2 TRP 36 -4.261 42.383 -0.144 1.00 9.79 C ATOM 345 C TRP 36 -2.315 43.988 5.786 1.00 9.79 C ATOM 346 O TRP 36 -1.434 43.964 4.916 1.00 9.79 O ATOM 347 N ILE 37 -2.434 44.976 6.686 1.00 8.33 N ATOM 349 CA ILE 37 -1.506 46.129 6.768 1.00 8.33 C ATOM 350 CB ILE 37 -2.080 47.333 7.610 1.00 8.33 C ATOM 351 CG2 ILE 37 -3.079 48.117 6.748 1.00 8.33 C ATOM 352 CG1 ILE 37 -2.718 46.878 8.939 1.00 8.33 C ATOM 353 CD1 ILE 37 -2.486 47.820 10.128 1.00 8.33 C ATOM 354 C ILE 37 -0.117 45.674 7.274 1.00 8.33 C ATOM 355 O ILE 37 0.922 46.164 6.810 1.00 8.33 O ATOM 356 N SER 38 -0.143 44.702 8.199 1.00 10.80 N ATOM 358 CA SER 38 1.039 44.066 8.818 1.00 10.80 C ATOM 359 CB SER 38 0.596 43.149 9.961 1.00 10.80 C ATOM 360 OG SER 38 -0.164 43.862 10.919 1.00 10.80 O ATOM 362 C SER 38 1.774 43.251 7.738 1.00 10.80 C ATOM 363 O SER 38 3.002 43.106 7.777 1.00 10.80 O ATOM 364 N SER 39 0.974 42.675 6.829 1.00 9.21 N ATOM 366 CA SER 39 1.411 41.872 5.673 1.00 9.21 C ATOM 367 CB SER 39 0.221 41.143 5.048 1.00 9.21 C ATOM 368 OG SER 39 -0.307 40.168 5.932 1.00 9.21 O ATOM 370 C SER 39 2.106 42.756 4.626 1.00 9.21 C ATOM 371 O SER 39 3.037 42.307 3.944 1.00 9.21 O ATOM 372 N PHE 40 1.612 43.998 4.488 1.00 5.53 N ATOM 374 CA PHE 40 2.167 45.018 3.573 1.00 5.53 C ATOM 375 CB PHE 40 1.293 46.300 3.610 1.00 5.53 C ATOM 376 CG PHE 40 1.457 47.230 2.402 1.00 5.53 C ATOM 377 CD1 PHE 40 2.414 48.274 2.418 1.00 5.53 C ATOM 378 CD2 PHE 40 0.631 47.090 1.261 1.00 5.53 C ATOM 379 CE1 PHE 40 2.547 49.165 1.316 1.00 5.53 C ATOM 380 CE2 PHE 40 0.752 47.973 0.153 1.00 5.53 C ATOM 381 CZ PHE 40 1.713 49.014 0.181 1.00 5.53 C ATOM 382 C PHE 40 3.580 45.299 4.123 1.00 5.53 C ATOM 383 O PHE 40 4.527 45.503 3.353 1.00 5.53 O ATOM 384 N ILE 41 3.679 45.314 5.463 1.00 6.58 N ATOM 386 CA ILE 41 4.933 45.491 6.224 1.00 6.58 C ATOM 387 CB ILE 41 4.668 45.855 7.748 1.00 6.58 C ATOM 388 CG2 ILE 41 6.018 46.111 8.492 1.00 6.58 C ATOM 389 CG1 ILE 41 3.804 47.131 7.840 1.00 6.58 C ATOM 390 CD1 ILE 41 2.993 47.307 9.139 1.00 6.58 C ATOM 391 C ILE 41 5.774 44.197 6.079 1.00 6.58 C ATOM 392 O ILE 41 7.005 44.266 5.991 1.00 6.58 O ATOM 393 N GLY 42 5.092 43.044 6.045 1.00 7.80 N ATOM 395 CA GLY 42 5.766 41.756 5.916 1.00 7.80 C ATOM 396 C GLY 42 4.949 40.547 5.478 1.00 7.80 C ATOM 397 O GLY 42 4.261 39.934 6.303 1.00 7.80 O ATOM 398 N ARG 43 5.019 40.231 4.175 1.00 6.29 N ATOM 400 CA ARG 43 4.357 39.083 3.501 1.00 6.29 C ATOM 401 CB ARG 43 2.808 39.158 3.568 1.00 6.29 C ATOM 402 CG ARG 43 2.058 37.854 3.264 1.00 6.29 C ATOM 403 CD ARG 43 0.641 38.130 2.779 1.00 6.29 C ATOM 404 NE ARG 43 0.608 38.708 1.430 1.00 6.29 N ATOM 406 CZ ARG 43 -0.072 39.799 1.074 1.00 6.29 C ATOM 407 NH1 ARG 43 -0.803 40.474 1.957 1.00 6.29 N ATOM 410 NH2 ARG 43 -0.021 40.222 -0.182 1.00 6.29 N ATOM 413 C ARG 43 4.828 39.107 2.026 1.00 6.29 C ATOM 414 O ARG 43 4.632 38.129 1.290 1.00 6.29 O ATOM 415 N SER 44 5.474 40.220 1.630 1.00 6.22 N ATOM 417 CA SER 44 6.023 40.504 0.275 1.00 6.22 C ATOM 418 CB SER 44 7.177 39.544 -0.099 1.00 6.22 C ATOM 419 OG SER 44 7.851 39.956 -1.279 1.00 6.22 O ATOM 421 C SER 44 4.986 40.580 -0.865 1.00 6.22 C ATOM 422 O SER 44 4.176 39.660 -1.043 1.00 6.22 O ATOM 423 N LYS 45 5.015 41.702 -1.599 1.00 6.56 N ATOM 425 CA LYS 45 4.127 41.988 -2.742 1.00 6.56 C ATOM 426 CG LYS 45 1.861 43.219 -3.087 1.00 6.56 C ATOM 427 CD LYS 45 1.073 44.465 -2.716 1.00 6.56 C ATOM 428 CE LYS 45 -0.298 44.467 -3.371 1.00 6.56 C ATOM 429 NZ LYS 45 -1.082 45.682 -3.017 1.00 6.56 N ATOM 433 C LYS 45 5.034 42.252 -3.969 1.00 6.56 C ATOM 434 O LYS 45 6.257 42.085 -3.872 1.00 6.56 O ATOM 435 CB LYS 45 3.245 43.218 -2.426 1.00 6.56 C TER END