####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS497_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS497_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 34 5 - 38 4.99 7.64 LONGEST_CONTINUOUS_SEGMENT: 34 6 - 39 5.00 7.75 LCS_AVERAGE: 71.23 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 27 - 35 1.85 10.31 LONGEST_CONTINUOUS_SEGMENT: 9 28 - 36 1.98 11.00 LCS_AVERAGE: 15.60 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 36 - 41 0.69 12.41 LCS_AVERAGE: 9.81 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 20 0 3 3 3 5 9 11 14 16 20 22 27 32 33 34 36 39 39 40 41 LCS_GDT V 3 V 3 3 7 20 3 3 4 4 7 7 11 13 14 20 25 29 32 33 36 39 40 40 41 42 LCS_GDT Q 4 Q 4 4 7 20 3 3 6 6 7 10 13 15 21 25 27 30 32 34 36 39 40 40 41 42 LCS_GDT G 5 G 5 4 7 34 3 3 6 6 7 10 13 17 21 26 27 30 32 34 36 39 40 40 41 42 LCS_GDT P 6 P 6 4 7 34 2 4 6 6 7 7 12 17 21 26 27 30 32 34 36 39 40 40 41 42 LCS_GDT W 7 W 7 4 7 34 2 4 6 6 7 9 13 16 21 26 27 30 32 34 36 39 40 40 41 42 LCS_GDT V 8 V 8 4 7 34 3 4 7 9 10 10 13 16 20 26 27 30 32 34 36 39 40 40 41 42 LCS_GDT G 9 G 9 4 7 34 3 4 6 7 9 11 14 16 18 22 25 28 32 34 35 37 40 40 41 42 LCS_GDT S 10 S 10 4 6 34 3 4 6 6 6 8 12 14 17 19 24 27 29 34 34 37 39 40 41 42 LCS_GDT S 11 S 11 4 6 34 3 4 5 6 6 8 12 14 17 19 25 30 32 34 35 39 40 40 41 42 LCS_GDT Y 12 Y 12 4 6 34 3 4 5 6 7 8 12 16 20 26 27 30 32 34 36 39 40 40 41 42 LCS_GDT V 13 V 13 4 6 34 3 4 5 6 6 9 11 16 20 26 27 30 32 34 36 39 40 40 41 42 LCS_GDT A 14 A 14 5 6 34 3 5 6 6 7 10 13 17 21 26 27 30 32 34 36 39 40 40 41 42 LCS_GDT E 15 E 15 5 6 34 4 5 6 6 8 10 13 17 21 26 27 30 32 33 36 39 40 40 41 42 LCS_GDT T 16 T 16 5 6 34 4 5 6 6 6 10 12 17 21 26 27 30 32 34 36 39 40 40 41 42 LCS_GDT G 17 G 17 5 6 34 4 5 6 9 10 12 14 17 21 26 27 30 32 34 36 39 40 40 41 42 LCS_GDT Q 18 Q 18 5 6 34 4 5 6 8 8 9 13 16 20 24 27 30 32 34 36 39 40 40 41 42 LCS_GDT N 19 N 19 4 6 34 3 5 6 8 8 9 12 14 17 22 24 29 31 34 36 39 40 40 41 42 LCS_GDT W 20 W 20 4 6 34 3 5 6 8 8 10 13 15 17 22 24 29 32 34 36 39 40 40 41 42 LCS_GDT A 21 A 21 4 6 34 3 5 6 8 8 11 14 16 20 24 27 30 32 34 36 39 40 40 41 42 LCS_GDT S 22 S 22 3 6 34 3 3 4 6 9 9 10 16 20 25 27 30 32 34 36 39 40 40 41 42 LCS_GDT L 23 L 23 3 6 34 4 5 7 9 10 12 14 17 21 26 27 30 32 34 36 39 40 40 41 42 LCS_GDT A 24 A 24 4 5 34 3 4 4 5 9 12 14 17 21 26 27 30 32 34 36 39 40 40 41 42 LCS_GDT A 25 A 25 4 5 34 3 4 5 8 8 12 14 16 21 26 27 30 32 34 36 39 40 40 41 42 LCS_GDT N 26 N 26 4 8 34 1 3 4 8 9 12 14 16 19 26 27 30 32 34 36 39 40 40 41 42 LCS_GDT E 27 E 27 4 9 34 1 3 6 8 9 12 14 16 17 26 27 30 32 34 35 39 40 40 41 42 LCS_GDT L 28 L 28 4 9 34 3 3 5 7 9 12 14 16 18 26 27 30 32 34 35 39 40 40 41 42 LCS_GDT R 29 R 29 4 9 34 3 4 5 9 10 12 14 17 21 26 27 30 32 34 36 39 40 40 41 42 LCS_GDT V 30 V 30 4 9 34 4 4 7 9 10 12 14 17 21 26 27 30 32 34 36 39 40 40 41 42 LCS_GDT T 31 T 31 5 9 34 3 5 7 9 10 12 14 17 21 26 27 30 32 34 36 39 40 40 41 42 LCS_GDT E 32 E 32 5 9 34 4 5 7 9 10 12 14 17 21 26 27 30 32 34 36 39 40 40 41 42 LCS_GDT R 33 R 33 5 9 34 4 5 7 9 10 12 14 17 21 26 27 30 32 34 36 39 40 40 41 42 LCS_GDT P 34 P 34 5 9 34 3 5 7 9 10 12 14 17 21 26 27 30 32 34 36 39 40 40 41 42 LCS_GDT F 35 F 35 5 9 34 3 5 7 9 10 12 14 17 21 26 27 30 32 34 36 39 40 40 41 42 LCS_GDT W 36 W 36 6 9 34 3 5 6 6 9 9 12 14 21 26 27 30 32 34 36 39 40 40 41 42 LCS_GDT I 37 I 37 6 7 34 3 5 6 6 9 11 14 17 21 26 27 30 32 34 36 39 40 40 41 42 LCS_GDT S 38 S 38 6 7 34 3 5 6 6 9 9 14 16 21 25 27 30 32 34 36 39 40 40 41 42 LCS_GDT S 39 S 39 6 7 34 3 5 6 6 9 11 14 17 21 26 27 30 32 34 36 39 40 40 41 42 LCS_GDT F 40 F 40 6 7 30 3 5 6 6 9 10 14 15 19 21 27 30 32 34 36 39 40 40 41 42 LCS_GDT I 41 I 41 6 7 23 3 5 6 6 9 9 12 14 17 20 23 29 32 34 36 39 40 40 41 42 LCS_GDT G 42 G 42 3 7 23 3 3 4 4 6 8 11 14 16 20 23 29 32 34 36 39 40 40 41 42 LCS_GDT R 43 R 43 3 5 23 3 3 4 6 6 8 9 14 17 19 23 29 32 34 36 39 40 40 41 42 LCS_GDT S 44 S 44 3 5 15 3 3 4 4 6 8 8 10 15 17 19 20 23 24 26 30 36 38 40 42 LCS_GDT K 45 K 45 3 5 15 3 3 4 4 6 8 8 10 14 17 18 19 20 21 25 27 29 32 32 33 LCS_AVERAGE LCS_A: 32.21 ( 9.81 15.60 71.23 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 7 9 10 12 14 17 21 26 27 30 32 34 36 39 40 40 41 42 GDT PERCENT_AT 9.09 11.36 15.91 20.45 22.73 27.27 31.82 38.64 47.73 59.09 61.36 68.18 72.73 77.27 81.82 88.64 90.91 90.91 93.18 95.45 GDT RMS_LOCAL 0.28 0.50 1.02 1.33 1.44 2.18 2.44 3.15 3.42 3.83 3.90 4.26 4.64 4.91 5.09 5.43 5.56 5.56 5.73 6.01 GDT RMS_ALL_AT 9.60 12.00 8.61 8.76 8.75 9.50 10.47 7.39 7.35 7.63 7.53 7.09 7.46 7.56 6.76 6.78 6.77 6.77 6.78 6.69 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 7.842 0 0.028 0.027 9.744 2.727 2.182 - LGA V 3 V 3 6.669 0 0.246 0.929 11.210 0.000 0.000 9.140 LGA Q 4 Q 4 5.015 0 0.122 0.871 10.842 9.091 4.040 10.299 LGA G 5 G 5 2.745 0 0.599 0.599 5.551 14.091 14.091 - LGA P 6 P 6 4.303 0 0.087 0.420 5.563 4.091 2.597 5.563 LGA W 7 W 7 4.838 0 0.297 1.185 7.678 2.727 2.208 4.407 LGA V 8 V 8 6.253 0 0.708 0.739 8.336 0.000 0.000 8.336 LGA G 9 G 9 10.536 0 0.540 0.540 11.602 0.000 0.000 - LGA S 10 S 10 12.662 0 0.317 0.674 15.131 0.000 0.000 15.131 LGA S 11 S 11 10.049 0 0.058 0.052 10.783 0.000 0.000 10.588 LGA Y 12 Y 12 5.690 0 0.132 1.524 14.691 0.000 0.000 14.691 LGA V 13 V 13 5.703 0 0.583 0.500 6.934 0.000 0.000 6.588 LGA A 14 A 14 4.165 0 0.612 0.591 5.745 20.000 16.000 - LGA E 15 E 15 2.893 0 0.069 1.375 8.689 32.273 14.343 8.689 LGA T 16 T 16 3.758 0 0.160 0.322 7.694 23.636 13.506 6.142 LGA G 17 G 17 2.660 0 0.263 0.263 5.372 20.909 20.909 - LGA Q 18 Q 18 7.436 0 0.630 1.135 11.813 0.000 0.000 11.813 LGA N 19 N 19 10.828 0 0.161 1.128 15.349 0.000 0.000 15.349 LGA W 20 W 20 8.909 0 0.506 1.175 12.422 0.000 0.000 12.422 LGA A 21 A 21 6.153 0 0.333 0.339 6.880 0.000 0.000 - LGA S 22 S 22 5.912 0 0.231 0.240 6.311 0.455 0.303 5.648 LGA L 23 L 23 2.334 0 0.239 1.297 3.996 26.364 31.818 2.773 LGA A 24 A 24 3.469 0 0.139 0.148 4.922 20.455 17.455 - LGA A 25 A 25 4.267 0 0.092 0.088 4.795 5.000 4.364 - LGA N 26 N 26 5.535 0 0.144 0.624 6.909 0.455 0.227 6.218 LGA E 27 E 27 6.345 0 0.561 1.083 9.249 0.000 0.000 6.651 LGA L 28 L 28 6.584 0 0.694 1.179 8.557 0.000 0.000 8.557 LGA R 29 R 29 3.742 0 0.252 1.036 10.128 17.727 6.942 10.128 LGA V 30 V 30 2.247 0 0.645 0.896 6.254 42.273 28.312 6.254 LGA T 31 T 31 2.043 0 0.595 0.465 5.510 51.364 31.169 4.619 LGA E 32 E 32 1.559 0 0.478 1.126 3.660 41.364 38.586 1.534 LGA R 33 R 33 2.981 0 0.107 1.472 7.315 27.273 16.033 5.909 LGA P 34 P 34 2.712 0 0.701 0.633 4.232 21.818 24.156 2.521 LGA F 35 F 35 2.636 0 0.642 1.264 11.954 25.909 10.413 11.954 LGA W 36 W 36 4.433 0 0.654 1.105 14.241 15.455 4.416 14.152 LGA I 37 I 37 3.926 0 0.089 0.746 6.864 7.273 3.636 5.139 LGA S 38 S 38 4.747 0 0.059 0.646 5.349 3.182 2.121 5.349 LGA S 39 S 39 3.685 0 0.133 0.696 6.026 7.727 15.455 1.724 LGA F 40 F 40 5.862 0 0.108 0.860 8.474 0.455 0.165 6.882 LGA I 41 I 41 9.229 0 0.619 0.484 11.740 0.000 0.000 10.418 LGA G 42 G 42 10.277 0 0.491 0.491 13.399 0.000 0.000 - LGA R 43 R 43 10.826 0 0.428 1.268 12.224 0.000 0.000 7.356 LGA S 44 S 44 16.344 0 0.148 0.670 19.502 0.000 0.000 17.099 LGA K 45 K 45 22.307 0 0.019 0.802 26.293 0.000 0.000 26.293 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 6.639 6.584 7.858 10.093 7.397 4.675 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 17 3.15 39.773 34.163 0.524 LGA_LOCAL RMSD: 3.146 Number of atoms: 17 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 7.394 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 6.639 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.869415 * X + 0.396125 * Y + 0.295301 * Z + 17.190151 Y_new = 0.327693 * X + -0.014998 * Y + -0.944665 * Z + 43.902256 Z_new = -0.369776 * X + 0.918074 * Y + -0.142847 * Z + -5.605284 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.360446 0.378768 1.725153 [DEG: 20.6521 21.7018 98.8440 ] ZXZ: 0.302975 1.714134 -0.382895 [DEG: 17.3592 98.2126 -21.9383 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS497_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS497_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 17 3.15 34.163 6.64 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS497_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT N/A ATOM 12 N ALA 2 10.027 32.023 8.001 1.00 6.09 N ATOM 14 CA ALA 2 10.323 32.373 6.601 1.00 6.09 C ATOM 15 CB ALA 2 9.114 32.074 5.724 1.00 6.09 C ATOM 16 C ALA 2 10.749 33.843 6.446 1.00 6.09 C ATOM 17 O ALA 2 10.427 34.675 7.303 1.00 6.09 O ATOM 18 N VAL 3 11.466 34.140 5.351 1.00 5.24 N ATOM 20 CA VAL 3 11.978 35.488 5.018 1.00 5.24 C ATOM 21 CB VAL 3 13.454 35.423 4.449 1.00 5.24 C ATOM 22 CG1 VAL 3 14.435 35.147 5.581 1.00 5.24 C ATOM 23 CG2 VAL 3 13.604 34.346 3.352 1.00 5.24 C ATOM 24 C VAL 3 11.018 36.301 4.105 1.00 5.24 C ATOM 25 O VAL 3 9.813 36.020 4.100 1.00 5.24 O ATOM 26 N GLN 4 11.546 37.304 3.372 1.00 4.83 N ATOM 28 CA GLN 4 10.816 38.213 2.440 1.00 4.83 C ATOM 29 CB GLN 4 10.062 37.446 1.325 1.00 4.83 C ATOM 30 CG GLN 4 10.967 36.729 0.328 1.00 4.83 C ATOM 31 CD GLN 4 10.192 36.007 -0.758 1.00 4.83 C ATOM 32 OE1 GLN 4 9.838 36.596 -1.780 1.00 4.83 O ATOM 33 NE2 GLN 4 9.929 34.722 -0.545 1.00 4.83 N ATOM 36 C GLN 4 9.871 39.198 3.146 1.00 4.83 C ATOM 37 O GLN 4 9.735 39.152 4.373 1.00 4.83 O ATOM 38 N GLY 5 9.234 40.083 2.364 1.00 4.09 N ATOM 40 CA GLY 5 8.296 41.076 2.884 1.00 4.09 C ATOM 41 C GLY 5 7.043 40.494 3.546 1.00 4.09 C ATOM 42 O GLY 5 6.694 40.979 4.628 1.00 4.09 O ATOM 43 N PRO 6 6.342 39.477 2.950 1.00 5.78 N ATOM 44 CD PRO 6 6.447 38.974 1.561 1.00 5.78 C ATOM 45 CA PRO 6 5.136 38.904 3.582 1.00 5.78 C ATOM 46 CB PRO 6 4.577 37.984 2.496 1.00 5.78 C ATOM 47 CG PRO 6 5.016 38.638 1.235 1.00 5.78 C ATOM 48 C PRO 6 5.376 38.110 4.880 1.00 5.78 C ATOM 49 O PRO 6 4.496 38.079 5.749 1.00 5.78 O ATOM 50 N TRP 7 6.555 37.481 4.996 1.00 6.76 N ATOM 52 CA TRP 7 6.906 36.670 6.173 1.00 6.76 C ATOM 53 CB TRP 7 7.096 35.181 5.765 1.00 6.76 C ATOM 54 CG TRP 7 6.143 34.635 4.651 1.00 6.76 C ATOM 55 CD2 TRP 7 6.343 34.686 3.219 1.00 6.76 C ATOM 56 CE2 TRP 7 5.226 34.039 2.618 1.00 6.76 C ATOM 57 CE3 TRP 7 7.355 35.213 2.384 1.00 6.76 C ATOM 58 CD1 TRP 7 4.948 33.980 4.837 1.00 6.76 C ATOM 59 NE1 TRP 7 4.401 33.624 3.629 1.00 6.76 N ATOM 61 CZ2 TRP 7 5.087 33.902 1.216 1.00 6.76 C ATOM 62 CZ3 TRP 7 7.218 35.077 0.980 1.00 6.76 C ATOM 63 CH2 TRP 7 6.087 34.425 0.416 1.00 6.76 C ATOM 64 C TRP 7 8.148 37.173 6.941 1.00 6.76 C ATOM 65 O TRP 7 9.224 37.365 6.362 1.00 6.76 O ATOM 66 N VAL 8 7.935 37.438 8.238 1.00 5.33 N ATOM 68 CA VAL 8 8.925 37.892 9.248 1.00 5.33 C ATOM 69 CB VAL 8 8.742 39.412 9.679 1.00 5.33 C ATOM 70 CG1 VAL 8 9.835 39.845 10.676 1.00 5.33 C ATOM 71 CG2 VAL 8 8.806 40.325 8.455 1.00 5.33 C ATOM 72 C VAL 8 8.625 36.921 10.407 1.00 5.33 C ATOM 73 O VAL 8 7.464 36.551 10.590 1.00 5.33 O ATOM 74 N GLY 9 9.622 36.572 11.224 1.00 5.55 N ATOM 76 CA GLY 9 9.379 35.599 12.286 1.00 5.55 C ATOM 77 C GLY 9 9.163 36.135 13.690 1.00 5.55 C ATOM 78 O GLY 9 9.979 35.936 14.596 1.00 5.55 O ATOM 79 N SER 10 8.020 36.820 13.822 1.00 6.13 N ATOM 81 CA SER 10 7.473 37.436 15.045 1.00 6.13 C ATOM 82 CB SER 10 8.304 38.638 15.541 1.00 6.13 C ATOM 83 OG SER 10 9.609 38.243 15.926 1.00 6.13 O ATOM 85 C SER 10 6.053 37.892 14.665 1.00 6.13 C ATOM 86 O SER 10 5.086 37.164 14.918 1.00 6.13 O ATOM 87 N SER 11 5.943 39.089 14.067 1.00 7.54 N ATOM 89 CA SER 11 4.677 39.696 13.624 1.00 7.54 C ATOM 90 OG SER 11 3.632 41.888 13.278 1.00 7.54 O ATOM 92 C SER 11 3.994 39.108 12.367 1.00 7.54 C ATOM 93 O SER 11 2.784 38.883 12.389 1.00 7.54 O ATOM 94 CB SER 11 4.868 41.210 13.456 1.00 7.54 C ATOM 95 N TYR 12 4.751 38.939 11.270 1.00 9.08 N ATOM 97 CA TYR 12 4.236 38.417 9.983 1.00 9.08 C ATOM 98 CB TYR 12 5.133 38.903 8.825 1.00 9.08 C ATOM 99 CG TYR 12 5.251 40.423 8.607 1.00 9.08 C ATOM 100 CD1 TYR 12 5.117 40.967 7.315 1.00 9.08 C ATOM 101 CE1 TYR 12 5.288 42.360 7.074 1.00 9.08 C ATOM 102 CD2 TYR 12 5.557 41.320 9.670 1.00 9.08 C ATOM 103 CE2 TYR 12 5.727 42.711 9.439 1.00 9.08 C ATOM 104 CZ TYR 12 5.592 43.219 8.141 1.00 9.08 C ATOM 105 OH TYR 12 5.764 44.566 7.915 1.00 9.08 O ATOM 107 C TYR 12 3.925 36.913 9.804 1.00 9.08 C ATOM 108 O TYR 12 2.788 36.579 9.452 1.00 9.08 O ATOM 109 N VAL 13 4.903 36.032 10.104 1.00 7.56 N ATOM 111 CA VAL 13 4.816 34.542 9.997 1.00 7.56 C ATOM 112 CB VAL 13 4.558 34.038 8.493 1.00 7.56 C ATOM 113 CG1 VAL 13 5.320 32.741 8.148 1.00 7.56 C ATOM 114 CG2 VAL 13 3.069 33.817 8.259 1.00 7.56 C ATOM 115 C VAL 13 6.041 33.817 10.621 1.00 7.56 C ATOM 116 O VAL 13 7.193 34.089 10.251 1.00 7.56 O ATOM 117 N ALA 14 5.767 32.917 11.577 1.00 6.30 N ATOM 119 CA ALA 14 6.774 32.091 12.274 1.00 6.30 C ATOM 120 CB ALA 14 7.069 32.649 13.651 1.00 6.30 C ATOM 121 C ALA 14 6.332 30.619 12.366 1.00 6.30 C ATOM 122 O ALA 14 5.147 30.349 12.559 1.00 6.30 O ATOM 123 N GLU 15 7.299 29.691 12.357 1.00 6.28 N ATOM 125 CA GLU 15 7.065 28.226 12.408 1.00 6.28 C ATOM 126 CB GLU 15 8.387 27.470 12.207 1.00 6.28 C ATOM 127 CG GLU 15 8.920 27.489 10.778 1.00 6.28 C ATOM 128 CD GLU 15 10.187 26.670 10.614 1.00 6.28 C ATOM 129 OE1 GLU 15 10.082 25.465 10.303 1.00 6.28 O ATOM 130 OE2 GLU 15 11.290 27.231 10.793 1.00 6.28 O ATOM 131 C GLU 15 6.308 27.604 13.608 1.00 6.28 C ATOM 132 O GLU 15 5.549 26.644 13.420 1.00 6.28 O ATOM 133 N THR 16 6.500 28.163 14.812 1.00 7.29 N ATOM 135 CA THR 16 5.903 27.666 16.079 1.00 7.29 C ATOM 136 CB THR 16 6.505 28.411 17.302 1.00 7.29 C ATOM 137 OG1 THR 16 6.473 29.823 17.070 1.00 7.29 O ATOM 139 CG2 THR 16 7.940 27.967 17.555 1.00 7.29 C ATOM 140 C THR 16 4.369 27.555 16.273 1.00 7.29 C ATOM 141 O THR 16 3.893 26.509 16.732 1.00 7.29 O ATOM 142 N GLY 17 3.609 28.596 15.912 1.00 7.26 N ATOM 144 CA GLY 17 2.155 28.567 16.073 1.00 7.26 C ATOM 145 C GLY 17 1.602 29.696 16.927 1.00 7.26 C ATOM 146 O GLY 17 0.633 30.354 16.530 1.00 7.26 O ATOM 147 N GLN 18 2.219 29.903 18.100 1.00 6.10 N ATOM 149 CA GLN 18 1.891 30.967 19.082 1.00 6.10 C ATOM 150 CB GLN 18 2.733 30.775 20.354 1.00 6.10 C ATOM 151 CG GLN 18 2.079 31.245 21.656 1.00 6.10 C ATOM 152 CD GLN 18 2.965 31.023 22.867 1.00 6.10 C ATOM 153 OE1 GLN 18 3.742 31.897 23.251 1.00 6.10 O ATOM 154 NE2 GLN 18 2.850 29.848 23.478 1.00 6.10 N ATOM 157 C GLN 18 2.254 32.292 18.360 1.00 6.10 C ATOM 158 O GLN 18 1.951 33.393 18.843 1.00 6.10 O ATOM 159 N ASN 19 3.255 32.096 17.503 1.00 7.27 N ATOM 161 CA ASN 19 3.904 33.033 16.589 1.00 7.27 C ATOM 162 CB ASN 19 5.412 32.757 16.617 1.00 7.27 C ATOM 163 CG ASN 19 6.057 33.117 17.953 1.00 7.27 C ATOM 164 OD1 ASN 19 6.523 34.241 18.149 1.00 7.27 O ATOM 165 ND2 ASN 19 6.104 32.153 18.869 1.00 7.27 N ATOM 168 C ASN 19 3.530 33.595 15.192 1.00 7.27 C ATOM 169 O ASN 19 3.896 34.757 14.964 1.00 7.27 O ATOM 170 N TRP 20 2.818 32.885 14.273 1.00 5.76 N ATOM 172 CA TRP 20 2.750 33.444 12.884 1.00 5.76 C ATOM 173 CB TRP 20 1.889 32.556 11.952 1.00 5.76 C ATOM 174 CG TRP 20 2.430 31.210 11.446 1.00 5.76 C ATOM 175 CD2 TRP 20 1.960 29.893 11.803 1.00 5.76 C ATOM 176 CE2 TRP 20 2.678 28.962 10.998 1.00 5.76 C ATOM 177 CE3 TRP 20 0.997 29.403 12.716 1.00 5.76 C ATOM 178 CD1 TRP 20 3.383 31.017 10.474 1.00 5.76 C ATOM 179 NE1 TRP 20 3.533 29.680 10.207 1.00 5.76 N ATOM 181 CZ2 TRP 20 2.469 27.563 11.077 1.00 5.76 C ATOM 182 CZ3 TRP 20 0.785 28.003 12.794 1.00 5.76 C ATOM 183 CH2 TRP 20 1.524 27.104 11.976 1.00 5.76 C ATOM 184 C TRP 20 2.234 34.884 12.704 1.00 5.76 C ATOM 185 O TRP 20 3.104 35.752 12.592 1.00 5.76 O ATOM 186 N ALA 21 0.929 35.215 12.654 1.00 5.96 N ATOM 188 CA ALA 21 0.639 36.654 12.763 1.00 5.96 C ATOM 189 CB ALA 21 -0.564 37.052 11.936 1.00 5.96 C ATOM 190 C ALA 21 0.301 36.488 14.240 1.00 5.96 C ATOM 191 O ALA 21 1.103 36.791 15.122 1.00 5.96 O ATOM 192 N SER 22 -0.947 36.005 14.456 1.00 5.25 N ATOM 194 CA SER 22 -1.441 35.481 15.723 1.00 5.25 C ATOM 195 CB SER 22 -2.803 36.091 16.028 1.00 5.25 C ATOM 196 OG SER 22 -3.767 35.745 15.055 1.00 5.25 O ATOM 198 C SER 22 -1.477 33.952 15.449 1.00 5.25 C ATOM 199 O SER 22 -0.581 33.243 15.869 1.00 5.25 O ATOM 200 N LEU 23 -2.511 33.453 14.717 1.00 5.90 N ATOM 202 CA LEU 23 -2.509 32.054 14.225 1.00 5.90 C ATOM 203 CB LEU 23 -3.925 31.437 14.329 1.00 5.90 C ATOM 204 CG LEU 23 -4.206 29.916 14.314 1.00 5.90 C ATOM 205 CD1 LEU 23 -4.248 29.316 15.731 1.00 5.90 C ATOM 206 CD2 LEU 23 -5.540 29.681 13.627 1.00 5.90 C ATOM 207 C LEU 23 -2.058 32.264 12.766 1.00 5.90 C ATOM 208 O LEU 23 -0.926 31.950 12.400 1.00 5.90 O ATOM 209 N ALA 24 -3.030 32.672 11.924 1.00 8.53 N ATOM 211 CA ALA 24 -2.777 33.188 10.583 1.00 8.53 C ATOM 212 CB ALA 24 -3.758 32.590 9.595 1.00 8.53 C ATOM 213 C ALA 24 -3.010 34.702 10.798 1.00 8.53 C ATOM 214 O ALA 24 -2.128 35.514 10.555 1.00 8.53 O ATOM 215 N ALA 25 -4.310 35.030 10.980 1.00 8.25 N ATOM 217 CA ALA 25 -4.867 36.346 11.361 1.00 8.25 C ATOM 218 CB ALA 25 -5.921 36.789 10.349 1.00 8.25 C ATOM 219 C ALA 25 -5.349 36.638 12.809 1.00 8.25 C ATOM 220 O ALA 25 -4.834 37.530 13.492 1.00 8.25 O ATOM 221 N ASN 26 -6.334 35.816 13.230 1.00 7.49 N ATOM 223 CA ASN 26 -7.103 35.865 14.506 1.00 7.49 C ATOM 224 CB ASN 26 -8.512 35.303 14.250 1.00 7.49 C ATOM 225 CG ASN 26 -9.332 36.162 13.292 1.00 7.49 C ATOM 226 OD1 ASN 26 -10.038 37.082 13.712 1.00 7.49 O ATOM 227 ND2 ASN 26 -9.255 35.852 12.001 1.00 7.49 N ATOM 230 C ASN 26 -6.692 35.445 15.936 1.00 7.49 C ATOM 231 O ASN 26 -6.878 36.230 16.872 1.00 7.49 O ATOM 232 N GLU 27 -6.128 34.239 16.101 1.00 8.78 N ATOM 234 CA GLU 27 -5.784 33.673 17.429 1.00 8.78 C ATOM 235 CG GLU 27 -7.455 31.705 17.336 1.00 8.78 C ATOM 236 CD GLU 27 -7.610 30.196 17.330 1.00 8.78 C ATOM 237 OE1 GLU 27 -7.608 29.599 16.232 1.00 8.78 O ATOM 238 OE2 GLU 27 -7.737 29.606 18.424 1.00 8.78 O ATOM 239 C GLU 27 -4.475 34.018 18.175 1.00 8.78 C ATOM 240 O GLU 27 -3.409 33.471 17.856 1.00 8.78 O ATOM 241 CB GLU 27 -5.996 32.149 17.420 1.00 8.78 C ATOM 242 N LEU 28 -4.592 34.946 19.146 1.00 11.70 N ATOM 244 CA LEU 28 -3.546 35.474 20.075 1.00 11.70 C ATOM 245 CB LEU 28 -2.081 35.331 19.554 1.00 11.70 C ATOM 246 CG LEU 28 -0.952 34.937 20.532 1.00 11.70 C ATOM 247 CD1 LEU 28 -0.683 33.426 20.513 1.00 11.70 C ATOM 248 CD2 LEU 28 0.310 35.697 20.165 1.00 11.70 C ATOM 249 C LEU 28 -3.853 36.946 20.448 1.00 11.70 C ATOM 250 O LEU 28 -4.873 37.492 20.011 1.00 11.70 O ATOM 251 N ARG 29 -2.966 37.559 21.248 1.00 8.94 N ATOM 253 CA ARG 29 -3.084 38.951 21.730 1.00 8.94 C ATOM 254 CB ARG 29 -2.512 39.064 23.153 1.00 8.94 C ATOM 255 CG ARG 29 -3.335 38.359 24.234 1.00 8.94 C ATOM 256 CD ARG 29 -2.715 38.508 25.623 1.00 8.94 C ATOM 257 NE ARG 29 -1.464 37.757 25.773 1.00 8.94 N ATOM 259 CZ ARG 29 -0.724 37.711 26.880 1.00 8.94 C ATOM 260 NH1 ARG 29 0.392 36.994 26.892 1.00 8.94 N ATOM 263 NH2 ARG 29 -1.082 38.371 27.977 1.00 8.94 N ATOM 266 C ARG 29 -2.443 40.020 20.820 1.00 8.94 C ATOM 267 O ARG 29 -2.761 41.211 20.953 1.00 8.94 O ATOM 268 N VAL 30 -1.585 39.590 19.882 1.00 8.29 N ATOM 270 CA VAL 30 -0.884 40.484 18.928 1.00 8.29 C ATOM 271 CB VAL 30 0.351 39.773 18.220 1.00 8.29 C ATOM 272 CG1 VAL 30 1.515 39.669 19.194 1.00 8.29 C ATOM 273 CG2 VAL 30 -0.013 38.375 17.697 1.00 8.29 C ATOM 274 C VAL 30 -1.818 41.146 17.880 1.00 8.29 C ATOM 275 O VAL 30 -1.468 42.179 17.295 1.00 8.29 O ATOM 276 N THR 31 -3.041 40.603 17.763 1.00 6.59 N ATOM 278 CA THR 31 -4.088 41.057 16.814 1.00 6.59 C ATOM 279 CB THR 31 -5.392 40.220 16.954 1.00 6.59 C ATOM 280 OG1 THR 31 -5.756 40.121 18.337 1.00 6.59 O ATOM 282 CG2 THR 31 -5.209 38.835 16.370 1.00 6.59 C ATOM 283 C THR 31 -4.455 42.559 16.806 1.00 6.59 C ATOM 284 O THR 31 -4.940 43.107 17.809 1.00 6.59 O ATOM 285 N GLU 32 -4.127 43.213 15.683 1.00 6.07 N ATOM 287 CA GLU 32 -4.386 44.642 15.420 1.00 6.07 C ATOM 288 CB GLU 32 -3.105 45.488 15.609 1.00 6.07 C ATOM 289 CG GLU 32 -2.662 45.679 17.058 1.00 6.07 C ATOM 290 CD GLU 32 -1.402 46.514 17.180 1.00 6.07 C ATOM 291 OE1 GLU 32 -0.296 45.932 17.163 1.00 6.07 O ATOM 292 OE2 GLU 32 -1.516 47.753 17.298 1.00 6.07 O ATOM 293 C GLU 32 -4.904 44.748 13.970 1.00 6.07 C ATOM 294 O GLU 32 -4.572 45.698 13.243 1.00 6.07 O ATOM 295 N ARG 33 -5.748 43.779 13.580 1.00 6.76 N ATOM 297 CA ARG 33 -6.356 43.675 12.232 1.00 6.76 C ATOM 298 CB ARG 33 -7.222 42.412 12.121 1.00 6.76 C ATOM 299 CG ARG 33 -6.473 41.085 12.143 1.00 6.76 C ATOM 300 CD ARG 33 -7.410 39.895 11.947 1.00 6.76 C ATOM 301 NE ARG 33 -7.947 39.816 10.584 1.00 6.76 N ATOM 303 CZ ARG 33 -9.010 39.100 10.217 1.00 6.76 C ATOM 304 NH1 ARG 33 -9.397 39.110 8.949 1.00 6.76 N ATOM 307 NH2 ARG 33 -9.695 38.381 11.101 1.00 6.76 N ATOM 310 C ARG 33 -7.199 44.918 11.823 1.00 6.76 C ATOM 311 O ARG 33 -7.693 45.615 12.717 1.00 6.76 O ATOM 312 N PRO 34 -7.371 45.224 10.490 1.00 7.68 N ATOM 313 CD PRO 34 -8.269 46.379 10.272 1.00 7.68 C ATOM 314 CA PRO 34 -6.964 44.687 9.167 1.00 7.68 C ATOM 315 CB PRO 34 -7.565 45.703 8.191 1.00 7.68 C ATOM 316 CG PRO 34 -8.793 46.131 8.877 1.00 7.68 C ATOM 317 C PRO 34 -5.452 44.496 8.910 1.00 7.68 C ATOM 318 O PRO 34 -5.071 43.880 7.909 1.00 7.68 O ATOM 319 N PHE 35 -4.616 44.982 9.839 1.00 8.50 N ATOM 321 CA PHE 35 -3.142 44.899 9.763 1.00 8.50 C ATOM 322 CB PHE 35 -2.481 45.866 10.768 1.00 8.50 C ATOM 323 CG PHE 35 -2.796 47.346 10.536 1.00 8.50 C ATOM 324 CD1 PHE 35 -3.876 47.969 11.206 1.00 8.50 C ATOM 325 CD2 PHE 35 -1.993 48.135 9.675 1.00 8.50 C ATOM 326 CE1 PHE 35 -4.155 49.352 11.025 1.00 8.50 C ATOM 327 CE2 PHE 35 -2.258 49.519 9.484 1.00 8.50 C ATOM 328 CZ PHE 35 -3.343 50.129 10.163 1.00 8.50 C ATOM 329 C PHE 35 -2.492 43.512 9.899 1.00 8.50 C ATOM 330 O PHE 35 -1.512 43.238 9.202 1.00 8.50 O ATOM 331 N TRP 36 -2.999 42.666 10.809 1.00 7.25 N ATOM 333 CA TRP 36 -2.455 41.307 11.028 1.00 7.25 C ATOM 334 CB TRP 36 -2.827 40.771 12.424 1.00 7.25 C ATOM 335 CG TRP 36 -1.664 40.796 13.464 1.00 7.25 C ATOM 336 CD2 TRP 36 -0.881 41.936 13.915 1.00 7.25 C ATOM 337 CE2 TRP 36 0.090 41.436 14.828 1.00 7.25 C ATOM 338 CE3 TRP 36 -0.903 43.322 13.635 1.00 7.25 C ATOM 339 CD1 TRP 36 -1.145 39.710 14.118 1.00 7.25 C ATOM 340 NE1 TRP 36 -0.100 40.084 14.925 1.00 7.25 N ATOM 342 CZ2 TRP 36 1.038 42.272 15.467 1.00 7.25 C ATOM 343 CZ3 TRP 36 0.045 44.161 14.273 1.00 7.25 C ATOM 344 CH2 TRP 36 1.001 43.624 15.179 1.00 7.25 C ATOM 345 C TRP 36 -2.675 40.282 9.897 1.00 7.25 C ATOM 346 O TRP 36 -1.787 39.462 9.624 1.00 7.25 O ATOM 347 N ILE 37 -3.848 40.342 9.246 1.00 8.01 N ATOM 349 CA ILE 37 -4.194 39.485 8.086 1.00 8.01 C ATOM 350 CB ILE 37 -5.766 39.552 7.754 1.00 8.01 C ATOM 351 CG2 ILE 37 -6.226 40.988 7.356 1.00 8.01 C ATOM 352 CG1 ILE 37 -6.243 38.371 6.854 1.00 8.01 C ATOM 353 CD1 ILE 37 -5.996 38.430 5.300 1.00 8.01 C ATOM 354 C ILE 37 -3.277 40.000 6.942 1.00 8.01 C ATOM 355 O ILE 37 -2.758 39.218 6.132 1.00 8.01 O ATOM 356 N SER 38 -3.078 41.328 6.951 1.00 8.36 N ATOM 358 CA SER 38 -2.219 42.072 6.018 1.00 8.36 C ATOM 359 CB SER 38 -2.423 43.585 6.158 1.00 8.36 C ATOM 360 OG SER 38 -3.681 43.982 5.639 1.00 8.36 O ATOM 362 C SER 38 -0.753 41.704 6.270 1.00 8.36 C ATOM 363 O SER 38 0.037 41.725 5.341 1.00 8.36 O ATOM 364 N SER 39 -0.410 41.425 7.541 1.00 6.21 N ATOM 366 CA SER 39 0.944 41.017 7.992 1.00 6.21 C ATOM 367 CB SER 39 1.021 40.920 9.519 1.00 6.21 C ATOM 368 OG SER 39 0.768 42.172 10.132 1.00 6.21 O ATOM 370 C SER 39 1.328 39.671 7.378 1.00 6.21 C ATOM 371 O SER 39 2.500 39.448 7.052 1.00 6.21 O ATOM 372 N PHE 40 0.330 38.783 7.241 1.00 5.07 N ATOM 374 CA PHE 40 0.499 37.456 6.623 1.00 5.07 C ATOM 375 CB PHE 40 -0.827 36.647 6.705 1.00 5.07 C ATOM 376 CG PHE 40 -0.673 35.132 6.523 1.00 5.07 C ATOM 377 CD1 PHE 40 -0.470 34.285 7.638 1.00 5.07 C ATOM 378 CD2 PHE 40 -0.767 34.544 5.238 1.00 5.07 C ATOM 379 CE1 PHE 40 -0.364 32.875 7.482 1.00 5.07 C ATOM 380 CE2 PHE 40 -0.664 33.135 5.066 1.00 5.07 C ATOM 381 CZ PHE 40 -0.462 32.300 6.191 1.00 5.07 C ATOM 382 C PHE 40 0.870 37.778 5.159 1.00 5.07 C ATOM 383 O PHE 40 1.786 37.172 4.598 1.00 5.07 O ATOM 384 N ILE 41 0.132 38.738 4.577 1.00 7.92 N ATOM 386 CA ILE 41 0.330 39.271 3.210 1.00 7.92 C ATOM 387 CB ILE 41 -0.949 40.046 2.700 1.00 7.92 C ATOM 388 CG2 ILE 41 -0.824 40.365 1.176 1.00 7.92 C ATOM 389 CG1 ILE 41 -2.216 39.193 2.920 1.00 7.92 C ATOM 390 CD1 ILE 41 -3.527 39.983 3.096 1.00 7.92 C ATOM 391 C ILE 41 1.589 40.186 3.137 1.00 7.92 C ATOM 392 O ILE 41 2.297 40.193 2.126 1.00 7.92 O ATOM 393 N GLY 42 1.821 40.951 4.213 1.00 7.89 N ATOM 395 CA GLY 42 2.933 41.892 4.309 1.00 7.89 C ATOM 396 C GLY 42 2.491 43.273 4.776 1.00 7.89 C ATOM 397 O GLY 42 2.067 44.090 3.949 1.00 7.89 O ATOM 398 N ARG 43 2.587 43.524 6.091 1.00 6.49 N ATOM 400 CA ARG 43 2.205 44.800 6.736 1.00 6.49 C ATOM 401 CB ARG 43 1.908 44.560 8.243 1.00 6.49 C ATOM 402 CG ARG 43 1.116 45.659 8.967 1.00 6.49 C ATOM 403 CD ARG 43 1.260 45.527 10.475 1.00 6.49 C ATOM 404 NE ARG 43 0.645 46.653 11.183 1.00 6.49 N ATOM 406 CZ ARG 43 0.959 47.047 12.418 1.00 6.49 C ATOM 407 NH1 ARG 43 0.328 48.083 12.952 1.00 6.49 N ATOM 410 NH2 ARG 43 1.896 46.422 13.124 1.00 6.49 N ATOM 413 C ARG 43 3.301 45.888 6.519 1.00 6.49 C ATOM 414 O ARG 43 3.865 46.430 7.484 1.00 6.49 O ATOM 415 N SER 44 3.587 46.181 5.242 1.00 4.85 N ATOM 417 CA SER 44 4.587 47.183 4.830 1.00 4.85 C ATOM 418 CB SER 44 5.632 46.550 3.893 1.00 4.85 C ATOM 419 OG SER 44 6.705 47.440 3.623 1.00 4.85 O ATOM 421 C SER 44 3.902 48.392 4.158 1.00 4.85 C ATOM 422 O SER 44 3.284 48.253 3.091 1.00 4.85 O ATOM 423 N LYS 45 3.974 49.553 4.826 1.00 5.24 N ATOM 425 CA LYS 45 3.386 50.822 4.353 1.00 5.24 C ATOM 426 CG LYS 45 0.965 50.376 5.130 1.00 5.24 C ATOM 427 CD LYS 45 -0.154 50.875 6.037 1.00 5.24 C ATOM 428 CE LYS 45 -1.410 50.014 5.934 1.00 5.24 C ATOM 429 NZ LYS 45 -2.106 50.127 4.617 1.00 5.24 N ATOM 433 C LYS 45 4.442 51.934 4.334 1.00 5.24 C ATOM 434 O LYS 45 5.369 51.923 5.154 1.00 5.24 O ATOM 435 CB LYS 45 2.206 51.254 5.244 1.00 5.24 C TER END